Sed0001986 (gene) Chayote v1

Overview


Name	Sed0001986
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	LG07: 14583241 .. 14584750 (-)
RNA-Seq Expression	Sed0001986
Synteny	Sed0001986

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAGAGAGAGAAAGTGTAATGAATAATTTGTGCAGCAACTGCAACATAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAAACAGAGAAGAAGTAGAAAAAATATGTGTGGATTTGGAAGTTTTGTTTCTCTGTGTATTTAAGTTAGCACCGCCCTTCCCTCATGGCGGCGCCGTTGCAGACTTCAGTTCAGTTTTAGACACACAAAACACATCATTTCTCTTTTTCATTTTTTTCTTCTGGTACGAGAATTTGATTTCATTAGGTGAAAAAAAATGGAAGGGAATTGAGTGGTACATACCTTTCTTTTTTTTTCTGGTATGGATTTTATTTCAAAATTAGGAACAATCTCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGGACACAATTTTCACGTTCCCACCACCACAACCGGCGGCGAGATTATCCATCCCACCGACGGGTTATTTTGGTACAAAAATTATGAGAGCTTTGAATTATGGCAGCAGCAACAAGAACAAGGGGGAGAAGGGTTTGGTTACTCCGGCGAGGAATCGCCGCCAAGGTCGTCGTTGGTGATGGTGAGATCCGGCAGAGGCGGCTGCGGAGGGCAAGTTATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGCAAAAGCCGTGGCTTTGAATGTGAAACCCACGTCAAAAGCACTTGGATTCCGGTCTCCAAACGCCGTGAACGGCAGCCCCGTAACGGCGACAATAACCCCAAACGCCCCCGTGACAGCAACGCCGCCGCCTCTTCAGGTACAATTAATTAATTACACAAATTTCAATTTTTTTTTTACGAGGGTTTTGATTTTTGAGATATTTTCAAATTCGATCAATACCCACATCGATTTTGGTCATGATTGAGAGAATCGAACTCTAAAACACGATTTCTGAAATGGGGATTTTTTTTTTTATGTTTTCGGGGTTTTTCTTTTTAGGGTTTGAAATGGGGAATTTGCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGTGTACGGATGACAACGTTGGACGAAACAAGCGACCAATACGGTTACCAAACGGCCGTTAACATCGGCGGCCATATTTTCAAAGGGATTCTTTACGACCACGGCCCCGACCACCACCACCATCAACAACAACAACCACCCAACTCCGCCTCCCCCGACGGCGGCGCCCTCCTCTCGCCGCCCATCAGCGCTGCATTGCTTGATCCCCTTCCGCCGTACCCAACTCCTCTCACCACCTACACCGCCGCCGGTACGCAATTCTTCCTTCCCCCAACATCCTAAGTGAATATTTATGATATTACCATTTAAGTGAAATTGAGAGGAAAAATAAAAAAACAAAAATCTGAGAATATTATTATGAAGTATGTTTGTGTCATAAGTATATAGTTTTTTTTTTATGATAAATTTATAAGCATGTAATTTTTCTTTCAAGATTTTGCATTAATATGTGC

mRNA sequence

AAAGAAGAGAGAGAAAGTGTAATGAATAATTTGTGCAGCAACTGCAACATAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAAACAGAGAAGAAGTAGAAAAAATATGTGTGGATTTGGAAGTTTTGTTTCTCTGTGTATTTAAGTTAGCACCGCCCTTCCCTCATGGCGGCGCCGTTGCAGACTTCAGTTCAGTTTTAGACACACAAAACACATCATTTCTCTTTTTCATTTTTTTCTTCTGGTACGAGAATTTGATTTCATTAGGTGAAAAAAAATGGAAGGGAATTGAGTGGTACATACCTTTCTTTTTTTTTCTGGTATGGATTTTATTTCAAAATTAGGAACAATCTCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGGACACAATTTTCACGTTCCCACCACCACAACCGGCGGCGAGATTATCCATCCCACCGACGGGTTATTTTGGTACAAAAATTATGAGAGCTTTGAATTATGGCAGCAGCAACAAGAACAAGGGGGAGAAGGGTTTGGTTACTCCGGCGAGGAATCGCCGCCAAGGTCGTCGTTGGTGATGGTGAGATCCGGCAGAGGCGGCTGCGGAGGGCAAGTTATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGCAAAAGCCGTGGCTTTGAATGTGAAACCCACGTCAAAAGCACTTGGATTCCGGTCTCCAAACGCCGTGAACGGCAGCCCCGTAACGGCGACAATAACCCCAAACGCCCCCGTGACAGCAACGCCGCCGCCTCTTCAGGGTTTGAAATGGGGAATTTGCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGTGTACGGATGACAACGTTGGACGAAACAAGCGACCAATACGGTTACCAAACGGCCGTTAACATCGGCGGCCATATTTTCAAAGGGATTCTTTACGACCACGGCCCCGACCACCACCACCATCAACAACAACAACCACCCAACTCCGCCTCCCCCGACGGCGGCGCCCTCCTCTCGCCGCCCATCAGCGCTGCATTGCTTGATCCCCTTCCGCCGTACCCAACTCCTCTCACCACCTACACCGCCGCCGGTACGCAATTCTTCCTTCCCCCAACATCCTAAGTGAATATTTATGATATTACCATTTAAGTGAAATTGAGAGGAAAAATAAAAAAACAAAAATCTGAGAATATTATTATGAAGTATGTTTGTGTCATAAGTATATAGTTTTTTTTTTATGATAAATTTATAAGCATGTAATTTTTCTTTCAAGATTTTGCATTAATATGTGC

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGGACACAATTTTCACGTTCCCACCACCACAACCGGCGGCGAGATTATCCATCCCACCGACGGGTTATTTTGGTACAAAAATTATGAGAGCTTTGAATTATGGCAGCAGCAACAAGAACAAGGGGGAGAAGGGTTTGGTTACTCCGGCGAGGAATCGCCGCCAAGGTCGTCGTTGGTGATGGTGAGATCCGGCAGAGGCGGCTGCGGAGGGCAAGTTATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGCAAAAGCCGTGGCTTTGAATGTGAAACCCACGTCAAAAGCACTTGGATTCCGGTCTCCAAACGCCGTGAACGGCAGCCCCGTAACGGCGACAATAACCCCAAACGCCCCCGTGACAGCAACGCCGCCGCCTCTTCAGGGTTTGAAATGGGGAATTTGCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGTGTACGGATGACAACGTTGGACGAAACAAGCGACCAATACGGTTACCAAACGGCCGTTAACATCGGCGGCCATATTTTCAAAGGGATTCTTTACGACCACGGCCCCGACCACCACCACCATCAACAACAACAACCACCCAACTCCGCCTCCCCCGACGGCGGCGCCCTCCTCTCGCCGCCCATCAGCGCTGCATTGCTTGATCCCCTTCCGCCGTACCCAACTCCTCTCACCACCTACACCGCCGCCGGTACGCAATTCTTCCTTCCCCCAACATCCTAA

Protein sequence

MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

Homology

[Close]

BLAST of Sed0001986 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.7 bits (1031), Expect = 4.7e-108
Identity = 211/278 (75.90%), Postives = 225/278 (80.94%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGY 60
           MAGF+PLGGGR  N+H+PTTTT       TDGLFWY+NYES E+WQQQ  Q+Q GEGF Y
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTT-----TTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVY 60

Query: 61  SGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVK 120
           SG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGF+CETHVK
Sbjct: 61  SGDESPPRSSLVMLRSGRNG-GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVK 120

Query: 121 STWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDE 180
           STW+P SKRRER  R+   N KRPRD N AASSG EMGN PVEVSSTAVFRCVRMTTLDE
Sbjct: 121 STWVPASKRRERHLRSDGTNLKRPRD-NTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDE 180

Query: 181 TSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQ-----PPNSASPDGGALL------ 240
           T+DQ+ YQTAVNIGGH FKGILYDHGP+    QQQQ     PPNSASPDGG LL      
Sbjct: 181 TNDQFAYQTAVNIGGHTFKGILYDHGPE----QQQQPPPPPPPNSASPDGGTLLITAPST 240

Query: 241 ---SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
               PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Sbjct: 241 TMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 267

[Close]

BLAST of Sed0001986 vs. NCBI nr
Match: XP_022982329.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 401.4 bits (1030), Expect = 6.1e-108
Identity = 211/276 (76.45%), Postives = 225/276 (81.52%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGY 60
           MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF Y
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTT-------TDGLFWYRNYESLGIWQQQQVQQQAGEGFVY 60

Query: 61  SGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVK 120
           SG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGF+CETHVK
Sbjct: 61  SGDESPPRSSLVMLRSGRNG-GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVK 120

Query: 121 STWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDE 180
           STW+P SKRRER  R+   N KRPRD N AASSG EMGN P+EVSSTAVFRCVRMTTLDE
Sbjct: 121 STWVPASKRRERHLRSDATNLKRPRD-NTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDE 180

Query: 181 TSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQ---PPNSASPDGGALL-------- 240
           T+DQ+ YQTAVNIGGH FKGILYDHGP+    QQQQ   PPNSASPDGGALL        
Sbjct: 181 TNDQFAYQTAVNIGGHTFKGILYDHGPE----QQQQPPPPPNSASPDGGALLITAPTTTM 240

Query: 241 -SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
             PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Sbjct: 241 ELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Sed0001986 vs. NCBI nr
Match: XP_038881630.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/275 (76.73%), Postives = 222/275 (80.73%), Query Frame = 0


Query: 1   MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQ 60
           MAGFFPL G    GRG N+  PTTTT     GGEIIHPTDGLFWYKNYE  E W   QQQ
Sbjct: 1   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHPTDGLFWYKNYERLETWEEQQQQ 60

Query: 61  QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKS 120
           QEQGGEGF YSG+ESP RSSLVMVRSGRGG GGQV+SCQDCGNQAKKDC+HMRCRTCCKS
Sbjct: 61  QEQGGEGFVYSGDESPARSSLVMVRSGRGGSGGQVMSCQDCGNQAKKDCVHMRCRTCCKS 120

Query: 121 RGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVF 180
           RGFECETHVKSTW+P SKRRER  R   +NPKRP+D   AASSG EMG  P EVSSTAVF
Sbjct: 121 RGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKD---AASSGLEMGIFPAEVSSTAVF 180

Query: 181 RCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL- 240
           RCVRMTTLDETS+Q  YQTAVNIGGHIFKGILYDHGP       +QPP SASP+GGALL 
Sbjct: 181 RCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGP-------EQPPTSASPNGGALLI 240

Query: 241 SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
           +   SA LLDP PPYPTPLTTY  AGTQFFLPPTS
Sbjct: 241 TTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 265

[Close]

BLAST of Sed0001986 vs. NCBI nr
Match: XP_038881624.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107
Identity = 211/275 (76.73%), Postives = 222/275 (80.73%), Query Frame = 0


Query: 1   MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQ 60
           MAGFFPL G    GRG N+  PTTTT     GGEIIHPTDGLFWYKNYE  E W   QQQ
Sbjct: 4   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTTGGGEIIHPTDGLFWYKNYERLETWEEQQQQ 63

Query: 61  QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKS 120
           QEQGGEGF YSG+ESP RSSLVMVRSGRGG GGQV+SCQDCGNQAKKDC+HMRCRTCCKS
Sbjct: 64  QEQGGEGFVYSGDESPARSSLVMVRSGRGGSGGQVMSCQDCGNQAKKDCVHMRCRTCCKS 123

Query: 121 RGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVF 180
           RGFECETHVKSTW+P SKRRER  R   +NPKRP+D   AASSG EMG  P EVSSTAVF
Sbjct: 124 RGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKD---AASSGLEMGIFPAEVSSTAVF 183

Query: 181 RCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL- 240
           RCVRMTTLDETS+Q  YQTAVNIGGHIFKGILYDHGP       +QPP SASP+GGALL 
Sbjct: 184 RCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGP-------EQPPTSASPNGGALLI 243

Query: 241 SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
           +   SA LLDP PPYPTPLTTY  AGTQFFLPPTS
Sbjct: 244 TTAESATLLDPPPPYPTPLTTYIPAGTQFFLPPTS 268

[Close]

BLAST of Sed0001986 vs. NCBI nr
Match: XP_023552309.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 211/278 (75.90%), Postives = 225/278 (80.94%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGY 60
           MAGF+PLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF Y
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTT----TTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVY 60

Query: 61  SGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVK 120
           SG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGF+CETHVK
Sbjct: 61  SGDESPPRSSLVMLRSGRNG-GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVK 120

Query: 121 STWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDE 180
           STW+P SKRRER  R+   N KRPRD N AASSG EMGNLPVEVSSTAVFRCVRMTTLDE
Sbjct: 121 STWVPASKRRERHLRSDGTNLKRPRD-NTAASSGLEMGNLPVEVSSTAVFRCVRMTTLDE 180

Query: 181 TSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQ-----PPNSASPDGGALL------ 240
           T+DQ+ YQTAVNIGGH FKGILYDHGP+    QQQQ     PPNSASPDGGALL      
Sbjct: 181 TNDQFAYQTAVNIGGHTFKGILYDHGPE----QQQQPPPPPPPNSASPDGGALLITAPST 240

Query: 241 ---SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
               PPIS ALLDP PPYP PL TY AAGTQFFLPPTS
Sbjct: 241 TMELPPISTALLDPPPPYPAPLNTYVAAGTQFFLPPTS 268

[Close]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-47
Identity = 133/359 (37.05%), Postives = 178/359 (49.58%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN--------------YESFELWQ 60
           MA FF LGG +    H   +++   +   ++  F Y+N              Y+ FELWQ
Sbjct: 1   MANFFSLGGNQEQQ-HQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGFELWQ 60

Query: 61  ------------QQQEQ----------------------GGEGFGYS-GEESPPRSSLVM 120
                       QQQ+Q                         GF  S G+    RS  VM
Sbjct: 61  SGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRSGFVM 120

Query: 121 VRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ 180
           +RSG GG     ISCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+P +KRRERQ
Sbjct: 121 MRSGGGG-----ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ 180

Query: 181 PR--------------NGDNNPKRPRDSNAAAS----------SGFEMGNLPVEVSSTAV 240
            +              N ++  KR R+  +A+S          +G E+G  P +V ++AV
Sbjct: 181 QQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRTSAV 240

Query: 241 FRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPD--------------------- 263
           F+C++M+++++  DQ  YQ AV+IGGH+FKGILYD G +                     
Sbjct: 241 FQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGSAGG 300

[Close]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46
Identity = 139/371 (37.47%), Postives = 179/371 (48.25%), Query Frame = 0


Query: 1   MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------- 60
           MAGFF L     GGG G N      +        ++   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YESFELWQQQQEQ-------------------GGEG--------FGYSGEESPP- 120
                  + ELWQ   +Q                    G G        F  SGE S   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWI 180
               ++++M+RSG  G G   +SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STW+
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PVSKRRERQPR-----------NGDNNPKRPRDSNAAAS-----------SGFEMGNLPV 240
           P +KRRERQ +            G++ PKR R++  A S           SG E+GN P 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------ 263
           EVSS+AVFRCVR++++++  +++ YQTAV+IGGHIFKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-45
Identity = 135/330 (40.91%), Postives = 166/330 (50.30%), Query Frame = 0


Query: 1   MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW 60
           MAGFF LG GG G+      T T       T+   W +N  S               ELW
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ------------QQQQEQ--------GGEGFGYSGEESPPRS--SLVMVRSGRGGCGGQV 120
                       QQQQ+Q         G G G S       S  +L+M+RSG G  G   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRN 180
            SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTW+P +KRRERQ          + 
Sbjct: 121 -SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQL 180

Query: 181 GDNNPKRPRDSNAAAS-------------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSD 240
           G + PKR R+   A S             SG E+GN P EVSS+AVFRCVR++++D+  +
Sbjct: 181 GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEE 240

Query: 241 QYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP--------- 258
           +Y Y+TAV+IGGH+FKG+LYD GP          QP N  +    A  S P         
Sbjct: 241 EYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVV 300

[Close]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.9e-41
Identity = 126/341 (36.95%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQE 60
           MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+
Sbjct: 1   MAGLFYL-GGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QG--------------GEGFGYSGEESPPRSSLVMVRSG----RGGCGGQVI------SC 120
           Q                 G   +   S  RS    V S     R   GG  +      +C
Sbjct: 61  QNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNC 120

Query: 121 QDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN 180
           QDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 A--------------------------------AASSGFEMGNLPVEVSSTAVFRCVRMT 240
           +                                A+SSG E  +LP E+SS AVFRC+R++
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 TLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA 258
           ++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.4e-40
Identity = 129/347 (37.18%), Postives = 168/347 (48.41%), Query Frame = 0


Query: 1   MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------ 60
           MAGFF LGG     +N          +  H   ++ L+ YK     N + FE+W      
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------QQQQEQGG-------------EGFGYSGEESPPRSSLVMVRSGRGGCGGQV--- 120
                 QQQQ+Q                G   +   +  RS    V S     G  V   
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 --ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------ 180
             ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+P +KRRE            
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 ------------RQPRNGDNNPKR------------PRDSNAAASSGFEMG-NLPVEVSS 240
                       R+   GDNN  +             R  NA ++SG E+  +LP EV+S
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 TAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS 263
            A+FRCVR+++++E  D   Y YQTAVNIGGHIFKGILYD GP+H  +HH       + +
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

[Close]

BLAST of Sed0001986 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.0e-108
Identity = 211/276 (76.45%), Postives = 225/276 (81.52%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGY 60
           MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF Y
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTT-------TDGLFWYRNYESLGIWQQQQVQQQAGEGFVY 60

Query: 61  SGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVK 120
           SG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGF+CETHVK
Sbjct: 61  SGDESPPRSSLVMLRSGRNG-GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVK 120

Query: 121 STWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDE 180
           STW+P SKRRER  R+   N KRPRD N AASSG EMGN P+EVSSTAVFRCVRMTTLDE
Sbjct: 121 STWVPASKRRERHLRSDATNLKRPRD-NTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDE 180

Query: 181 TSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQ---PPNSASPDGGALL-------- 240
           T+DQ+ YQTAVNIGGH FKGILYDHGP+    QQQQ   PPNSASPDGGALL        
Sbjct: 181 TNDQFAYQTAVNIGGHTFKGILYDHGPE----QQQQPPPPPNSASPDGGALLITAPTTTM 240

Query: 241 -SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
             PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Sbjct: 241 ELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Sed0001986 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 8.6e-108
Identity = 207/273 (75.82%), Postives = 220/273 (80.59%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGY 60
           MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF Y
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTT-----TTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVY 60

Query: 61  SGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVK 120
           SG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGF+CETHVK
Sbjct: 61  SGDESPPRSSLVMLRSGRNG-GGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVK 120

Query: 121 STWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDE 180
           STW+P SKRRER  R+   N KRPRD N AASSG EM N PVEVSSTAVFRCVRMTTLDE
Sbjct: 121 STWVPASKRRERHLRSDGTNLKRPRD-NTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDE 180

Query: 181 TSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL---------SP 240
           T+DQ+ YQTAVNIGGH FKGILYDHGP+        PPNSASPDGGALL          P
Sbjct: 181 TNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPDGGALLITAPSTTMELP 240

Query: 241 PISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
           PISAALLDP PPYP PL TY AAGTQFFLPPTS
Sbjct: 241 PISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Sed0001986 vs. ExPASy TrEMBL
Match: A0A6J1EMT4 (protein SHI RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111436020 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.9e-97
Identity = 197/267 (73.78%), Postives = 212/267 (79.40%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSG 60
           MAGFFPLGGG G        ++GGEIIHPTDGL WYKNYESFE   +QQ+QGGEGF YSG
Sbjct: 1   MAGFFPLGGGGG-------GSSGGEIIHPTDGLLWYKNYESFE--TEQQQQGGEGFVYSG 60

Query: 61  EESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKST 120
           E SP RSSLVMVRSG    GG+VISCQDCGNQAKKDC+HMRCRTCCKSRGF CETHVKST
Sbjct: 61  ENSPARSSLVMVRSG----GGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKST 120

Query: 121 WIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET- 180
           W+P SKRRER  R    + KRPRD++ AASSGFE+GN P EV+STAVFRCVRMTTLDE  
Sbjct: 121 WVPASKRRERLIRTAGGDSKRPRDTH-AASSGFEIGNFPAEVNSTAVFRCVRMTTLDEPT 180

Query: 181 -SDQYGYQTAVNIGGHIFKGILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAAL 240
            +DQY YQTAVNIGGHIFKGILYDHGPD  HHHH    PP SASPDGGALL +   SAA 
Sbjct: 181 GTDQYAYQTAVNIGGHIFKGILYDHGPDQQHHHH---NPPISASPDGGALLITTAESAAP 240

Query: 241 LDPLPPYPTPLTTYTAAGTQFFLPPTS 263
           LDP P YP PL +Y  AGTQFF PPTS
Sbjct: 241 LDPPPSYPAPLNSYIPAGTQFFQPPTS 250

[Close]

BLAST of Sed0001986 vs. ExPASy TrEMBL
Match: A0A6J1J673 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482954 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.5e-96
Identity = 194/267 (72.66%), Postives = 212/267 (79.40%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSG 60
           MAGFFPLGGG G        ++GGEIIHPTDGL WYKNYESFE   +QQ+QGGE FGYSG
Sbjct: 1   MAGFFPLGGGGG-------GSSGGEIIHPTDGLLWYKNYESFE--TEQQQQGGERFGYSG 60

Query: 61  EESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKST 120
           E SP RSSLVMVRSG  G GG+VISCQDCGNQAKKDC+HMRCRTCCKSRGF CETHVKST
Sbjct: 61  ENSPARSSLVMVRSGGDGGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKST 120

Query: 121 WIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET- 180
           W+P SKRRER       + KRPRD++ A SSGFE+GN P E++STAVFRCVRMTTLDE  
Sbjct: 121 WVPASKRRERLISTTGGDSKRPRDTH-ATSSGFEIGNFPAEINSTAVFRCVRMTTLDEPT 180

Query: 181 -SDQYGYQTAVNIGGHIFKGILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAAL 240
            +DQY YQTAVNIGGHIFKGIL+DHGPD   HHH    PP SASPDGGALL +   SAAL
Sbjct: 181 GTDQYAYQTAVNIGGHIFKGILHDHGPDQQQHHH---NPPISASPDGGALLITTADSAAL 240

Query: 241 LDPLPPYPTPLTTYTAAGTQFFLPPTS 263
           LDP P YP PL++Y  AGTQFF PPTS
Sbjct: 241 LDPPPSYPAPLSSYITAGTQFFQPPTS 254

[Close]

BLAST of Sed0001986 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.1e-94
Identity = 192/279 (68.82%), Postives = 210/279 (75.27%), Query Frame = 0


Query: 1   MAGFFPL----GGGRGHNFHVPTTTTGGEIIHP-TDGLFWYKNYESFELW-------QQQ 60
           MAGFFPL     GGR  N+H PT TTGGEIIHP T+GLFWYKNYE  E W       QQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQ 60

Query: 61  --QEQGGEGFGYSGEESPPRSSLVMVRSGR--GGCGGQVISCQDCGNQAKKDCLHMRCRT 120
             QEQGGEGF YSG+ESP RSSLVMVRSGR  GG GG V SCQDCGNQAKKDC+HMRCRT
Sbjct: 61  PAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRT 120

Query: 121 CCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN-AAASSGFEMGNLPVEVS 180
           CCKSRGFECETHVKSTW+P SKRR+R  R+   N KRP+D++    SSG +MGN P EV+
Sbjct: 121 CCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVT 180

Query: 181 STAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDG 240
           + AVFRCVRMT+LDET DQY YQTAVNIGG IFKGILYDHGP     +Q  PP S+S   
Sbjct: 181 TPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGP-----EQPPPPPSSS--- 240

Query: 241 GALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS 263
                   SAALLDP PPYPTPL+TY  AGTQFFLPP+S
Sbjct: 241 --------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Sed0001986 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 188.3 bits (477), Expect = 7.6e-48
Identity = 139/371 (37.47%), Postives = 179/371 (48.25%), Query Frame = 0


Query: 1   MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------- 60
           MAGFF L     GGG G N      +        ++   WY+N                 
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  -----YESFELWQQQQEQ-------------------GGEG--------FGYSGEESPP- 120
                  + ELWQ   +Q                    G G        F  SGE S   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWI 180
               ++++M+RSG  G G   +SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STW+
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PVSKRRERQPR-----------NGDNNPKRPRDSNAAAS-----------SGFEMGNLPV 240
           P +KRRERQ +            G++ PKR R++  A S           SG E+GN P 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------ 263
           EVSS+AVFRCVR++++++  +++ YQTAV+IGGHIFKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of Sed0001986 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-46
Identity = 135/330 (40.91%), Postives = 166/330 (50.30%), Query Frame = 0


Query: 1   MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW 60
           MAGFF LG GG G+      T T       T+   W +N  S               ELW
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ------------QQQQEQ--------GGEGFGYSGEESPPRS--SLVMVRSGRGGCGGQV 120
                       QQQQ+Q         G G G S       S  +L+M+RSG G  G   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRN 180
            SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTW+P +KRRERQ          + 
Sbjct: 121 -SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQL 180

Query: 181 GDNNPKRPRDSNAAAS-------------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSD 240
           G + PKR R+   A S             SG E+GN P EVSS+AVFRCVR++++D+  +
Sbjct: 181 GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEE 240

Query: 241 QYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP--------- 258
           +Y Y+TAV+IGGH+FKG+LYD GP          QP N  +    A  S P         
Sbjct: 241 EYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVV 300

[Close]

BLAST of Sed0001986 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-42
Identity = 126/341 (36.95%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQE 60
           MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+
Sbjct: 1   MAGLFYL-GGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QG--------------GEGFGYSGEESPPRSSLVMVRSG----RGGCGGQVI------SC 120
           Q                 G   +   S  RS    V S     R   GG  +      +C
Sbjct: 61  QNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNC 120

Query: 121 QDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN 180
           QDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 A--------------------------------AASSGFEMGNLPVEVSSTAVFRCVRMT 240
           +                                A+SSG E  +LP E+SS AVFRC+R++
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 TLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA 258
           ++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of Sed0001986 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-42
Identity = 126/341 (36.95%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 1   MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQE 60
           MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+
Sbjct: 1   MAGLFYL-GGRDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQQQ 60

Query: 61  QG--------------GEGFGYSGEESPPRSSLVMVRSG----RGGCGGQVI------SC 120
           Q                 G   +   S  RS    V S     R   GG  +      +C
Sbjct: 61  QNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNC 120

Query: 121 QDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN 180
           QDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N
Sbjct: 121 QDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDAN 180

Query: 181 A--------------------------------AASSGFEMGNLPVEVSSTAVFRCVRMT 240
           +                                A+SSG E  +LP E+SS AVFRC+R++
Sbjct: 181 SRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAVFRCMRVS 240

Query: 241 TLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA 258
           ++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Sbjct: 241 SIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETSHQHHLNLMDSTPS 300

[Close]

BLAST of Sed0001986 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 165.6 bits (418), Expect = 5.3e-41
Identity = 129/347 (37.18%), Postives = 168/347 (48.41%), Query Frame = 0


Query: 1   MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------ 60
           MAGFF LGG     +N          +  H   ++ L+ YK     N + FE+W      
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 61  ------QQQQEQGG-------------EGFGYSGEESPPRSSLVMVRSGRGGCGGQV--- 120
                 QQQQ+Q                G   +   +  RS    V S     G  V   
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQ 120

Query: 121 --ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------ 180
             ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+P +KRRE            
Sbjct: 121 GGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHS 180

Query: 181 ------------RQPRNGDNNPKR------------PRDSNAAASSGFEMG-NLPVEVSS 240
                       R+   GDNN  +             R  NA ++SG E+  +LP EV+S
Sbjct: 181 ASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVNS 240

Query: 241 TAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS 263
            A+FRCVR+++++E  D   Y YQTAVNIGGHIFKGILYD GP+H  +HH       + +
Sbjct: 241 PAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTATT 300

The following BLAST results are available for this feature:

BLAST of Sed0001986 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031235.1	4.7e-108	75.90	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022982329.1	6.1e-108	76.45	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein S...	[more]
XP_038881630.1	1.0e-107	76.73	protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]	[more]
XP_038881624.1	1.0e-107	76.73	protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]	[more]
XP_023552309.1	1.4e-107	75.90	protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0001986 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4B6C9	1.6e-47	37.05	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9SD40	1.1e-46	37.47	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	1.5e-45	40.91	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9FXH7	3.9e-41	36.95	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]
Q9LQZ5	7.4e-40	37.18	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]

BLAST of Sed0001986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J480	3.0e-108	76.45	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]
A0A6J1FUH1	8.6e-108	75.82	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A6J1EMT4	6.9e-97	73.78	protein SHI RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC11143602...	[more]
A0A6J1J673	1.5e-96	72.66	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482954 ...	[more]
A0A0A0KUG2	1.1e-94	68.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]

BLAST of Sed0001986 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	7.6e-48	37.47	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	1.1e-46	40.91	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	2.8e-42	36.95	SHI-related sequence 7	[more]
AT1G19790.2	2.8e-42	36.95	SHI-related sequence 7	[more]
AT1G75520.1	5.3e-41	37.18	SHI-related sequence 5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 85..127 e-value: 1.0E-27 score: 93.8
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 158..205 e-value: 3.8E-24 score: 82.3
None	No IPR available	PFAM	PF05142	DUF702	coord: 84..206 e-value: 1.1E-51 score: 175.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..140
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..258
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001986.1	Sed0001986.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding