Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCACAGTTGGCCATTCTTCACTCCAAGTTGGCGTCTCAAGTTCAGCTTCCATGTTTGTCTTCAAACAGGATTAGAATTTCAGCCATGGCGGTACCTCAACCATCATCATTATCATTATCATCATCATCATCGTCATCAGGCCGGAGATTATGGAACTTCCCCACAACAACTACTAGACTATCAAATATGGCTGTTAAAACTCATCTCCCTCTTGTTTCTCCCCACGATCATTTGGCCAACTTCGCCGTCTTATTCTTCGCCGGAGCCCTCGGTATCTGGTGTGTGTTGTTCTATTTCTTGAATGCTTCTTCTCTATATCATTAACAATGAGTTATGATTTGTTTCAATTCAGAATAACTTATGTTTTGTTCCATCTATGTGTCCTCAAACCCTATAAATGTACAAGGTTTTGAAGTATCCAATTATTATAATTTTTTTTTTTTTTGGTATTCGTGATTATCCAAGCCAGTTGCGAGCACTTCAACTAATGTCATGCACATACATGGTTGGTGACCATGTAAGGGTCCCCAAGTTATGTCAATATTCTAGAAAGGGTAAATTGAGTAATTCCTTAATAGGGTATCTTGGGGAAGGGGGAAAAAGGAAGAGGGAAGAGGGAGACTCTTGTAGGGTATAAATAGTGGAATGAAAGGAGAGTGGGGGGTCTTATTTTGTGTGGAGGCTAGGTCATAGGATTTGGAGGAGAGGTTCCGGTGGCTCTCAAACATCACCATTCAGCTTATCGTTTTCTTTATTATCTTTTCATGTTGTTATTTCTATCTATTTGATTGTTGGTATTGTTCTGTGGATTTCTGGGAACTTGTTAGGTATCTGATACCTATCAGACCACCCTGGATTGAACCATCACTTTAAGCAGTATTTGACGACTAATTCATTCTATTATGGTTCCAATTTTAGATTACTCTAGGATTTAGTCTTGATTCTCAACAATTTCTACCATTTATGCTTTTAGTTTTTATTGAGGTTAAATGTAAAAATGGGTCTTTTTCAAAAACTTACTACTTAAATGGGTTTTATTTCAAACATATTGTCAAAATGGGTCTAATTTTTTGTCTTCATGTAGTGATGACTATTGTAAAGTCACCACCACGTTGAATTTTTCAAAATTGGATTTATCTTGGATGGAAAAGTGGATGGAAAGTTATTCTTTTTTTTAATTATTATTCTTTTTTTTAATGTGTTACCTTATCATATTTTTTAAAATTTTCTAATTGATTTAACTAAACAAATATTTTTTTTATCCTAAGTTTATTTATTTTTTATCCTAAATTAAAATGATATTAATTATTTATATATATTTTTAACCTAAATCATTTATACAATGAAACGAAACTTGAATCAAAATAGGAAATATTTTATTTATAGTGGAAATGGAAAAATATTTGAATAGGGCAACATGAAAATTTGTAGCTGAGGTATAATATTTGTTATAAAATTGTGTTCATATTTATATCCTTGTATGTTTATCATTGTCATAATATTAGGTAGTATATATTTTTAGTTGTATTATACTTTCACTAGTAATATGATTTTTATTAAAATAAGAGCTAGTTGCTTTCTTTTAATTGCAGGTCCGAAGAAACGAAGATCGGCCGTGCACTAAGTGGTGCCCTGGTGGCCACATTGCTAGGACTTGCTGCCAATAATCTAGGGATCGTTGCGTCTAATGCTTCATCTTTTCCAATTGTTATGGACTTTTTGCTCCCATCAGCAGTTCATTTGCTTTTATTTAGAGCAGATTTGAATCATGTATTAAATCCAACTGAGGCACTTTTCCCGGCCCTTTTCTTAGGTTCAGGTAATGGATCTTCTTATGTCACAGTATTATCCTAGTTTATGTTATTAATCTTCGTTAGCATTAATTTATGCTTTTCTTAATGCAAACTCTATTGTGCTTCGTTTAGATTGTAGTTTACTATGTATTGTCCTTAAGTTTGTGCGCCACAATATTCTTCCCCCACACCTGTCTTCAAGGGGTGGTGCACTGGTTGAAGACTTGGACTTTGAAGGTATGTTCCCTTTGAGACTCACTTATAACATTACTCTTTCAATGTCTGCGGTGCCTAGCCTAGGGACGTGCGTAGTTACCCTCATTTAAAAAAAAAATTCTTCCCCCACACCTATCTTCTCTATGATCTCTTCAAAGGATAGAATATCCTCTTTTTTTCGGAGGTTGGTGGTTCAACTTTCCAACCCCACTTATGGTTGAACTCAAAACAATAATTTCTTTTTATCCCCAAGGGGTGGCACAAGAAGACATAGGCTTTGAAGGTATGCTCCTCTCAAGGTCTTGGTTCGAGACTCATCTGTGACATTACTCCTTCGGTGTCTCCGGTGCCTGGCCTAGGGACGGGGTCAACATTTCTCACACCACATAGGGCCATCTTGACGAGCTTTTTTGTTCTCTTTCTTTGGATAGTTGGAACGATAATGGGAACTGTAGCGGCTCATTTAGTTGTATCAATGAGATCAATTGCTCGAGACATATAGAAAGTTAAAGCCAATAGAAAAAGGAGCTATTTCCCAACGCAGGGAGTGTATTTGGGTAGTAATGGTTTGGGTAGAGGTAATGTTCTTTTTTTTTTTCTCAATGGAAAGTGACACATTCATTCATTGAAATATTATTTTTTAGTTCACTATCTTATAGATGTTTTTTTTTACAGATCCAAGGATCAAGTATCTTGATATGTCTAATATTTATTACGAATCTACGGAGACATTTGCTTTGGGATTTGGTGCACAAAATATAATTCGTGCAGTTTATTTTGCAATGTTGTGCGCATTAGCGTCTAGAATACCTCCTGAAACTAAATGTTAAAAGTTCATATTCTATCAATTAGAGTTTTTTTTAAACATGTTTAATTCATCGACCAAACCTAAAAGTTTAGGCTCGGTTTGATAACCATTTAGTTTTTTGTTTTTGGTTTATGAAATTTAAGCTTATTTCTATCCGAATTTCCTACCATGTGTTCCATCTTTCCTACAATGTATCCATATTTTCTTAAGAAAGTAGGAGAATACTAACCAAATTTCAAAAACAAAAATAAGTTTTTGGAAGCTACTTTTTTTTTTGTTTCCAAATTTTTATTTTGTTTATTAAAATATAGGTAAGAGGTAGATATTCAAATAAGGAAAAATGTATAGTAAACTGAAATTTGTTGTTGTAATTGTTGTAGGCTTAAATTTCATAAACAAAAAATGAAAAGCAAAATGGTTATCAAACGGGATCTTACGGTATATCAATCAAAGTACTCCTCACTTGTGAGCTTGAAAATTTTGAGAATGTCCATCCAATGGAAATCAATATTAATTAAGGATGAAACGACCTGGTATGAATTTGAACCTAGGGACATCTTTTGGTTAAGTTGATGGTTTGGAGTAAATTAAATTATATCAACTAACAATTTTCATAACTATGTTACCAAGTTTTGCAAAATTAGGCTTCTCATGAAAGTTTTGTGTAGGGATGGATGAAAAGATTGAGTACAACAACAACAAGAAGCTTTCTCCGTTACAGTTTGCAAAATCTCATGCAGTTTCATTTTCCATTTGTAAAGTTGGTTTCTACCTGAGCAAATGTTTAAGGATTCAAGGTAGTAGCTTGCCGGTCATTACAGTGGTCACCGTCGTCTTAGTAACCATTTTTCCCGAGCCGTTTGCTTGGCTTGCTCCTTCGGGTGAAGCTATGGCTATGATTCTAATGCAGGTAACGTTTATACACTTGTCCCGAGTTCACTAATGCTCGTTTGTAAGAACCCTAAAGGAATTTGGAGCTTTGCTCCTCTAAACCCGGGCACTACTGGCTCGTCCCGGCTAATGGTTATGTTATGTTAGATTTGGAAAAAATGCATGATTTTGAAACTCATCAACCCACTAGAAACTAAGGTCAATTTTGAAATTCACAATGATTTAGTTTTGAGACAAAACCTCAATTTTACATCTCTACTGTATTTGAACTGATTTTTTTTTAAGTTCCATTAATTTTGGATTATTACTTTTTTGTATTTGTCTTTTTAATTGTATCTTTTTCTTTCTTTTCATTGAGATATGAAAAGTTTGTCTTCATCCTTCTTTACTTTTCACACTTTTAAGTTCTTGACGAAGTTTTATTTTGTTTCCATTCATAGAATATTCACGAGACACACAGTCTGACCCTAAGATGTACTTTAAATTCTATTCATACTATTTAAAATTCTAATGATCTGTCCTCAAAAGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCAGTCTTCCCTATCACATTACTCCTTCGATGTCTCCGGTGCCTGGCCTAGGGACGGGCATGGTTACCTTAATTCAAAAAAAAAATTCCTAATGATTTGTACGCCTCATTGTCTTGAGACACGTTTTTTTTTTGCATTTATGGGAGCGAGAAAATATAGGGAGTGCCCTTAAAACTACACCATATATCTTAATGTATTCTCTTGTCGAGCTTTCTGTCCATCTTGTCATAACCATTGGTCTTGGGAAGCTGCTTCGCTTCGACTTGAAGTCTCTGCTGATAGCATCCAATGCCATCATTGGTGACCCCACGACAGCCTGCGTGATTGCTACGACAAAGAGTTGGAGTTCAATGCTAATTCCTCGAGTTTTTACTGGAATTTTTGGAGTTCCTATTGGAATGTTCTTAACTACTTGGTTAGGTATGCTATACGTAGCATACAGGTAA
mRNA sequence
ATGGCTTCACAGTTGGCCATTCTTCACTCCAAGTTGGCGTCTCAAGTTCAGCTTCCATGTTTGTCTTCAAACAGGATTAGAATTTCAGCCATGGCGGTACCTCAACCATCATCATTATCATTATCATCATCATCATCGTCATCAGGCCGGAGATTATGGAACTTCCCCACAACAACTACTAGACTATCAAATATGGCTGTTAAAACTCATCTCCCTCTTGTTTCTCCCCACGATCATTTGGCCAACTTCGCCGTCTTATTCTTCGCCGGAGCCCTCGGTATCTGGTCCGAAGAAACGAAGATCGGCCGTGCACTAAGTGGTGCCCTGGTGGCCACATTGCTAGGACTTGCTGCCAATAATCTAGGGATCGTTGCGTCTAATGCTTCATCTTTTCCAATTGTTATGGACTTTTTGCTCCCATCAGCAGTTCATTTGCTTTTATTTAGAGCAGATTTGAATCATGTATTAAATCCAACTGAGGCACTTTTCCCGGCCCTTTTCTTAGGTTCAGTTGGAACGATAATGGGAACTGTAGCGGCTCATTTAGTTGTATCAATGAGATCAATTTATCTTGATATGTCTAATATTTATTACGAATCTACGGAGACATTTGCTTTGGGATTTGGTGCACAAAATATAATTCGTGCAGTTTATTTTGCAATGTTGTGCGCATTAGCGTCTAGAATACCTCCTGAAACTAAATGGATGGATGAAAAGATTGAGTACAACAACAACAAGAAGCTTTCTCCGTTACAGTTTGCAAAATCTCATGCAGTTTCATTTTCCATTTGTAAAGTTGGTTTCTACCTGAGCAAATGTTTAAGGATTCAAGGTAGTAGCTTGCCGGTCATTACAGTGGTCACCGTCGTCTTAGTAACCATTTTTCCCGAGCCGTTTGCTTGGCTTGCTCCTTCGGGTGAAGCTATGGCTATGATTCTAATGCAGGTAACACACGTTTTTTTTTTGCATTTATGGGAGCGAGAAAATATAGGGAGTGCCCTTAAAACTACACCATATATCTTAATGTATTCTCTTGTCGAGCTTTCTGTCCATCTTGTCATAACCATTGGTCTTGGGAAGCTGCTTCGCTTCGACTTGAAGTCTCTGCTGATAGCATCCAATGCCATCATTGGTGACCCCACGACAGCCTGCGTGATTGCTACGACAAAGAGTTGGAGTTCAATGCTAATTCCTCGAGTTTTTACTGGAATTTTTGGAGTTCCTATTGGAATGTTCTTAACTACTTGGTTAGGTATGCTATACGTAGCATACAGGTAA
Coding sequence (CDS)
ATGGCTTCACAGTTGGCCATTCTTCACTCCAAGTTGGCGTCTCAAGTTCAGCTTCCATGTTTGTCTTCAAACAGGATTAGAATTTCAGCCATGGCGGTACCTCAACCATCATCATTATCATTATCATCATCATCATCGTCATCAGGCCGGAGATTATGGAACTTCCCCACAACAACTACTAGACTATCAAATATGGCTGTTAAAACTCATCTCCCTCTTGTTTCTCCCCACGATCATTTGGCCAACTTCGCCGTCTTATTCTTCGCCGGAGCCCTCGGTATCTGGTCCGAAGAAACGAAGATCGGCCGTGCACTAAGTGGTGCCCTGGTGGCCACATTGCTAGGACTTGCTGCCAATAATCTAGGGATCGTTGCGTCTAATGCTTCATCTTTTCCAATTGTTATGGACTTTTTGCTCCCATCAGCAGTTCATTTGCTTTTATTTAGAGCAGATTTGAATCATGTATTAAATCCAACTGAGGCACTTTTCCCGGCCCTTTTCTTAGGTTCAGTTGGAACGATAATGGGAACTGTAGCGGCTCATTTAGTTGTATCAATGAGATCAATTTATCTTGATATGTCTAATATTTATTACGAATCTACGGAGACATTTGCTTTGGGATTTGGTGCACAAAATATAATTCGTGCAGTTTATTTTGCAATGTTGTGCGCATTAGCGTCTAGAATACCTCCTGAAACTAAATGGATGGATGAAAAGATTGAGTACAACAACAACAAGAAGCTTTCTCCGTTACAGTTTGCAAAATCTCATGCAGTTTCATTTTCCATTTGTAAAGTTGGTTTCTACCTGAGCAAATGTTTAAGGATTCAAGGTAGTAGCTTGCCGGTCATTACAGTGGTCACCGTCGTCTTAGTAACCATTTTTCCCGAGCCGTTTGCTTGGCTTGCTCCTTCGGGTGAAGCTATGGCTATGATTCTAATGCAGGTAACACACGTTTTTTTTTTGCATTTATGGGAGCGAGAAAATATAGGGAGTGCCCTTAAAACTACACCATATATCTTAATGTATTCTCTTGTCGAGCTTTCTGTCCATCTTGTCATAACCATTGGTCTTGGGAAGCTGCTTCGCTTCGACTTGAAGTCTCTGCTGATAGCATCCAATGCCATCATTGGTGACCCCACGACAGCCTGCGTGATTGCTACGACAAAGAGTTGGAGTTCAATGCTAATTCCTCGAGTTTTTACTGGAATTTTTGGAGTTCCTATTGGAATGTTCTTAACTACTTGGTTAGGTATGCTATACGTAGCATACAGGTAA
Protein sequence
MASQLAILHSKLASQVQLPCLSSNRIRISAMAVPQPSSLSLSSSSSSSGRRLWNFPTTTTRLSNMAVKTHLPLVSPHDHLANFAVLFFAGALGIWSEETKIGRALSGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPALFLGSVGTIMGTVAAHLVVSMRSIYLDMSNIYYESTETFALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKIEYNNNKKLSPLQFAKSHAVSFSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVFFLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDPTTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAYR
Homology
BLAST of Sed0002008 vs. NCBI nr
Match:
XP_022140905.1 (uncharacterized protein LOC111011457 isoform X3 [Momordica charantia])
HSP 1 Score: 381.7 bits (979), Expect = 8.2e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 335 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 394
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 395 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 454
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 455 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 514
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 515 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 574
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 575 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 634
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 635 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 694
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 695 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 754
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 755 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 794
BLAST of Sed0002008 vs. NCBI nr
Match:
XP_022140902.1 (uncharacterized protein LOC111011457 isoform X1 [Momordica charantia])
HSP 1 Score: 381.7 bits (979), Expect = 8.2e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 534 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 593
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 594 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 653
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 654 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 713
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 714 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 773
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 774 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 833
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 834 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 893
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 894 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 953
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 954 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 993
BLAST of Sed0002008 vs. NCBI nr
Match:
XP_022140906.1 (uncharacterized protein LOC111011457 isoform X4 [Momordica charantia])
HSP 1 Score: 381.7 bits (979), Expect = 8.2e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 296 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 355
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 356 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 415
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 416 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 475
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 476 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 535
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 536 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 595
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 596 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 655
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 656 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 715
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 716 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 755
BLAST of Sed0002008 vs. NCBI nr
Match:
XP_038877446.1 (uncharacterized membrane protein YjcL-like [Benincasa hispida])
HSP 1 Score: 379.0 bits (972), Expect = 5.3e-101
Identity = 238/463 (51.40%), Postives = 295/463 (63.71%), Query Frame = 0
Query: 3 SQLAILHSKLASQVQLPCLS--------SNRIRISAMAVPQPSSLSLSSSSSSSGRRLWN 62
SQLA LHSK + Q PCLS S RI ++ + QPS S S + GRR WN
Sbjct: 5 SQLANLHSK-SPGAQPPCLSSCKFSVGFSRRIAMAPQPLLQPSLSSSSLDAEIRGRRFWN 64
Query: 63 FPTTTT----RLSNMAVKTHL----PLVSPHDHLANFAVLFFAGALGIWSEETKIGRALS 122
F ++T ++AVK+HL PL+SPHD N+ VLF GA GIWSE+TKIG ALS
Sbjct: 65 FRKSSTGNVQLRRDVAVKSHLKLNVPLISPHDQWGNWTVLFSIGAFGIWSEKTKIGSALS 124
Query: 123 GALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPAL 182
GALV+TL+GLAA+N GI+AS+A +FPIV++FLLP AV LLLFRADL V+ T L A
Sbjct: 125 GALVSTLVGLAASNFGIIASDAPAFPIVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAF 184
Query: 183 FLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETFA 242
LGSVGT +GTV A+ +V MRS+ Y+ +S+ S A
Sbjct: 185 LLGSVGTTIGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSPSVLA 244
Query: 243 LGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVSF 302
G A N+I AVYFA L ALAS++PPET +D + E + KL LQ A + AVSF
Sbjct: 245 AGLAADNVICAVYFATLFALASKVPPETTILDNDVGKGAEVEPSNKLPVLQSATAIAVSF 304
Query: 303 SICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVFF 362
+ICKVG YL+K IQG S+P IT V VVL TIFP+ FA+LAPSGEAMA+ILMQ VFF
Sbjct: 305 AICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQ---VFF 364
Query: 363 LHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDPT 422
+ NI S + T P I ++S V+++VHL I +GLGKLLRFDLK LLIASNA +G PT
Sbjct: 365 AVVGASGNIWSVINTAPSIFIFSFVQIAVHLAIILGLGKLLRFDLKLLLIASNANVGGPT 424
Query: 423 TACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TAC +AT K WSSM+IP + GIFG+ I FL GM+ + Y
Sbjct: 425 TACGMATAKGWSSMIIPGILAGIFGIAIATFLGIGFGMVVLKY 463
BLAST of Sed0002008 vs. NCBI nr
Match:
XP_022140903.1 (uncharacterized protein LOC111011457 isoform X2 [Momordica charantia])
HSP 1 Score: 370.5 bits (950), Expect = 1.9e-98
Identity = 233/453 (51.43%), Postives = 289/453 (63.80%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL +KL ++Q PC SS R S P+P LSSSS ++ RR W
Sbjct: 1 MASQVAILQTKL-PEIQPPCFSSTKSSARFFRSITMAPRPPVSHLSSSSPAAEIGDRRFW 60
Query: 61 NFPTTT----TRLSNMAVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+T+ +AVK+H LPL+SPHD N+ VLF GA GIWSE+TKIG AL
Sbjct: 61 NFPSTSFGNFQLRRRIAVKSHLKLNLPLISPHDQWGNWTVLFSVGAFGIWSEKTKIGSAL 120
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FPIV++FLLP +V LLLFRADL V+N T L A
Sbjct: 121 SGALVSTLVGLAASNVGIIASDAPAFPIVLEFLLPLSVLLLLFRADLRRVINSTGTLLLA 180
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGT +GT A+ +V MRS+ Y+ S S
Sbjct: 181 FLLGSVGTTIGTAVAYFLVPMRSLGQDNWKIAAALMGRHICGAVNYVASSGALGVSPSVM 240
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIP----PETKWMDEKIEYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P P + + + E +N KL LQ A AVS
Sbjct: 241 AAGLAADNVISAVYFATLFALASKLPAEPTPSSDNVKKDAEAEHNNKLPVLQSAICLAVS 300
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V+L TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 301 FAICKAGSYLTKHFGIQGGSMPAITAAVVILATIFPKPFAYLAPSGEAMAVILMQ---VF 360
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 414
F + NI S + T P I M+SLV+++VHL IT+GL KLLRFDLK LL+ASNA IG P
Sbjct: 361 FNVVGASGNIWSVINTAPSIFMFSLVQIAVHLAITVGLRKLLRFDLKLLLLASNANIGGP 420
BLAST of Sed0002008 vs. ExPASy Swiss-Prot
Match:
O31634 (Uncharacterized membrane protein YjcL OS=Bacillus subtilis (strain 168) OX=224308 GN=yjcL PE=4 SV=1)
HSP 1 Score: 101.7 bits (252), Expect = 2.1e-20
Identity = 89/393 (22.65%), Postives = 176/393 (44.78%), Query Frame = 0
Query: 80 LANFAVLFFAGALGIWSEETKIGRALSGALVATLLGLAANNLGIVASNASSFPIVMDFLL 139
L F ++ A ++G+ + K A+SGA++A + N+G++ + + V +++
Sbjct: 13 LWGFIAVWAAVSIGL-EQRFKWASAVSGAIIALAGAMVFTNVGVLPVESPVYDTVWSYVV 72
Query: 140 PSAVHLLLFRADLNHVLNPTEALFPALFLGSVGTIMGTVAAHLVVSMRSIYLD------- 199
P A+ LLLF+ ++ + + L + SVGT++G++ A ++ YLD
Sbjct: 73 PLAIPLLLFQINVRQIFKESRRLLFIFLISSVGTVLGSILAFFLLKQHIPYLDKIGGMIS 132
Query: 200 ------------MSNIYYESTETFALGFGAQNIIRAVYFAMLCALASRIPPETKW----- 259
M+ + E + A N + A+ F +L ++ P KW
Sbjct: 133 ASYIGGGVNFAAMAAKFETPGEYVSATVVADNFMMALLFFILISI-----PALKWFQRHY 192
Query: 260 ---MDEKIEYNNN-----------KKLSPLQFAKSHAVSFSICKVGFYLSKCLR------ 319
+EK++ + N K +S A + +F++ V +S +
Sbjct: 193 AMPFEEKVKADGNSGNSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYFKSIFSHP 252
Query: 320 ----IQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVFFLHLWERENIG 379
G V+T +TV+++ +FP F L S E ++ ++FF+ + ++
Sbjct: 253 LLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQELGTFLI----YLFFVVIGIPADLR 312
Query: 380 SALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDPTTACVIATTKS 425
+ P IL++ + +L +++ GKL R L+ +L+A NA +G PTTA +A K
Sbjct: 313 LIVTNAPLILLFVFIIAISNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMAIAKG 372
BLAST of Sed0002008 vs. ExPASy TrEMBL
Match:
A0A6J1CGH1 (uncharacterized protein LOC111011457 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 335 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 394
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 395 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 454
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 455 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 514
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 515 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 574
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 575 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 634
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 635 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 694
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 695 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 754
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 755 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 794
BLAST of Sed0002008 vs. ExPASy TrEMBL
Match:
A0A6J1CIC3 (uncharacterized protein LOC111011457 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 534 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 593
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 594 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 653
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 654 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 713
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 714 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 773
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 774 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 833
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 834 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 893
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 894 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 953
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 954 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 993
BLAST of Sed0002008 vs. ExPASy TrEMBL
Match:
A0A6J1CHF3 (uncharacterized protein LOC111011457 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 236/464 (50.86%), Postives = 301/464 (64.87%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL SK + Q+QLPC SS R S P+P +SSSS ++ RR W
Sbjct: 296 MASQVAILQSK-SPQLQLPCFSSTKSSARFFRSITMAPRPPVPPVSSSSPAAEIGDRRFW 355
Query: 61 NFPTTTTRLSNM----AVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+ ++ ++ AVK+H LPL+SPHD AN+ VLF GA GIWSE+TKIG AL
Sbjct: 356 NFPSNSSGNFHLRRCIAVKSHLKLNLPLISPHDQWANWTVLFSVGAFGIWSEKTKIGSAL 415
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FP+V++ LLP ++ LLLFRADL V+ T L A
Sbjct: 416 SGALVSTLVGLAASNVGIIASDAPAFPVVLELLLPLSIPLLLFRADLRRVIKSTGTLLLA 475
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGTI+GT A+ +V MRS+ Y+ +S S
Sbjct: 476 FLLGSVGTIIGTAVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISGALGVSPSVL 535
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P E + + E +N KL LQ A + AVS
Sbjct: 536 AAGLAADNVICAVYFATLFALASKVPAEPTPSSDNVGKDPEAEHNNKLPVLQSATALAVS 595
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V VVL TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 596 FAICKAGSYLTKHFGIQGGSMPAITAVIVVLATIFPKPFAYLAPSGEAMAVILMQ---VF 655
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 420
F + NI S + T P I M+SLV+++VHL +TIGLGKLLRFDLK LLIASNA +G P
Sbjct: 656 FTVVGASGNIWSVINTAPSIFMFSLVQIAVHLAMTIGLGKLLRFDLKLLLIASNANVGGP 715
Query: 421 TTACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
TTAC +AT K WSSM++P + GIFG+ I FL G++++ Y
Sbjct: 716 TTACGMATAKGWSSMVVPGILAGIFGIAIATFLGIGFGLMFLKY 755
BLAST of Sed0002008 vs. ExPASy TrEMBL
Match:
A0A6J1CJ32 (uncharacterized protein LOC111011457 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011457 PE=4 SV=1)
HSP 1 Score: 370.5 bits (950), Expect = 9.1e-99
Identity = 233/453 (51.43%), Postives = 289/453 (63.80%), Query Frame = 0
Query: 1 MASQLAILHSKLASQVQLPCLSSN----RIRISAMAVPQPSSLSLSSSSSSS---GRRLW 60
MASQ+AIL +KL ++Q PC SS R S P+P LSSSS ++ RR W
Sbjct: 1 MASQVAILQTKL-PEIQPPCFSSTKSSARFFRSITMAPRPPVSHLSSSSPAAEIGDRRFW 60
Query: 61 NFPTTT----TRLSNMAVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRAL 120
NFP+T+ +AVK+H LPL+SPHD N+ VLF GA GIWSE+TKIG AL
Sbjct: 61 NFPSTSFGNFQLRRRIAVKSHLKLNLPLISPHDQWGNWTVLFSVGAFGIWSEKTKIGSAL 120
Query: 121 SGALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPA 180
SGALV+TL+GLAA+N+GI+AS+A +FPIV++FLLP +V LLLFRADL V+N T L A
Sbjct: 121 SGALVSTLVGLAASNVGIIASDAPAFPIVLEFLLPLSVLLLLFRADLRRVINSTGTLLLA 180
Query: 181 LFLGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETF 240
LGSVGT +GT A+ +V MRS+ Y+ S S
Sbjct: 181 FLLGSVGTTIGTAVAYFLVPMRSLGQDNWKIAAALMGRHICGAVNYVASSGALGVSPSVM 240
Query: 241 ALGFGAQNIIRAVYFAMLCALASRIP----PETKWMDEKIEYNNNKKLSPLQFAKSHAVS 300
A G A N+I AVYFA L ALAS++P P + + + E +N KL LQ A AVS
Sbjct: 241 AAGLAADNVISAVYFATLFALASKLPAEPTPSSDNVKKDAEAEHNNKLPVLQSAICLAVS 300
Query: 301 FSICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVF 360
F+ICK G YL+K IQG S+P IT V+L TIFP+PFA+LAPSGEAMA+ILMQ VF
Sbjct: 301 FAICKAGSYLTKHFGIQGGSMPAITAAVVILATIFPKPFAYLAPSGEAMAVILMQ---VF 360
Query: 361 FLHLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDP 414
F + NI S + T P I M+SLV+++VHL IT+GL KLLRFDLK LL+ASNA IG P
Sbjct: 361 FNVVGASGNIWSVINTAPSIFMFSLVQIAVHLAITVGLRKLLRFDLKLLLLASNANIGGP 420
BLAST of Sed0002008 vs. ExPASy TrEMBL
Match:
A0A0A0L600 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183390 PE=4 SV=1)
HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 231/462 (50.00%), Postives = 294/462 (63.64%), Query Frame = 0
Query: 3 SQLAILHSKLASQVQLPCLSSNRIRI----SAMAVPQPSSLSLSSSSSSSG---RRLWNF 62
SQL ILHSK + ++Q PC SS + + S P SLSSSS ++ R W+F
Sbjct: 5 SQLTILHSK-SPELQTPCFSSTKFSVGFSRSISMATHPPLQSLSSSSLTAEITCPRFWSF 64
Query: 63 PTTTT----RLSNMAVKTH----LPLVSPHDHLANFAVLFFAGALGIWSEETKIGRALSG 122
++ ++AV++H LPLVSP+D N+ VLF GA GIWSE+TK+G ALSG
Sbjct: 65 RKSSNGNVQSRRDVAVRSHLKLNLPLVSPYDQWGNWTVLFSIGAFGIWSEKTKVGSALSG 124
Query: 123 ALVATLLGLAANNLGIVASNASSFPIVMDFLLPSAVHLLLFRADLNHVLNPTEALFPALF 182
ALV+TL+GLAA+N GI+AS+A +F IV++FLLP AV LLLFRADL V+ T L A
Sbjct: 125 ALVSTLVGLAASNFGIIASDAPAFAIVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAFL 184
Query: 183 LGSVGTIMGTVAAHLVVSMRSI---------------------YLDMSNIYYESTETFAL 242
LGSVGT +GTV A+ +V MRS+ Y+ +S+ S A
Sbjct: 185 LGSVGTTVGTVVAYFLVPMRSLGQDSWKIAAALMGRHIGGAVNYVAISDALGVSPSVLAA 244
Query: 243 GFGAQNIIRAVYFAMLCALASRIPPETKWMDEKI----EYNNNKKLSPLQFAKSHAVSFS 302
G A N+I AVYFA L ALAS++PPE +D + E + KL LQ A + AVSF+
Sbjct: 245 GLAADNVICAVYFATLFALASKVPPEPTTLDNGVGKDAEVEPSNKLPVLQSASAVAVSFA 304
Query: 303 ICKVGFYLSKCLRIQGSSLPVITVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVFFL 362
ICKVG YL+K IQG S+P IT V VVL TIFP+ FA+LAPSGEAMA+ILMQ VFF
Sbjct: 305 ICKVGSYLTKYFGIQGGSMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQ---VFFA 364
Query: 363 HLWERENIGSALKTTPYILMYSLVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDPTT 422
+ N+ S + T P I +++ V++SVHLVI IGLGKLLRFDLKSLLIASNA +G PTT
Sbjct: 365 VVGASGNVWSVINTAPSIFLFAFVQISVHLVIIIGLGKLLRFDLKSLLIASNANVGGPTT 424
Query: 423 ACVIATTKSWSSMLIPRVFTGIFGVPIGMFLTTWLGMLYVAY 425
AC +AT K WSSM+IP + GIFG+ + FL GM+ + Y
Sbjct: 425 ACGMATAKGWSSMVIPGILAGIFGIAMATFLGIGFGMMVLKY 462
BLAST of Sed0002008 vs. TAIR 10
Match:
AT5G52540.1 (Protein of unknown function (DUF819) )
HSP 1 Score: 286.2 bits (731), Expect = 4.3e-77
Identity = 183/430 (42.56%), Postives = 253/430 (58.84%), Query Frame = 0
Query: 28 ISAMAVPQPSSLSLSSSSSSSGRRLWNF---------PTTTTRLSNMAVKT-HLPLVSPH 87
+S +P+ S+ S SS S S L F P +++ + ++ V + PL+SP+
Sbjct: 29 VSRQDLPEFSAKSTSSRLSFSPASLSQFRNGTDRFLSPESSSPIRSVTVSSLSTPLISPN 88
Query: 88 DHLANFAVLFFAGALGIWSEETKIGRALSGALVATLLGLAANNLGIVASNASSFPIVMDF 147
D + LF GALG+WSE+TK+G A+SGALV+TL+GLAA+NLGI++S A +F +V++F
Sbjct: 89 DEWGTWTALFATGALGLWSEKTKVGAAMSGALVSTLVGLAASNLGIISSQAPAFAVVLNF 148
Query: 148 LLPSAVHLLLFRADLNHVLNPTEALFPALFLGSVGTIMGTVAAHLVVSMRSI-------- 207
LLP AV LLLFRADL V+ T L A +GSV T +GT A+ +V M+S+
Sbjct: 149 LLPLAVPLLLFRADLRRVVQSTGKLLLAFLIGSVATTVGTALAYYLVPMKSLGPDSWKIA 208
Query: 208 -------------YLDMSNIYYESTETFALGFGAQNIIRAVYFAMLCALASRI-----PP 267
Y+ +SN + A G A N+I AVYF L AL S+I PP
Sbjct: 209 AALMGRHIGGAVNYVAISNALGVTPSVLAAGLAADNVICAVYFTTLFALGSKIPAEAVPP 268
Query: 268 ETKWMD-EKIEYNNNK-KLSPLQFAKSHAVSFSICKVGFYLSKCLRIQGSSLPVITVVTV 327
T +D E E + K K+ L A AVS +ICK G L+K I G SLP IT V V
Sbjct: 269 PTTIVDAETNEASETKNKIPVLLIATGIAVSLAICKAGALLTKYFGISGGSLPAITAVVV 328
Query: 328 VLVTIFPEPFAWLAPSGEAMAMILMQVTHVFFLHLWERENIGSALKTTPYILMYSLVELS 387
+L T+FP F LAPSGEAMA+ILMQ VFF + NI S + T P I +++LV++
Sbjct: 329 ILATVFPSQFGRLAPSGEAMALILMQ---VFFTVVGASGNIWSVINTAPSIFLFALVQIG 388
Query: 388 VHLVITIGLGKLLRFDLKSLLIASNAIIGDPTTACVIATTKSWSSMLIPRVFTGIFGVPI 420
HL + +G+GKLL +L+ LL+ASNA +G PTTA +AT K W+S+++P + GIFG+ I
Sbjct: 389 THLAVILGIGKLLNIELRLLLLASNANVGGPTTAAGMATAKGWNSLIVPGILAGIFGIAI 448
BLAST of Sed0002008 vs. TAIR 10
Match:
AT5G24000.1 (Protein of unknown function (DUF819) )
HSP 1 Score: 266.9 bits (681), Expect = 2.7e-71
Identity = 172/435 (39.54%), Postives = 244/435 (56.09%), Query Frame = 0
Query: 34 PQPSSLSLSS----------SSSSSGRRLWNFPTTTT---------RLSNMAVKTHLPLV 93
P P S ++SS SSS + RR + P T T R + + PL+
Sbjct: 10 PNPLSPTISSLHVSPSRHHLSSSITIRRNKSPPVTLTPHRLVSSRRRRVKVYSQLRFPLI 69
Query: 94 SPHDHLANFAVLFFAGALGIWSEETKIGRALSGALVATLLGLAANNLGIVASNASSFPIV 153
SP DH + +A LF AGA G+WSE+TKIG +SGAL +TLLGLAA+NL ++ S+
Sbjct: 70 SPDDHWSQWAALFAAGAFGVWSEKTKIGSMVSGALTSTLLGLAASNLRLIPFETPSYGFF 129
Query: 154 MDFLLPSAVHLLLFRADLNHVLNPTEALFPALFLGSVGTIMGTVAAHLVVSMRSI----- 213
M+FLLP + LLLFRADL ++ T +L A +GSV TI+GTV A ++V MRS+
Sbjct: 130 MEFLLPHTIPLLLFRADLRRIIRSTGSLLLAFLIGSVATIVGTVVAFMLVPMRSLGPDNW 189
Query: 214 ----------------YLDMSNIYYESTETFALGFGAQNIIRAVYFAMLCALASRIPPET 273
++ +S S A G N+I A++F +L ALAS+IPPET
Sbjct: 190 KIAAALMGSYIGGSLNFVAISEALQISPSVIAAGVAVDNVICALHFMVLFALASKIPPET 249
Query: 274 ---------KWMDEKIEYNNNKKLSPLQFAKSHAVSFSICKVGFYLSKCLRIQGSSLPVI 333
D+K+E N + + +VSF ICK L+ +IQG LP +
Sbjct: 250 ASASSPDADMTKDDKLEDKNRVVSTSIAL----SVSFLICKAAITLTTLFKIQGVMLPAV 309
Query: 334 TVVTVVLVTIFPEPFAWLAPSGEAMAMILMQVTHVFFLHLWERENIGSALKTTPYILMYS 393
T +T+VL T FP+ F LAPS E +++ILMQ VFF L ++ + + T P I +++
Sbjct: 310 TAITIVLATSFPDFFNSLAPSAETISLILMQ---VFFTILGATGSVWNVINTAPSIFLFA 369
Query: 394 LVELSVHLVITIGLGKLLRFDLKSLLIASNAIIGDPTTACVIATTKSWSSMLIPRVFTGI 420
+++ VHL +T+ LGKL D+K LL+ASNA IG PTTAC +AT K W+S+++P + +G+
Sbjct: 370 AIQVMVHLAVTLVLGKLFCIDMKLLLLASNANIGGPTTACAMATAKGWTSLVVPGILSGV 429
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022140905.1 | 8.2e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X3 [Momordica charantia] | [more] |
XP_022140902.1 | 8.2e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X1 [Momordica charantia] | [more] |
XP_022140906.1 | 8.2e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X4 [Momordica charantia] | [more] |
XP_038877446.1 | 5.3e-101 | 51.40 | uncharacterized membrane protein YjcL-like [Benincasa hispida] | [more] |
XP_022140903.1 | 1.9e-98 | 51.43 | uncharacterized protein LOC111011457 isoform X2 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
O31634 | 2.1e-20 | 22.65 | Uncharacterized membrane protein YjcL OS=Bacillus subtilis (strain 168) OX=22430... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CGH1 | 3.9e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CIC3 | 3.9e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CHF3 | 3.9e-102 | 50.86 | uncharacterized protein LOC111011457 isoform X4 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CJ32 | 9.1e-99 | 51.43 | uncharacterized protein LOC111011457 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A0A0L600 | 1.0e-97 | 50.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183390 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G52540.1 | 4.3e-77 | 42.56 | Protein of unknown function (DUF819) | [more] |
AT5G24000.1 | 2.7e-71 | 39.54 | Protein of unknown function (DUF819) | [more] |