Sed0002058 (gene) Chayote v1

Overview


Name	Sed0002058
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Fe(3+) dicitrate transport system permease
Location	LG12: 27358501 .. 27362728 (-)
RNA-Seq Expression	Sed0002058
Synteny	Sed0002058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATCAGAATTAAATCATGTAGGCTTGGGTACAAACGAAGATATTTGCTACAAAATTTTCCCGATGAGAAATTCTCACATTTTCAGTGTTGGATCTGTCTCAGATTCCGTTCCGGCGAGTTGAAACTCTAGGCGACGGCGGCGATTTCTCTCCCTACGGCGGCGGGCTGGTTTCGATTGGTAGCCAAATGGAAGGATTTAGTGCAGAAGATCTGTCCACAATCGGAGGAATTGCGACGGTGTCGCTTCTCCATTCCTTCATTCCCACTCACTGGCTCCCTTTCTCCGTCGTCGGCCGCGTCCAGAAATGGACTCTCTCCAGAACTCTTCTCGTCAGTATGTTCTCTGCAATCCGATCCTATTTCTATGATCTCTTGTTTCGCGAGTTTCTTGCTGAATTTGTTTGAATGTTGCTCTGAGTAGCTTCTGTGAGGGTTATTGTAATTAGAGGAAGATTTTTTGTGCTGCAACTGATTTATCAAAATGCTGTTGGATTTGATTGTTGTTTCTAGCTGTTTCTTGTTTGGTGTTACTGTGACAATGCTGTTTTAATTTTGATAATTAAAACAATATAACATACTTCAAAAGTTAATATGTAAAACTTTCAAGTTTATGCATAGATGAATAGTATGTATTTCTTGTTTGGTCTGTTTTAATTTTAATTTTGATAATGACCTTTATTTCTTCAATGTATAGATGAGTTTGATGTAAAACACTTGTCAAAATTGTCTGTTTCCTATCAATTTTTTTTTTCTGGTAGTGTTGTTGAAGCCATAGTTCTTAGTGAGTCTTTTGAGGATTAGAGGCTGGAGAGGGTGAACTATATATCTTTATTAGCTTAGTTTTTTTTTTGAAACAATGGTAACCACGCCTGTCTCTAGGCCAGGCACCGGGAGACATCTGCCACCCTTTGGGGACTCTTTATTAGCTTAGTTAAGATTGTTATAAACACTTTTTCAATCATATTTCAGAATGAGTCCATATAGTATGCTTATCATTCTGCTGCGTTGATACTGCGTTTAACGTGCTTTATACTCTTTTTGTTGATCTTGATGTTTACTCGGGTGGTGTGTAGAACTAGATAATGATAAAACCTTTTCTTCTTTTGATAATCGGGAATTGGAGGTTCATCTCACTACAGGGCACTCGTGCCTGTTCCTGACTCGAGAGATAATAAGAGATTTTACAATTAAACTCAATTCGTGAGTTTCGAACGTGTGACCTTCATAAAAGCATACCTTTCAGACCTCAAGTTTCTACCAACAAGACCGCCCTTGGAGACTCCTAAAATTGCTCCAAGTTTAGTATGGGTAACTTTCAAATTCATATGATTGAGCCACCACAAAAGAAGGGGCACCTTGTTAATAAAACTTCGTATCTAGAATAATTGTAAAACTCAGTCGGTATTTTTAGGGCATGAATGTAACCTGAATTGCACAGTTTGGCCAATGCTCAGTTAGTTTGGACTTTGGTCAGTTGGAGATTTAACTTTTGTCAATTGATTAATCTCAGGGTCGCAAATGACCAAGATGTCAGAAATTGGATTATAGACTATAATGATAAAAAGAACATGCAATTTGTTTATTTAATTTAGAAGCTGCGCTGCACATGTATTTTGTTATCTTACAAAATGCTAGGGAGTGATGTTTAGTGTATTTTAATTTTTAGCCTCAGAATGCTTGCAATTGAAAATCTTATGTTTAGGTGCATATTTGATTTTGCAGCTGCCTTTGGAGCAATTTTGCATGTGATATCTACTTCACTTCTTGGAATAACAGCAATCACAATGGCTAATACAATTGCTGGTGAAGAAACTGTGCACAAGCTGGCTTCCCTTTTGCTTATAATTCTTGGAGGTTGTTATGTTTTATTGTATATGACTGGAAGAGGTAGTCATAGCCACTCCCACAACCAACCAATGGAGAAAATGGCTGTTGCTGGTCTTGTTCTTGTACCTGCTTTATCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCGTCTTCCATGATGGTGCTCGCTATCATAGTGCTGCTATTCAGGTATCTCCTGTCTAGGCATAAAACGTCCTTGCATGATGTACATTTTGCAGCTTTTTTTCTGGTAGAAAGAAACCAACTTTTTAGAAGATAAGCGGATTGAAGGAAGTGGAGGTTGCCTGAAAAAAATGATTACTAAGTCGCCTAAGTCAAACAGGGGACTGCACAAGAAAAAAAATTACCAGACAATTTCAATGGACATTAGTTACATTGGCGTTAGCCTAAACAGAGATATTAAAAAAAATGTTAAAGTTCACACTTCATCTTGCAAGATTTCACTACACAACATCAATATCTATTCCTAACCCTTTCCTTCCAAATATTCTAGAAAATTGAGGAAAACCCAATCTTGGCTTCTCTGTTGAGGAGCGAACTAGAAACGAAAAAGTTGAGATAAATTATCTCCAAATATTGCAGTTGAATGGGCAAAGCCATAAGAAATGACCGTTATCTTCAGCCCTTAGCTTAAATGAAACATTTCATTAGAGACGAAGTGCCATAGAATATCTTTGGTTCTGACCCGCTAAGAGCAATGATCATAGGGATGAACGAAGAATCTATAAATGTCTTTGGAAATTTGGACTTTATAGGACTAAAACCCAAACATGGACTACCCTTAAAACTGGATAGAGGTTAATTCCTTGGAATGTACTAAGGAGGGAAAAGCCTGTCTACAAAATAGAAGTTTAAAGAACAAGTTTTTTTTTTAGGAAACGAAAACCTTCATTGATGAATGATAAGTTACAATTCTATCGGAAAAATTACAAAAAATTATGCCACTGAGATATTAAAGTATGCTCCCTTCAAGGTCTCAGGTTCGAGACTCACCTGTGACATTACTTGTTCTATGTCTACGGTGTCTAGCCTAGGGACGGGCCTGATTACCCTTGTTTCAAAACTCTTTAATTTGCAATCGTGCTAGAACATCCTATTGTTACGCTCCCTCCACCAAGTTCAGAAAAAAGCATAAATGATGTTGCTCCATAGGATTCAAAGAACAAATTCTCACAGAACATCTTTTTTCTTGAGGAATCACATACATACAACAGGATTGAAGGGATGTACGGTCCAATCAAATATTTTCCTAGAAGCGAATGTGATTCCCTTCCCCCAATTGAATATTTTGAGGATTTGAGAAAAGTCTAAAGGACAAGTGAGAGATGCTTTATTTGAAATGGTATTAATGGAAACGGCAGCACACCCCAGCTCTTAGCGTGGAGCGAGCCATACTTATGAGAATTTGATGTCGAAGTGTGGAGTTTTGGAGGAAAATGCCACAATCATCTGTACATTATGCGACTGTTGAAAGCCTCAAAGAAAGTTGGCATGTCCTCTTGATCAGGGATACATATCTCAACCAGTTAAGTTATGTTTAGGTTGACCCTAACTTTTGCATTTAAATTGGACATATCAATAACACTAATGTTTTTGAATTAGTGATTTATTTAATTATTTCATAACATTTTATCACAAAGTTTAAGCGGTTTCAAACCAATCATATAAATTGGACATACCGATGTTACCTAAGAACGCCGTGTTTAAAAAACCATTCATGTGATGATTCCATCCTTTTTTTTTTTTATGATGAAACATTCCATGCATATTAATAAGAATGCAGTTTTAAATCTATGGTTCATTTCAGTTACACATAGCTTGGCTCTGTTGTTTTGGATTTGCAGCACAATAACTGTAATGACTTCATTGGTGGCTTTGTCATTCTACGGCGCCAGCCAGCTGAAGTTTCACTGGGTCGAACGATACGACAAACTTCTTGTAGGTTCAGTGTTGTGCATGGTAGGTATCCTGACACTCATTTTTCACGACCACGACCACGAACATCACGGGCATGCAGGTTCCATAGGAGACAATTTGCATAGGAAAGTTATTGCACTTTGAGGATTTATATGATCTTATCCTGCAGATATAACTTCAAGTGGGTTTAAAGGTCAGTTTCTTGTATTCCTTTATTGCCATTTTGTCACATTTAAGAATCCTTTTATGTATGATTAATATAGAAGCTTAACATCCCGCTTCGTCACTTGCCATAGACTTCTATGTTTAAGTTTTCGGTGTTCGAATGTTTTTTAATTTTTTTTTTTTTTTTTGCTTTCCCTTTTCAAATGAAAATGTAATATGATCTTTTACCCTCTCCCTCTTTTCATAGAGAATCTCAAG

mRNA sequence

AAAAAAAATCAGAATTAAATCATGTAGGCTTGGGTACAAACGAAGATATTTGCTACAAAATTTTCCCGATGAGAAATTCTCACATTTTCAGTGTTGGATCTGTCTCAGATTCCGTTCCGGCGAGTTGAAACTCTAGGCGACGGCGGCGATTTCTCTCCCTACGGCGGCGGGCTGGTTTCGATTGGTAGCCAAATGGAAGGATTTAGTGCAGAAGATCTGTCCACAATCGGAGGAATTGCGACGGTGTCGCTTCTCCATTCCTTCATTCCCACTCACTGGCTCCCTTTCTCCGTCGTCGGCCGCGTCCAGAAATGGACTCTCTCCAGAACTCTTCTCGTCACTGCCTTTGGAGCAATTTTGCATGTGATATCTACTTCACTTCTTGGAATAACAGCAATCACAATGGCTAATACAATTGCTGGTGAAGAAACTGTGCACAAGCTGGCTTCCCTTTTGCTTATAATTCTTGGAGGTTGTTATGTTTTATTGTATATGACTGGAAGAGGTAGTCATAGCCACTCCCACAACCAACCAATGGAGAAAATGGCTGTTGCTGGTCTTGTTCTTGTACCTGCTTTATCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCGTCTTCCATGATGGTGCTCGCTATCATAGTGCTGCTATTCAGCACAATAACTGTAATGACTTCATTGGTGGCTTTGTCATTCTACGGCGCCAGCCAGCTGAAGTTTCACTGGGTCGAACGATACGACAAACTTCTTGTAGGTTCAGTGTTGTGCATGGTAGGTATCCTGACACTCATTTTTCACGACCACGACCACGAACATCACGGGCATGCAGGTTCCATAGGAGACAATTTGCATAGGAAAGTTATTGCACTTTGAGGATTTATATGATCTTATCCTGCAGATATAACTTCAAGTGGGTTTAAAGGTCAGTTTCTTGTATTCCTTTATTGCCATTTTGTCACATTTAAGAATCCTTTTATGTATGATTAATATAGAAGCTTAACATCCCGCTTCGTCACTTGCCATAGACTTCTATGTTTAAGTTTTCGGTGTTCGAATGTTTTTTAATTTTTTTTTTTTTTTTTGCTTTCCCTTTTCAAATGAAAATGTAATATGATCTTTTACCCTCTCCCTCTTTTCATAGAGAATCTCAAG

Coding sequence (CDS)

ATGGAAGGATTTAGTGCAGAAGATCTGTCCACAATCGGAGGAATTGCGACGGTGTCGCTTCTCCATTCCTTCATTCCCACTCACTGGCTCCCTTTCTCCGTCGTCGGCCGCGTCCAGAAATGGACTCTCTCCAGAACTCTTCTCGTCACTGCCTTTGGAGCAATTTTGCATGTGATATCTACTTCACTTCTTGGAATAACAGCAATCACAATGGCTAATACAATTGCTGGTGAAGAAACTGTGCACAAGCTGGCTTCCCTTTTGCTTATAATTCTTGGAGGTTGTTATGTTTTATTGTATATGACTGGAAGAGGTAGTCATAGCCACTCCCACAACCAACCAATGGAGAAAATGGCTGTTGCTGGTCTTGTTCTTGTACCTGCTTTATCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCGTCTTCCATGATGGTGCTCGCTATCATAGTGCTGCTATTCAGCACAATAACTGTAATGACTTCATTGGTGGCTTTGTCATTCTACGGCGCCAGCCAGCTGAAGTTTCACTGGGTCGAACGATACGACAAACTTCTTGTAGGTTCAGTGTTGTGCATGGTAGGTATCCTGACACTCATTTTTCACGACCACGACCACGAACATCACGGGCATGCAGGTTCCATAGGAGACAATTTGCATAGGAAAGTTATTGCACTTTGA

Protein sequence

MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

Homology

[Close]

BLAST of Sed0002058 vs. NCBI nr
Match: XP_022961278.1 (uncharacterized protein LOC111461823 [Cucurbita moschata] >XP_023516960.1 uncharacterized protein LOC111780716 [Cucurbita pepo subsp. pepo] >KAG7022348.1 hypothetical protein SDJN02_16079 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430.6 bits (1106), Expect = 8.3e-117
Identity = 219/230 (95.22%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GSIGDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. NCBI nr
Match: KAG6590249.1 (60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.6 bits (1106), Expect = 8.3e-117
Identity = 219/230 (95.22%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 149 MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 208

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 209 TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 268

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 269 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 328

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GSIGDNLHRK+I L
Sbjct: 329 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 378

[Close]

BLAST of Sed0002058 vs. NCBI nr
Match: XP_022988201.1 (uncharacterized protein LOC111485510 [Cucurbita maxima])

HSP 1 Score: 429.1 bits (1102), Expect = 2.4e-116
Identity = 218/230 (94.78%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFH+H+H+HHGH GSIGDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHEHEHDHHGHGGSIGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. NCBI nr
Match: XP_038878584.1 (uncharacterized protein LOC120070772 [Benincasa hispida])

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 220/230 (95.65%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLIILG CYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGACYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GSIGDNL RK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLPRKIIVL 230

[Close]

BLAST of Sed0002058 vs. NCBI nr
Match: XP_004144097.1 (uncharacterized protein LOC101203325 [Cucumis sativus] >KGN66409.1 hypothetical protein Csa_007075 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115
Identity = 218/230 (94.78%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+MTGRGSHSHS NQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSQNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GS+GDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSVGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. ExPASy TrEMBL
Match: A0A6J1HBC5 (uncharacterized protein LOC111461823 OS=Cucurbita moschata OX=3662 GN=LOC111461823 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.0e-117
Identity = 219/230 (95.22%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GSIGDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSIGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. ExPASy TrEMBL
Match: A0A6J1JGK2 (uncharacterized protein LOC111485510 OS=Cucurbita maxima OX=3661 GN=LOC111485510 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 218/230 (94.78%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTGEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLIVLGGCYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMILAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFH+H+H+HHGH GSIGDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHEHEHDHHGHGGSIGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. ExPASy TrEMBL
Match: A0A0A0LZF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600990 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 218/230 (94.78%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+MTGRGSHSHS NQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSQNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H+HHGH GS+GDNLHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHDHHGHGGSVGDNLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. ExPASy TrEMBL
Match: A0A5D3CFB8 (Stage II sporulation protein E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00340 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 217/230 (94.35%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H  HGH GS+GD LHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHNQHGHGGSVGDTLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. ExPASy TrEMBL
Match: A0A1S3BQP9 (uncharacterized protein LOC103492468 OS=Cucumis melo OX=3656 GN=LOC103492468 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 217/230 (94.35%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS
Sbjct: 1   MEGFTAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+MTGRGSHSHSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHQLASLLLIILGACYVLLFMTGRGSHSHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTLIFHDH+H  HGH GS+GD LHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCVVGILTLIFHDHEHNQHGHGGSVGDTLHRKIIVL 230

[Close]

BLAST of Sed0002058 vs. TAIR 10
Match: AT5G21070.1 (unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 381.3 bits (978), Expect = 5.4e-106
Identity = 198/230 (86.09%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 1   MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVIS 60
           M+ F+AEDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHVIS
Sbjct: 1   MDTFTAEDLSTIGGIATVSLLHSFIPTHWLPFSIVGRAQKWTLSRTLLVTAFGAVLHVIS 60

Query: 61  TSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHSHNQPMEKMAV 120
           TSLLGITAITMANTIAGEETVHKLASLLL+ LGG YVLL++ G+G H+HSHNQPMEKMAV
Sbjct: 61  TSLLGITAITMANTIAGEETVHKLASLLLVFLGGSYVLLFLAGKGGHTHSHNQPMEKMAV 120

Query: 121 AGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKF 180
           AGLVLVPALSPCATTLPVFLAVGNS SMMVLAIIVLLFSTI VMTSLVALSFYGASQLKF
Sbjct: 121 AGLVLVPALSPCATTLPVFLAVGNSKSMMVLAIIVLLFSTILVMTSLVALSFYGASQLKF 180

Query: 181 HWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIGDNLHRKVIAL 231
           HWVERYDKLLVGSVLC+VGILTL+FHDHD     H G     LHRK+I L
Sbjct: 181 HWVERYDKLLVGSVLCLVGILTLLFHDHD-----HGGHEAHQLHRKIITL 225

The following BLAST results are available for this feature:

BLAST of Sed0002058 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961278.1	8.3e-117	95.22	uncharacterized protein LOC111461823 [Cucurbita moschata] >XP_023516960.1 unchar...	[more]
KAG6590249.1	8.3e-117	95.22	60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022988201.1	2.4e-116	94.78	uncharacterized protein LOC111485510 [Cucurbita maxima]	[more]
XP_038878584.1	1.2e-115	95.65	uncharacterized protein LOC120070772 [Benincasa hispida]	[more]
XP_004144097.1	2.7e-115	94.78	uncharacterized protein LOC101203325 [Cucumis sativus] >KGN66409.1 hypothetical ...	[more]

BLAST of Sed0002058 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002058 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBC5	4.0e-117	95.22	uncharacterized protein LOC111461823 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A6J1JGK2	1.2e-116	94.78	uncharacterized protein LOC111485510 OS=Cucurbita maxima OX=3661 GN=LOC111485510...	[more]
A0A0A0LZF1	1.3e-115	94.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600990 PE=4 SV=1	[more]
A0A5D3CFB8	1.1e-114	94.35	Stage II sporulation protein E OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BQP9	1.1e-114	94.35	uncharacterized protein LOC103492468 OS=Cucumis melo OX=3656 GN=LOC103492468 PE=...	[more]

BLAST of Sed0002058 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21070.1	5.4e-106	86.09	unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; B...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36394	OS01G0277700 PROTEIN	coord: 1..230
None	No IPR available	PANTHER	PTHR36394:SF2	BNAC09G36810D PROTEIN	coord: 1..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002058.1	Sed0002058.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane