Sed0002151 (gene) Chayote v1

Overview


Name	Sed0002151
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein Ycf2
Location	LG02: 50270013 .. 50270369 (+)
RNA-Seq Expression	Sed0002151
Synteny	Sed0002151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA

mRNA sequence

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA

Coding sequence (CDS)

ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA

Protein sequence

MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGVH

Homology

[Close]

BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751528.1 (Ycf2 protein [Thladiantha dubia] >YP_009751546.1 Ycf2 protein [Thladiantha dubia] >QIT04009.1 Ycf2 protein [Thladiantha dubia] >QIT04027.1 Ycf2 protein [Thladiantha dubia])

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1944 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2003

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2004 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2060

[Close]

BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751696.1 (Ycf2 protein [Hodgsonia heteroclita] >YP_009751714.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04429.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04447.1 Ycf2 protein [Hodgsonia heteroclita])

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1942 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2001

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2002 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2058

[Close]

BLAST of Sed0002151 vs. NCBI nr
Match: QJA16206.1 (Ycf2 [Siraitia grosvenorii])

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1560 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 1619

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 1620 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 1676

[Close]

BLAST of Sed0002151 vs. NCBI nr
Match: YP_009945458.1 (Ycf2 [Sechium edule] >QOE55988.1 Ycf2 [Sechium edule])

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1944 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2003

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2004 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2060

[Close]

BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751949.1 (Ycf2 protein [Cyclanthera pedata] >YP_009751966.1 Ycf2 protein [Cyclanthera pedata] >QIT04767.1 Ycf2 protein [Cyclanthera pedata] >QIT04784.1 Ycf2 protein [Cyclanthera pedata] >QWQ50151.1 hypothetical protein RF2 [Cyclanthera pedata] >QWQ50152.1 hypothetical protein RF2 [Cyclanthera pedata])

HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1946 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2005

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2006 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2062

[Close]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q9B1K6 (Protein Ycf2 OS=Lotus japonicus OX=34305 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MK LTILLYLLSCSAG+V QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1955 MKNLTILLYLLSCSAGAVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALVGS 2014

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCS+FDNDRVTLLL     NPL+MIQNGSCSIVDQRFLYE+YESEFEEGEGV
Sbjct: 2015 SRTEKDCSQFDNDRVTLLLRPEPSNPLNMIQNGSCSIVDQRFLYEKYESEFEEGEGV 2071

[Close]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: A6MM80 (Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLW LPGPDEKN ITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1945 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNWITSYGLVENDSDLVHGLLEVEGALVGS 2004

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLLL +   NPLDM+QNGSCSIVDQRFLYE+YESEFEEGEG
Sbjct: 2005 SRTEKDCSQFDNDRVTLLLRSEPRNPLDMMQNGSCSIVDQRFLYEKYESEFEEGEG 2060

[Close]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q09FY5 (Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 103/116 (88.79%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYG VENDSDLVHGLLEVEG L+GS
Sbjct: 1948 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGFVENDSDLVHGLLEVEGVLVGS 2007

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLLL +   NPLDM+QNGSCSIVDQRFLYE+YESEFEEGEG
Sbjct: 2008 SRTEKDCSQFDNDRVTLLLRSEPRNPLDMMQNGSCSIVDQRFLYEKYESEFEEGEG 2063

[Close]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1962 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALVGS 2021

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLLL     NPLDM+QNGSCSIVDQRFLYE+YESEFEEG G
Sbjct: 2022 SRTEKDCSQFDNDRVTLLLRPEPRNPLDMMQNGSCSIVDQRFLYEKYESEFEEGAG 2077

[Close]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: A0A379 (Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.1e-54
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GS
Sbjct: 1943 MKKLTILLYLLSCSAGSVAQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALVGS 2002

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLLL     NPLDM+Q+GSCSI+DQRFLYE+YESEFEEGEG
Sbjct: 2003 SRTEKDCSQFDNDRVTLLLRPEPRNPLDMMQSGSCSILDQRFLYEKYESEFEEGEG 2058

[Close]

BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0ERQ9 (Protein Ycf2 OS=Hodgsonia heteroclita OX=386184 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1942 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2001

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2002 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2058

[Close]

BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0EQH0 (Protein Ycf2 OS=Sechium edule OX=184140 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1956 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2015

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2016 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2072

[Close]

BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6M3RTW0 (Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1950 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2009

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2010 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2066

[Close]

BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6M3RVM4 (Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1944 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2003

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2004 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2060

[Close]

BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0ESN1 (Protein Ycf2 OS=Cyclanthera pedata OX=198836 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS
Sbjct: 1946 MKKLTILLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 2005

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 118
            SRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV
Sbjct: 2006 SRTEKDCSRFDNDRVTLLLRPEPRNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGV 2062

[Close]

BLAST of Sed0002151 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50
Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKK TILLYLLSCSAGSV QDLW LP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GS
Sbjct: 1956 MKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITSYGFVENDSDLVHGLLEVQGALVGS 2015

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLL  +   +PL M+Q+GSCSIVDQRFLYE+YESEFEEGEG
Sbjct: 2016 SRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEG 2071

[Close]

BLAST of Sed0002151 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50
Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 1    MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGS 60
            MKK TILLYLLSCSAGSV QDLW LP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GS
Sbjct: 1956 MKKFTILLYLLSCSAGSVAQDLWSLPVPDEKNRITSYGFVENDSDLVHGLLEVQGALVGS 2015

Query: 61   SRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEG 117
            SRTEKDCS+FDNDRVTLL  +   +PL M+Q+GSCSIVDQRFLYE+YESEFEEGEG
Sbjct: 2016 SRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEG 2071

The following BLAST results are available for this feature:

BLAST of Sed0002151 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009751528.1	7.9e-55	94.87	Ycf2 protein [Thladiantha dubia] >YP_009751546.1 Ycf2 protein [Thladiantha dubia...	[more]
YP_009751696.1	7.9e-55	94.87	Ycf2 protein [Hodgsonia heteroclita] >YP_009751714.1 Ycf2 protein [Hodgsonia het...	[more]
QJA16206.1	7.9e-55	94.87	Ycf2 [Siraitia grosvenorii]	[more]
YP_009945458.1	7.9e-55	94.87	Ycf2 [Sechium edule] >QOE55988.1 Ycf2 [Sechium edule]	[more]
YP_009751949.1	7.9e-55	94.87	Ycf2 protein [Cyclanthera pedata] >YP_009751966.1 Ycf2 protein [Cyclanthera peda...	[more]

BLAST of Sed0002151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9B1K6	1.4e-54	88.89	Protein Ycf2 OS=Lotus japonicus OX=34305 GN=ycf2-A PE=3 SV=1	[more]
A6MM80	2.4e-54	89.66	Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1	[more]
Q09FY5	2.4e-54	88.79	Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	2.4e-54	89.66	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
A0A379	4.1e-54	88.79	Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1	[more]

BLAST of Sed0002151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0ERQ9	3.8e-55	94.87	Protein Ycf2 OS=Hodgsonia heteroclita OX=386184 GN=ycf2 PE=3 SV=1	[more]
A0A6H0EQH0	3.8e-55	94.87	Protein Ycf2 OS=Sechium edule OX=184140 GN=ycf2 PE=3 SV=1	[more]
A0A6M3RTW0	3.8e-55	94.87	Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1	[more]
A0A6M3RVM4	3.8e-55	94.87	Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ESN1	3.8e-55	94.87	Protein Ycf2 OS=Cyclanthera pedata OX=198836 GN=ycf2 PE=3 SV=1	[more]

BLAST of Sed0002151 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	1.6e-50	82.76	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	1.6e-50	82.76	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 1..116
None	No IPR available	PANTHER	PTHR33078:SF55	PROTEIN YCF2	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002151.1	Sed0002151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity