Sed0002037 (gene) Chayote v1

Overview


Name	Sed0002037
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SBP (S-ribonuclease binding protein) family protein
Location	LG05: 42205630 .. 42207366 (-)
RNA-Seq Expression	Sed0002037
Synteny	Sed0002037

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCTCGTTTCTTTCCCGAAATTACGGGATTGACCAGATCTCTGTTTGTTTTGCTTTTACCTATAAATACAACGCCCAGATTAAATAAATCTCCCGAATTCATTATTTATATATATATATACATATATATATATGTTGGTTCATTTCATCTCTTCGTTTTCTTCAACACTCTGCACACAGAAAACCTAAATTTCAAGTTCCGAGAAGAAAAGTTATCGATTCGTTTCAGTGATTGAAGGAAAAAAAAACAAGAACAATTAGAAGAAGAAAAGCCAGCGATCGGTTTCGATTTTGTGTGTGATCGATTAGTATTATGTGAAATTGGTTCTTTCTGAGAGAGATTATGGGATTCGGAGCGCCATTGACAGGTTTCAGCGATAATGCTGCAGCGGCAGAGACGACTCTGCTTCCGCCGTACAACTCTGTAGCGATTAATTCGTTTCCGGCGACGACGATGGCGACGGCGGCGGCGGCGGCCGCTGTTATGAAGTCTGATAGCGGTATTACTTATAACCTTCCGATTCCGAGGAAGCGCGCTAGAGATCATTCTTCGATGAATCAGTTCGTGTCGTCTGCTCCTTCTCGGAAGATCTGTGGATGTAGTGATAATAATTTCTATTTTCTGGGCGAGGATTTCTCCATCCAAATTCAACAGCAGCAGTTGGATCTGGATCGGTTGATATCGCTACATGTACGGTACTAATCGCTGTTTAATTTCTTGCTTAATCTGTTCATAGTGCGAATAGATGTGGCTGAATAGAGAGTTGCGATTGTGAAATTTACCTGTGTTGTTTGTGTGATTTTTGGAAGCAGATGGAGAAGGTGAGAGTAGAAGTAGAGGAGAAACGGAGGAAACATGCGAGGAGGATTGTGGAGGCGATAGAATTAGGGATGATGAGGATATTGAGGAGCAGAGAGGAGGAAATCGAGAAGATCGGTAAATTGAACTGCGAACTGGAAGAGCGAGTGAATTATCTCTGCGTGGAGAATCAGCTATGGCGCGATGTGGCTCACACGAACGAGGCCACCGCCAATGCTCTCCGGAGCAACCTGGAACAAGTGCTTTCGGTAGAACAGGTGAGAAACGAAGACAACCACCACCACGACGGCGGCGGCGGCGCCGACGAGGCAGAGTCCTGCTGCGGCGGAAACTACGAGGATTTGGAAGATCGGAAGAGAAAAGAGGATCGACGGTGTAGAAACTGTTGGAAAGAAGAATCGTGCGTGCTGCTGTTGCCATGCAGGCATCTGTGTTTGTGTACAGTTTGTGGATCGTCGCTTCAAACCTGTCCGATCTGCAACTCTACCAATAATGCCAGTGTTCGTGTAATCATGCCTTAGCAACTCTTTCATTTCATTTCATTTCAATCCAATTCTTCCTCAACTTTTTGTTCTTTCTGTGTTAGGTGCTGGATTCAACATTTTGTTGAAGTTAAATATCCTTTTTGTTCGTTCTTTCATTTTTTTTTATATCTTTTAAATGCAACTTTGAGTATTTCAGCTTTTCGCATCTTTTTTAAGGAACCACAATCAAATACTACCGATTTTCAGAATATATGGCATTTAAATCTTAGGTAATTATGTTAGGTTTGGAACTCTATTAATTGAGAAAATGTTGTTTCTTATGATCAGTAACGTTCTTCTTCAAAAGCAATCTCGTAATTCCAATATGTATATTTGGAATTGCTTTCATTCTAATTCCTTTTGCATAGTCATTGATTTACCATATAAGGGCGT

mRNA sequence

GCCCTCGTTTCTTTCCCGAAATTACGGGATTGACCAGATCTCTGTTTGTTTTGCTTTTACCTATAAATACAACGCCCAGATTAAATAAATCTCCCGAATTCATTATTTATATATATATATACATATATATATATGTTGGTTCATTTCATCTCTTCGTTTTCTTCAACACTCTGCACACAGAAAACCTAAATTTCAAGTTCCGAGAAGAAAAGTTATCGATTCGTTTCAGTGATTGAAGGAAAAAAAAACAAGAACAATTAGAAGAAGAAAAGCCAGCGATCGGTTTCGATTTTGTGTGTGATCGATTAGTATTATGTGAAATTGGTTCTTTCTGAGAGAGATTATGGGATTCGGAGCGCCATTGACAGGTTTCAGCGATAATGCTGCAGCGGCAGAGACGACTCTGCTTCCGCCGTACAACTCTGTAGCGATTAATTCGTTTCCGGCGACGACGATGGCGACGGCGGCGGCGGCGGCCGCTGTTATGAAGTCTGATAGCGGTATTACTTATAACCTTCCGATTCCGAGGAAGCGCGCTAGAGATCATTCTTCGATGAATCAGTTCGTGTCGTCTGCTCCTTCTCGGAAGATCTGTGGATGTAGTGATAATAATTTCTATTTTCTGGGCGAGGATTTCTCCATCCAAATTCAACAGCAGCAGTTGGATCTGGATCGGTTGATATCGCTACATATGGAGAAGGTGAGAGTAGAAGTAGAGGAGAAACGGAGGAAACATGCGAGGAGGATTGTGGAGGCGATAGAATTAGGGATGATGAGGATATTGAGGAGCAGAGAGGAGGAAATCGAGAAGATCGGTAAATTGAACTGCGAACTGGAAGAGCGAGTGAATTATCTCTGCGTGGAGAATCAGCTATGGCGCGATGTGGCTCACACGAACGAGGCCACCGCCAATGCTCTCCGGAGCAACCTGGAACAAGTGCTTTCGGTAGAACAGGTGAGAAACGAAGACAACCACCACCACGACGGCGGCGGCGGCGCCGACGAGGCAGAGTCCTGCTGCGGCGGAAACTACGAGGATTTGGAAGATCGGAAGAGAAAAGAGGATCGACGGTGTAGAAACTGTTGGAAAGAAGAATCGTGCGTGCTGCTGTTGCCATGCAGGCATCTGTGTTTGTGTACAGTTTGTGGATCGTCGCTTCAAACCTGTCCGATCTGCAACTCTACCAATAATGCCAGTGTTCGTGTAATCATGCCTTAGCAACTCTTTCATTTCATTTCATTTCAATCCAATTCTTCCTCAACTTTTTGTTCTTTCTGTGTTAGGTGCTGGATTCAACATTTTGTTGAAGTTAAATATCCTTTTTGTTCGTTCTTTCATTTTTTTTTATATCTTTTAAATGCAACTTTGAGTATTTCAGCTTTTCGCATCTTTTTTAAGGAACCACAATCAAATACTACCGATTTTCAGAATATATGGCATTTAAATCTTAGGTAATTATGTTAGGTTTGGAACTCTATTAATTGAGAAAATGTTGTTTCTTATGATCAGTAACGTTCTTCTTCAAAAGCAATCTCGTAATTCCAATATGTATATTTGGAATTGCTTTCATTCTAATTCCTTTTGCATAGTCATTGATTTACCATATAAGGGCGT

Coding sequence (CDS)

ATGGGATTCGGAGCGCCATTGACAGGTTTCAGCGATAATGCTGCAGCGGCAGAGACGACTCTGCTTCCGCCGTACAACTCTGTAGCGATTAATTCGTTTCCGGCGACGACGATGGCGACGGCGGCGGCGGCGGCCGCTGTTATGAAGTCTGATAGCGGTATTACTTATAACCTTCCGATTCCGAGGAAGCGCGCTAGAGATCATTCTTCGATGAATCAGTTCGTGTCGTCTGCTCCTTCTCGGAAGATCTGTGGATGTAGTGATAATAATTTCTATTTTCTGGGCGAGGATTTCTCCATCCAAATTCAACAGCAGCAGTTGGATCTGGATCGGTTGATATCGCTACATATGGAGAAGGTGAGAGTAGAAGTAGAGGAGAAACGGAGGAAACATGCGAGGAGGATTGTGGAGGCGATAGAATTAGGGATGATGAGGATATTGAGGAGCAGAGAGGAGGAAATCGAGAAGATCGGTAAATTGAACTGCGAACTGGAAGAGCGAGTGAATTATCTCTGCGTGGAGAATCAGCTATGGCGCGATGTGGCTCACACGAACGAGGCCACCGCCAATGCTCTCCGGAGCAACCTGGAACAAGTGCTTTCGGTAGAACAGGTGAGAAACGAAGACAACCACCACCACGACGGCGGCGGCGGCGCCGACGAGGCAGAGTCCTGCTGCGGCGGAAACTACGAGGATTTGGAAGATCGGAAGAGAAAAGAGGATCGACGGTGTAGAAACTGTTGGAAAGAAGAATCGTGCGTGCTGCTGTTGCCATGCAGGCATCTGTGTTTGTGTACAGTTTGTGGATCGTCGCTTCAAACCTGTCCGATCTGCAACTCTACCAATAATGCCAGTGTTCGTGTAATCATGCCTTAG

Protein sequence

MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPIPRKRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYEDLEDRKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSLQTCPICNSTNNASVRVIMP

Homology

[Close]

BLAST of Sed0002037 vs. NCBI nr
Match: XP_023532102.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.4 bits (1012), Expect = 8.3e-106
Identity = 226/334 (67.66%), Postives = 248/334 (74.25%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPI 60
           MG+GAPLTGFS NAAAAETTLLPPYN +AI+SFP    A AA+ AA +KSDSGITYNLPI
Sbjct: 1   MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFP---KAAAASTAAGLKSDSGITYNLPI 60

Query: 61  PRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHM 120
           PRKRARDHS++N+FV   S A  +K CGC   N  FLGED S Q QQQQ DLDRLIS HM
Sbjct: 61  PRKRARDHSTINRFVSHPSPAHFQKNCGC---NHDFLGEDISNQFQQQQFDLDRLISQHM 120

Query: 121 EKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQL 180
           EKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E Q+
Sbjct: 121 EKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCMETQI 180

Query: 181 WRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAESCCG 240
           WRDVA TNEATANALRSNLEQVLS  QV+N D   H G G           AD+AESCCG
Sbjct: 181 WRDVAQTNEATANALRSNLEQVLS--QVKNND---HQGAGFEDPTTTAAVAADDAESCCG 240

Query: 241 GNYEDLED------------------------------RKRKEDRRCRNCWKEESCVLLL 292
            NY+D +D                              RK  EDR C+NCWKEESCVLLL
Sbjct: 241 SNYDDDDDDRKQANHGRWRNLNEEVEESEERNRRGRKARKGNEDRWCKNCWKEESCVLLL 300

[Close]

BLAST of Sed0002037 vs. NCBI nr
Match: XP_023532101.1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.8 bits (1000), Expect = 2.0e-104
Identity = 226/335 (67.46%), Postives = 248/335 (74.03%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPI 60
           MG+GAPLTGFS NAAAAETTLLPPYN +AI+SFP    A AA+ AA +KSDSGITYNLPI
Sbjct: 1   MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFP---KAAAASTAAGLKSDSGITYNLPI 60

Query: 61  PRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLH- 120
           PRKRARDHS++N+FV   S A  +K CGC   N  FLGED S Q QQQQ DLDRLIS H 
Sbjct: 61  PRKRARDHSTINRFVSHPSPAHFQKNCGC---NHDFLGEDISNQFQQQQFDLDRLISQHQ 120

Query: 121 MEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQ 180
           MEKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E Q
Sbjct: 121 MEKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCMETQ 180

Query: 181 LWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAESCC 240
           +WRDVA TNEATANALRSNLEQVLS  QV+N D   H G G           AD+AESCC
Sbjct: 181 IWRDVAQTNEATANALRSNLEQVLS--QVKNND---HQGAGFEDPTTTAAVAADDAESCC 240

Query: 241 GGNYEDLED------------------------------RKRKEDRRCRNCWKEESCVLL 292
           G NY+D +D                              RK  EDR C+NCWKEESCVLL
Sbjct: 241 GSNYDDDDDDRKQANHGRWRNLNEEVEESEERNRRGRKARKGNEDRWCKNCWKEESCVLL 300

[Close]

BLAST of Sed0002037 vs. NCBI nr
Match: KAG6604725.1 (putative BOI-related E3 ubiquitin-protein ligase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.0 bits (998), Expect = 3.5e-104
Identity = 226/339 (66.67%), Postives = 247/339 (72.86%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFP--ATTMATA-AAAAAVMKSDSGITYN 60
           MG+GAPLTGFS NAAAAETTLLPPYN +AI+SFP  A  M TA A+ AA +KSDSGITYN
Sbjct: 1   MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAAMTTATASTAAGLKSDSGITYN 60

Query: 61  LPIPRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLIS 120
           LPIPRKRARDHS++N+F    S A  +K CGC   N  FLGED S Q  QQQ DLDRLIS
Sbjct: 61  LPIPRKRARDHSTINRFASYPSPAHFQKNCGC---NHDFLGEDISNQFHQQQFDLDRLIS 120

Query: 121 LHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVE 180
            HMEKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E
Sbjct: 121 QHMEKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCME 180

Query: 181 NQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAES 240
            Q+WRDVA TNEATANALRSNLEQVLS  QVRN D   H G G            D+AES
Sbjct: 181 TQIWRDVAQTNEATANALRSNLEQVLS--QVRNND---HQGAGFEDPTTTAAVAVDDAES 240

Query: 241 CCGGNYEDLED--------------------------------RKRKEDRRCRNCWKEES 292
           CCG NY+D +D                                RK  EDR C+NCWKEES
Sbjct: 241 CCGSNYDDDDDDDDRKQANPGRWRNLNEEVEESEERNRRGRKTRKGNEDRWCKNCWKEES 300

[Close]

BLAST of Sed0002037 vs. NCBI nr
Match: XP_022970878.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita maxima])

HSP 1 Score: 389.0 bits (998), Expect = 3.5e-104
Identity = 225/337 (66.77%), Postives = 244/337 (72.40%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPI 60
           MG+GAP TGFS NAAAAETTLLPPYN +AI+SFP    A AA+ AA +KSDSGITYNLPI
Sbjct: 1   MGYGAPFTGFSANAAAAETTLLPPYNYIAIDSFP---KAAAASTAAGLKSDSGITYNLPI 60

Query: 61  PRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHM 120
           PRKRARDHS++N+FV   S A  +K CGC   N  FLGED S Q Q QQ DLDRLIS HM
Sbjct: 61  PRKRARDHSTINRFVSYPSPAHFQKNCGC---NLDFLGEDISNQFQHQQFDLDRLISQHM 120

Query: 121 EKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQL 180
           EKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E Q+
Sbjct: 121 EKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCMETQI 180

Query: 181 WRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAESCCG 240
           WRDVA TNEATANALRSNLEQVLS  QVRN D   H G G           AD+AESCCG
Sbjct: 181 WRDVAQTNEATANALRSNLEQVLS--QVRNND---HQGAGFEDPTTTAAVAADDAESCCG 240

Query: 241 GNYEDLED---------------------------------RKRKEDRRCRNCWKEESCV 292
            NY D  D                                 RK  EDR C+NCWKEESCV
Sbjct: 241 SNYNDDGDDDDDRKQANHGPWRNLNEEVEESEGRNRRGRKTRKGNEDRWCKNCWKEESCV 300

[Close]

BLAST of Sed0002037 vs. NCBI nr
Match: XP_022947721.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita moschata])

HSP 1 Score: 387.9 bits (995), Expect = 7.8e-104
Identity = 225/336 (66.96%), Postives = 247/336 (73.51%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFP--ATTMATA-AAAAAVMKSDSGITYN 60
           MG+GAPLTGFS NAAAAETTLLPPYN +AI+SFP  A  M TA A+ AA +KSDSGITYN
Sbjct: 1   MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAAMTTATASTAAGLKSDSGITYN 60

Query: 61  LPIPRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLIS 120
           L IPRKRARDHS++N+F    S A  +K CGC   N  FLGED S Q  QQQ DLDRLIS
Sbjct: 61  LRIPRKRARDHSTINRFASYPSPAHFQKNCGC---NHDFLGEDISDQFHQQQFDLDRLIS 120

Query: 121 LHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVE 180
            HMEKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E
Sbjct: 121 QHMEKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCME 180

Query: 181 NQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAES 240
            Q+WRDVA TNEATANALRSNLEQVLS  QVRN D   H G G            D+AES
Sbjct: 181 TQIWRDVAQTNEATANALRSNLEQVLS--QVRNND---HQGAGFEDPTTTAAVAVDDAES 240

Query: 241 CCGGNYEDLEDRKR-----------------------------KEDRRCRNCWKEESCVL 292
           CCG NY+D +DRK+                              EDR C+NCWKEESCVL
Sbjct: 241 CCGSNYDDDDDRKQANHGRWRNLNEEVEESEERNRRGRKTRKGNEDRWCKNCWKEESCVL 300

[Close]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot
Match: Q9LDD1 (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-52
Identity = 123/261 (47.13%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 44  AAAVMKSDSGITYNLPI-PRKRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQI 103
           ++    SD+ + +  P+  RKR+R+ S +   ++ +   +I     +   FLG+D S  +
Sbjct: 78  SSLTFNSDNNVDFLRPVSSRKRSREESVV---LNPSAYMQIQKNPTDPLMFLGQDLSSNV 137

Query: 104 QQQQLDLDRLISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNC 163
           QQ   D+DRLIS H+E++R+E+EEKR+   RRIVEA+E G+M+ LR++++EI  IGKLN 
Sbjct: 138 QQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNL 197

Query: 164 ELEERVNYLCVENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEA 223
            LEE+V  LCVENQ+WRDVA +NEAT NALRSNL+QVL+      E N   +    AD+A
Sbjct: 198 FLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAV----ERNRWEEPPTVADDA 257

Query: 224 ESCCGGNYE-DLEDRKRK-----EDRR---------CRNCWKEESCVLLLPCRHLCLCTV 283
           +SCCG N E D E+ + K     +D +         CR+C K E+ VLLLPCRH+CLC+V
Sbjct: 258 QSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSV 317

Query: 284 CGSSLQTCPICNSTNNASVRV 289
           CGSSL TCPIC S   AS+ V
Sbjct: 318 CGSSLNTCPICKSPKTASLHV 331

[Close]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot
Match: F4IDI6 (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.3e-49
Identity = 139/319 (43.57%), Postives = 181/319 (56.74%), Query Frame = 0


Query: 2   GFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPIP 61
           G+G        N  +  TT  PP   V   S    T+ T A   A   ++    +  P+P
Sbjct: 42  GYGVVSPFSVPNHTSTTTTATPPLLHVYGGS---DTIPTTAGYYADGATNLDCEF-FPLP 101

Query: 62  -RKRARDHSSMNQF--------VSSAPSRKICGCSDNNFYFLGEDFSI--QIQQQQLDLD 121
            RKR+RD S  N           SS  +      +   F FLG+D  I   + QQQ ++D
Sbjct: 102 TRKRSRDSSRSNYHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEID 161

Query: 122 RLISLH---MEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEER 181
           R +SLH   ME+V+ E+EEKR++ AR I+EAIE G+++ LR +EEE E+IGK+N  LEER
Sbjct: 162 RFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEER 221

Query: 182 VNYLCVENQLWRDVAHTNEATANALRSNLEQVLS----------VEQVRNEDNHHHD--- 241
           V  L +ENQ+WRD+A TNEATAN LR+NLE VL+          +E+  NE++       
Sbjct: 222 VKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCG 281

Query: 242 ---GGGGADEAESCCGGNYEDLEDRKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSS 291
              GGGG +      G   E  +  +R+  R CRNC +EESCVLLLPCRHLCLC VCGSS
Sbjct: 282 SSCGGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSS 341

[Close]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot
Match: Q9FHE4 (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.2e-36
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 63  KRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHMEKVRV 122
           KR RD +  +  + ++  R+    S  +   +  +   QIQQQ  ++DR ++   E +R+
Sbjct: 69  KRQRDSTFDSDALIASQKRRAIAFSPAS--LIDAELVSQIQQQNSEIDRFVAQQTETLRI 128

Query: 123 EVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQLWRDVA 182
           E+E ++R   R +  A++  +++ L++++EEI ++GKLN  L+ERV  L VENQ+WRD+A
Sbjct: 129 ELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWRDLA 188

Query: 183 HTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYEDLEDRKRKEDR 242
            TNEATAN LRSNLEQVL+  QV + D         AD+AES CG    D  D     + 
Sbjct: 189 QTNEATANNLRSNLEQVLA--QVDDLDAFRRPLVEEADDAESSCGSC--DGGDVTAVVNG 248

Query: 243 RCRNCWKEESCVLLLPCRHLCLCTVCGSS--LQTCPICNSTNNASVRVIM 291
            C+ C +  + VL+LPCRHLCLCTVCGSS  L+TCP+C+    ASV V M
Sbjct: 249 GCKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNM 292

[Close]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot
Match: O81851 (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35
Identity = 103/266 (38.72%), Postives = 150/266 (56.39%), Query Frame = 0


Query: 42  AAAAAVMKSDSGITYNLPIP---RKRARDHSSMNQFVSSAP-SRKICGCSDNNFYFLGED 101
           AA A   K++SG++YN  +P    KR RD    +   S+AP  R+      ++   +  +
Sbjct: 54  AAKANFNKAESGLSYNFTVPPLSTKRQRDFQFSD---SNAPVKRRSVAFDSSSPSLINVE 113

Query: 102 FSIQIQ-QQQLDLDRLISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEK 161
              QIQ QQQ ++DR ++   EK+R+E+E +++   R +  A++  + + L+ +++EI +
Sbjct: 114 LVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVR 173

Query: 162 IGKLNCELEERVNYLCVENQLWRDVAHTNEATANALRSNLEQVL-------SVEQVRNED 221
           I  LN  L+ERV  L VENQ+WRD+A TNEA AN LR+NL+QVL       +   V  +D
Sbjct: 174 IRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDD 233

Query: 222 NHHHDG---GGGADEAESCCGGNYEDLEDRKRKEDRRCRNCWKEESCVLLLPCRHLCLCT 281
                G   G G  EA +  GG               C+ C + E+ VL+LPCRHLCLCT
Sbjct: 234 AESSCGSCCGDGGGEAVTAVGGG--------------CKRCGEREASVLVLPCRHLCLCT 293

Query: 282 VCGSS--LQTCPICNSTNNASVRVIM 291
           VCG S  L+TCP+C+   NASV V M
Sbjct: 294 VCGGSALLRTCPVCDMVMNASVHVNM 302

[Close]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot
Match: Q8JHV9 (Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis OX=8355 GN=birc7-a PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.8e-06
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 236 RKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSLQTCPICNSTNNASVRVIM 291
           R+ KE+R C+ C  ++  +L +PC HL +CT C  +L+ CPIC +    SVR  M
Sbjct: 346 RRLKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAFM 400

[Close]

BLAST of Sed0002037 vs. ExPASy TrEMBL
Match: A0A6J1I570 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita maxima OX=3661 GN=LOC111469724 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104
Identity = 225/337 (66.77%), Postives = 244/337 (72.40%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPI 60
           MG+GAP TGFS NAAAAETTLLPPYN +AI+SFP    A AA+ AA +KSDSGITYNLPI
Sbjct: 1   MGYGAPFTGFSANAAAAETTLLPPYNYIAIDSFP---KAAAASTAAGLKSDSGITYNLPI 60

Query: 61  PRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHM 120
           PRKRARDHS++N+FV   S A  +K CGC   N  FLGED S Q Q QQ DLDRLIS HM
Sbjct: 61  PRKRARDHSTINRFVSYPSPAHFQKNCGC---NLDFLGEDISNQFQHQQFDLDRLISQHM 120

Query: 121 EKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQL 180
           EKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E Q+
Sbjct: 121 EKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCMETQI 180

Query: 181 WRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAESCCG 240
           WRDVA TNEATANALRSNLEQVLS  QVRN D   H G G           AD+AESCCG
Sbjct: 181 WRDVAQTNEATANALRSNLEQVLS--QVRNND---HQGAGFEDPTTTAAVAADDAESCCG 240

Query: 241 GNYEDLED---------------------------------RKRKEDRRCRNCWKEESCV 292
            NY D  D                                 RK  EDR C+NCWKEESCV
Sbjct: 241 SNYNDDGDDDDDRKQANHGPWRNLNEEVEESEGRNRRGRKTRKGNEDRWCKNCWKEESCV 300

[Close]

BLAST of Sed0002037 vs. ExPASy TrEMBL
Match: A0A6J1G785 (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita moschata OX=3662 GN=LOC111451502 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.8e-104
Identity = 225/336 (66.96%), Postives = 247/336 (73.51%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFP--ATTMATA-AAAAAVMKSDSGITYN 60
           MG+GAPLTGFS NAAAAETTLLPPYN +AI+SFP  A  M TA A+ AA +KSDSGITYN
Sbjct: 1   MGYGAPLTGFSANAAAAETTLLPPYNYIAIDSFPKAAAAMTTATASTAAGLKSDSGITYN 60

Query: 61  LPIPRKRARDHSSMNQFV---SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLIS 120
           L IPRKRARDHS++N+F    S A  +K CGC   N  FLGED S Q  QQQ DLDRLIS
Sbjct: 61  LRIPRKRARDHSTINRFASYPSPAHFQKNCGC---NHDFLGEDISDQFHQQQFDLDRLIS 120

Query: 121 LHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVE 180
            HMEKVR+E+EEKR++ ARRI+EAIELGMMRILRS+EEEIEKIGKLN ELEERVN LC+E
Sbjct: 121 QHMEKVRMEMEEKRKRQARRILEAIELGMMRILRSKEEEIEKIGKLNWELEERVNSLCME 180

Query: 181 NQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGG----------GADEAES 240
            Q+WRDVA TNEATANALRSNLEQVLS  QVRN D   H G G            D+AES
Sbjct: 181 TQIWRDVAQTNEATANALRSNLEQVLS--QVRNND---HQGAGFEDPTTTAAVAVDDAES 240

Query: 241 CCGGNYEDLEDRKR-----------------------------KEDRRCRNCWKEESCVL 292
           CCG NY+D +DRK+                              EDR C+NCWKEESCVL
Sbjct: 241 CCGSNYDDDDDRKQANHGRWRNLNEEVEESEERNRRGRKTRKGNEDRWCKNCWKEESCVL 300

[Close]

BLAST of Sed0002037 vs. ExPASy TrEMBL
Match: A0A6J1JCV5 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483871 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.3e-101
Identity = 213/318 (66.98%), Postives = 245/318 (77.04%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAA----VMKSDSGITY 60
           MG+GAPLTGFS N AAAETTLLPPYNSVAI+SFP    A  A+A+A    VMKSDSGI+Y
Sbjct: 1   MGYGAPLTGFSANTAAAETTLLPPYNSVAIDSFPKALGAMPASASASTGVVMKSDSGISY 60

Query: 61  NLPIPRKRARDHSSMNQFV----SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRL 120
           NLPIPRKR RDHS++N+F+    S A S+K CG    NFYFLGED SI +QQQQLDL+RL
Sbjct: 61  NLPIPRKRGRDHSTINRFLSYPSSHAHSQKNCG---RNFYFLGEDISILVQQQQLDLERL 120

Query: 121 ISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLC 180
           IS HMEKVR+E+EEKR++ ARRI+EAIE+GMM ILRS+EEEIEK+GKLN ELEERVN LC
Sbjct: 121 ISQHMEKVRMEMEEKRKREARRIMEAIEVGMMGILRSKEEEIEKMGKLNWELEERVNSLC 180

Query: 181 VENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYED 240
           +ENQ+WRDVA TNEATANALRS+LE VL    V+ E+    +     ++AESCCG N  D
Sbjct: 181 MENQIWRDVAETNEATANALRSDLELVLL--DVKKEEEVEEE-----EKAESCCGSNGGD 240

Query: 241 LED-------------------RKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSLQ 292
           +E+                    K +EDRRC+NCWKEESCVLLLPCRHLCLCTVCGSSL 
Sbjct: 241 MEEEEEEEVEEERRKGRKTRRKEKEEEDRRCKNCWKEESCVLLLPCRHLCLCTVCGSSLH 300

[Close]

BLAST of Sed0002037 vs. ExPASy TrEMBL
Match: A0A6J1FUW1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448331 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.5e-100
Identity = 211/318 (66.35%), Postives = 243/318 (76.42%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAA----VMKSDSGITY 60
           MG+GAPLTGFS N AAAETTLLPPYNSVAI+SFP    A  A+A+A    VMKSDS I+Y
Sbjct: 1   MGYGAPLTGFSANTAAAETTLLPPYNSVAIDSFPKAVGAMPASASASTGVVMKSDSAISY 60

Query: 61  NLPIPRKRARDHSSMNQFV----SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRL 120
           NLPIPRKR RDHS++N+F+    S A S+K CG    N YFLGED SI +QQQQLDL+RL
Sbjct: 61  NLPIPRKRGRDHSTINRFLSYPSSHAHSQKNCG---RNLYFLGEDISILVQQQQLDLERL 120

Query: 121 ISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLC 180
           IS HMEKVR+E+EEKR++ ARRI+EAIE+GMM ILRS+EEEIEK+GKLN ELEERVN LC
Sbjct: 121 ISQHMEKVRMEMEEKRKREARRIMEAIEVGMMGILRSKEEEIEKMGKLNWELEERVNSLC 180

Query: 181 VENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYED 240
           +ENQ+WRDVA TNEATANALRS+LE VL    V+ E+    +     ++AESCCG N  D
Sbjct: 181 MENQIWRDVAETNEATANALRSDLELVLL--DVKKEEEVEEE-----EKAESCCGSNGGD 240

Query: 241 LED-------------------RKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSLQ 292
           +E+                    K +EDRRC+NCWKEESCVLLLPCRHLCLCTVCGSSL 
Sbjct: 241 MEEEEEEEVEEERRKGRKTRRKEKEEEDRRCKNCWKEESCVLLLPCRHLCLCTVCGSSLH 300

[Close]

BLAST of Sed0002037 vs. ExPASy TrEMBL
Match: A0A6J1JF86 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483871 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.3e-100
Identity = 213/319 (66.77%), Postives = 245/319 (76.80%), Query Frame = 0


Query: 1   MGFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAA----VMKSDSGITY 60
           MG+GAPLTGFS N AAAETTLLPPYNSVAI+SFP    A  A+A+A    VMKSDSGI+Y
Sbjct: 1   MGYGAPLTGFSANTAAAETTLLPPYNSVAIDSFPKALGAMPASASASTGVVMKSDSGISY 60

Query: 61  NLPIPRKRARDHSSMNQFV----SSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRL 120
           NLPIPRKR RDHS++N+F+    S A S+K CG    NFYFLGED SI +QQQQLDL+RL
Sbjct: 61  NLPIPRKRGRDHSTINRFLSYPSSHAHSQKNCG---RNFYFLGEDISILVQQQQLDLERL 120

Query: 121 ISLH-MEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYL 180
           IS H MEKVR+E+EEKR++ ARRI+EAIE+GMM ILRS+EEEIEK+GKLN ELEERVN L
Sbjct: 121 ISQHQMEKVRMEMEEKRKREARRIMEAIEVGMMGILRSKEEEIEKMGKLNWELEERVNSL 180

Query: 181 CVENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYE 240
           C+ENQ+WRDVA TNEATANALRS+LE VL    V+ E+    +     ++AESCCG N  
Sbjct: 181 CMENQIWRDVAETNEATANALRSDLELVLL--DVKKEEEVEEE-----EKAESCCGSNGG 240

Query: 241 DLED-------------------RKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSL 292
           D+E+                    K +EDRRC+NCWKEESCVLLLPCRHLCLCTVCGSSL
Sbjct: 241 DMEEEEEEEVEEERRKGRKTRRKEKEEEDRRCKNCWKEESCVLLLPCRHLCLCTVCGSSL 300

[Close]

BLAST of Sed0002037 vs. TAIR 10
Match: AT3G12920.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 123/261 (47.13%), Postives = 170/261 (65.13%), Query Frame = 0


Query: 44  AAAVMKSDSGITYNLPI-PRKRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQI 103
           ++    SD+ + +  P+  RKR+R+ S +   ++ +   +I     +   FLG+D S  +
Sbjct: 78  SSLTFNSDNNVDFLRPVSSRKRSREESVV---LNPSAYMQIQKNPTDPLMFLGQDLSSNV 137

Query: 104 QQQQLDLDRLISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNC 163
           QQ   D+DRLIS H+E++R+E+EEKR+   RRIVEA+E G+M+ LR++++EI  IGKLN 
Sbjct: 138 QQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNL 197

Query: 164 ELEERVNYLCVENQLWRDVAHTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEA 223
            LEE+V  LCVENQ+WRDVA +NEAT NALRSNL+QVL+      E N   +    AD+A
Sbjct: 198 FLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAV----ERNRWEEPPTVADDA 257

Query: 224 ESCCGGNYE-DLEDRKRK-----EDRR---------CRNCWKEESCVLLLPCRHLCLCTV 283
           +SCCG N E D E+ + K     +D +         CR+C K E+ VLLLPCRH+CLC+V
Sbjct: 258 QSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSV 317

Query: 284 CGSSLQTCPICNSTNNASVRV 289
           CGSSL TCPIC S   AS+ V
Sbjct: 318 CGSSLNTCPICKSPKTASLHV 331

[Close]

BLAST of Sed0002037 vs. TAIR 10
Match: AT1G79110.2 (zinc ion binding )

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-52
Identity = 139/316 (43.99%), Postives = 181/316 (57.28%), Query Frame = 0


Query: 2   GFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPIP 61
           G+G        N  +  TT  PP   V   S    T+ T A   A   ++    +  P+P
Sbjct: 42  GYGVVSPFSVPNHTSTTTTATPPLLHVYGGS---DTIPTTAGYYADGATNLDCEF-FPLP 101

Query: 62  -RKRARDHSSMNQF--------VSSAPSRKICGCSDNNFYFLGEDFSI--QIQQQQLDLD 121
            RKR+RD S  N           SS  +      +   F FLG+D  I   + QQQ ++D
Sbjct: 102 TRKRSRDSSRSNYHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEID 161

Query: 122 RLISLHMEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNY 181
           R +SLHME+V+ E+EEKR++ AR I+EAIE G+++ LR +EEE E+IGK+N  LEERV  
Sbjct: 162 RFVSLHMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKS 221

Query: 182 LCVENQLWRDVAHTNEATANALRSNLEQVLS----------VEQVRNEDNHHHD------ 241
           L +ENQ+WRD+A TNEATAN LR+NLE VL+          +E+  NE++          
Sbjct: 222 LSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSC 281

Query: 242 GGGGADEAESCCGGNYEDLEDRKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSSLQT 291
           GGGG +      G   E  +  +R+  R CRNC +EESCVLLLPCRHLCLC VCGSS+ T
Sbjct: 282 GGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHT 341

[Close]

BLAST of Sed0002037 vs. TAIR 10
Match: AT1G79110.1 (zinc ion binding )

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-50
Identity = 139/319 (43.57%), Postives = 181/319 (56.74%), Query Frame = 0


Query: 2   GFGAPLTGFSDNAAAAETTLLPPYNSVAINSFPATTMATAAAAAAVMKSDSGITYNLPIP 61
           G+G        N  +  TT  PP   V   S    T+ T A   A   ++    +  P+P
Sbjct: 42  GYGVVSPFSVPNHTSTTTTATPPLLHVYGGS---DTIPTTAGYYADGATNLDCEF-FPLP 101

Query: 62  -RKRARDHSSMNQF--------VSSAPSRKICGCSDNNFYFLGEDFSI--QIQQQQLDLD 121
            RKR+RD S  N           SS  +      +   F FLG+D  I   + QQQ ++D
Sbjct: 102 TRKRSRDSSRSNYHHLLLQNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEID 161

Query: 122 RLISLH---MEKVRVEVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEER 181
           R +SLH   ME+V+ E+EEKR++ AR I+EAIE G+++ LR +EEE E+IGK+N  LEER
Sbjct: 162 RFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEER 221

Query: 182 VNYLCVENQLWRDVAHTNEATANALRSNLEQVLS----------VEQVRNEDNHHHD--- 241
           V  L +ENQ+WRD+A TNEATAN LR+NLE VL+          +E+  NE++       
Sbjct: 222 VKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCG 281

Query: 242 ---GGGGADEAESCCGGNYEDLEDRKRKEDRRCRNCWKEESCVLLLPCRHLCLCTVCGSS 291
              GGGG +      G   E  +  +R+  R CRNC +EESCVLLLPCRHLCLC VCGSS
Sbjct: 282 SSCGGGGEETVRRRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSS 341

[Close]

BLAST of Sed0002037 vs. TAIR 10
Match: AT5G45100.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-37
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 63  KRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHMEKVRV 122
           KR RD +  +  + ++  R+    S  +   +  +   QIQQQ  ++DR ++   E +R+
Sbjct: 69  KRQRDSTFDSDALIASQKRRAIAFSPAS--LIDAELVSQIQQQNSEIDRFVAQQTETLRI 128

Query: 123 EVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQLWRDVA 182
           E+E ++R   R +  A++  +++ L++++EEI ++GKLN  L+ERV  L VENQ+WRD+A
Sbjct: 129 ELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWRDLA 188

Query: 183 HTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYEDLEDRKRKEDR 242
            TNEATAN LRSNLEQVL+  QV + D         AD+AES CG    D  D     + 
Sbjct: 189 QTNEATANNLRSNLEQVLA--QVDDLDAFRRPLVEEADDAESSCGSC--DGGDVTAVVNG 248

Query: 243 RCRNCWKEESCVLLLPCRHLCLCTVCGSS--LQTCPICNSTNNASVRVIM 291
            C+ C +  + VL+LPCRHLCLCTVCGSS  L+TCP+C+    ASV V M
Sbjct: 249 GCKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNM 292

[Close]

BLAST of Sed0002037 vs. TAIR 10
Match: AT5G45100.2 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.0e-37
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 63  KRARDHSSMNQFVSSAPSRKICGCSDNNFYFLGEDFSIQIQQQQLDLDRLISLHMEKVRV 122
           KR RD +  +  + ++  R+    S  +   +  +   QIQQQ  ++DR ++   E +R+
Sbjct: 42  KRQRDSTFDSDALIASQKRRAIAFSPAS--LIDAELVSQIQQQNSEIDRFVAQQTETLRI 101

Query: 123 EVEEKRRKHARRIVEAIELGMMRILRSREEEIEKIGKLNCELEERVNYLCVENQLWRDVA 182
           E+E ++R   R +  A++  +++ L++++EEI ++GKLN  L+ERV  L VENQ+WRD+A
Sbjct: 102 ELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWRDLA 161

Query: 183 HTNEATANALRSNLEQVLSVEQVRNEDNHHHDGGGGADEAESCCGGNYEDLEDRKRKEDR 242
            TNEATAN LRSNLEQVL+  QV + D         AD+AES CG    D  D     + 
Sbjct: 162 QTNEATANNLRSNLEQVLA--QVDDLDAFRRPLVEEADDAESSCGSC--DGGDVTAVVNG 221

Query: 243 RCRNCWKEESCVLLLPCRHLCLCTVCGSS--LQTCPICNSTNNASVRVIM 291
            C+ C +  + VL+LPCRHLCLCTVCGSS  L+TCP+C+    ASV V M
Sbjct: 222 GCKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNM 265

The following BLAST results are available for this feature:

BLAST of Sed0002037 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532102.1	8.3e-106	67.66	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 [Cucurbita pepo su...	[more]
XP_023532101.1	2.0e-104	67.46	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1 [Cucurbita pepo su...	[more]
KAG6604725.1	3.5e-104	66.67	putative BOI-related E3 ubiquitin-protein ligase 3, partial [Cucurbita argyrospe...	[more]
XP_022970878.1	3.5e-104	66.77	probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita maxima]	[more]
XP_022947721.1	7.8e-104	66.96	probable BOI-related E3 ubiquitin-protein ligase 3 [Cucurbita moschata]	[more]

BLAST of Sed0002037 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDD1	3.2e-52	47.13	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
F4IDI6	3.3e-49	43.57	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9FHE4	4.2e-36	42.61	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
O81851	3.6e-35	38.72	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
Q8JHV9	7.8e-06	41.82	Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis OX=8355 GN=birc7...	[more]

BLAST of Sed0002037 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I570	1.7e-104	66.77	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1G785	3.8e-104	66.96	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JCV5	1.3e-101	66.98	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1FUW1	2.5e-100	66.35	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1JF86	3.3e-100	66.77	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucurbita maxim...	[more]

BLAST of Sed0002037 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12920.1	2.3e-53	47.13	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G79110.2	5.6e-52	43.99	zinc ion binding	[more]
AT1G79110.1	2.4e-50	43.57	zinc ion binding	[more]
AT5G45100.1	3.0e-37	42.61	SBP (S-ribonuclease binding protein) family protein	[more]
AT5G45100.2	3.0e-37	42.61	SBP (S-ribonuclease binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 240..280 e-value: 1.5E-8 score: 34.3
None	No IPR available	PANTHER	PTHR42647:SF12	BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED	coord: 20..290
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 228..291 e-value: 7.4E-13 score: 49.7
IPR017066	E3 ubiquitin-protein ligase BOI-like	PANTHER	PTHR42647	SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN	coord: 20..290
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 244..279 score: 9.125594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002037.1	Sed0002037.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043067	regulation of programmed cell death
molecular_function	GO:0004842	ubiquitin-protein transferase activity