Sed0001837 (gene) Chayote v1

Overview


Name	Sed0001837
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Location	LG11: 19195045 .. 19198728 (+)
RNA-Seq Expression	Sed0001837
Synteny	Sed0001837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAGAGGGCAAAGGCTCCGCAACTTGTCCCTCAAGATATCTCAGTTCATTTGTTCAGTAGAAATCAAACAACACAAGACTCGTTCGTCTTACAATCTTTCTCAAACTCTCCTCTCTCTCAAGGTTCTTCAACCCCTTTTTCTCACCATTCCTTTATCTGCCTTCAATTTAGGTAGCCTATCTCTCTCGGTTATGCTTTACGATTTCTCTTGTGAATTATGATGCATTTCATTTGATGCTTTGCTTTATAATTTCTCCTGAGTTCTTATGTTCTATTTCTCTCTTCGCTCCTTTACTTCTGTACGGAAAATTCATGACTATGCTATGGGGGTGTTTGTTTGACATATTTTGGTAGTTTTTGAGTTAAAGAGTTATATTGAGGAGTTATATTTAGTAGTTAAAATTTGAGAGTTGTGTCAAAAAATAGTTTGGATGTCATTTTTTTTGTAGAGGAGTTAGAGTCAAAATCTTGTTTGGATGTAGATTTAAAAATAAGTAGTTATTTTTAGTACTTAAAAAAGAAATGATTAAAAGTAAATAGTTAAAAATGAGTTATTTTGATTGATTTAAAAAGAATGATTAAAAATAAGTAGTTATAAATGATTGAGTAGTTATAAATGAATGATTAAAAATGATGGTTAGAAATGAGAGTTATTTTTAAAAATAAAAATGATGAGGAGTTAATAAAAATTTGTTTGGATGTAGGTTTTCGACAAAAAATTAATAAAACCTAAAAATAACTCCTACCTAAATATGTCAAACAAACCGTGAGTGCTAAAAAATGCTCAATAAATAATATATAGGGAGAGTTTAAAAAACCAGCGTAAAATTTATGTGACCCAATTTTAATATTTTCGGATTGGATTGGTGTGGCAAGTTGGTTATTAAACAATCAGCTAAATTGTTTTGATTGGGTGACTTTAGTGAGTCTAGTAAATGTTTCACTGCAAAAGCCACCTTCAAATGTGTATTTCTCAGTATTTCAAATTTGTTGCTGATTCTCCAGAATACTCGAGATTTGTAGAACAGTGTTAGCTTTATTATGGCAACTGAACTGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTAAAGAGTTTGAGATTAATGAAGGTATAACGTGTAATTATTTGTCTTTTTATTCCTTCTTTTATTTGGTATCCCTCACCATTGTTTTCAATTTTCTCCAATATTTCATTTATCAATACTTGTCTTTCAAAAAATTTCTTTGTTTCATGCTTGAGCCAAAAGAATGTGAATGTTACATACAGGTCTAGATAATCCTGTTATGGACTCACTCAATCCTAACTGCTAGCATTCTTTATTTGAATGCCCTATTATTACTGTTGTCTTGTTCACTCACTATTACATAGTACATTCTAGGAATCCTGTGTTCGAAAAGAATGAGCTAGAATGCTTGTAAAATCAATTTCTATAGTAACAATCAATGAAACAGAAGTATTGATTAGGACAAAAAGAGTTTGAATAATGCATGGCTTTTAAAAGATTGCGTGTTACCCTTGTTTAAAAAAAAAAGGCTGACCCCTTAAGTAGTACTATGTACGGATGGGGATTTCTTTTTCTCTTTAAGATATCAAAATCCTCAAGATGTTTGTTTTAAGATAATATAATTACTTATAAAAACAATTTCCTTTTGTAACTGTGATGGTCTTGACCGTGCAGCTCGATTATTTTCATTGGATACCCGCTTGACCCTCAATATTTGGTTGTCAAAAAAATTCATAGAAAATTAGTTCCTAGGTACTTGGTCACCTTGAATTGAACTTAAAAACTTTTAGTTCCTCAAGATCCTCATGATCACTAGGCCTACTCATGATAGTTACTTATAAAATGAATTCTTTTCCCGGAAGAAAAACAAAGTTTGTTGGGAGGTTAAATTCTTTTGTGATGCACTGATGTTATATATTCCTTGTTTGCTCAAAGCCTCGAAACGCGAAAGAACTAGGAGTGGTACATAAGGAAGTTGGTGGAATAGCTTTTGAACGGAGTTTGTGGTTGCTTTATCTTTTCTTTTTTTGAAACATGGTTGCTTTCTGAATAATCTACGGTTTTTGCTTTGATTCCTGAAATGGACTAGGCAGAATAAACTTTTTTCAATTTTATATTATCAAAAAAAAAAAAAAAAAATTGATGACCCAAAACCACTTCTCTTTGTTTAGTGTAACTGAGGGCTTTTCTTTATCTCTTAGAAGGGGGTTACGGTTGCTGATTCTTGTGAAGAAATAAAGAATTTTAAGTCTTATCATTCAAGACCACATGCATGGTTGCTTGACTATGTTGTTGACTGAAACTATCCTTCGTATCCCTTGAAGTCTTGCATATCCTTAAAAAAGGGAAGAAAAAAAAAATTGTCCAAGTACCTTCTTTTTTGGAACCATCATGGAGTGGCTCAAGTGGTCAAAAGAGGGCCTTGAGGTACTTAAGGTGATGAGTTCAATTCATTGTGACCACCTATCTAAGGATTAATTTTCTACTAGTTTCTTTGACATCCAAATATTCTAGGGCCAAGCGGTATATCTCGTGATATTAGTCGAGGTGCACGCAAGTTGGCCTGGACAGTCATGGATAAATAAACTTACCTTCTTTTTTTGGATAATCAAGAGTGTCTGGTCTTGCATAAGTGCACTTCACCAATCTCATGCTCTGCACCATAACTAATTTCATTTTATAACGGATTGACCCTGACCAATCTCACTCATACTTCAGTGACCATAACTAATTCCTTAAACAACTGCTTGATCTCAATCTCATAAGGTTATAATTTGTGGCTGTCAAGGAGTTCATAATATTTTATTCTATGTAGATGACCACCTTGAGATTTTGAACACATTCCTCCCAAGTCTTTACTTTTTTTTTTCTCATACACGATTGCCACTAGGGAAACCCAAAGTGGTTCTTGTTTGAGAGCATATGAGAGGTCGAAATTTGTAATGTATATCATAGTTCTAGTCGTAGCCCGATATTACTAGTAAGCGGAGAATTAATAGATCTCAATACTCTGTTTCCTGTTCTTGGCATTACATCTTTTTGGTAAAAGTTTCGAAGTTCTTTTGTTCTTGGCAATTGGCATAACATCTTTTTGCTAAAAATTTCAAAGTTCTTTTGCTGACGTTGCTTCTGTTTTGATTGGTAAAATCCATTAACAGAGTGGGAAGTGAAGGAAGGTAAGGAAATTACTCAACAATGGGAAGATGAATGGGATGATGATGATGTCAACGACGACTTCTCGTTGCAGCTTAAGAAAGAACTGGAGAACAATGCCGAAAAAAAATGAAGAGACCCTAGGCACCTCTTTTTTAGTTTTAATGTTGATGGCTTTGTTATGTCTTATATCTCTGCAAATTGTGTAATGAATATGCTCAGAAGTTCGAAACATTGTTGGCATTTAAGATCAGCTATTGAACACCTATGATCATTGGCACGGAAGACAAGGCAATTGGTTAATTTCATGGTAGTCTTTCCTTTCTGTATATTGTGCGCTACTTGTAAGGTTTATCGAGTTATATTATAATATAGGCATTGTTAAAAAAAAGAAAAAAAAAATAGTCACACTCAAATACTGATCGATAGCCTTGTCAACTTCTTAGAAGAGCAAAGCTTGTCAAACTTCTTAAAAGGTACTTTATTCTTACTTTCCAC

mRNA sequence

AAAGAAAAGAGGGCAAAGGCTCCGCAACTTGTCCCTCAAGATATCTCAGTTCATTTGTTCAGTAGAAATCAAACAACACAAGACTCGTTCGTCTTACAATCTTTCTCAAACTCTCCTCTCTCTCAAGGTTCTTCAACCCCTTTTTCTCACCATTCCTTTATCTGCCTTCAATTTAGAATACTCGAGATTTGTAGAACAGTGTTAGCTTTATTATGGCAACTGAACTGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTAAAGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGGTAAGGAAATTACTCAACAATGGGAAGATGAATGGGATGATGATGATGTCAACGACGACTTCTCGTTGCAGCTTAAGAAAGAACTGGAGAACAATGCCGAAAAAAAATGAAGAGACCCTAGGCACCTCTTTTTTAGTTTTAATGTTGATGGCTTTGTTATGTCTTATATCTCTGCAAATTGTGTAATGAATATGCTCAGAAGTTCGAAACATTGTTGGCATTTAAGATCAGCTATTGAACACCTATGATCATTGGCACGGAAGACAAGGCAATTGGTTAATTTCATGGTAGTCTTTCCTTTCTGTATATTGTGCGCTACTTGTAAGGTTTATCGAGTTATATTATAATATAGGCATTGTTAAAAAAAAGAAAAAAAAAATAGTCACACTCAAATACTGATCGATAGCCTTGTCAACTTCTTAGAAGAGCAAAGCTTGTCAAACTTCTTAAAAGGTACTTTATTCTTACTTTCCAC

Coding sequence (CDS)

ATGGCAACTGAACTGAAAGCAGCTACTGAGGAAGTGAAAGTTGACCTCTTTGAGGATGATGATGAGTTTAAAGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGGTAAGGAAATTACTCAACAATGGGAAGATGAATGGGATGATGATGATGTCAACGACGACTTCTCGTTGCAGCTTAAGAAAGAACTGGAGAACAATGCCGAAAAAAAATGA

Protein sequence

MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQLKKELENNAEKK

Homology

[Close]

BLAST of Sed0001837 vs. NCBI nr
Match: XP_004144232.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED: protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucumis melo] >KGN47541.1 hypothetical protein Csa_019014 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKAA+EEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of Sed0001837 vs. NCBI nr
Match: XP_023546762.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 5.5e-27
Identity = 67/72 (93.06%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKAATEEVKVDLFEDDDEF+EFEI+EEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATELKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELE+NAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]

BLAST of Sed0001837 vs. NCBI nr
Match: XP_022999790.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima])

HSP 1 Score: 130.2 bits (326), Expect = 7.2e-27
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATE+KAATEEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELE+N EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]

BLAST of Sed0001837 vs. NCBI nr
Match: KAG6599102.1 (Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.3 bits (321), Expect = 2.8e-26
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATE KAATEEVKVDLFEDDDEF+EFEI+EEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELE+NAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]

BLAST of Sed0001837 vs. NCBI nr
Match: XP_022153100.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia] >XP_022153101.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26
Identity = 64/72 (88.89%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKA TEE+KVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFS+Q
Sbjct: 1  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQ 60

Query: 61 LKKELENNAEKK 73
          L++ELENN EKK
Sbjct: 61 LRRELENNGEKK 72

[Close]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEW-EVKEGKEITQQWEDEWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEF+EFEINE+W E +E KE++ QWED+WDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKKELENNAEKK 73
          QLKKELEN +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.8e-20
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATELKAATEE-VKVDLFEDDDEFKEFEINEEW-EVKEGKEITQQWEDEWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEF+EFEINE+W E +E KE++QQWED+WDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKKELENNAEKK 73
           QL+KELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.8e-05
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 10 EEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQLKKELENNA 69
          + V + L E+DDEF+EF   E+W   +  E    WED WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.8e-05
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 10 EEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQLKKELENNA 69
          + V + L E+DDEF+EF   E+W   +  E    WED WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot
Match: P60897 (26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.8e-05
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 10 EEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQLKKELENNA 69
          + V + L E+DDEF+EF   E+W   +  E    WED WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]

BLAST of Sed0001837 vs. ExPASy TrEMBL
Match: A0A0A0KIG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28
Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKAA+EEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of Sed0001837 vs. ExPASy TrEMBL
Match: A0A1S3CMK4 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC103502626 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28
Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKAA+EEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]

BLAST of Sed0001837 vs. ExPASy TrEMBL
Match: A0A6J1KGK6 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111494033 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.5e-27
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATE+KAATEEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELE+N EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]

BLAST of Sed0001837 vs. ExPASy TrEMBL
Match: A0A6J1DJN7 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Momordica charantia OX=3673 GN=LOC111020683 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 64/72 (88.89%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATELKA TEE+KVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFS+Q
Sbjct: 1  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQ 60

Query: 61 LKKELENNAEKK 73
          L++ELENN EKK
Sbjct: 61 LRRELENNGEKK 72

[Close]

BLAST of Sed0001837 vs. ExPASy TrEMBL
Match: A0A6J1KMT1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC111496037 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-26
Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEWEVKEGKEITQQWEDEWDDDDVNDDFSLQ 60
          MATE KA TEEVKVDLFEDDDEF+EFEINEEWEVKEGKEITQQWED+WDDDDVNDDFSLQ
Sbjct: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKKELENNAEKK 73
          LK+ELE+NAE+K
Sbjct: 61 LKRELEDNAERK 72

[Close]

BLAST of Sed0001837 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 100.1 bits (248), Expect = 7.5e-22
Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MATELKAATEEVKVDLFEDDDEFKEFEINEEW-EVKEGKEITQQWEDEWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEF+EFEINE+W E +E KE++ QWED+WDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKKELENNAEKK 73
          QLKKELEN +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]

BLAST of Sed0001837 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATELKAATEE-VKVDLFEDDDEFKEFEINEEW-EVKEGKEITQQWEDEWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEF+EFEINE+W E +E KE++QQWED+WDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKKELENNAEKK 73
           QL+KELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of Sed0001837 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MATELKAATEE-VKVDLFEDDDEFKEFEINEEW-EVKEGKEITQQWEDEWDDDDVNDDFS 60
          MA E KAAT E VK+DLFEDDDEF+EFEINE+W E +E KE++QQWED+WDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKKELENNAEKK 73
           QL+KELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]

BLAST of Sed0001837 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 55/115 (47.83%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MATELKAATEE-VKVDLFEDDDEFKEFEINE----------------------------- 60
           MA E KAAT E VK+DLFEDDDEF+EFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EW-EVKEGKEITQQWEDEWDDDDVNDDFSLQLKKELENNAEKK 73
                       +W E +E KE++QQWED+WDDDDVNDDFS QL+KELEN  +KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:

BLAST of Sed0001837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144232.1	1.1e-27	94.44	protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED...	[more]
XP_023546762.1	5.5e-27	93.06	protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_022999790.1	7.2e-27	91.67	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]	[more]
KAG6599102.1	2.8e-26	91.67	Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022153100.1	3.6e-26	88.89	protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia] >XP_022153101.1 ...	[more]

BLAST of Sed0001837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL96	1.1e-20	75.34	Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ...	[more]
Q9XIR8	1.8e-20	74.32	Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1...	[more]
Q3ZBR6	2.8e-05	48.39	26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1	[more]
P60896	2.8e-05	48.39	26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1	[more]
P60897	2.8e-05	48.39	26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1	[more]

BLAST of Sed0001837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIG9	5.4e-28	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1	[more]
A0A1S3CMK4	5.4e-28	94.44	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC10350262...	[more]
A0A6J1KGK6	3.5e-27	91.67	protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DJN7	1.7e-26	88.89	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1KMT1	3.0e-26	90.28	protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Sed0001837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45010.1	7.5e-22	75.34	DSS1 homolog on chromosome V	[more]
AT1G64750.1	1.3e-21	74.32	deletion of SUV3 suppressor 1(I)	[more]
AT1G64750.2	1.3e-21	74.32	deletion of SUV3 suppressor 1(I)	[more]
AT1G64750.3	1.4e-15	47.83	deletion of SUV3 suppressor 1(I)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..72
None	No IPR available	PANTHER	PTHR16771:SF8	OS01G0316800 PROTEIN	coord: 1..72
IPR007834	DSS1/SEM1	SMART	SM01385	DSS1_SEM1_2	coord: 9..67 e-value: 2.6E-17 score: 73.5
IPR007834	DSS1/SEM1	PFAM	PF05160	DSS1_SEM1	coord: 10..66 e-value: 1.1E-15 score: 57.5
IPR007834	DSS1/SEM1	PANTHER	PTHR16771	26 PROTEASOME COMPLEX SUBUNIT DSS1	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001837.1	Sed0001837.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex