Sed0001998 (gene) Chayote v1

Overview


Name	Sed0001998
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein
Location	LG08: 38771982 .. 38774625 (-)
RNA-Seq Expression	Sed0001998
Synteny	Sed0001998

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAGAAAAAGGCGAAAAAAATGCAAAGAATCAGAGACACAGCTTTTTCCTCAGTTTTCGCCATTTTTCAGCTTTTTCTGTTCTTCTCTTCCGCTCATTTTCTCTGTAAAAACCTGTGAGATCTATGAAATCTCCTCTCTTATTTTCTCATCCTTTTCTTATCCAGTCTTCCAATTTCCTTTCCCAATTCAAAATCTTATGCCTTTAACCCTAATTCTCAGATCCCTTCAGTCCAGTTCTTGATTCCCTGCAAATCCCATTTCGGTTTTACGCTTCCCCTTTCGATTTCAGCCCTGACCCATCTTCCCTTTTCCTCAATTTTCCCCTTTTCTGTGTGATAATGGCGTCTTTGCGCCCAGATCTGACATCCAAGATCTACCCAGAACCTGATTCTTTCTGTATCGACCACTTTGATCGCCTTCCGGATTCCCTTCTTCTCCTTATCTTCAACCAGATCGGCGACGTCAAGGCTCTCGGCCGATGCTGCGTTGTTTCTCGAAGATTCCACTGCCTTGTCCCTCAAGTCGACAACGTTCTTGTTCGTGTGGATTGTGTTATTTCTGATGACGATTCGTCTTCTTCCTCCTCCGCCTCTGGTAAATCTCGTGGCCCTTTTTTTAATCTTTTTCGGTTTGTATTTGGTGGCATTGTGAAGCCCTTTCAAGCGTTGGGGCAGTTTTTGGGTCAGACACGAGCCTCTTCTACTTTGGCTTCGTCTTCCTCTACCTCGTCTCTCGCTGTCGGAGCCGACGAGGATGTCGAAATTGATCAAAGTGGGGTGACCCATCATTCCCCGACCCAAGTTCTCAAGAATTTCAACGAGATTCGGTTCCTTCGGATCGAGCTTCCGAGCGGGGAATTGGGTATTGATGATGGGGTTCTGCTGAAATGGCGAGCTGATTTTGGATCCACTTTGGATAATTGTGTGATTTTGGGTGCTTCTTCGGTGATTCAACCCGGTTCGATCAAGCCTTCGACTGCTCAAGATAATAATACTGATATTGGGTTCTGTATTGGCAATGGTGTTGCTAATGATGACAATGGAAGTATACCCGAATCCTTTTACACAAATGGGGGTTTAAAATTGAGGGTCGTATGGACGATTAGCTCGATTATTGCTGCTTCGGCGAGGCACTATTTGTTGCAACCAATAATAGCTGATCACAAGACTTTGGATAGTTTGGTTCTAACTGATGCGGATGGACAAGGGGTGTTGTGTATGAACAGAGATCAGCTTGAGGAGTTGAGGGTCAAGCCTTTGTCGGCTTCTTCGGCTTCTAAGAGAACCCTTGTACCGGCTCTGAACATGAGGCTTTGGTATGCCACACACTTAGAATTGCCCAATGGATTGATATTGAAAGGTGCTACATTGGTCGCTATCCGGCCGAGTGAGCAGTCTGCAGCAAAGGAGGTTTCTGATTGCTCTTGGGCTTCGACTGCTTTTGAAGAACCATATAGGACTGCTGCAAAGATGTTAGTGAAGAGGAGAACGTACTGCCTTGAAATGAACTCTTTCTGAAAGGGAAATTAGTAATTCGAGGTAAAATTTTAATGCATATAAACATTGTCCTTGTCTTTGATTCTTGCTAGATAACTAGATGAATTGATTTAGATCTTTGTTATAAGTCTTTGAACAACTGAAATTCTTGTGTTCCATGTCTCATTTGGATTCTTTCTTGGGTGAGATGAACCTTAGGGATAGAGAGATATGGAAATGATCACTATTATTGCATATTTTCATTCAGTTTATAATGGGACAATAATCACTGGTCAATCATGTGAGTGAGTGGGTCTTTTTGAACTGAACTACGCCTCATTTTATACTGGTCCTTTTTTATATCCATGACTATCTTAGTCAATTGATGTGCATCTCGACTATTCTCACAAGATAAGTTGTCCAACTCTACAATATTTAATTGTCAAGAAAATCCGTAGGAAATTAATTCCTAGGTAGGTGGCCTTGGCCACAATGAATTGAATTCATAACCTCTTAGATTGGGTTTTATACTGGTTTTCAGAGGCAGCTTGTTATAGAAATTTTTAGAATTAAGTTCAAGGGTATATAATATAATCTAGGTTATCTGATTCAAAGTGTGTTTGCAAAGTTTTTTTTTCTCTTCTAGTCATTTGGGATGCTTTCAAGTCGTTTACTGTTCTTGTTTTGTAACTATATCAGAAGTTTGGTTTTCAGGTATAGAAGAATAAACCATGCAAAGGGCAGAAGAAATTACATACCTTTAGAAAATGATAATCAGGAAGTTCTTACTGGTTTGCAGCTTGAGATAATTGGATGACAATGGACCAACTTTTGACTAGAATGGAAAGAAAGAAAACGCATTCGTTGTTGGCATAATAATACAAACGGTCGACCGTTTTTGGTAAAAGGCGATGGTTGAAAATGCATCTGCTGGTTGTTTTTGTTACAGGCATTTGCTATTTGGAGTGCAGACAAACAGCTAGAATGATGTTATAAAAGCTTTGAGTTTGTAGTCCCTTTTAACTTCTCTGTCAATCCTGTATATGTGAATACTGTAGGTAAGACTTCATTATGATCCCATGTCATATAGTTTGAAGTTTATAAATGTAAGCCTTTTTAAAATCTAGTTGAATAAATTTCTTTGTGGCTGGAAGCTGTTTACTCA

mRNA sequence

GGAAAAGAAAAAGGCGAAAAAAATGCAAAGAATCAGAGACACAGCTTTTTCCTCAGTTTTCGCCATTTTTCAGCTTTTTCTGTTCTTCTCTTCCGCTCATTTTCTCTGTAAAAACCTGTGAGATCTATGAAATCTCCTCTCTTATTTTCTCATCCTTTTCTTATCCAGTCTTCCAATTTCCTTTCCCAATTCAAAATCTTATGCCTTTAACCCTAATTCTCAGATCCCTTCAGTCCAGTTCTTGATTCCCTGCAAATCCCATTTCGGTTTTACGCTTCCCCTTTCGATTTCAGCCCTGACCCATCTTCCCTTTTCCTCAATTTTCCCCTTTTCTGTGTGATAATGGCGTCTTTGCGCCCAGATCTGACATCCAAGATCTACCCAGAACCTGATTCTTTCTGTATCGACCACTTTGATCGCCTTCCGGATTCCCTTCTTCTCCTTATCTTCAACCAGATCGGCGACGTCAAGGCTCTCGGCCGATGCTGCGTTGTTTCTCGAAGATTCCACTGCCTTGTCCCTCAAGTCGACAACGTTCTTGTTCGTGTGGATTGTGTTATTTCTGATGACGATTCGTCTTCTTCCTCCTCCGCCTCTGGTAAATCTCGTGGCCCTTTTTTTAATCTTTTTCGGTTTGTATTTGGTGGCATTGTGAAGCCCTTTCAAGCGTTGGGGCAGTTTTTGGGTCAGACACGAGCCTCTTCTACTTTGGCTTCGTCTTCCTCTACCTCGTCTCTCGCTGTCGGAGCCGACGAGGATGTCGAAATTGATCAAAGTGGGGTGACCCATCATTCCCCGACCCAAGTTCTCAAGAATTTCAACGAGATTCGGTTCCTTCGGATCGAGCTTCCGAGCGGGGAATTGGGTATTGATGATGGGGTTCTGCTGAAATGGCGAGCTGATTTTGGATCCACTTTGGATAATTGTGTGATTTTGGGTGCTTCTTCGGTGATTCAACCCGGTTCGATCAAGCCTTCGACTGCTCAAGATAATAATACTGATATTGGGTTCTGTATTGGCAATGGTGTTGCTAATGATGACAATGGAAGTATACCCGAATCCTTTTACACAAATGGGGGTTTAAAATTGAGGGTCGTATGGACGATTAGCTCGATTATTGCTGCTTCGGCGAGGCACTATTTGTTGCAACCAATAATAGCTGATCACAAGACTTTGGATAGTTTGGTTCTAACTGATGCGGATGGACAAGGGGTGTTGTGTATGAACAGAGATCAGCTTGAGGAGTTGAGGGTCAAGCCTTTGTCGGCTTCTTCGGCTTCTAAGAGAACCCTTGTACCGGCTCTGAACATGAGGCTTTGGTATGCCACACACTTAGAATTGCCCAATGGATTGATATTGAAAGGTGCTACATTGGTCGCTATCCGGCCGAGTGAGCAGTCTGCAGCAAAGGAGGTTTCTGATTGCTCTTGGGCTTCGACTGCTTTTGAAGAACCATATAGGACTGCTGCAAAGATGTTAGTGAAGAGGAGAACGTACTGCCTTGAAATGAACTCTTTCTGAAAGGGAAATTAGTAATTCGAGGTATAGAAGAATAAACCATGCAAAGGGCAGAAGAAATTACATACCTTTAGAAAATGATAATCAGGAAGTTCTTACTGGTTTGCAGCTTGAGATAATTGGATGACAATGGACCAACTTTTGACTAGAATGGAAAGAAAGAAAACGCATTCGTTGTTGGCATAATAATACAAACGGTCGACCGTTTTTGGTAAAAGGCGATGGTTGAAAATGCATCTGCTGGTTGTTTTTGTTACAGGCATTTGCTATTTGGAGTGCAGACAAACAGCTAGAATGATGTTATAAAAGCTTTGAGTTTGTAGTCCCTTTTAACTTCTCTGTCAATCCTGTATATGTGAATACTGTAGGTAAGACTTCATTATGATCCCATGTCATATAGTTTGAAGTTTATAAATGTAAGCCTTTTTAAAATCTAGTTGAATAAATTTCTTTGTGGCTGGAAGCTGTTTACTCA

Coding sequence (CDS)

ATGGCGTCTTTGCGCCCAGATCTGACATCCAAGATCTACCCAGAACCTGATTCTTTCTGTATCGACCACTTTGATCGCCTTCCGGATTCCCTTCTTCTCCTTATCTTCAACCAGATCGGCGACGTCAAGGCTCTCGGCCGATGCTGCGTTGTTTCTCGAAGATTCCACTGCCTTGTCCCTCAAGTCGACAACGTTCTTGTTCGTGTGGATTGTGTTATTTCTGATGACGATTCGTCTTCTTCCTCCTCCGCCTCTGGTAAATCTCGTGGCCCTTTTTTTAATCTTTTTCGGTTTGTATTTGGTGGCATTGTGAAGCCCTTTCAAGCGTTGGGGCAGTTTTTGGGTCAGACACGAGCCTCTTCTACTTTGGCTTCGTCTTCCTCTACCTCGTCTCTCGCTGTCGGAGCCGACGAGGATGTCGAAATTGATCAAAGTGGGGTGACCCATCATTCCCCGACCCAAGTTCTCAAGAATTTCAACGAGATTCGGTTCCTTCGGATCGAGCTTCCGAGCGGGGAATTGGGTATTGATGATGGGGTTCTGCTGAAATGGCGAGCTGATTTTGGATCCACTTTGGATAATTGTGTGATTTTGGGTGCTTCTTCGGTGATTCAACCCGGTTCGATCAAGCCTTCGACTGCTCAAGATAATAATACTGATATTGGGTTCTGTATTGGCAATGGTGTTGCTAATGATGACAATGGAAGTATACCCGAATCCTTTTACACAAATGGGGGTTTAAAATTGAGGGTCGTATGGACGATTAGCTCGATTATTGCTGCTTCGGCGAGGCACTATTTGTTGCAACCAATAATAGCTGATCACAAGACTTTGGATAGTTTGGTTCTAACTGATGCGGATGGACAAGGGGTGTTGTGTATGAACAGAGATCAGCTTGAGGAGTTGAGGGTCAAGCCTTTGTCGGCTTCTTCGGCTTCTAAGAGAACCCTTGTACCGGCTCTGAACATGAGGCTTTGGTATGCCACACACTTAGAATTGCCCAATGGATTGATATTGAAAGGTGCTACATTGGTCGCTATCCGGCCGAGTGAGCAGTCTGCAGCAAAGGAGGTTTCTGATTGCTCTTGGGCTTCGACTGCTTTTGAAGAACCATATAGGACTGCTGCAAAGATGTTAGTGAAGAGGAGAACGTACTGCCTTGAAATGAACTCTTTCTGA

Protein sequence

MASLRPDLTSKIYPEPDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF

Homology

[Close]

BLAST of Sed0001998 vs. NCBI nr
Match: XP_004137366.1 (F-box protein At5g46170 [Cucumis sativus] >XP_011649352.1 F-box protein At5g46170 [Cucumis sativus] >KGN63909.1 hypothetical protein Csa_013250 [Cucumis sativus])

HSP 1 Score: 722.2 bits (1863), Expect = 2.3e-204
Identity = 369/406 (90.89%), Postives = 381/406 (93.84%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF-------------CIDHFDRLPDSLLLLIFNQIGDVKALGR 60
           M+SLR DLTSKIYPEPDS              CIDHFDRLPDSLLLLIFN+IGDVKALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSSSISSTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 61  CCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPF 120
           CCVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP 
Sbjct: 61  CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 121 QALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           QALGQFLGQTRASSTLASSSSTSSLAVG DED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 QALGQFLGQTRASSTLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGN 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPS AQDN TD GFC+GN
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIAQDNGTDGGFCMGN 240

Query: 241 GVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDAD 300
           G A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDAD
Sbjct: 241 GGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDAD 300

Query: 301 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360
           GQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI
Sbjct: 301 GQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360

Query: 361 RPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           RPSEQSAA K+VSDC WASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 RPSEQSAAKKDVSDCFWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406

[Close]

BLAST of Sed0001998 vs. NCBI nr
Match: XP_008444512.1 (PREDICTED: F-box protein At5g46170-like [Cucumis melo] >XP_008444520.1 PREDICTED: F-box protein At5g46170-like [Cucumis melo] >KAA0054000.1 F-box protein [Cucumis melo var. makuwa] >TYK20685.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 721.1 bits (1860), Expect = 5.2e-204
Identity = 368/406 (90.64%), Postives = 380/406 (93.60%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF-------------CIDHFDRLPDSLLLLIFNQIGDVKALGR 60
           M+SLR DLTSKIYPEPDS              CIDHFDRLPDSLLLLIFN+IGDVKALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSASISTTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 61  CCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPF 120
           CCVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP 
Sbjct: 61  CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 121 QALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           QALGQFLGQTRASS+LASSSSTSSLAVG DED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 QALGQFLGQTRASSSLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGN 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPS  QDN TD GFCIGN
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIGQDNGTDGGFCIGN 240

Query: 241 GVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDAD 300
           G A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDAD
Sbjct: 241 GGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDAD 300

Query: 301 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360
           GQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI
Sbjct: 301 GQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360

Query: 361 RPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           RPSEQSA  K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 RPSEQSAVKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406

[Close]

BLAST of Sed0001998 vs. NCBI nr
Match: XP_038895389.1 (F-box protein At5g46170-like [Benincasa hispida])

HSP 1 Score: 710.3 bits (1832), Expect = 9.2e-201
Identity = 368/414 (88.89%), Postives = 381/414 (92.03%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF------------CIDHFDRLPDSLLLLIFNQIGDVKALGRC 60
           M+SLR DLTSKIYPEPDS             CIDHFDRLPDSLLLLIFN+IGDVKALGRC
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSLNSASISTSCCIDHFDRLPDSLLLLIFNKIGDVKALGRC 60

Query: 61  CVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQ 120
           CVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP Q
Sbjct: 61  CVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPLQ 120

Query: 121 ALGQFLGQTRASSTLA-SSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           ALGQFLGQTR SS+LA SSSSTSSLAVG +ED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 ALGQFLGQTRPSSSLASSSSSTSSLAVGTEEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDI------ 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVI PGSIKPS AQDN TDI      
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIHPGSIKPSIAQDNGTDIAQDNGT 240

Query: 241 --GFCIGNGVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLD 300
             GFCIGNG A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLD
Sbjct: 241 DGGFCIGNGGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLD 300

Query: 301 SLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLIL 360
           SLVLTDADGQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLIL
Sbjct: 301 SLVLTDADGQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLIL 360

Query: 361 KGATLVAIRPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           KGATLVAIRPSEQSAA K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 KGATLVAIRPSEQSAAKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 414

[Close]

BLAST of Sed0001998 vs. NCBI nr
Match: XP_022140089.1 (F-box protein At5g46170-like [Momordica charantia])

HSP 1 Score: 704.1 bits (1816), Expect = 6.6e-199
Identity = 361/399 (90.48%), Postives = 374/399 (93.73%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF------CIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRR 60
           M+SLR DLTSKIYPEPDS        IDHFDRLPDSLLLLIFN+IGDVKALGRCCVVSRR
Sbjct: 1   MSSLRLDLTSKIYPEPDSIFSFNSASIDHFDRLPDSLLLLIFNKIGDVKALGRCCVVSRR 60

Query: 61  FHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQALGQFL 120
           FHCLVPQV+NV+VRVDCVISDDDSSSSSS+SGKSRGPFFN+FRFVFGGIVKP QALGQFL
Sbjct: 61  FHCLVPQVENVVVRVDCVISDDDSSSSSSSSGKSRGPFFNIFRFVFGGIVKPLQALGQFL 120

Query: 121 GQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGEL 180
           GQTR SS+LASSSS SSLAVG++ED EIDQ GVTHHSPTQVLKNFNEIRFLRIELPSGEL
Sbjct: 121 GQTRVSSSLASSSSPSSLAVGSEEDGEIDQGGVTHHSPTQVLKNFNEIRFLRIELPSGEL 180

Query: 181 GIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDN 240
           GIDDGVLLKWRADFGSTLDNCVILGASSV+  GSIKPS AQDN  D GFCI NG A DDN
Sbjct: 181 GIDDGVLLKWRADFGSTLDNCVILGASSVMHSGSIKPSLAQDNGAD-GFCIANGAAVDDN 240

Query: 241 GSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM 300
           GSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM
Sbjct: 241 GSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM 300

Query: 301 NRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA 360
           N+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA
Sbjct: 301 NKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA 360

Query: 361 A-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
             K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 VKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 398

[Close]

BLAST of Sed0001998 vs. NCBI nr
Match: KAG7019504.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 703.7 bits (1815), Expect = 8.6e-199
Identity = 358/405 (88.40%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDS------------FCIDHFDRLPDSLLLLIFNQIGDVKALGRC 60
           M+SLR DLTSKIYPEPDS             CIDHFDRLPDSLLLLIFN+IGDVKALGRC
Sbjct: 1   MSSLRLDLTSKIYPEPDSPFSVNSASISTPSCIDHFDRLPDSLLLLIFNKIGDVKALGRC 60

Query: 61  CVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQ 120
           CVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP Q
Sbjct: 61  CVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPLQ 120

Query: 121 ALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIE 180
           AL QFLGQTRASS+L SSSST+SLAVG +ED EIDQ GVTHHSPTQVLKNFNEIR LRIE
Sbjct: 121 ALSQFLGQTRASSSLVSSSSTTSLAVGTEEDGEIDQGGVTHHSPTQVLKNFNEIRLLRIE 180

Query: 181 LPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNG 240
           LPSGELGIDDGVLL+WRADFGSTLDNCVILGASSVI PGS KPS  QDN TD GFCIGNG
Sbjct: 181 LPSGELGIDDGVLLRWRADFGSTLDNCVILGASSVIHPGSFKPSIVQDNGTDGGFCIGNG 240

Query: 241 VANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADG 300
             +DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDADG
Sbjct: 241 GVSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDADG 300

Query: 301 QGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR 360
           QGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR
Sbjct: 301 QGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR 360

Query: 361 PSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           PSEQSA  K+V DCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 PSEQSAVKKDVPDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 405

[Close]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot
Match: Q9FNK5 (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 7.9e-163
Identity = 305/394 (77.41%), Postives = 335/394 (85.03%), Query Frame = 0


Query: 5   RPDLTSKIYPE-PDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVD 64
           R D  S+I+PE P +  IDHFD LPDS+LLL+FN+IGDVKALGRCCVVSRRFH LVPQVD
Sbjct: 7   RSDPPSRIHPEPPQTLEIDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVD 66

Query: 65  NVLVRVDCVISDDDSSSSS---SASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRAS 124
           NV+VRVDCVISDDDSSS S   S SG S G F  +FR V GGIVKP QALGQFLG  R+S
Sbjct: 67  NVVVRVDCVISDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSS 126

Query: 125 STL-ASSSSTSSLAVGADED-VEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDD 184
           S+   S SS+SSL++  D+D  EI+Q GVTHHSPTQVLKNF+EIR+LRIELPSGELGIDD
Sbjct: 127 SSCGGSGSSSSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDD 186

Query: 185 GVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIP 244
           GVLLKWRA+FGSTLDNCVILGASSVI P  ++ S A D  T +      G  +DDNGSIP
Sbjct: 187 GVLLKWRAEFGSTLDNCVILGASSVIPPNPMRVSQACDTTTVVE---APGSGSDDNGSIP 246

Query: 245 ESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQ 304
           ESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIA+HKTLDSLVLTD+DGQGVLCMNRDQ
Sbjct: 247 ESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQ 306

Query: 305 LEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEV 364
           LEELRVKPL+ASSASKRTLVPALNMRLWYA  LELP+G +LKGATLVAIRPSE  + KEV
Sbjct: 307 LEELRVKPLAASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSE--SKKEV 366

Query: 365 SDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           SD SW S+AFEEPY TAAKMLVKRRTYCLEMNSF
Sbjct: 367 SDISWVSSAFEEPYETAAKMLVKRRTYCLEMNSF 395

[Close]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot
Match: O49508 (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 7.7e-150
Identity = 285/388 (73.45%), Postives = 314/388 (80.93%), Query Frame = 0


Query: 8   LTSKIYPEPDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLV 67
           L S+I+PEP    IDHFD LPDS+LLLIFN IGDVKALGRC VVS+RFH L+PQV+NV V
Sbjct: 11  LLSRIHPEPQE--IDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFV 70

Query: 68  RVDCVISDDDSSSSSS---ASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRASSTLA 127
           RVDCVISDDDSSS  S    S  +  PF  +FR VF    KP QALGQFL ++  SS+L 
Sbjct: 71  RVDCVISDDDSSSLLSDKPRSASAASPFSAIFRLVF----KPLQALGQFLKRS-GSSSLP 130

Query: 128 SSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKW 187
           S SS SSL +   +D EI+Q GVTHHSPTQVLKNF+EI+FL+IELPSGELGIDDGVLLKW
Sbjct: 131 SGSSPSSLLISGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKW 190

Query: 188 RADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTN 247
           RA+FGSTL+NCVILGASSVI P +   + A               A +DNGSIPESFYTN
Sbjct: 191 RAEFGSTLENCVILGASSVIPPTNSDKTEASSAPV---------AAVEDNGSIPESFYTN 250

Query: 248 GGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEELRV 307
           GGLKLRVVWTISS+IAASARHYLLQPIIA+HKTLDSLVLTD DGQGVLCMNRDQLEELRV
Sbjct: 251 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRV 310

Query: 308 KPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEVSDCSWA 367
           KPLSASSASKRTLVPALNMRLWYA  LELP+G +LKGATLVAIRPSE  + KEV D SW 
Sbjct: 311 KPLSASSASKRTLVPALNMRLWYAPSLELPDGTVLKGATLVAIRPSE--SKKEVCDVSWV 370

Query: 368 STAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           S+AF+EPY  AAKMLVKRRTYCLEMNSF
Sbjct: 371 SSAFDEPYGVAAKMLVKRRTYCLEMNSF 380

[Close]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot
Match: Q9C534 (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.3e-144
Identity = 275/402 (68.41%), Postives = 310/402 (77.11%), Query Frame = 0


Query: 4   LRPDLTSKIYPEPDSF-CIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQV 63
           LR D  S+I+PEP S    DHFD LPDSLLLLIF+++ DVK LGRCC+VSRRFH LVP V
Sbjct: 5   LRSDPVSRIHPEPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFV 64

Query: 64  DNVLVRVDCVISDDDSSSSS------------SASGKSRGPFFNLFRFVFGGIVKPFQAL 123
           +NVLVRVDCVISDDDSSSS             S +G + G F  LFR VF  I KPFQ L
Sbjct: 65  ENVLVRVDCVISDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQML 124

Query: 124 GQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELP 183
           GQ LG  R+SS+  +S S  +           D+ GVTHHSPTQVLKNF EIRFL+IELP
Sbjct: 125 GQILGPKRSSSSFDASFSAIN-----------DEIGVTHHSPTQVLKNFGEIRFLKIELP 184

Query: 184 SGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVA 243
           +GELGI+DG+LLKWRADFGSTLDNC+ILGASSVIQ  S+K     +N+ D          
Sbjct: 185 TGELGIEDGILLKWRADFGSTLDNCMILGASSVIQSNSVK---NHENSVD---------- 244

Query: 244 NDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQG 303
            +DNG+IPESFYTNGGLKLRVVWTISS+IAASARHYLLQPII +HK+LD LVL+DADGQG
Sbjct: 245 -EDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQG 304

Query: 304 VLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPS 363
           VLCMNR+QLEELRV PLSASSASKRTLVPALNMRLWYA  L+LP+G +LKGATLVAIRPS
Sbjct: 305 VLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAPELDLPDGTVLKGATLVAIRPS 364

Query: 364 EQSAAKEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           E  + KEV D SW S AFEEP+ T AKML+KRRTYCLEMNSF
Sbjct: 365 E--SKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYCLEMNSF 379

[Close]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot
Match: Q9LM18 (F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-45
Identity = 125/380 (32.89%), Postives = 199/380 (52.37%), Query Frame = 0


Query: 21  IDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSS 80
           +D FD LPD +++ I N++GDVK L RC  +S+RF+ LVPQ +++ +R+D  +SD    +
Sbjct: 1   MDVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVT 60

Query: 81  SSSASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRASSTLASSSSTSSLAVGADEDV 140
           S             +FR +F G+V       + +  T  S +L                 
Sbjct: 61  S-------------IFRSLFNGLVSLLSKPAKPITITTLSPSL----------------- 120

Query: 141 EIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVILGA 200
                      P ++L  F+ IR L +ELP G++ ++ G  +KW+A+FG TL +CVI+  
Sbjct: 121 -----------PFKILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAF 180

Query: 201 SSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTNGGLKLRVVWTISSIIA 260
            S    G++    A +  +D  F                      GLK RVVWTIS+++A
Sbjct: 181 RSA---GTVSSPVAVEGESDAEFVT--------------------GLKTRVVWTISALMA 240

Query: 261 ASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEEL-----RVKPLSASSASKR 320
           AS+RHYL++ ++ +H+ ++SLV+ D + +G + MN + L+EL     RV+       +KR
Sbjct: 241 ASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNKR 300

Query: 321 TLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEV-SDCSWASTAF--EEPY 380
           ++VP++ M + +A  L+L +G+ L+ ATLV +RPS   A  EV  D   A+ AF  +  Y
Sbjct: 301 SVVPSVRMSMRHAPSLKLKSGICLESATLVIVRPS--GADFEVGDDAELATEAFVGDCMY 314

Query: 381 RTAAKMLVKRRTYCLEMNSF 393
             A   L+K +   LEMNSF
Sbjct: 361 GEAVVALLKCKKNALEMNSF 314

[Close]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot
Match: Q9C9S2 (F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.7e-44
Identity = 119/385 (30.91%), Postives = 197/385 (51.17%), Query Frame = 0


Query: 21  IDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSS 80
           +D FD +PD +++ I N++GDVK L RC  VS+RF+ L  Q +++L+++D ++   +S S
Sbjct: 1   MDAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDS 60

Query: 81  SSSASGKSRGPFFNLFRFVF---GGIVKPFQALGQFLGQTRASSTLASSSSTSSLAVGAD 140
              +      P  + FR +F    G++ P      F     +   L  S  T        
Sbjct: 61  EIDS------PIASFFRSLFKSIHGLLPPI-----FSKPANSDEILTRSPKT-------- 120

Query: 141 EDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFGSTLDNCVI 200
                         P Q+L  F  IR L +EL  G++ ++ G  +KW+A+FG TL +CVI
Sbjct: 121 --------------PAQILSGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVI 180

Query: 201 LGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTNGGLKLRVVWTISS 260
           +         + + +T   +       + +GV   D+  +        GLK RVVWTIS+
Sbjct: 181 V---------AFRSATVNTSAATEAAAVVDGVVESDSEFV-------CGLKTRVVWTISA 240

Query: 261 IIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPL-----SASSA 320
           ++AAS RHYL++ ++ DHK ++ L++ D+DG+G + M+   ++E R   +      +   
Sbjct: 241 LMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERV 300

Query: 321 SKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEVSDCSWASTAF---- 380
            +RT+VP++ M + +A  L L +G+ L+ ATLV +RP+    A + +D    + AF    
Sbjct: 301 GERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPT--GVASDDNDVELVTEAFAGDG 334

Query: 381 -EEPYRTAAKMLVKRRTYCLEMNSF 393
            +  Y  A   L+KRR   LEMNSF
Sbjct: 361 DDCMYGEAVTALLKRRRNVLEMNSF 334

[Close]

BLAST of Sed0001998 vs. ExPASy TrEMBL
Match: A0A0A0LSD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025900 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.1e-204
Identity = 369/406 (90.89%), Postives = 381/406 (93.84%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF-------------CIDHFDRLPDSLLLLIFNQIGDVKALGR 60
           M+SLR DLTSKIYPEPDS              CIDHFDRLPDSLLLLIFN+IGDVKALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSSSISSTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 61  CCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPF 120
           CCVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP 
Sbjct: 61  CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 121 QALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           QALGQFLGQTRASSTLASSSSTSSLAVG DED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 QALGQFLGQTRASSTLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGN 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPS AQDN TD GFC+GN
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIAQDNGTDGGFCMGN 240

Query: 241 GVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDAD 300
           G A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDAD
Sbjct: 241 GGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDAD 300

Query: 301 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360
           GQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI
Sbjct: 301 GQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360

Query: 361 RPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           RPSEQSAA K+VSDC WASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 RPSEQSAAKKDVSDCFWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406

[Close]

BLAST of Sed0001998 vs. ExPASy TrEMBL
Match: A0A1S3BB83 (F-box protein At5g46170-like OS=Cucumis melo OX=3656 GN=LOC103487806 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 368/406 (90.64%), Postives = 380/406 (93.60%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF-------------CIDHFDRLPDSLLLLIFNQIGDVKALGR 60
           M+SLR DLTSKIYPEPDS              CIDHFDRLPDSLLLLIFN+IGDVKALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSASISTTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 61  CCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPF 120
           CCVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP 
Sbjct: 61  CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 121 QALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           QALGQFLGQTRASS+LASSSSTSSLAVG DED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 QALGQFLGQTRASSSLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGN 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPS  QDN TD GFCIGN
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIGQDNGTDGGFCIGN 240

Query: 241 GVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDAD 300
           G A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDAD
Sbjct: 241 GGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDAD 300

Query: 301 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360
           GQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI
Sbjct: 301 GQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360

Query: 361 RPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           RPSEQSA  K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 RPSEQSAVKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406

[Close]

BLAST of Sed0001998 vs. ExPASy TrEMBL
Match: A0A5D3DAY7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00740 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 368/406 (90.64%), Postives = 380/406 (93.60%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF-------------CIDHFDRLPDSLLLLIFNQIGDVKALGR 60
           M+SLR DLTSKIYPEPDS              CIDHFDRLPDSLLLLIFN+IGDVKALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSASISTTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 61  CCVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPF 120
           CCVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP 
Sbjct: 61  CCVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPL 120

Query: 121 QALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRI 180
           QALGQFLGQTRASS+LASSSSTSSLAVG DED EIDQ GVTHHSPTQVLKNFNEIRFLRI
Sbjct: 121 QALGQFLGQTRASSSLASSSSTSSLAVGTDEDGEIDQGGVTHHSPTQVLKNFNEIRFLRI 180

Query: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGN 240
           ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPS  QDN TD GFCIGN
Sbjct: 181 ELPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSIGQDNGTDGGFCIGN 240

Query: 241 GVANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDAD 300
           G A+DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDAD
Sbjct: 241 GGASDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDAD 300

Query: 301 GQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360
           GQGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI
Sbjct: 301 GQGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAI 360

Query: 361 RPSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           RPSEQSA  K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 RPSEQSAVKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 406

[Close]

BLAST of Sed0001998 vs. ExPASy TrEMBL
Match: A0A6J1CER8 (F-box protein At5g46170-like OS=Momordica charantia OX=3673 GN=LOC111010828 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 3.2e-199
Identity = 361/399 (90.48%), Postives = 374/399 (93.73%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPDSF------CIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRR 60
           M+SLR DLTSKIYPEPDS        IDHFDRLPDSLLLLIFN+IGDVKALGRCCVVSRR
Sbjct: 1   MSSLRLDLTSKIYPEPDSIFSFNSASIDHFDRLPDSLLLLIFNKIGDVKALGRCCVVSRR 60

Query: 61  FHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQALGQFL 120
           FHCLVPQV+NV+VRVDCVISDDDSSSSSS+SGKSRGPFFN+FRFVFGGIVKP QALGQFL
Sbjct: 61  FHCLVPQVENVVVRVDCVISDDDSSSSSSSSGKSRGPFFNIFRFVFGGIVKPLQALGQFL 120

Query: 121 GQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGEL 180
           GQTR SS+LASSSS SSLAVG++ED EIDQ GVTHHSPTQVLKNFNEIRFLRIELPSGEL
Sbjct: 121 GQTRVSSSLASSSSPSSLAVGSEEDGEIDQGGVTHHSPTQVLKNFNEIRFLRIELPSGEL 180

Query: 181 GIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDN 240
           GIDDGVLLKWRADFGSTLDNCVILGASSV+  GSIKPS AQDN  D GFCI NG A DDN
Sbjct: 181 GIDDGVLLKWRADFGSTLDNCVILGASSVMHSGSIKPSLAQDNGAD-GFCIANGAAVDDN 240

Query: 241 GSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM 300
           GSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM
Sbjct: 241 GSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCM 300

Query: 301 NRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA 360
           N+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA
Sbjct: 301 NKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSA 360

Query: 361 A-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
             K+VSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 VKKDVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 398

[Close]

BLAST of Sed0001998 vs. ExPASy TrEMBL
Match: A0A6J1ENW9 (F-box protein At5g46170-like OS=Cucurbita moschata OX=3662 GN=LOC111434258 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 4.2e-199
Identity = 358/405 (88.40%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 1   MASLRPDLTSKIYPEPD------------SFCIDHFDRLPDSLLLLIFNQIGDVKALGRC 60
           M+SLR DLTSKIYPEPD            S CIDHFDRLPDSLLLLIFN+IGDVKALGRC
Sbjct: 1   MSSLRLDLTSKIYPEPDSPFSVNSASISTSSCIDHFDRLPDSLLLLIFNKIGDVKALGRC 60

Query: 61  CVVSRRFHCLVPQVDNVLVRVDCVISDDDSSSSSSASGKSRGPFFNLFRFVFGGIVKPFQ 120
           CVVSRRFHCLVPQV+NV+VRVDCVISDD+SSSSSS+SGKSRGPFFN+FRFVFGGIVKP Q
Sbjct: 61  CVVSRRFHCLVPQVENVVVRVDCVISDDESSSSSSSSGKSRGPFFNIFRFVFGGIVKPLQ 120

Query: 121 ALGQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIE 180
           AL QFLGQTRASS+L SSSST+SLAVG +ED EIDQ GVTHHSPTQVLKNFNEIR LRIE
Sbjct: 121 ALSQFLGQTRASSSLVSSSSTTSLAVGTEEDGEIDQGGVTHHSPTQVLKNFNEIRLLRIE 180

Query: 181 LPSGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNG 240
           LPSGELGIDDGVLL+WRADFGSTLDNCVILGASSVI PGS KPS  QDN TD GFCIGNG
Sbjct: 181 LPSGELGIDDGVLLRWRADFGSTLDNCVILGASSVIHPGSFKPSIVQDNGTDGGFCIGNG 240

Query: 241 VANDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADG 300
             +DDNGSIPESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIADHKTLDSLVLTDADG
Sbjct: 241 GVSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHKTLDSLVLTDADG 300

Query: 301 QGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR 360
           QGVLCMN+DQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR
Sbjct: 301 QGVLCMNKDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIR 360

Query: 361 PSEQSAA-KEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           PSEQSA  K+V DCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF
Sbjct: 361 PSEQSAVKKDVPDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 405

[Close]

BLAST of Sed0001998 vs. TAIR 10
Match: AT5G46170.1 (F-box family protein )

HSP 1 Score: 574.7 bits (1480), Expect = 5.6e-164
Identity = 305/394 (77.41%), Postives = 335/394 (85.03%), Query Frame = 0


Query: 5   RPDLTSKIYPE-PDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVD 64
           R D  S+I+PE P +  IDHFD LPDS+LLL+FN+IGDVKALGRCCVVSRRFH LVPQVD
Sbjct: 7   RSDPPSRIHPEPPQTLEIDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVD 66

Query: 65  NVLVRVDCVISDDDSSSSS---SASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRAS 124
           NV+VRVDCVISDDDSSS S   S SG S G F  +FR V GGIVKP QALGQFLG  R+S
Sbjct: 67  NVVVRVDCVISDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSS 126

Query: 125 STL-ASSSSTSSLAVGADED-VEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDD 184
           S+   S SS+SSL++  D+D  EI+Q GVTHHSPTQVLKNF+EIR+LRIELPSGELGIDD
Sbjct: 127 SSCGGSGSSSSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDD 186

Query: 185 GVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIP 244
           GVLLKWRA+FGSTLDNCVILGASSVI P  ++ S A D  T +      G  +DDNGSIP
Sbjct: 187 GVLLKWRAEFGSTLDNCVILGASSVIPPNPMRVSQACDTTTVVE---APGSGSDDNGSIP 246

Query: 245 ESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQ 304
           ESFYTNGGLKLRVVWTISS+IAASARHYLLQPIIA+HKTLDSLVLTD+DGQGVLCMNRDQ
Sbjct: 247 ESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQ 306

Query: 305 LEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEV 364
           LEELRVKPL+ASSASKRTLVPALNMRLWYA  LELP+G +LKGATLVAIRPSE  + KEV
Sbjct: 307 LEELRVKPLAASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSE--SKKEV 366

Query: 365 SDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           SD SW S+AFEEPY TAAKMLVKRRTYCLEMNSF
Sbjct: 367 SDISWVSSAFEEPYETAAKMLVKRRTYCLEMNSF 395

[Close]

BLAST of Sed0001998 vs. TAIR 10
Match: AT4G18380.1 (F-box family protein )

HSP 1 Score: 531.6 bits (1368), Expect = 5.5e-151
Identity = 285/388 (73.45%), Postives = 314/388 (80.93%), Query Frame = 0


Query: 8   LTSKIYPEPDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLV 67
           L S+I+PEP    IDHFD LPDS+LLLIFN IGDVKALGRC VVS+RFH L+PQV+NV V
Sbjct: 11  LLSRIHPEPQE--IDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFV 70

Query: 68  RVDCVISDDDSSSSSS---ASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRASSTLA 127
           RVDCVISDDDSSS  S    S  +  PF  +FR VF    KP QALGQFL ++  SS+L 
Sbjct: 71  RVDCVISDDDSSSLLSDKPRSASAASPFSAIFRLVF----KPLQALGQFLKRS-GSSSLP 130

Query: 128 SSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKW 187
           S SS SSL +   +D EI+Q GVTHHSPTQVLKNF+EI+FL+IELPSGELGIDDGVLLKW
Sbjct: 131 SGSSPSSLLISGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKW 190

Query: 188 RADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTN 247
           RA+FGSTL+NCVILGASSVI P +   + A               A +DNGSIPESFYTN
Sbjct: 191 RAEFGSTLENCVILGASSVIPPTNSDKTEASSAPV---------AAVEDNGSIPESFYTN 250

Query: 248 GGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEELRV 307
           GGLKLRVVWTISS+IAASARHYLLQPIIA+HKTLDSLVLTD DGQGVLCMNRDQLEELRV
Sbjct: 251 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRV 310

Query: 308 KPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEVSDCSWA 367
           KPLSASSASKRTLVPALNMRLWYA  LELP+G +LKGATLVAIRPSE  + KEV D SW 
Sbjct: 311 KPLSASSASKRTLVPALNMRLWYAPSLELPDGTVLKGATLVAIRPSE--SKKEVCDVSWV 370

Query: 368 STAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           S+AF+EPY  AAKMLVKRRTYCLEMNSF
Sbjct: 371 SSAFDEPYGVAAKMLVKRRTYCLEMNSF 380

[Close]

BLAST of Sed0001998 vs. TAIR 10
Match: AT4G18380.2 (F-box family protein )

HSP 1 Score: 531.6 bits (1368), Expect = 5.5e-151
Identity = 285/388 (73.45%), Postives = 314/388 (80.93%), Query Frame = 0


Query: 8   LTSKIYPEPDSFCIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQVDNVLV 67
           L S+I+PEP    IDHFD LPDS+LLLIFN IGDVKALGRC VVS+RFH L+PQV+NV V
Sbjct: 11  LLSRIHPEPQE--IDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFV 70

Query: 68  RVDCVISDDDSSSSSS---ASGKSRGPFFNLFRFVFGGIVKPFQALGQFLGQTRASSTLA 127
           RVDCVISDDDSSS  S    S  +  PF  +FR VF    KP QALGQFL ++  SS+L 
Sbjct: 71  RVDCVISDDDSSSLLSDKPRSASAASPFSAIFRLVF----KPLQALGQFLKRS-GSSSLP 130

Query: 128 SSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKW 187
           S SS SSL +   +D EI+Q GVTHHSPTQVLKNF+EI+FL+IELPSGELGIDDGVLLKW
Sbjct: 131 SGSSPSSLLISGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKW 190

Query: 188 RADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVANDDNGSIPESFYTN 247
           RA+FGSTL+NCVILGASSVI P +   + A               A +DNGSIPESFYTN
Sbjct: 191 RAEFGSTLENCVILGASSVIPPTNSDKTEASSAPV---------AAVEDNGSIPESFYTN 250

Query: 248 GGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQGVLCMNRDQLEELRV 307
           GGLKLRVVWTISS+IAASARHYLLQPIIA+HKTLDSLVLTD DGQGVLCMNRDQLEELRV
Sbjct: 251 GGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRV 310

Query: 308 KPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPSEQSAAKEVSDCSWA 367
           KPLSASSASKRTLVPALNMRLWYA  LELP+G +LKGATLVAIRPSE  + KEV D SW 
Sbjct: 311 KPLSASSASKRTLVPALNMRLWYAPSLELPDGTVLKGATLVAIRPSE--SKKEVCDVSWV 370

Query: 368 STAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           S+AF+EPY  AAKMLVKRRTYCLEMNSF
Sbjct: 371 SSAFDEPYGVAAKMLVKRRTYCLEMNSF 380

[Close]

BLAST of Sed0001998 vs. TAIR 10
Match: AT1G30200.2 (F-box family protein )

HSP 1 Score: 511.9 bits (1317), Expect = 4.5e-145
Identity = 275/402 (68.41%), Postives = 310/402 (77.11%), Query Frame = 0


Query: 4   LRPDLTSKIYPEPDSF-CIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQV 63
           LR D  S+I+PEP S    DHFD LPDSLLLLIF+++ DVK LGRCC+VSRRFH LVP V
Sbjct: 5   LRSDPVSRIHPEPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFV 64

Query: 64  DNVLVRVDCVISDDDSSSSS------------SASGKSRGPFFNLFRFVFGGIVKPFQAL 123
           +NVLVRVDCVISDDDSSSS             S +G + G F  LFR VF  I KPFQ L
Sbjct: 65  ENVLVRVDCVISDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQML 124

Query: 124 GQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELP 183
           GQ LG  R+SS+  +S S  +           D+ GVTHHSPTQVLKNF EIRFL+IELP
Sbjct: 125 GQILGPKRSSSSFDASFSAIN-----------DEIGVTHHSPTQVLKNFGEIRFLKIELP 184

Query: 184 SGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVA 243
           +GELGI+DG+LLKWRADFGSTLDNC+ILGASSVIQ  S+K     +N+ D          
Sbjct: 185 TGELGIEDGILLKWRADFGSTLDNCMILGASSVIQSNSVK---NHENSVD---------- 244

Query: 244 NDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQG 303
            +DNG+IPESFYTNGGLKLRVVWTISS+IAASARHYLLQPII +HK+LD LVL+DADGQG
Sbjct: 245 -EDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQG 304

Query: 304 VLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPS 363
           VLCMNR+QLEELRV PLSASSASKRTLVPALNMRLWYA  L+LP+G +LKGATLVAIRPS
Sbjct: 305 VLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAPELDLPDGTVLKGATLVAIRPS 364

Query: 364 EQSAAKEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           E  + KEV D SW S AFEEP+ T AKML+KRRTYCLEMNSF
Sbjct: 365 E--SKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYCLEMNSF 379

[Close]

BLAST of Sed0001998 vs. TAIR 10
Match: AT1G30200.1 (F-box family protein )

HSP 1 Score: 511.9 bits (1317), Expect = 4.5e-145
Identity = 275/402 (68.41%), Postives = 310/402 (77.11%), Query Frame = 0


Query: 4   LRPDLTSKIYPEPDSF-CIDHFDRLPDSLLLLIFNQIGDVKALGRCCVVSRRFHCLVPQV 63
           LR D  S+I+PEP S    DHFD LPDSLLLLIF+++ DVK LGRCC+VSRRFH LVP V
Sbjct: 5   LRSDPVSRIHPEPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFV 64

Query: 64  DNVLVRVDCVISDDDSSSSS------------SASGKSRGPFFNLFRFVFGGIVKPFQAL 123
           +NVLVRVDCVISDDDSSSS             S +G + G F  LFR VF  I KPFQ L
Sbjct: 65  ENVLVRVDCVISDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQML 124

Query: 124 GQFLGQTRASSTLASSSSTSSLAVGADEDVEIDQSGVTHHSPTQVLKNFNEIRFLRIELP 183
           GQ LG  R+SS+  +S S  +           D+ GVTHHSPTQVLKNF EIRFL+IELP
Sbjct: 125 GQILGPKRSSSSFDASFSAIN-----------DEIGVTHHSPTQVLKNFGEIRFLKIELP 184

Query: 184 SGELGIDDGVLLKWRADFGSTLDNCVILGASSVIQPGSIKPSTAQDNNTDIGFCIGNGVA 243
           +GELGI+DG+LLKWRADFGSTLDNC+ILGASSVIQ  S+K     +N+ D          
Sbjct: 185 TGELGIEDGILLKWRADFGSTLDNCMILGASSVIQSNSVK---NHENSVD---------- 244

Query: 244 NDDNGSIPESFYTNGGLKLRVVWTISSIIAASARHYLLQPIIADHKTLDSLVLTDADGQG 303
            +DNG+IPESFYTNGGLKLRVVWTISS+IAASARHYLLQPII +HK+LD LVL+DADGQG
Sbjct: 245 -EDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQG 304

Query: 304 VLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYATHLELPNGLILKGATLVAIRPS 363
           VLCMNR+QLEELRV PLSASSASKRTLVPALNMRLWYA  L+LP+G +LKGATLVAIRPS
Sbjct: 305 VLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAPELDLPDGTVLKGATLVAIRPS 364

Query: 364 EQSAAKEVSDCSWASTAFEEPYRTAAKMLVKRRTYCLEMNSF 393
           E  + KEV D SW S AFEEP+ T AKML+KRRTYCLEMNSF
Sbjct: 365 E--SKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYCLEMNSF 379

The following BLAST results are available for this feature:

BLAST of Sed0001998 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137366.1	2.3e-204	90.89	F-box protein At5g46170 [Cucumis sativus] >XP_011649352.1 F-box protein At5g4617...	[more]
XP_008444512.1	5.2e-204	90.64	PREDICTED: F-box protein At5g46170-like [Cucumis melo] >XP_008444520.1 PREDICTED...	[more]
XP_038895389.1	9.2e-201	88.89	F-box protein At5g46170-like [Benincasa hispida]	[more]
XP_022140089.1	6.6e-199	90.48	F-box protein At5g46170-like [Momordica charantia]	[more]
KAG7019504.1	8.6e-199	88.40	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0001998 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNK5	7.9e-163	77.41	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
O49508	7.7e-150	73.45	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
Q9C534	6.3e-144	68.41	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]
Q9LM18	1.0e-45	32.89	F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1	[more]
Q9C9S2	9.7e-44	30.91	F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1	[more]

BLAST of Sed0001998 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSD6	1.1e-204	90.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025900 PE=4 SV=1	[more]
A0A1S3BB83	2.5e-204	90.64	F-box protein At5g46170-like OS=Cucumis melo OX=3656 GN=LOC103487806 PE=4 SV=1	[more]
A0A5D3DAY7	2.5e-204	90.64	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00740 ...	[more]
A0A6J1CER8	3.2e-199	90.48	F-box protein At5g46170-like OS=Momordica charantia OX=3673 GN=LOC111010828 PE=4...	[more]
A0A6J1ENW9	4.2e-199	88.40	F-box protein At5g46170-like OS=Cucurbita moschata OX=3662 GN=LOC111434258 PE=4 ...	[more]

BLAST of Sed0001998 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46170.1	5.6e-164	77.41	F-box family protein	[more]
AT4G18380.1	5.5e-151	73.45	F-box family protein	[more]
AT4G18380.2	5.5e-151	73.45	F-box family protein	[more]
AT1G30200.2	4.5e-145	68.41	F-box family protein	[more]
AT1G30200.1	4.5e-145	68.41	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 25..59 e-value: 1.2E-5 score: 25.1
None	No IPR available	PANTHER	PTHR31215:SF29	F-BOX FAMILY PROTEIN-RELATED	coord: 9..392
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 9..392
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 16..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001998.1	Sed0001998.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding