Sed0001949 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTTAGAGCTTATAATTTTCATTAATGATGGAAACGGAGGTGGTTGTCACGTGCGAATGCTGTGGCCTGAAAGAGGACTGCACCCAATCCTACATCACCGAAGTGAAGGCCAAGTTCGAAGGGAAATGGCTCTGTGGCCTTTGCTCCGAAGCTGTCAGAGACGAAGCTACCCGAAGCAACAACCCACTGCCAGGTTTGGACGAGGCTGTCAGTGCCCACATGTCGTTTTGCCGTAAATTCAGAGCCAACCCTGCGGTTCGTGTCGCTGACGGAATGAGGCTCCTGCTTCGGAGGAGATCCACCGACGTGTCGGCTTCTTCTTCTTCGCAGGCTCGGAACTTCGCTGCATCGTCCACCGCGTCGCAGGTGGGTTTCGACATGTCGTCGCTGTCCACCTTCTACTGATTTTTTTTTTTTAGAAATTTGGTTTGTTAATTAAGTATTGACCAATAATTAAAGTTTCGGC CCAAAATTTAGAGCTTATAATTTTCATTAATGATGGAAACGGAGGTGGTTGTCACGTGCGAATGCTGTGGCCTGAAAGAGGACTGCACCCAATCCTACATCACCGAAGTGAAGGCCAAGTTCGAAGGGAAATGGCTCTGTGGCCTTTGCTCCGAAGCTGTCAGAGACGAAGCTACCCGAAGCAACAACCCACTGCCAGGTTTGGACGAGGCTGTCAGTGCCCACATGTCGTTTTGCCGTAAATTCAGAGCCAACCCTGCGGTTCGTGTCGCTGACGGAATGAGGCTCCTGCTTCGGAGGAGATCCACCGACGTGTCGGCTTCTTCTTCTTCGCAGGCTCGGAACTTCGCTGCATCGTCCACCGCGTCGCAGGTGGGTTTCGACATGTCGTCGCTGTCCACCTTCTACTGATTTTTTTTTTTTAGAAATTTGGTTTGTTAATTAAGTATTGACCAATAATTAAAGTTTCGGC ATGATGGAAACGGAGGTGGTTGTCACGTGCGAATGCTGTGGCCTGAAAGAGGACTGCACCCAATCCTACATCACCGAAGTGAAGGCCAAGTTCGAAGGGAAATGGCTCTGTGGCCTTTGCTCCGAAGCTGTCAGAGACGAAGCTACCCGAAGCAACAACCCACTGCCAGGTTTGGACGAGGCTGTCAGTGCCCACATGTCGTTTTGCCGTAAATTCAGAGCCAACCCTGCGGTTCGTGTCGCTGACGGAATGAGGCTCCTGCTTCGGAGGAGATCCACCGACGTGTCGGCTTCTTCTTCTTCGCAGGCTCGGAACTTCGCTGCATCGTCCACCGCGTCGCAGGTGGGTTTCGACATGTCGTCGCTGTCCACCTTCTACTGA MMETEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSSSQARNFAASSTASQVGFDMSSLSTFY Homology
BLAST of Sed0001949 vs. NCBI nr
Match: XP_022934401.1 (uncharacterized protein LOC111441587 [Cucurbita moschata]) HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Sed0001949 vs. NCBI nr
Match: XP_023540731.1 (uncharacterized protein LOC111801010 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Sed0001949 vs. NCBI nr
Match: XP_022974390.1 (uncharacterized protein LOC111473071 [Cucurbita maxima] >XP_022975121.1 uncharacterized protein LOC111474099 [Cucurbita maxima]) HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Sed0001949 vs. NCBI nr
Match: XP_022980009.1 (uncharacterized protein LOC111479543 [Cucurbita maxima] >XP_023527200.1 uncharacterized protein LOC111790510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45 Identity = 96/123 (78.05%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of Sed0001949 vs. NCBI nr
Match: XP_022955973.1 (uncharacterized protein LOC111457807 [Cucurbita moschata] >KAG6582305.1 hypothetical protein SDJN03_22307, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45 Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Sed0001949 vs. ExPASy TrEMBL
Match: A0A6J1F1Q0 (uncharacterized protein LOC111441587 OS=Cucurbita moschata OX=3662 GN=LOC111441587 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.9e-46 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Sed0001949 vs. ExPASy TrEMBL
Match: A0A6J1IDB2 (uncharacterized protein LOC111473071 OS=Cucurbita maxima OX=3661 GN=LOC111474099 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 7.7e-46 Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of Sed0001949 vs. ExPASy TrEMBL
Match: A0A6J1IY61 (uncharacterized protein LOC111479543 OS=Cucurbita maxima OX=3661 GN=LOC111479543 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45 Identity = 96/123 (78.05%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of Sed0001949 vs. ExPASy TrEMBL
Match: A0A6J1GVH2 (uncharacterized protein LOC111457807 OS=Cucurbita moschata OX=3662 GN=LOC111457807 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45 Identity = 96/124 (77.42%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Sed0001949 vs. ExPASy TrEMBL
Match: A0A5A7U0I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00510 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 6.5e-45 Identity = 98/128 (76.56%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of Sed0001949 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 126.7 bits (317), Expect = 1.3e-29 Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 0
BLAST of Sed0001949 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 124.4 bits (311), Expect = 6.5e-29 Identity = 65/105 (61.90%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Sed0001949 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Sed0001949 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Sed0001949 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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