Sed0001967 (gene) Chayote v1

Overview


Name	Sed0001967
Type	gene
Organism	Sechium edule (Chayote v1)
Description	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Location	LG04: 44657473 .. 44658218 (-)
RNA-Seq Expression	Sed0001967
Synteny	Sed0001967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACTCGGTGTGCCATACATGGGGAACTAAACAATGGAAAAATGACGATTTGTCAAGAAACAATTGGTGAGTCTATATCTTCTATGTCAAATCACAAATGAAAGATAATTTAAATGTCTAGCGTAATTGTGAAGACTTGAACTATGAACGTACCTTCTCTTTTAAGGTTTCAAGTTCAAAACTCACTTGTAACATTACTTTTTAATAAAATTGAATTACAACTAATCAACCAAGACAACATATGATTTATACGTATAGTTCTTGTTGGCGTATATGTATTATTAATATAATATTATATGTTATTAGTAAAATATGGTGTATTAATACAGTATTATGTATTAATTATATCATGTAACTTAAAAAACTCCTTGAAATTAACATCAAATCAAAAGAAATTTAGAAAATAAGAATGAAAATAGTACTCTAATGATATTATGTATCAAATATTAACTATTTAGTTATGAGTTTTAATCCCAAATATTGTTAAACTCGAACAAAAAAGAATTGATATTCTATTTATTTGTTTTTAGGTTGATTGGTTTAGTTGGATTTGGGGAAGGTTGGCACAATAATCACCATGCCTTTGAGTATTCAGCCCAGTTTGGTTTGGAGTGGTGGCAGATTGACTTTGGTTGGTATGTGATAATGTTCCTTCAAGCAATTGGAGTGGCCACTAATGTTAAAGTGCCTTCCCAAACCCACAAGCAAAACATGGCTATCACCAATCAAAACACTGCTTGA

mRNA sequence

ATGGTGAACTCGGTGTGCCATACATGGGGAACTAAACAATGGAAAAATGACGATTTGTCAAGAAACAATTGGTTGATTGGTTTAGTTGGATTTGGGGAAGGTTGGCACAATAATCACCATGCCTTTGAGTATTCAGCCCAGTTTGGTTTGGAGTGGTGGCAGATTGACTTTGGTTGGTATGTGATAATGTTCCTTCAAGCAATTGGAGTGGCCACTAATGTTAAAGTGCCTTCCCAAACCCACAAGCAAAACATGGCTATCACCAATCAAAACACTGCTTGA

Coding sequence (CDS)

ATGGTGAACTCGGTGTGCCATACATGGGGAACTAAACAATGGAAAAATGACGATTTGTCAAGAAACAATTGGTTGATTGGTTTAGTTGGATTTGGGGAAGGTTGGCACAATAATCACCATGCCTTTGAGTATTCAGCCCAGTTTGGTTTGGAGTGGTGGCAGATTGACTTTGGTTGGTATGTGATAATGTTCCTTCAAGCAATTGGAGTGGCCACTAATGTTAAAGTGCCTTCCCAAACCCACAAGCAAAACATGGCTATCACCAATCAAAACACTGCTTGA

Protein sequence

MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWYVIMFLQAIGVATNVKVPSQTHKQNMAITNQNTA

Homology

[Close]

BLAST of Sed0001967 vs. NCBI nr
Match: XP_022158246.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38
Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG + WKN DLSRNN  +GL+GFGEGWHNNHHAFEYSA+FGLEWWQIDFGWY
Sbjct: 225 MVNSVCHIWGKQPWKNGDLSRNNGWVGLLGFGEGWHNNHHAFEYSARFGLEWWQIDFGWY 284

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITNQ 91
           VI  LQAIGVATNVKVPSQ+HKQ +  TNQ
Sbjct: 285 VIRLLQAIGVATNVKVPSQSHKQRLGTTNQ 314

[Close]

BLAST of Sed0001967 vs. NCBI nr
Match: XP_038903307.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 4.5e-37
Identity = 72/93 (77.42%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNS+CHTWG + WKN++LS NNWL+GLV +GEGWHNNHHAFEYSA+FGLEWW+IDFGWY
Sbjct: 216 MVNSICHTWGKQPWKNNNLSTNNWLLGLVVYGEGWHNNHHAFEYSARFGLEWWEIDFGWY 275

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITNQNTA 94
           VIM LQAIGVATNVK PSQ HKQ M   NQN +
Sbjct: 276 VIMLLQAIGVATNVKQPSQAHKQRM---NQNAS 305

[Close]

BLAST of Sed0001967 vs. NCBI nr
Match: XP_011652978.2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus] >KAE8649060.1 hypothetical protein Csa_015380 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 4.9e-36
Identity = 68/87 (78.16%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG + WK +DLS NNWL+GL+GFGEGWHNNHHAFEYSA+ GLEWW+IDFGWY
Sbjct: 231 MVNSVCHIWGKQLWKTNDLSTNNWLVGLLGFGEGWHNNHHAFEYSARHGLEWWEIDFGWY 290

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           VIMFLQAIGVAT+VKVP Q HK+ +A+
Sbjct: 291 VIMFLQAIGVATHVKVPLQHHKKKLAM 317

[Close]

BLAST of Sed0001967 vs. NCBI nr
Match: KGN52908.2 (hypothetical protein Csa_014723 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG KQW   DLSRNNW + L+ FGEGWHNNHHAFEYSA++GLEWWQ+DFGWY
Sbjct: 214 MVNSVCHKWGKKQWSTTDLSRNNWWVSLLSFGEGWHNNHHAFEYSAKYGLEWWQLDFGWY 273

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           VIMFL+AIGVAT+VK+P+Q HKQ M +
Sbjct: 274 VIMFLKAIGVATDVKLPTQCHKQRMKL 300

[Close]

BLAST of Sed0001967 vs. NCBI nr
Match: XP_031739648.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG KQW   DLSRNNW + L+ FGEGWHNNHHAFEYSA++GLEWWQ+DFGWY
Sbjct: 160 MVNSVCHKWGKKQWSTTDLSRNNWWVSLLSFGEGWHNNHHAFEYSAKYGLEWWQLDFGWY 219

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           VIMFL+AIGVAT+VK+P+Q HKQ M +
Sbjct: 220 VIMFLKAIGVATDVKLPTQCHKQRMKL 246

[Close]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot
Match: Q949X0 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-32
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNS CH WG + W   DLS+NNW +  + FGEGWHNNHHAFE+SA+ GLEWWQ+D  WY
Sbjct: 282 LVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWY 341

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITN 90
           V+ FLQAIG+AT+VK+PS+  KQ MA T+
Sbjct: 342 VVKFLQAIGLATDVKLPSEAQKQRMAFTS 370

[Close]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot
Match: P0DOW2 (Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.5e-31
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNSVCH WG + W   DLS NNW I ++  GEGWHNNHHAFEYSA+ G+EWWQID  WY
Sbjct: 224 LVNSVCHRWGNRPWNTGDLSTNNWFIAMLTSGEGWHNNHHAFEYSARHGIEWWQIDTTWY 283

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITN 90
           +I  L+ +G+AT++KVPS+ HK+ M+  N
Sbjct: 284 IIKLLEYLGLATDIKVPSEIHKRKMSFKN 312

[Close]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot
Match: Q9LVZ3 (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 7.2e-30
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNSVCH WGT+ W   D S+NNW + ++  GEGWHNNHHAFE+SA+ GLEWWQ+D  W 
Sbjct: 274 LVNSVCHIWGTRAWNTSDFSKNNWWVAILTLGEGWHNNHHAFEFSARHGLEWWQLDITWC 333

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           +I FL+AIG+ATNVK+P++T  +  A+
Sbjct: 334 LIRFLEAIGLATNVKLPTETQMKGKAL 360

[Close]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot
Match: P0DOW3 (Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-29
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNSVCH +G + W   DLS NNW I ++  GEGWHNNHHAFEYSA+ G+EWWQID  WY
Sbjct: 221 LVNSVCHRYGHQAWDTGDLSTNNWFIAMLTSGEGWHNNHHAFEYSARHGIEWWQIDTTWY 280

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITN 90
           VI  L+ +G+AT+VKVPS+ HK+ M+  N
Sbjct: 281 VIKLLEYLGLATDVKVPSEVHKRKMSFKN 309

[Close]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot
Match: Q9SID2 (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=ADS2 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-29
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           ++NS+CH WGT+ WK +D SRN W + +  FGE WHNNHHAFE SA+ GLEWWQID  WY
Sbjct: 219 LINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWY 278

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           ++ F + IG+AT+VKVP++  ++ MAI
Sbjct: 279 IVRFFEIIGLATDVKVPTEAQRRRMAI 305

[Close]

BLAST of Sed0001967 vs. ExPASy TrEMBL
Match: A0A6J1E0E4 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111024778 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG + WKN DLSRNN  +GL+GFGEGWHNNHHAFEYSA+FGLEWWQIDFGWY
Sbjct: 225 MVNSVCHIWGKQPWKNGDLSRNNGWVGLLGFGEGWHNNHHAFEYSARFGLEWWQIDFGWY 284

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITNQ 91
           VI  LQAIGVATNVKVPSQ+HKQ +  TNQ
Sbjct: 285 VIRLLQAIGVATNVKVPSQSHKQRLGTTNQ 314

[Close]

BLAST of Sed0001967 vs. ExPASy TrEMBL
Match: A0A0A0KYG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006080 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.4e-36
Identity = 68/87 (78.16%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 1  MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
          MVNSVCH WG + WK +DLS NNWL+GL+GFGEGWHNNHHAFEYSA+ GLEWW+IDFGWY
Sbjct: 1  MVNSVCHIWGKQLWKTNDLSTNNWLVGLLGFGEGWHNNHHAFEYSARHGLEWWEIDFGWY 60

Query: 61 VIMFLQAIGVATNVKVPSQTHKQNMAI 88
          VIMFLQAIGVAT+VKVP Q HK+ +A+
Sbjct: 61 VIMFLQAIGVATHVKVPLQHHKKKLAM 87

[Close]

BLAST of Sed0001967 vs. ExPASy TrEMBL
Match: A0A0A0KTL6 (FA_desaturase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006100 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG KQW   DLSRNNW + L+ FGEGWHNNHHAFEYSA++GLEWWQ+DFGWY
Sbjct: 38  MVNSVCHKWGKKQWSTTDLSRNNWWVSLLSFGEGWHNNHHAFEYSAKYGLEWWQLDFGWY 97

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           VIMFL+AIGVAT+VK+P+Q HKQ M +
Sbjct: 98  VIMFLKAIGVATDVKLPTQCHKQRMKL 124

[Close]

BLAST of Sed0001967 vs. ExPASy TrEMBL
Match: A0A6J1DHZ7 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021091 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           M+NSVCH WG + W+  DLSRNNW + LV FGEGWHNNHHAFEYSA+ G+EWWQIDFGWY
Sbjct: 250 MINSVCHIWGKQPWRTGDLSRNNWWVSLVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWY 309

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           V+MFL+AIG+ATNVKVPSQ  KQ +AI
Sbjct: 310 VVMFLEAIGIATNVKVPSQNQKQKLAI 336

[Close]

BLAST of Sed0001967 vs. ExPASy TrEMBL
Match: A0A6J1DNZ3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022863 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           MVNSVCH WG KQW  DDLS+NNWL+ L+ FGEGWHNNHHAFEYSA+ GLEWWQID+GWY
Sbjct: 229 MVNSVCHMWGKKQWNTDDLSKNNWLVALLTFGEGWHNNHHAFEYSARHGLEWWQIDYGWY 288

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAIT 89
           +IM  QAIG+AT+VK PS+  KQ +AIT
Sbjct: 289 IIMLFQAIGLATDVKFPSEKQKQRLAIT 316

[Close]

BLAST of Sed0001967 vs. TAIR 10
Match: AT3G15850.1 (fatty acid desaturase 5 )

HSP 1 Score: 140.2 bits (352), Expect = 8.4e-34
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNS CH WG + W   DLS+NNW +  + FGEGWHNNHHAFE+SA+ GLEWWQ+D  WY
Sbjct: 282 LVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWY 341

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAITN 90
           V+ FLQAIG+AT+VK+PS+  KQ MA T+
Sbjct: 342 VVKFLQAIGLATDVKLPSEAQKQRMAFTS 370

[Close]

BLAST of Sed0001967 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein )

HSP 1 Score: 131.0 bits (328), Expect = 5.1e-31
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNSVCH WGT+ W   D S+NNW + ++  GEGWHNNHHAFE+SA+ GLEWWQ+D  W 
Sbjct: 274 LVNSVCHIWGTRAWNTSDFSKNNWWVAILTLGEGWHNNHHAFEFSARHGLEWWQLDITWC 333

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           +I FL+AIG+ATNVK+P++T  +  A+
Sbjct: 334 LIRFLEAIGLATNVKLPTETQMKGKAL 360

[Close]

BLAST of Sed0001967 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 )

HSP 1 Score: 129.0 bits (323), Expect = 1.9e-30
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           ++NS+CH WGT+ WK +D SRN W + +  FGE WHNNHHAFE SA+ GLEWWQID  WY
Sbjct: 219 LINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWY 278

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           ++ F + IG+AT+VKVP++  ++ MAI
Sbjct: 279 IVRFFEIIGLATDVKVPTEAQRRRMAI 305

[Close]

BLAST of Sed0001967 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 )

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-30
Identity = 49/87 (56.32%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           ++NS+CH WG++ WK +D SRN W + +  FGE WHNNHHAFE SA+ GLEWWQID  WY
Sbjct: 217 LINSLCHVWGSRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWY 276

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAI 88
           ++ FL+ IG+AT+VK+PS++ ++ MA+
Sbjct: 277 IVRFLEIIGLATDVKLPSESQRRRMAM 303

[Close]

BLAST of Sed0001967 vs. TAIR 10
Match: AT1G06360.1 (Fatty acid desaturase family protein )

HSP 1 Score: 123.6 bits (309), Expect = 8.2e-29
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 1   MVNSVCHTWGTKQWKNDDLSRNNWLIGLVGFGEGWHNNHHAFEYSAQFGLEWWQIDFGWY 60
           +VNS CH WG++ WK  D SRN W + L   GE WHNNHHAFE SA+ GLEWWQID  WY
Sbjct: 211 LVNSACHIWGSRSWKTKDTSRNVWWLSLFTMGESWHNNHHAFESSARQGLEWWQIDITWY 270

Query: 61  VIMFLQAIGVATNVKVPSQTHKQNMAIT 89
           +I   + +G+AT+VK+PS+  KQ +A+T
Sbjct: 271 LIRLFEVLGLATDVKLPSEIQKQKLALT 298

The following BLAST results are available for this feature:

BLAST of Sed0001967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158246.1	5.3e-38	81.11	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [M...	[more]
XP_038903307.1	4.5e-37	77.42	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [B...	[more]
XP_011652978.2	4.9e-36	78.16	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumi...	[more]
KGN52908.2	1.1e-35	75.86	hypothetical protein Csa_014723 [Cucumis sativus]	[more]
XP_031739648.1	1.1e-35	75.86	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic isoform...	[more]

BLAST of Sed0001967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949X0	1.2e-32	62.92	Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arab...	[more]
P0DOW2	8.5e-31	59.55	Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1	[more]
Q9LVZ3	7.2e-30	58.62	Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DOW3	1.2e-29	60.67	Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1	[more]
Q9SID2	2.7e-29	57.47	Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana OX=3702 GN=ADS2 PE=2 SV=...	[more]

BLAST of Sed0001967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0E4	2.6e-38	81.11	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A0A0KYG9	2.4e-36	78.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006080 PE=3 SV=1	[more]
A0A0A0KTL6	5.3e-36	75.86	FA_desaturase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0061...	[more]
A0A6J1DHZ7	1.2e-35	74.71	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1DNZ3	4.5e-35	73.86	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]

BLAST of Sed0001967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15850.1	8.4e-34	62.92	fatty acid desaturase 5	[more]
AT3G15870.1	5.1e-31	58.62	Fatty acid desaturase family protein	[more]
AT2G31360.1	1.9e-30	57.47	16:0delta9 desaturase 2	[more]
AT1G06080.1	2.5e-30	56.32	delta 9 desaturase 1	[more]
AT1G06360.1	8.2e-29	56.82	Fatty acid desaturase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11351:SF87	FATTY ACID DESATURASE, TYPE 1, CORE-RELATED	coord: 1..91
IPR015876	Acyl-CoA desaturase	PANTHER	PTHR11351	ACYL-COA DESATURASE	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001967.1	Sed0001967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009979	16:0 monogalactosyldiacylglycerol desaturase activity
molecular_function	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water