
Sed0002151 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGAGAAGGGGTCCACTGA MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESEFEEGEGVH Homology
BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751528.1 (Ycf2 protein [Thladiantha dubia] >YP_009751546.1 Ycf2 protein [Thladiantha dubia] >QIT04009.1 Ycf2 protein [Thladiantha dubia] >QIT04027.1 Ycf2 protein [Thladiantha dubia]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751696.1 (Ycf2 protein [Hodgsonia heteroclita] >YP_009751714.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04429.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04447.1 Ycf2 protein [Hodgsonia heteroclita]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. NCBI nr
Match: QJA16206.1 (Ycf2 [Siraitia grosvenorii]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. NCBI nr
Match: YP_009945458.1 (Ycf2 [Sechium edule] >QOE55988.1 Ycf2 [Sechium edule]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. NCBI nr
Match: YP_009751949.1 (Ycf2 protein [Cyclanthera pedata] >YP_009751966.1 Ycf2 protein [Cyclanthera pedata] >QIT04767.1 Ycf2 protein [Cyclanthera pedata] >QIT04784.1 Ycf2 protein [Cyclanthera pedata] >QWQ50151.1 hypothetical protein RF2 [Cyclanthera pedata] >QWQ50152.1 hypothetical protein RF2 [Cyclanthera pedata]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q9B1K6 (Protein Ycf2 OS=Lotus japonicus OX=34305 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54 Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: A6MM80 (Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54 Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q09FY5 (Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54 Identity = 103/116 (88.79%), Postives = 108/116 (93.10%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54 Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy Swiss-Prot
Match: A0A379 (Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 4.1e-54 Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0ERQ9 (Protein Ycf2 OS=Hodgsonia heteroclita OX=386184 GN=ycf2 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0EQH0 (Protein Ycf2 OS=Sechium edule OX=184140 GN=ycf2 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6M3RTW0 (Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6M3RVM4 (Protein Ycf2 OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ycf2 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. ExPASy TrEMBL
Match: A0A6H0ESN1 (Protein Ycf2 OS=Cyclanthera pedata OX=198836 GN=ycf2 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 111/117 (94.87%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Sed0002151 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50 Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 0
BLAST of Sed0002151 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 196.1 bits (497), Expect = 1.6e-50 Identity = 96/116 (82.76%), Postives = 104/116 (89.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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