Sed0001911 (gene) Chayote v1

Overview


Name	Sed0001911
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin responsive SAUR protein
Location	LG13: 20993313 .. 20994188 (+)
RNA-Seq Expression	Sed0001911
Synteny	Sed0001911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCGGTGGCGCAACAAGGCCAGAATCTCCGCCAACCGCATCCCCTCCGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCGGTGGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTTCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCAATCCCTTGCGACGAGTCGGTTTTCGAAGATGTGATCCGGTTCATCTCCAGATCGGAGTCGTCCAACTCGGGGCGGTTTATGAAACTGGACGATTTTCAGAGCTACTGCCACGCTGGCATCAGAACCGGGCTTGATTTATGGCCGGAATCTCGGCCGTTGCTTCATGGGTTGGCCGAGAAATCAATTTGGTAATAATGTAGGGTGTTTTTTGTAAATTCGTCTGAATTTGGCAGCAACTTTGCAGAAAAAAAAAAGTGGAGAAACGAGTCAAAGATCCAGATTTGACTCAGTTGAGTTACCCGAGATGAAAATTTAAAATCCAATTTGGGTTTTTCTATTCCTTTTTTGCCCTCCAATCCTACTTGCTACAAATAGGAAAAAAAAAAAATAGCAAGAGAATTAAGGAAGGTTTTTTTTTTGCCCTTTTTCTAAAACCATTGTGGTTATTGAGAATGCTTATGGAGATGGCAAAATTGGTGGAGGGAGGATCCCACCGTCGTCGTCCCGAGCCCGAACCCGAGTCGGGGCGAACCGAAACCGAAGAAGGAAGAAGAACAGTTAACAACTACAGCAAGTGTTGCTAATTCGGTTAGAGGAGTACTTTGTGTAAATTAA

mRNA sequence

ATGTCAACCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCGGTGGCGCAACAAGGCCAGAATCTCCGCCAACCGCATCCCCTCCGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCGGTGGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTTCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCAATCCCTTGCGACGAGTCGGTTTTCGAAGATGTGATCCGGTTCATCTCCAGATCGGAGTCGTCCAACTCGGGGCGGTTTATGAAACTGGACGATTTTCAGAGCTACTGCCACGCTGGCATCAGAACCGGGCTTGATTTATGGCCGGAATCTCGGCCGTTGCTTCATGGGTTGGCCGAGAAATCAATTTGGGAGGATCCCACCGTCGTCGTCCCGAGCCCGAACCCGAGTCGGGGCGAACCGAAACCGAAGAAGGAAGAAGAACAGTTAACAACTACAGCAAGTGTTGCTAATTCGGTTAGAGGAGTACTTTGTGTAAATTAA

Coding sequence (CDS)

ATGTCAACCGGAATCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGGCAAATGCTCCGGCGGTGGCGCAACAAGGCCAGAATCTCCGCCAACCGCATCCCCTCCGACGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAACCGGTGGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTTCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCAATCCCTTGCGACGAGTCGGTTTTCGAAGATGTGATCCGGTTCATCTCCAGATCGGAGTCGTCCAACTCGGGGCGGTTTATGAAACTGGACGATTTTCAGAGCTACTGCCACGCTGGCATCAGAACCGGGCTTGATTTATGGCCGGAATCTCGGCCGTTGCTTCATGGGTTGGCCGAGAAATCAATTTGGGAGGATCCCACCGTCGTCGTCCCGAGCCCGAACCCGAGTCGGGGCGAACCGAAACCGAAGAAGGAAGAAGAACAGTTAACAACTACAGCAAGTGTTGCTAATTCGGTTAGAGGAGTACTTTGTGTAAATTAA

Protein sequence

MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQSYCHAGIRTGLDLWPESRPLLHGLAEKSIWEDPTVVVPSPNPSRGEPKPKKEEEQLTTTASVANSVRGVLCVN

Homology

[Close]

BLAST of Sed0001911 vs. NCBI nr
Match: KGN60020.1 (hypothetical protein Csa_001829 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 151/188 (80.32%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSI--------WEDPTV-----VVPSPNPSRGEP 176
           SYCH GIRTGLDLWPESRPLLHGLAEKSI        W+         VVPS N SRG  
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQKLVEGSIHHVVPSSNRSRGGT 180

[Close]

BLAST of Sed0001911 vs. NCBI nr
Match: XP_011652445.1 (auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 3.2e-77
Identity = 141/150 (94.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           SYCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. NCBI nr
Match: XP_008466498.1 (PREDICTED: auxin-induced protein 6B [Cucumis melo] >KAA0063271.1 auxin-induced protein 6B [Cucumis melo var. makuwa] >TYK31503.1 auxin-induced protein 6B [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 4.1e-77
Identity = 140/150 (93.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           SYCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. NCBI nr
Match: XP_038899268.1 (auxin-induced protein 6B-like [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-76
Identity = 139/150 (92.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHP+FKKLLVQAEEEYGFTNQGPLAIPC+ESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPIFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           SYCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. NCBI nr
Match: XP_023535898.1 (auxin-induced protein 6B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 7.8e-76
Identity = 138/150 (92.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGVGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRS+S NSGRF+KLD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 7   KCSKIRHIVRLRQMLRRW-----RNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRATY 66
           K SK+     L+Q+L+R      +N      + +P DVP GH  V VG    R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFI 103
           L HP F+ LL +AEEE+GF +   L IPCDE VF+ +   I
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 35  IPSDVPAGHVAVCVGTGGRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+T +G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEDVI 100
           FE V+
Sbjct: 104 FEQVV 108

[Close]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  KARISANRIPS---DVPAGHVAVCVGTGGRRFVVRATYLNHPVFKKLLVQAEEEYGFTN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  QGPLAIPCDESVFEDVIRFIS 104
            G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 20  MLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRATYLNHPVFKKLLVQAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FTNQGPLAIPCDESVFEDVI 100
           +  QG L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 39  VPAGHVAVCVGTGGRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDV 98
           VPAGHV V VG    RFVV A  +NHP+F  LL ++ +EYG+  +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 99  IRFISRSESSNSGRFMKLDDFQSYCHAGIRTGLDLWPES 138
           +      E+   G F    D ++   A + +G +L PE+
Sbjct: 114 V------ETLRLGGFEGSGDLENLV-ASLLSGDELIPET 145

[Close]

BLAST of Sed0001911 vs. ExPASy TrEMBL
Match: A0A0A0LDJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.3e-78
Identity = 151/188 (80.32%), Postives = 161/188 (85.64%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSI--------WEDPTV-----VVPSPNPSRGEP 176
           SYCH GIRTGLDLWPESRPLLHGLAEKSI        W+         VVPS N SRG  
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQKLVEGSIHHVVPSSNRSRGGT 180

[Close]

BLAST of Sed0001911 vs. ExPASy TrEMBL
Match: A0A5D3E601 (Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008210 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 140/150 (93.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           SYCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. ExPASy TrEMBL
Match: A0A1S3CRK3 (auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 140/150 (93.33%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES NSGRF+KLDDFQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           SYCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. ExPASy TrEMBL
Match: A0A6J1F8H9 (auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.9e-76
Identity = 138/150 (92.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G+GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRS+S NSGRF+KLD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. ExPASy TrEMBL
Match: A0A6J1C879 (auxin-induced protein 6B-like OS=Momordica charantia OX=3673 GN=LOC111009266 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.4e-75
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTGGRRFVVRAT 60
           MS G GKCSKIRHIVRLRQMLRRWRNKAR+SANRIPSDVPAGHVAVCVGT  RRFVVRAT
Sbjct: 1   MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDDFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFE+VIRFISRSES+NSGRF  LDDFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQ 120

Query: 121 SYCHAGIRTGLDLWPESRPLLHGLAEKSIW 151
            YCH GIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 RYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of Sed0001911 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 224.9 bits (572), Expect = 5.4e-59
Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISAN---RIPSDVPAGHVAVCVGTGGRRFVV 60
           M+ G+GKCSKIRHIVRLRQMLRRWR++AR+S++    +PSDVP+GHVAV VG+  RRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLD 120
           RATYLNHPV + LLVQAEEE+GF NQGPL IPC+ESVFE+ IRFISRS+S+ S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DFQSYCH-AGIRTGLDLWPESRPLLHGLAEKSIW 151
           DFQ  CH  GIR+ LDLW ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of Sed0001911 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-56
Identity = 108/154 (70.13%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARIS--ANRIPSDVPAGHVAVCVGTGGRRFVVR 60
           M+  + KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+G RRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDD 120
           A+YLNHP+   LLVQAEEE+GF NQGPL IPC+ESVFE+ IRFISRS+SS S RF   DD
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 FQSYCHAG--IRTGLDLWPESRPLLHGLAEKSIW 151
            Q  C+ G  I++ LDL  ESRPLLHG+AEK+IW
Sbjct: 121 LQK-CNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of Sed0001911 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-51
Identity = 101/151 (66.89%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MSTGIGKCSKIRHIVRLRQMLRRWRNKARISANR--IPSDVPAGHVAVCVGTGGRRFVVR 60
           M+ GIGKCSKIRHIV+LRQMLR+WRNKAR+S+ R  +PSDVP+GHVAV VG   RRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSESSNSGRFMKLDD 120
           ATYLNHP+   LLV+AEEE+GF NQGPL IPC+ESVFE+ IRFI+R     S RF   DD
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 FQSYCHAGIRTGLDLWPESRPLLHGLAEKSI 150
            +   H GIR+ LDL  ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of Sed0001911 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 5   IGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTGGRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG   RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSE-SSNSGR----FMKLD 124
           NHP+F++LL +AEEEYGF N GPLAIPCDES+FED+I  ++R E SS+SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DFQSYCHAGIRTGLDLWPESRPLLHGLAEKSI 150
           D +   H G+        ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

[Close]

BLAST of Sed0001911 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 5   IGKCSKIRHIVRLRQMLRRWRNKARI-SANRIP-SDVPAGHVAVCVGTGGRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA I S+N  P SDVP GHVAV VG   RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEDVIRFISRSE-SSNSGR----FMKLD 124
           NHP+F++LL +AEEEYGF N GPLAIPCDES+FED+I  ++R E SS+SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DFQSYCHAGIRTGLDLWPESRPLLHGLAEKSI 150
           D +   H G+        ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of Sed0001911 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60020.1	1.1e-77	80.32	hypothetical protein Csa_001829 [Cucumis sativus]	[more]
XP_011652445.1	3.2e-77	94.00	auxin-induced protein 6B [Cucumis sativus]	[more]
XP_008466498.1	4.1e-77	93.33	PREDICTED: auxin-induced protein 6B [Cucumis melo] >KAA0063271.1 auxin-induced p...	[more]
XP_038899268.1	2.7e-76	92.67	auxin-induced protein 6B-like [Benincasa hispida]	[more]
XP_023535898.1	7.8e-76	92.00	auxin-induced protein 6B [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0001911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	5.7e-13	39.60	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
O64538	2.2e-12	53.85	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
P33083	6.3e-12	48.15	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SGU2	6.3e-12	47.50	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SA49	2.4e-11	41.41	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]

BLAST of Sed0001911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDJ7	5.3e-78	80.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1	[more]
A0A5D3E601	2.0e-77	93.33	Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRK3	2.0e-77	93.33	auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1	[more]
A0A6J1F8H9	4.9e-76	92.00	auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1	[more]
A0A6J1C879	1.4e-75	92.67	auxin-induced protein 6B-like OS=Momordica charantia OX=3673 GN=LOC111009266 PE=...	[more]

BLAST of Sed0001911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	5.4e-59	70.78	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	1.9e-56	70.13	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	1.9e-51	66.89	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	1.4e-38	55.92	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	1.4e-38	55.92	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 e-value: 1.1E-29 score: 102.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..179
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..144
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001911.1	Sed0001911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin