Sed0002026 (gene) Chayote v1

Overview


Name	Sed0002026
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RmlC-like cupins superfamily protein
Location	LG07: 16380290 .. 16382350 (+)
RNA-Seq Expression	Sed0002026
Synteny	Sed0002026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTCTTCCGACTTCGAAAATGAGATGCGTCCGTCGATTACAAAACACACCACTTCATCCAGAAGAAATTCTCGCCGACCCTTGGTGAGTGGTCCTGGCTCAGAGTCGGCTGACATTCGGTCTACTCTAACACAAATTCAGTCGAAAAAACTAGAATTGGAGTATAACATCCCTTCCAATGTGGTCGTTTGTTTTCCCATCGGAGATGAATCTATTAGAACTCTTCCACCTAGGGAGATTGCTTTTAATGTTGCTATGTTCGAGAGAGGTGTCCGTCTTCCACTCATCCTACCTATTCAAGAATTTTTTTCATTGGCAAAAGTGGCCCCGAATCAACTTTCACCCAACACTTGGAACGTATTCTTCGATGTTCATAGCCTCTGGGGGTATGTCGGTTTTGAGGGGGAATTTAAAGCTAGTGATCTTCTTTCTCTGTATCGCTTTGCTCGCCACCCCGATGTCGTCGTGGGTTGTTACCTCACACCTCGCCCCAAAGTTTCTCTGCTAGTCACCTGTCCCAGCTTTTACAAGGCATGGAGAGACAAGTGGTTCTTTGTTAGCGAGAATTGGACCGTTCCATGTAGTGATTCCTCTGTCATTGTACCAACCTCGTTCGGCACCTATGGTATGTTGTCTCTCTGAAACTTTGATTATATATTTGCGACTTTTATGACAAAACCTTTTTTGTTCTCTTTTCAGTCCATCGAAATTTTGTGGTCCGCGCTCAGGTGCGCCAGTTCTATGACTTGATCATAACTTTTCCTGACACCATTCTAGATAGTGTACAATATTTACAACCGGAGTCTCTTGGCCTCTACGGTCTTCTTCCCAGAATGCCTTTGTCAGAGGATTCCGAATTCGACTCTACTGATGTGTACGAGATCGTTGGTCCAAATGGTCCGAGTAAGGGTTGTACTTTATATTTCAGAAACATACATCGCCCCCTTCTTTAATCACCAGAGTCGATCCTCACGGGTCGTCCCGCGCTAGACCAATCCACTCCAGCTTCTTTTTTTTTTACTCGTTAGTTTCTTCTATTTTTCCAGCAGTCATGGAGTATGAACCCACCTTAAGGCGGGCTTCTGACGTCGCTGCTCGCTATCCCACTAGAGGTGAGTCGTCAAAACCGCCCGTTGATGTCACCAAAGGGATACCTCTTGATGCTACCGTAGGTGAAATATGAGGCTTATATTTTCCTCCGCTCCCAACCGACATGGATATGGGAGCTGATTTAGATTATGGCGAGACGGGTACTGCCTCAGATCAAGATTCACCTTAGTCACGTGTTCGTTCCTTTGCTCAAGTTCCTGTCTTAACTCCTCCTTTGGTTTCAGTACCTTGTGATGTGAGTTCATTTGGGGACCCGATCCAAGCTTCTAGCTTATGGGCTATTGCAGGAGGTTCGCCGATGCCTTTTCCCGAGGGTGAACTAGATCATCTTCTAAAGAGTGGGACCCGTAGACTATATGAGGTAACTTCTGCAACCTTTTTTTGTACTCTTCATTGCATTTTTCCCTTACTTATTGTTTGCTCCTTCAAGGTTTTATGACTTATATGGTTGTCTGTCGGTGTCTGTTCAAGAATTCTGAGGAAACACAATCCTTTGAAGTTCTTAACTCAGAGATTACCCAACTGAAGAAGGATTTCTCTTTGTCTCGAGAGGCTCACTGCACCGCTGAAATTTCTTTGATAAAGTGTCGAATTTTCCTTGAAGAGATGAAAATTTTGTTTGCTCGAACTCATGAGGCTGATTCGGCTACCATTGTTCGACTCCAACAAAAGTTGGATGTAGCTAACGGCAAGCTGAAGAATGCAAATTATCTGGCCAACCTAGTGAGAGGCTCTCCTGCTTTTGTGGTTTTGGAGAATAACGCCTGTATTACTGCCATCAAATGGGCTTCAGACCGGATGCAGGAGGGAGTGCTTACCAAGGAGACTTTATCTCTTTTCAAGTCGTTTTGCTCTTACACTACGGAACCTGCGACTATTCCTGCTGTCTTTGTTTCTGATCCTAGGTCTTCGTATGATCCTGTGCATGCCTCATACCATGACTAG

mRNA sequence

ATGGATTCTTCTTCCGACTTCGAAAATGAGATGCGTCCGTCGATTACAAAACACACCACTTCATCCAGAAGAAATTCTCGCCGACCCTTGGTGAGTGGTCCTGGCTCAGAGTCGGCTGACATTCGGTCTACTCTAACACAAATTCAGTCGAAAAAACTAGAATTGGAGTATAACATCCCTTCCAATGTGGTCGTTTGTTTTCCCATCGGAGATGAATCTATTAGAACTCTTCCACCTAGGGAGATTGCTTTTAATGTTGCTATGTTCGAGAGAGGTGTCCGTCTTCCACTCATCCTACCTATTCAAGAATTTTTTTCATTGGCAAAAGTGGCCCCGAATCAACTTTCACCCAACACTTGGAACGTATTCTTCGATGTTCATAGCCTCTGGGGGTATGTCGGTTTTGAGGGGGAATTTAAAGCTAGTGATCTTCTTTCTCTGTATCGCTTTGCTCGCCACCCCGATGTCGTCGTGGGTTGTTACCTCACACCTCGCCCCAAAGTTTCTCTGCTAGTCACCTGTCCCAGCTTTTACAAGGCATGGAGAGACAAGTGGTTCTTTGTTAGCGAGAATTGGACCGTTCCATGTAGTGATTCCTCTGTCATTGTACCAACCTCGTTCGGCACCTATGTCCATCGAAATTTTGTGGTCCGCGCTCAGGTGCGCCAGTTCTATGACTTGATCATAACTTTTCCTGACACCATTCTAGATAGTGTACAATATTTACAACCGGAGTCTCTTGGCCTCTACGGTCTTCTTCCCAGAATGCCTTTGTCAGAGGATTCCGAATTCGACTCTACTGATGTGTACGAGATCGTTGGTCCAAATGGTCCGACAGTCATGGAGTATGAACCCACCTTAAGGCGGGCTTCTGACGTCGCTGCTCGCTATCCCACTAGAGGTGAGTCGTCAAAACCGCCCGTTGATGTCACCAAAGGGATACCTCTTGATGCTACCGTAGTACCTTGTGATGTGAGTTCATTTGGGGACCCGATCCAAGCTTCTAGCTTATGGGCTATTGCAGGAGGTTCGCCGATGCCTTTTCCCGAGGGTGAACTAGATCATCTTCTAAAGAGTGGGACCCGTAGACTATATGAGAATTCTGAGGAAACACAATCCTTTGAAGTTCTTAACTCAGAGATTACCCAACTGAAGAAGGATTTCTCTTTGTCTCGAGAGGCTCACTGCACCGCTGAAATTTCTTTGATAAAGTGTCGAATTTTCCTTGAAGAGATGAAAATTTTGTTTGCTCGAACTCATGAGGCTGATTCGGCTACCATTGTTCGACTCCAACAAAAGTTGGATGTAGCTAACGGCAAGCTGAAGAATGCAAATTATCTGGCCAACCTAGTGAGAGGCTCTCCTGCTTTTGTGGTTTTGGAGAATAACGCCTGTATTACTGCCATCAAATGGGCTTCAGACCGGATGCAGGAGGGAGTGCTTACCAAGGAGACTTTATCTCTTTTCAAGTCGTTTTGCTCTTACACTACGGAACCTGCGACTATTCCTGCTGTCTTTGTTTCTGATCCTAGGTCTTCGTATGATCCTGTGCATGCCTCATACCATGACTAG

Coding sequence (CDS)

ATGGATTCTTCTTCCGACTTCGAAAATGAGATGCGTCCGTCGATTACAAAACACACCACTTCATCCAGAAGAAATTCTCGCCGACCCTTGGTGAGTGGTCCTGGCTCAGAGTCGGCTGACATTCGGTCTACTCTAACACAAATTCAGTCGAAAAAACTAGAATTGGAGTATAACATCCCTTCCAATGTGGTCGTTTGTTTTCCCATCGGAGATGAATCTATTAGAACTCTTCCACCTAGGGAGATTGCTTTTAATGTTGCTATGTTCGAGAGAGGTGTCCGTCTTCCACTCATCCTACCTATTCAAGAATTTTTTTCATTGGCAAAAGTGGCCCCGAATCAACTTTCACCCAACACTTGGAACGTATTCTTCGATGTTCATAGCCTCTGGGGGTATGTCGGTTTTGAGGGGGAATTTAAAGCTAGTGATCTTCTTTCTCTGTATCGCTTTGCTCGCCACCCCGATGTCGTCGTGGGTTGTTACCTCACACCTCGCCCCAAAGTTTCTCTGCTAGTCACCTGTCCCAGCTTTTACAAGGCATGGAGAGACAAGTGGTTCTTTGTTAGCGAGAATTGGACCGTTCCATGTAGTGATTCCTCTGTCATTGTACCAACCTCGTTCGGCACCTATGTCCATCGAAATTTTGTGGTCCGCGCTCAGGTGCGCCAGTTCTATGACTTGATCATAACTTTTCCTGACACCATTCTAGATAGTGTACAATATTTACAACCGGAGTCTCTTGGCCTCTACGGTCTTCTTCCCAGAATGCCTTTGTCAGAGGATTCCGAATTCGACTCTACTGATGTGTACGAGATCGTTGGTCCAAATGGTCCGACAGTCATGGAGTATGAACCCACCTTAAGGCGGGCTTCTGACGTCGCTGCTCGCTATCCCACTAGAGGTGAGTCGTCAAAACCGCCCGTTGATGTCACCAAAGGGATACCTCTTGATGCTACCGTAGTACCTTGTGATGTGAGTTCATTTGGGGACCCGATCCAAGCTTCTAGCTTATGGGCTATTGCAGGAGGTTCGCCGATGCCTTTTCCCGAGGGTGAACTAGATCATCTTCTAAAGAGTGGGACCCGTAGACTATATGAGAATTCTGAGGAAACACAATCCTTTGAAGTTCTTAACTCAGAGATTACCCAACTGAAGAAGGATTTCTCTTTGTCTCGAGAGGCTCACTGCACCGCTGAAATTTCTTTGATAAAGTGTCGAATTTTCCTTGAAGAGATGAAAATTTTGTTTGCTCGAACTCATGAGGCTGATTCGGCTACCATTGTTCGACTCCAACAAAAGTTGGATGTAGCTAACGGCAAGCTGAAGAATGCAAATTATCTGGCCAACCTAGTGAGAGGCTCTCCTGCTTTTGTGGTTTTGGAGAATAACGCCTGTATTACTGCCATCAAATGGGCTTCAGACCGGATGCAGGAGGGAGTGCTTACCAAGGAGACTTTATCTCTTTTCAAGTCGTTTTGCTCTTACACTACGGAACCTGCGACTATTCCTGCTGTCTTTGTTTCTGATCCTAGGTCTTCGTATGATCCTGTGCATGCCTCATACCATGACTAG

Protein sequence

MDSSSDFENEMRPSITKHTTSSRRNSRRPLVSGPGSESADIRSTLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPPREIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEFKASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVSENWTVPCSDSSVIVPTSFGTYVHRNFVVRAQVRQFYDLIITFPDTILDSVQYLQPESLGLYGLLPRMPLSEDSEFDSTDVYEIVGPNGPTVMEYEPTLRRASDVAARYPTRGESSKPPVDVTKGIPLDATVVPCDVSSFGDPIQASSLWAIAGGSPMPFPEGELDHLLKSGTRRLYENSEETQSFEVLNSEITQLKKDFSLSREAHCTAEISLIKCRIFLEEMKILFARTHEADSATIVRLQQKLDVANGKLKNANYLANLVRGSPAFVVLENNACITAIKWASDRMQEGVLTKETLSLFKSFCSYTTEPATIPAVFVSDPRSSYDPVHASYHD

Homology

[Close]

BLAST of Sed0002026 vs. NCBI nr
Match: GFZ16852.1 (hypothetical protein Acr_26g0001220 [Actinidia rufa])

HSP 1 Score: 90.5 bits (223), Expect = 4.6e-14
Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 26  SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
           S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P+  E+I +   
Sbjct: 34  SQSPSSPPPNSPKMDTSSLTKEGNVMTQAELDKLGSTYSFPSGIRLRIPVDGETILSARQ 93

Query: 86  REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
            E+AF  A F+ G+RLPL   I+E     K+ P QLSPN W        +W +  F+   
Sbjct: 94  GEVAFYEAAFQAGLRLPLHPTIREILIHYKICPAQLSPNAWRSVICSLVIWRH--FKRHM 153

Query: 146 KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
              +   LY  +  PD     Y   RP  +LL   PS  K W+ ++FF S + W  P   
Sbjct: 154 SCDEFRCLYSLSPLPD-SGWYYFKARPDKNLLRGSPSNVKGWKTRFFFASGDEWEFPSGT 213

Query: 206 CSDSSVIVPTSFGT 210
            + +++ VP S+GT
Sbjct: 214 AASNTLRVPRSWGT 224

[Close]

BLAST of Sed0002026 vs. NCBI nr
Match: GFS40352.1 (hypothetical protein Acr_00g0068040 [Actinidia rufa])

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-13
Identity = 60/194 (30.93%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 26  SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
           S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P   E+I +   
Sbjct: 34  SQSPSSPPPNSPKMDTSSLTKEGNVMTQAELDKLGSTYSFPSGIRLRIPGDGETILSARQ 93

Query: 86  REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
            E+AF  A F+ G+RLP+   I+E     K+ P QLSPN W        +W +  F+   
Sbjct: 94  GEVAFYEAAFQAGLRLPIHPTIREILVHYKICPAQLSPNAWRSVICSLVIWRH--FKRHM 153

Query: 146 KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
              +   LY  +  PD     Y   RP  +LL+  PS  K W+ ++FF S + W  P   
Sbjct: 154 SCDEFRCLYSLSPLPD-SGWFYFKARPDKNLLLGSPSNVKGWKTRFFFASGDEWEFPSGT 213

Query: 206 CSDSSVIVPTSFGT 210
            + +++ VP S+GT
Sbjct: 214 AASNTLRVPRSWGT 224

[Close]

BLAST of Sed0002026 vs. NCBI nr
Match: GFZ13232.1 (hypothetical protein Acr_23g0016170 [Actinidia rufa])

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-13
Identity = 57/172 (33.14%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 43  STLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPPREIAFNVAMFERGVRLPLILPIQ 102
           + ++Q +  KL   Y+ PS + +  P   E+I +    E+AF  A F  G+RLPL   I+
Sbjct: 387 NVMSQAELDKLGSTYSFPSGIRLRIPRDGETILSTRQGEVAFYEAAFLAGLRLPLHPTIR 446

Query: 103 EFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEFKASDLLSLYRFARHPDVVVGCYL 162
           E     K+ P QLSPN W     ++SL  +  F+      +   LY  +  PD     Y 
Sbjct: 447 EILIHYKICPAQLSPNAWRSV--IYSLVVWRHFKRHMSCDEFRCLYSLSPLPD-SGWYYF 506

Query: 163 TPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP----CSDSSVIVPTSFGT 210
             RP+ +L    PS  K W+ ++FFVS + W  P     SD +  VP S+GT
Sbjct: 507 KARPEKNLFQRSPSNVKGWKTRFFFVSGDEWEFPSGVATSDITARVPRSWGT 555

[Close]

BLAST of Sed0002026 vs. NCBI nr
Match: GFZ20489.1 (RmlC-like cupins superfamily protein [Actinidia rufa])

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-13
Identity = 62/194 (31.96%), Postives = 91/194 (46.91%), Query Frame = 0


Query: 26   SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
            S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P   E I +   
Sbjct: 894  SQSPSSPPPNSPKMDTSSLAKEGNVMTQAELDKLGSTYSFPSGIRLRIPGDGEIILSARQ 953

Query: 86   REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
             E+AF  A F+ G+RLP+ L I+E     K+ P QLSPN W   F + SL  +  F+   
Sbjct: 954  GEVAFYEAAFQAGLRLPIHLTIREILVHYKICPAQLSPNAWR--FVICSLVIWRHFKRHM 1013

Query: 146  KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
               +   LY  +  PD     Y   +P  +LL   PS  K W+ ++FF S + W  P   
Sbjct: 1014 SCDEFRCLYSLSPLPD-SGWFYFKAKPDKNLLRGSPSNVKGWKTRFFFASGDEWEFPSGT 1073

Query: 206  CSDSSVIVPTSFGT 210
             + +++ VP S+GT
Sbjct: 1074 AASNTLRVPRSWGT 1084

[Close]

BLAST of Sed0002026 vs. NCBI nr
Match: GFY95425.1 (hypothetical protein Acr_10g0008100 [Actinidia rufa])

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-13
Identity = 54/171 (31.58%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 43  STLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPPREIAFNVAMFERGVRLPLILPIQ 102
           + +TQ +  KL   Y+ PS + +  P   E+I +    E+AF  A F+ G+RLP+   I+
Sbjct: 11  NVMTQAELDKLGSTYSFPSGIRLRIPGDGETILSARQGEVAFYEAAFQAGLRLPIHPTIR 70

Query: 103 EFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEFKASDLLSLYRFARHPDVVVGCYL 162
           E     K+ P QLSPN W        +W +  F+      +   LY  +  PD     Y 
Sbjct: 71  EILVHYKICPAQLSPNAWRSVICSLVIWRH--FKRHMSCDEFRCLYSLSPLPD-SGWFYF 130

Query: 163 TPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP---CSDSSVIVPTSFGT 210
             RP  +LL   PS  K W+ ++FF S + W +P    + +++ VP S+GT
Sbjct: 131 KARPDKNLLRGSPSNVKGWKTRFFFASGDEWELPSGTAASNTLRVPRSWGT 178

[Close]

BLAST of Sed0002026 vs. ExPASy TrEMBL
Match: A0A7J0H1C8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0001220 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-14
Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 26  SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
           S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P+  E+I +   
Sbjct: 34  SQSPSSPPPNSPKMDTSSLTKEGNVMTQAELDKLGSTYSFPSGIRLRIPVDGETILSARQ 93

Query: 86  REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
            E+AF  A F+ G+RLPL   I+E     K+ P QLSPN W        +W +  F+   
Sbjct: 94  GEVAFYEAAFQAGLRLPLHPTIREILIHYKICPAQLSPNAWRSVICSLVIWRH--FKRHM 153

Query: 146 KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
              +   LY  +  PD     Y   RP  +LL   PS  K W+ ++FF S + W  P   
Sbjct: 154 SCDEFRCLYSLSPLPD-SGWYYFKARPDKNLLRGSPSNVKGWKTRFFFASGDEWEFPSGT 213

Query: 206 CSDSSVIVPTSFGT 210
            + +++ VP S+GT
Sbjct: 214 AASNTLRVPRSWGT 224

[Close]

BLAST of Sed0002026 vs. ExPASy TrEMBL
Match: A0A7J0DQJ7 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0068040 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.5e-14
Identity = 60/194 (30.93%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 26  SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
           S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P   E+I +   
Sbjct: 34  SQSPSSPPPNSPKMDTSSLTKEGNVMTQAELDKLGSTYSFPSGIRLRIPGDGETILSARQ 93

Query: 86  REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
            E+AF  A F+ G+RLP+   I+E     K+ P QLSPN W        +W +  F+   
Sbjct: 94  GEVAFYEAAFQAGLRLPIHPTIREILVHYKICPAQLSPNAWRSVICSLVIWRH--FKRHM 153

Query: 146 KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
              +   LY  +  PD     Y   RP  +LL+  PS  K W+ ++FF S + W  P   
Sbjct: 154 SCDEFRCLYSLSPLPD-SGWFYFKARPDKNLLLGSPSNVKGWKTRFFFASGDEWEFPSGT 213

Query: 206 CSDSSVIVPTSFGT 210
            + +++ VP S+GT
Sbjct: 214 AASNTLRVPRSWGT 224

[Close]

BLAST of Sed0002026 vs. ExPASy TrEMBL
Match: A0A7J0HBR7 (RmlC-like cupins superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_28g0011940 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-13
Identity = 62/194 (31.96%), Postives = 91/194 (46.91%), Query Frame = 0


Query: 26   SRRPLVSGPGSESADIRS------TLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPP 85
            S+ P    P S   D  S       +TQ +  KL   Y+ PS + +  P   E I +   
Sbjct: 894  SQSPSSPPPNSPKMDTSSLAKEGNVMTQAELDKLGSTYSFPSGIRLRIPGDGEIILSARQ 953

Query: 86   REIAFNVAMFERGVRLPLILPIQEFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEF 145
             E+AF  A F+ G+RLP+ L I+E     K+ P QLSPN W   F + SL  +  F+   
Sbjct: 954  GEVAFYEAAFQAGLRLPIHLTIREILVHYKICPAQLSPNAWR--FVICSLVIWRHFKRHM 1013

Query: 146  KASDLLSLYRFARHPDVVVGCYLTPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP--- 205
               +   LY  +  PD     Y   +P  +LL   PS  K W+ ++FF S + W  P   
Sbjct: 1014 SCDEFRCLYSLSPLPD-SGWFYFKAKPDKNLLRGSPSNVKGWKTRFFFASGDEWEFPSGT 1073

Query: 206  CSDSSVIVPTSFGT 210
             + +++ VP S+GT
Sbjct: 1074 AASNTLRVPRSWGT 1084

[Close]

BLAST of Sed0002026 vs. ExPASy TrEMBL
Match: A0A7J0GR05 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_23g0016170 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-13
Identity = 57/172 (33.14%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 43  STLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPPREIAFNVAMFERGVRLPLILPIQ 102
           + ++Q +  KL   Y+ PS + +  P   E+I +    E+AF  A F  G+RLPL   I+
Sbjct: 387 NVMSQAELDKLGSTYSFPSGIRLRIPRDGETILSTRQGEVAFYEAAFLAGLRLPLHPTIR 446

Query: 103 EFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEFKASDLLSLYRFARHPDVVVGCYL 162
           E     K+ P QLSPN W     ++SL  +  F+      +   LY  +  PD     Y 
Sbjct: 447 EILIHYKICPAQLSPNAWRSV--IYSLVVWRHFKRHMSCDEFRCLYSLSPLPD-SGWYYF 506

Query: 163 TPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP----CSDSSVIVPTSFGT 210
             RP+ +L    PS  K W+ ++FFVS + W  P     SD +  VP S+GT
Sbjct: 507 KARPEKNLFQRSPSNVKGWKTRFFFVSGDEWEFPSGVATSDITARVPRSWGT 555

[Close]

BLAST of Sed0002026 vs. ExPASy TrEMBL
Match: A0A7J0F9S8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0008100 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13
Identity = 54/171 (31.58%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 43  STLTQIQSKKLELEYNIPSNVVVCFPIGDESIRTLPPREIAFNVAMFERGVRLPLILPIQ 102
           + +TQ +  KL   Y+ PS + +  P   E+I +    E+AF  A F+ G+RLP+   I+
Sbjct: 11  NVMTQAELDKLGSTYSFPSGIRLRIPGDGETILSARQGEVAFYEAAFQAGLRLPIHPTIR 70

Query: 103 EFFSLAKVAPNQLSPNTWNVFFDVHSLWGYVGFEGEFKASDLLSLYRFARHPDVVVGCYL 162
           E     K+ P QLSPN W        +W +  F+      +   LY  +  PD     Y 
Sbjct: 71  EILVHYKICPAQLSPNAWRSVICSLVIWRH--FKRHMSCDEFRCLYSLSPLPD-SGWFYF 130

Query: 163 TPRPKVSLLVTCPSFYKAWRDKWFFVS-ENWTVP---CSDSSVIVPTSFGT 210
             RP  +LL   PS  K W+ ++FF S + W +P    + +++ VP S+GT
Sbjct: 131 KARPDKNLLRGSPSNVKGWKTRFFFASGDEWELPSGTAASNTLRVPRSWGT 178

The following BLAST results are available for this feature:

BLAST of Sed0002026 vs. NCBI nr


Match Name	E-value	Identity	Description
GFZ16852.1	4.6e-14	31.44	hypothetical protein Acr_26g0001220 [Actinidia rufa]	[more]
GFS40352.1	1.8e-13	30.93	hypothetical protein Acr_00g0068040 [Actinidia rufa]	[more]
GFZ13232.1	2.3e-13	33.14	hypothetical protein Acr_23g0016170 [Actinidia rufa]	[more]
GFZ20489.1	2.3e-13	31.96	RmlC-like cupins superfamily protein [Actinidia rufa]	[more]
GFY95425.1	3.0e-13	31.58	hypothetical protein Acr_10g0008100 [Actinidia rufa]	[more]

BLAST of Sed0002026 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J0H1C8	2.2e-14	31.44	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0001220 PE=4 SV=1	[more]
A0A7J0DQJ7	8.5e-14	30.93	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0068040 PE=4 SV=1	[more]
A0A7J0HBR7	1.1e-13	31.96	RmlC-like cupins superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_28g00119...	[more]
A0A7J0GR05	1.1e-13	33.14	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_23g0016170 PE=4 SV=1	[more]
A0A7J0F9S8	1.4e-13	31.58	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_10g0008100 PE=4 SV=1	[more]

BLAST of Sed0002026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002026.1	Sed0002026.1	mRNA