Sed0002174 (gene) Chayote v1

Overview
NameSed0002174
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG05: 223099 .. 224564 (-)
RNA-Seq ExpressionSed0002174
SyntenySed0002174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGTCAAATTCGCAACAATGACACAAGATGCAGGCTTGGAAAGGACATGGATTGGGGGCTATGAACTCAAATTCGTGTCAGATCAGGTGCCTTTCTTGCAACCCATTTTTGTTTGTCTTTTTCCCAGTTAGATCTGTTTATTCATTCATTCAAGCATGAAAACTGTTGATTGTCCATATCTATTTAGCCAACATTTGAGCGTATCATTTCAACACAGAGACAGCCAATAATGCCACCCCACATCAGATGGACTGCTCAGAGTGGGCTTCACATGCCTCCCAGTGCCATTGCCTATTGCTCAGCCTCACTCACTGCTCACCGAATCCATTCATTTTGTCATATTGCTTTCTTACATTCTTTCTGTCGTTTCTTTAACCTTTTTGTGGCAGTGAGTTATCTCTTCAGTTTCTGATTTGCTTTTCTGAATGTTCAAGTACATAACCTTGAGATTTGTTCATGATTTATGATGAAGTTATGCAGTCTACACATATGGTCTAGTGATATCTACACCACCCCAAAACTTGACCTTGTTGTCTTTAGTCATACTAAATCAAAGATCAAAACTTTAAACTTAGATAACTTTGGGATATGAAGTGACATCAACTTCAACACTATATAGCCTCGCCATCCTTTGTCTCAAACTAAAATCGAGAAATTGTACCAATCATATTAGCCGCTCTATTTGGGTTGTCTGGACTTAGATATTTTGAGTAATTGGCTTTAGTTGATAACTATCCTTATGTCTCCATCAACGTGTTGTGAATCAGCACAATGGGGAGATCAGATTTGCTAGGGAAGCTGCGGTGCGAATAAAAGTGCACCAAATCCCACAGTTACTTCATAGATGTATTGGGAATATATTAAATGAATTGGACTCAACATAATTAAAACTTTTGGGTGATTTGATTTGGGTGAAAAGAAATTAGAAGTTCAAATTCCTAAACTATCAATTGTCTCCTTTATTTGAATTGATCGAAGAGGTCTGAATATTTAAACTTGATAACTTCATTTTAGTCGGACAACTTAGCCTTTTGAATTAATTTCTTATAATTTTATTTTGACAATCGAATGTTGTAAACTGAGATGGTTGTAAAGTGAAAATAATGGAGGTATTGAAAAATTAATTTCCTATGACTTTCCATGACACTTAACGCAAAGTGTTGTATGGTTAAATGATTGTCCTGTGAGTCTAGTGGGAGGTGCGGTTTGAAAAGAAAGTCGTAGATTGGTTGTGGAGTGCAGAGTTGTCAATATCAACTGGTGCATCATTTGACTTTGTACTCTCGATTTTGCAGGAGAAACTTCAAATCTAAAAGGCACATCAAAGCTCAACCACACACGTAGTCAAACAAACTGTGTATTGCGAGGTACCAACTCCATTGTACTTAATAATTAAAGGAAAGAAGTTAAGCATAAATTGCCAAGTATTCTTGGATGCTCTTTTCCGGATCCTGAAGCCTAA

mRNA sequence

ATGAACGTCAAATTCGCAACAATGACACAAGATGCAGGCTTGGAAAGGACATGGATTGGGGGCTATGAACTCAAATTCCCAACATTTGAGCGTATCATTTCAACACAGAGACAGCCAATAATGCCACCCCACATCAGATGGACTGCTCAGAGTGGGCTTCACATGCCTCCCAGAGAAACTTCAAATCTAAAAGGCACATCAAAGCTCAACCACACACGTAGTCAAACAAACTGTGTATTGCGAGTTAAGCATAAATTGCCAAGTATTCTTGGATGCTCTTTTCCGGATCCTGAAGCCTAA

Coding sequence (CDS)

ATGAACGTCAAATTCGCAACAATGACACAAGATGCAGGCTTGGAAAGGACATGGATTGGGGGCTATGAACTCAAATTCCCAACATTTGAGCGTATCATTTCAACACAGAGACAGCCAATAATGCCACCCCACATCAGATGGACTGCTCAGAGTGGGCTTCACATGCCTCCCAGAGAAACTTCAAATCTAAAAGGCACATCAAAGCTCAACCACACACGTAGTCAAACAAACTGTGTATTGCGAGTTAAGCATAAATTGCCAAGTATTCTTGGATGCTCTTTTCCGGATCCTGAAGCCTAA

Protein sequence

MNVKFATMTQDAGLERTWIGGYELKFPTFERIISTQRQPIMPPHIRWTAQSGLHMPPRETSNLKGTSKLNHTRSQTNCVLRVKHKLPSILGCSFPDPEA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002174.1Sed0002174.1mRNA