Sed0002006 (gene) Chayote v1

Overview


Name	Sed0002006
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rac-like GTP-binding protein ARAC7
Location	LG10: 29768590 .. 29772389 (+)
RNA-Seq Expression	Sed0002006
Synteny	Sed0002006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCACAGGGACCCATCTTCAGGTACACCATTCCAGAGACAAATAATAATAATAAATAAAAAGTCCCTCTTGTTTCGTGCCTTTCAAAACCTTTGTCTCTGAGATTTGAAAGATTTCAAGAGGGATACTAAGAAGAAATTTCAGTAAGCATAAAACCCCTTTTCCAGTTTCCGCCATTGTTACTCCTCAAACCCCATTCCTTTTGGAGAATGAGCGCTTCCAAGTTCATTAAATGCGTTACTGTGGGAGATGGAGCTGTTGGGAAGACGTGTATGCTCATCTGTTACACCAGCAATAAGTTCCCCACTGTGAGGCCCTCTTTCTTAAATGTTTCATTTTCTGTTTTTGTGTTTCATTGAATGCCTTAATCTTTCTGCAGGTTATGAGTTTTGTTTCTTGCTCTTTGTAGATTGGCTGATTTTGTGTCAATGCCCTTTTCATGGGGGGTTTTTTATGCCCTCTTTTGTTTACTTGGAATTTGTGTTCCAATTGAAAATGGAGCTCTCTTTCCCTGTCTCTCAACATGCATGGGGGAATTTTTCCCCATTTTATTTGAGTGTGAAAACTGTGCTAGTACATTAGCCCTGAACCTTGAGCCCTGATAATGGTGTTCTTTTTCTCCCAATATTGATGATTTTCTATGAGCATAACTCAACTGATGTACTCATTTTTTTTAACAATATAAGGTTGTGAGTCTCCAATTTCCTTATTGTACCATAGAAAAAACATTGATATTAATCATTGTGGAGTGTGACATAGTGGTCTTGTTCAATATCTGCATAGTAATTAGTTTGTTACGGTTTTTCTTGACATCCAAATGTTAGGGGTGTGTTTGGGCCCCCGTTTATGTAAACGGTGGGGTTGGTTCTAATAACTCAACCGATGTTTGTCCCACTATTGATTATAAACGGTGATTACCTAAACGTGCATGCCCGTTTATCTAAACCTTACATATATTACTTTTTGTTACATAACCAGCTCTTCAAACACCGTTTATCAAAATCCCTGTTATAATAGCTTTCCACTCAAACATTATTTATAATAGCCCACGGTTTATTATAACCCTCCGTTTAACATAGTCTTCTGTCTATCATAATCAAACCGGTGCTCCAAACACACCCTAGAGGTTCAGGGGGTAAAACATGGATGTTTTTCGCCGCAAATTCCAAGTTTGAGCAGTTGAAAATGGAGATTTTTCTTCTCATATCTCTAAATATTTGTGATTTTCTCCAGTTTTCTTATCTTTCTTTAAAAAATGAGCTACAAGTACATAAGCACTAAGCTCGAGCAGTTGAAAATGGACTCTCTCTTCATATTGATGATATTTTGTTTTTTGACATTTTCTTTTCTTTTCTTAGTAAATGACTCTTTCTTTCAACGTTGGTTGTGGGTTTCTCCCACTTTCTTCCTTTCTTTAAAAATGTGAATTGTAATTACATAAACAGCTCAAGCAGTTGAAACTGAAGTTCTCTCTCAACATTTGTTGTTTATTCATTGAATATGGGCTTCAAGTACATGAACACTTGAGCTGTTAAAATGAAATCTTTCTCTCTCTCAACATGGATGGATTCTGATAAGTTCCAACTTCTTTTGATATCAAAGATAAAGAAAATACATAGATAATCCAAGTAATTCGAGATATTTGGAGCCTCCTCGGATTACTCAAGCCCTAAATCATTTCCAAAATATTGTGTATTTCTCCCTTACAAGTCTTTCTTATTTATAACCACAATACTCTAACTAACTTCCAACTAACTGCCCTATTTCCTTATAATATTCCTAATAGAAATCCTATAGATTCCTCCTATTTTCTTGCTTTCTTTAAATATGAGCTACAAGTCAAACACTAAGCTTGAGCAGTTTCATATGGATTCTCTCTGTCTCTCTCTAAATTTTGGTGGTTTGTTTGGCAGGATTATATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTCAATTTGGGATTATGGGACACTGCAGGTACATATATAAACTCCTTGAATGAGAAGGCCCTTCTTTTTTATTTCATTGATGAGTTAAGTTTGCTTCAGAATCAGGTTTTTATCTGCTTGACTGAGTTATCATCTTTATTGTTTCTCCTTTGTTTTGAAGGTCAAGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTACTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGGTACTGATTTTTTATTTTAGAAACCTTAGTATTAGGGTCAGTTTAGCTATTGGTTTACTATAAGTTTAAATCTGACACCAAAATCAAAATTTGAAAATTAAACTGACCAAACCAACTACTGTTGTTTGACCCAACTCAACTAAAATGTCTGTTTGGAATGATTTTCTAAGCGCTTACAAATATGTGCTTTTAAGTGCAGTAAAATAAATTTTGAGCACTTAGAAATTCATTCCATACATGTGAGGTTACTTCAACAGGCATTCTTTCAGAACAATAGTAGAGTCTAAAGAAAAACTATCAAACAAGTTTTCACTTAACTTACTTTTCATCCCTTCAAGATATATATATTTTTCAAGTACTGTATTGCTTTGTTTAATTCTCCCGTAGCATTTAACTATAATGCTTTATTTTGATTTCTCAGTGGATGCCCGAACTGCGTAGATTTGCGCCCAATGTTCCAATCATTCTAGTTGGTACCAAGCTCGGTAGGTAGACAAAAGTTATTCACCAATCATTTGATGCTACATTTGGTTTTATTAATGTCCATTCAAGTAAATCTACGAACAACATCAACAAAACTTGTCTCCATTCGTTTTAGATCTTCGTGAAGATCGACGATATTCGAATGAGCAAATGGGATACGACGTCATTACAACCTCTCAGGTTCACTTCCTCAATCCTTATTTCTTCTCTTTCTAATGTGAACTGTGATGCAACATTTCTAGAAAGGGAAGCTCAACTTTGTCGAATTGAACATTAACAAACAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTATATTGAGTGCAGTTCTAAGACACAACAGGTAGACAATTCAACCTATGGAAAGATGTTCTAATTTTTGTGGAAATTTTAATACTTTTTTCTTTAAGCTGTATAATTATACCTAAAAAAGGAAAAAAGGCATGTCCTTGGATGAACATTATCTAACTGGACCTTGTGGTTGATTATTTAGAATGTCAAATCTGTATTTGATACTGCCATTAAGGTTGTTATGCAACCTCCAAGGAGAAGAGAAGTGACCAGGAAGATAAGGCATCGAGGATCCGGCTGCTCGTTTGCGTAAGTAGCACCCCTGAGTTCTGTTGAGCCGTTTCTTACTCTCACCCTTAATTACATAATCATGTTATTGACATGTGTAAAACTATGGCAGGAGCATCGTTTGTGGAGGCTGTGCTGCTTAGAACATGCCATACTGCTGGAAGCTCGAGAGGACCTATTTTGTGGAGGCTATGCTTCGTGACCGGTCAAGCTCGCCTCACAGTTATCGCACCTCTCTATGTATTTGTTGATCTGTGTTGTGGCTACATTAGGTTAACTAGTAGTGGAAGAGAAGGGCATATGGAGCTCCACATTTTGGCCATAACTTGAAAATTAGAGGGAATTGTTCATTCTCTCAAAGACCTTAGGAGGGAGGGTGTATATTGTAGCCTTTTTCTGTTATGCTTATACAATGTCACAACTCTTTCAATCTGCTACAATTCGTTCTATGATATTGCATCGATTTGATTAGATACCGCTTGATTGAGA

mRNA sequence

ACCACAGGGACCCATCTTCAGGTACACCATTCCAGAGACAAATAATAATAATAAATAAAAAGTCCCTCTTGTTTCGTGCCTTTCAAAACCTTTGTCTCTGAGATTTGAAAGATTTCAAGAGGGATACTAAGAAGAAATTTCAGTAAGCATAAAACCCCTTTTCCAGTTTCCGCCATTGTTACTCCTCAAACCCCATTCCTTTTGGAGAATGAGCGCTTCCAAGTTCATTAAATGCGTTACTGTGGGAGATGGAGCTGTTGGGAAGACGTGTATGCTCATCTGTTACACCAGCAATAAGTTCCCCACTGATTATATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTCAATTTGGGATTATGGGACACTGCAGGTCAAGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTACTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGTGGATGCCCGAACTGCGTAGATTTGCGCCCAATGTTCCAATCATTCTAGTTGGTACCAAGCTCGATCTTCGTGAAGATCGACGATATTCGAATGAGCAAATGGGATACGACGTCATTACAACCTCTCAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTATATTGAGTGCAGTTCTAAGACACAACAGAATGTCAAATCTGTATTTGATACTGCCATTAAGGTTGTTATGCAACCTCCAAGGAGAAGAGAAGTGACCAGGAAGATAAGGCATCGAGGATCCGGCTGCTCGTTTGCGAGCATCGTTTGTGGAGGCTGTGCTGCTTAGAACATGCCATACTGCTGGAAGCTCGAGAGGACCTATTTTGTGGAGGCTATGCTTCGTGACCGGTCAAGCTCGCCTCACAGTTATCGCACCTCTCTATGTATTTGTTGATCTGTGTTGTGGCTACATTAGGTTAACTAGTAGTGGAAGAGAAGGGCATATGGAGCTCCACATTTTGGCCATAACTTGAAAATTAGAGGGAATTGTTCATTCTCTCAAAGACCTTAGGAGGGAGGGTGTATATTGTAGCCTTTTTCTGTTATGCTTATACAATGTCACAACTCTTTCAATCTGCTACAATTCGTTCTATGATATTGCATCGATTTGATTAGATACCGCTTGATTGAGA

Coding sequence (CDS)

ATGAGCGCTTCCAAGTTCATTAAATGCGTTACTGTGGGAGATGGAGCTGTTGGGAAGACGTGTATGCTCATCTGTTACACCAGCAATAAGTTCCCCACTGATTATATTCCCACAGTGTTTGACAATTTCAGTGCCAATGTGTCTGTGGATGGGAACATTGTCAATTTGGGATTATGGGACACTGCAGGTCAAGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCAGATGTGTTTGTACTAGCTTTCTCATTAATTAGTAGAGCCAGCTATGAAAATATCCTCAAGAAGTGGATGCCCGAACTGCGTAGATTTGCGCCCAATGTTCCAATCATTCTAGTTGGTACCAAGCTCGATCTTCGTGAAGATCGACGATATTCGAATGAGCAAATGGGATACGACGTCATTACAACCTCTCAGGGTGAGGAGCTGAGAAAACAAATTGGTGCTTCAGCTTATATTGAGTGCAGTTCTAAGACACAACAGAATGTCAAATCTGTATTTGATACTGCCATTAAGGTTGTTATGCAACCTCCAAGGAGAAGAGAAGTGACCAGGAAGATAAGGCATCGAGGATCCGGCTGCTCGTTTGCGAGCATCGTTTGTGGAGGCTGTGCTGCTTAG

Protein sequence

MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLDLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPPRRREVTRKIRHRGSGCSFASIVCGGCAA

Homology

[Close]

BLAST of Sed0002006 vs. NCBI nr
Match: XP_038889516.1 (rac-like GTP-binding protein ARAC7 isoform X2 [Benincasa hispida])

HSP 1 Score: 412.5 bits (1059), Expect = 2.1e-111
Identity = 201/209 (96.17%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYDVIT+SQGEELRKQIGASAYIECS+KTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDVITSSQGEELRKQIGASAYIECSAKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK RHRGSGCSF SI+CGGCAA
Sbjct: 181 PRRREVTRKKRHRGSGCSFTSIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. NCBI nr
Match: XP_038889515.1 (rac-like GTP-binding protein ARAC7 isoform X1 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110
Identity = 201/210 (95.71%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYDVIT+SQGEELRKQIGASAYIECS+KTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDVITSSQGEELRKQIGASAYIECSAKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFA-SIVCGGCAA 210
           PRRREVTRK RHRGSGCSF  SI+CGGCAA
Sbjct: 181 PRRREVTRKKRHRGSGCSFTRSIICGGCAA 210

[Close]

BLAST of Sed0002006 vs. NCBI nr
Match: XP_022157599.1 (rac-like GTP-binding protein ARAC7 isoform X1 [Momordica charantia])

HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110
Identity = 198/209 (94.74%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANV+VDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVAVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYD+IT+SQGEELRKQIGASAYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDIITSSQGEELRKQIGASAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK R RGS CSFASI+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSACSFASIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. NCBI nr
Match: XP_022157600.1 (rac-like GTP-binding protein ARAC7 isoform X2 [Momordica charantia])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 198/210 (94.29%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANV+VDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVAVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYD+IT+SQGEELRKQIGASAYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDIITSSQGEELRKQIGASAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFA-SIVCGGCAA 210
           PRRREVTRK R RGS CSFA SI+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSACSFARSIICGGCAA 210

[Close]

BLAST of Sed0002006 vs. NCBI nr
Match: XP_004139348.1 (rac-like GTP-binding protein ARAC7 isoform X2 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 196/209 (93.78%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVSVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQM YDVIT++QGEELRKQIGASAYIECS+KTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMHYDVITSAQGEELRKQIGASAYIECSAKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK R RGSGCSF+ I+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSGCSFSRIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot
Match: O82480 (Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana OX=3702 GN=ARAC7 PE=1 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.5e-99
Identity = 179/210 (85.24%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV+VDG IVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGAD+FVLAFSLIS+ASYEN+LKKWMPELRRFAPNVPI+LVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLR+D+ Y  +    +VIT++QGEELRKQIGA+AYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLRDDKGYLADHT--NVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIR-HRGSGCSFASIVCGGCAA 210
           PRR+EV R+ + HR SGCS ASIVCGGC A
Sbjct: 181 PRRKEVPRRRKNHRRSGCSIASIVCGGCTA 208

[Close]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot
Match: Q68Y52 (Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC2 PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.4e-95
Identity = 170/206 (82.52%), Postives = 185/206 (89.81%), Query Frame = 0


Query: 3   ASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTA 62
           A+KFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTA
Sbjct: 4   ATKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTA 63

Query: 63  GQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLDL 122
           GQEDYSRLRPLSYRGAD+FVLAFSLISRASYEN+LKKWMPELRRFAPNVPI+LVGTKLDL
Sbjct: 64  GQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDL 123

Query: 123 REDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPPR 182
           R+ R Y  +      ITT+QGEELRKQIGA+AYIECSSKTQQN+K+VFDTAIKVV+QPPR
Sbjct: 124 RDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVFDTAIKVVLQPPR 183

Query: 183 RREVT---RKIRHRGSGCSFASIVCG 206
           RR  T   RK   R +GCS  +++CG
Sbjct: 184 RRGETTMARKKTRRSTGCSLKNLMCG 209

[Close]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot
Match: Q9SSX0 (Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC1 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.0e-89
Identity = 158/204 (77.45%), Postives = 176/204 (86.27%), Query Frame = 0


Query: 2   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 61
           +A++FIKCVTVGDGAVGKTCMLICYT NKFPTDYIPTVFDNFSANVSVDG++VNLGLWDT
Sbjct: 6   AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDT 65

Query: 62  AGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLD 121
           AGQEDYSRLRPLSYRGADVF+L+FSLISRASYEN+ KKWMPELRRFAP VP++LVGTKLD
Sbjct: 66  AGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLD 125

Query: 122 LREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPP 181
           LREDR Y  +     +ITT QGEELRK IGA AYIECSSKTQ+N+K+VFDTAIKVV+QPP
Sbjct: 126 LREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQPP 185

Query: 182 RRREVTRKIRHRGSGCSFASIVCG 206
           R ++VTRK     S        CG
Sbjct: 186 RHKDVTRKKLQSSSNRPVRRYFCG 209

[Close]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot
Match: Q9SU67 (Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana OX=3702 GN=ARAC8 PE=1 SV=2)

HSP 1 Score: 317.8 bits (813), Expect = 9.3e-86
Identity = 155/204 (75.98%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 2   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 61
           SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS NV V+G  VNLGLWDT
Sbjct: 4   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63

Query: 62  AGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLD 121
           AGQEDY+RLRPLSYRGADVFVLAFSLISRASYEN+ KKW+PEL+ FAP VPI+LVGTK+D
Sbjct: 64  AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123

Query: 122 LREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPP 181
           LREDR Y ++  G   +TTSQGEELRK IGA+ YIECSSKTQQNVK+VFD AIKVV++P 
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKPA 183

Query: 182 RRREVTRKIRHRGSGCSFASIVCG 206
            +++  +K +   SGC  ++I+CG
Sbjct: 184 VKQKEKKKKQKPRSGC-LSNILCG 206

[Close]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot
Match: Q6Z808 (Rac-like GTP-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC3 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-85
Identity = 155/204 (75.98%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 2   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 61
           SAS+FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV VD   VNLGLWDT
Sbjct: 4   SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDT 63

Query: 62  AGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLD 121
           AGQEDY+RLRPLSYRGADVFVLAFSL+SRASYENI+KKW+PEL+ +AP VPI+LVGTKLD
Sbjct: 64  AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPIVLVGTKLD 123

Query: 122 LREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPP 181
           LRED+ Y  +  G   +TT+QGEELRKQIGA+ YIECSSKTQQNVK VFD AIKVV+QPP
Sbjct: 124 LREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDAAIKVVIQPP 183

Query: 182 RRREVTRKIRHRGSGCSFASIVCG 206
            ++   +K + R  GCS  ++  G
Sbjct: 184 TKQREKKKKKSR-QGCSMMNMFRG 206

[Close]

BLAST of Sed0002006 vs. ExPASy TrEMBL
Match: A0A6J1DWX8 (rac-like GTP-binding protein ARAC7 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024251 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 198/209 (94.74%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANV+VDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVAVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYD+IT+SQGEELRKQIGASAYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDIITSSQGEELRKQIGASAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK R RGS CSFASI+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSACSFASIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. ExPASy TrEMBL
Match: A0A6J1KFN3 (rac-like GTP-binding protein ARAC7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493867 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.2e-109
Identity = 196/209 (93.78%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 2   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 61

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 62  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 121

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYD+IT+SQGEELRKQIGASAYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 122 DLREDRRYANEQMGYDIITSSQGEELRKQIGASAYIECSSKTQQNVKAVFDTAIKVVLQP 181

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRRE+ +K   RGSGCSF SI+CGGCAA
Sbjct: 182 PRRRELPKKKTRRGSGCSFTSIICGGCAA 210

[Close]

BLAST of Sed0002006 vs. ExPASy TrEMBL
Match: A0A0A0LKT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G003580 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.2e-109
Identity = 196/209 (93.78%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVSVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQM YDVIT++QGEELRKQIGASAYIECS+KTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMHYDVITSAQGEELRKQIGASAYIECSAKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK R RGSGCSF+ I+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSGCSFSRIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. ExPASy TrEMBL
Match: A0A6J1DTJ2 (rac-like GTP-binding protein ARAC7 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024251 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.2e-109
Identity = 198/210 (94.29%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANV+VDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVAVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQMGYD+IT+SQGEELRKQIGASAYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMGYDIITSSQGEELRKQIGASAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFA-SIVCGGCAA 210
           PRRREVTRK R RGS CSFA SI+CGGCAA
Sbjct: 181 PRRREVTRKKRRRGSACSFARSIICGGCAA 210

[Close]

BLAST of Sed0002006 vs. ExPASy TrEMBL
Match: A0A5D3CFG7 (Rac-like GTP-binding protein ARAC7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00370 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 197/209 (94.26%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLREDRRY+NEQM YDVIT+SQGEELRKQIGASAYIECS+KTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLREDRRYANEQMHYDVITSSQGEELRKQIGASAYIECSAKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCSFASIVCGGCAA 210
           PRRREVTRK R +GSGCSF  I+CGGCAA
Sbjct: 181 PRRREVTRKKRWQGSGCSFTRIICGGCAA 209

[Close]

BLAST of Sed0002006 vs. TAIR 10
Match: AT4G28950.1 (RHO-related protein from plants 9 )

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-100
Identity = 179/210 (85.24%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV+VDG IVNLGLWD
Sbjct: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDYSRLRPLSYRGAD+FVLAFSLIS+ASYEN+LKKWMPELRRFAPNVPI+LVGTKL
Sbjct: 61  TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLR+D+ Y  +    +VIT++QGEELRKQIGA+AYIECSSKTQQNVK+VFDTAIKVV+QP
Sbjct: 121 DLRDDKGYLADHT--NVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 181 PRRREVTRKIR-HRGSGCSFASIVCGGCAA 210
           PRR+EV R+ + HR SGCS ASIVCGGC A
Sbjct: 181 PRRKEVPRRRKNHRRSGCSIASIVCGGCTA 208

[Close]

BLAST of Sed0002006 vs. TAIR 10
Match: AT3G48040.1 (RHO-related protein from plants 10 )

HSP 1 Score: 317.8 bits (813), Expect = 6.6e-87
Identity = 155/204 (75.98%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 2   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 61
           SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS NV V+G  VNLGLWDT
Sbjct: 4   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63

Query: 62  AGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLD 121
           AGQEDY+RLRPLSYRGADVFVLAFSLISRASYEN+ KKW+PEL+ FAP VPI+LVGTK+D
Sbjct: 64  AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123

Query: 122 LREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQPP 181
           LREDR Y ++  G   +TTSQGEELRK IGA+ YIECSSKTQQNVK+VFD AIKVV++P 
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVIKPA 183

Query: 182 RRREVTRKIRHRGSGCSFASIVCG 206
            +++  +K +   SGC  ++I+CG
Sbjct: 184 VKQKEKKKKQKPRSGC-LSNILCG 206

[Close]

BLAST of Sed0002006 vs. TAIR 10
Match: AT5G62880.1 (RAC-like 10 )

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-84
Identity = 152/207 (73.43%), Postives = 180/207 (86.96%), Query Frame = 0


Query: 2   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 61
           SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV V+G  VNLGLWDT
Sbjct: 4   SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63

Query: 62  AGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKLD 121
           AGQEDY+RLRPLSYRGADVFVL+FSL+SRASYEN+ KKW+PEL+ FAP VP++LVGTKLD
Sbjct: 64  AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123

Query: 122 LREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP- 181
           LRED+ Y  +  G   +TT+QGEELRK IGA+ YIECSSKTQQNVK+VFD+AIK V++P 
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVIKPL 183

Query: 182 PRRREVTRKIRHRGS--GCSFASIVCG 206
            +++E T+K + + S  GC  ++++CG
Sbjct: 184 VKQKEKTKKKKKQKSNHGC-LSNVLCG 209

[Close]

BLAST of Sed0002006 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-83
Identity = 148/198 (74.75%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDGN +NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDY+RLRPLSYRGADVF+LAFSL+S+ASYEN+ KKW+PELR +AP VPIILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLR+D+++  E  G   I+T+QGEEL+K IGA AYIECS+KTQQNVK+VFD AIKVV+QP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCS 199
           P+ ++  +K R    GCS
Sbjct: 181 PKNKK--KKKRKSQKGCS 196

[Close]

BLAST of Sed0002006 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-83
Identity = 148/198 (74.75%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWD 60
           MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDGN +NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYSRLRPLSYRGADVFVLAFSLISRASYENILKKWMPELRRFAPNVPIILVGTKL 120
           TAGQEDY+RLRPLSYRGADVF+LAFSL+S+ASYEN+ KKW+PELR +AP VPIILVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLREDRRYSNEQMGYDVITTSQGEELRKQIGASAYIECSSKTQQNVKSVFDTAIKVVMQP 180
           DLR+D+++  E  G   I+T+QGEEL+K IGA AYIECS+KTQQNVK+VFD AIKVV+QP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

Query: 181 PRRREVTRKIRHRGSGCS 199
           P+ ++  +K R    GCS
Sbjct: 181 PKNKK--KKKRKSQKGCS 196

The following BLAST results are available for this feature:

BLAST of Sed0002006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889516.1	2.1e-111	96.17	rac-like GTP-binding protein ARAC7 isoform X2 [Benincasa hispida]	[more]
XP_038889515.1	5.2e-110	95.71	rac-like GTP-binding protein ARAC7 isoform X1 [Benincasa hispida]	[more]
XP_022157599.1	5.2e-110	94.74	rac-like GTP-binding protein ARAC7 isoform X1 [Momordica charantia]	[more]
XP_022157600.1	1.3e-108	94.29	rac-like GTP-binding protein ARAC7 isoform X2 [Momordica charantia]	[more]
XP_004139348.1	1.3e-108	93.78	rac-like GTP-binding protein ARAC7 isoform X2 [Cucumis sativus]	[more]

BLAST of Sed0002006 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82480	1.5e-99	85.24	Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana OX=3702 GN=ARAC7 PE=1...	[more]
Q68Y52	6.4e-95	82.52	Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC2 ...	[more]
Q9SSX0	4.0e-89	77.45	Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC1 ...	[more]
Q9SU67	9.3e-86	75.98	Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana OX=3702 GN=ARAC8 PE=1...	[more]
Q6Z808	1.6e-85	75.98	Rac-like GTP-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC3 ...	[more]

BLAST of Sed0002006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWX8	2.5e-110	94.74	rac-like GTP-binding protein ARAC7 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KFN3	6.2e-109	93.78	rac-like GTP-binding protein ARAC7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0LKT2	6.2e-109	93.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G003580 PE=3 SV=1	[more]
A0A6J1DTJ2	6.2e-109	94.29	rac-like GTP-binding protein ARAC7 isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3CFG7	1.4e-108	94.26	Rac-like GTP-binding protein ARAC7 isoform X2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Sed0002006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28950.1	1.1e-100	85.24	RHO-related protein from plants 9	[more]
AT3G48040.1	6.6e-87	75.98	RHO-related protein from plants 10	[more]
AT5G62880.1	1.8e-84	73.43	RAC-like 10	[more]
AT4G35020.1	1.2e-83	74.75	RAC-like 3	[more]
AT4G35020.2	1.2e-83	74.75	RAC-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 109..122 score: 54.94 coord: 155..177 score: 34.64 coord: 30..46 score: 32.53 coord: 47..69 score: 47.94 coord: 7..28 score: 44.34
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..197 e-value: 0.009 score: -8.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..180 e-value: 1.7E-23 score: 94.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..180 e-value: 2.9E-27 score: 106.6
None	No IPR available	PANTHER	PTHR24072:SF346	RAC-LIKE GTP-BINDING PROTEIN ARAC7	coord: 1..203
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..204 score: 21.213955
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..177 score: 25.326321
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..178 e-value: 2.48557E-128 score: 356.849
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..180 e-value: 4.5E-110 score: 381.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..178 e-value: 2.5E-52 score: 176.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..203 score: 18.214487
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 5..172 e-value: 6.7E-33 score: 111.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..183 e-value: 3.2E-71 score: 240.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..178
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002006.1	Sed0002006.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding