Sed0001822 (gene) Chayote v1

Overview


Name	Sed0001822
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SNARE associated Golgi protein family
Location	LG10: 34602249 .. 34606112 (-)
RNA-Seq Expression	Sed0001822
Synteny	Sed0001822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAAATTTTGATTCGTTCACCGTCTTCCTCAATTACTCTCCCCAAGATCACAAGGTTTCGAATACAAATTTCTCATCATTCCCCTGTTTTCTAAGTTTCTCAGATTCCCCAATTTCTCAAATTTTGACACAAACCCAGATTTTCATATACGATTCTCTCAAATCCCCAACAACATAGCCAACACCCAGATCTCCCTTCACTATTTCTCTTACTAATCAAGCTGTTGACCTCAATTTGACGTTTGAATAACCCGCAAACGTCGAATCAGTGTTCTTGAGCTACTTTCTTGAAAACCCTTTTGAAATTTTGGGGGAAATCTTGAGTTCGATCTGTTAATGGCGCCATTGAGGAATGTGGCGGTGAGGGATGAGGAGAAGCTGAAGGAAGAAGACGACTCCCCAACGGCTAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAATGGGAGCTGGCTGTGGCTATTGCTATATTCTTTGTGTGCTCTACTGGCCTTGTGTGTGTGTACTTGACGATGCCTTCTGCAGAATATCAGAGCGTTAAGCTCCCAAGGACCCTTTCGGATCTTCGAGTTCTCAAGTATGTTTGATTCTGTTCTTACCCTTTTCGTTTTGGAGGAGATGTTATGATCTTTTATTGCCTAATTCTATTTGGGGTTTGTGAAATGTTTGTTAATGTGATGTGAAATCGGAAGGAGTATTATGGATTGAGGTTTGTGGGGTGGAGATTTTGTGATGAAGTTGCTTTTAAGCGTTGATGGAAATTGGTTTTGAAACTATTATGGGGATACTGAGTGTGGGATTGAGGTTGGTGTTGAAATGCCTTGAACAAGGTTGCTCCCTGGTTACTTAGTAGTCGGGTCTCACTATCTAGTTAGCGAATGGGGATCTGATTATTAATAACAGATGTAATTAGGTTTATACTTTCGTATTGGATTTTGGACTTTTATGTATTCTAGGTCGTATGTTGTATACTTGTATTATGGTTTTATGAGAGGTGTCTGCACTATATAAACTCGACCCCAAATGTTGTTGTAGAACTAAAAAAAAGAATGTGCGAAAAGTATGGTTAAAAGATTAAACACACAATAACCTATCAACTTGAAGGGTTAGTTTTGGCAGTAGTTGTTTAAACATAGTATCAAAGTTTGAAATCCTTCAATTGAATCCATGTAATGTCATTTCCTACTAAAGGATATTAATGAACACTTGTTGAGTTTTCTTCTAATTTTCAAGCTTTGAGGAGAGTGTTAAAAATATGTATAAAAGTAAAATATTAAGCTTGAGTTTAGTAGTTTAACAGATGTTCATGCTAACTACCGTTATCGGTCAGCATTTTGAGTTAGTTCCTCGGCTTTAGGATTCTTAATGCTCCATTTTTTGTCTCTTGATTTGTTTCTCTGTTTATTAATATTCCAGGAATCTCTTTGCAAGTTATGCCAAAGATCATCCAGCACAATTCATTCTAGGTTATTGCTCCACCTACATATTCATGCAAACTTTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGGCTTCTGTTAGTTGTCTTTAATGCAACAGCTGGTGCATCCTCATGCTTTTTTCTTTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAAATGTTCCAGGCCAAGGTATTTACTTGCTGTCAATTTTGTTCGAATTTGATCATATGAGAACCCTCTATTCACATCTAATGTTGCTTTGAACTCGTGGATTTTATGTATCCAGATTGCGAAGCATCGAGAAAAGCTGCTCAATTATATGCTTTTTCTGAGGATAACTCCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTCCATGTATTCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTATATCACAGTCAGGGTAAATTTCTATCATTGTTGATGTTGTGATTTGTTTTTCCTGTTTTCATTCTATCAAAAAGTAGCCTTTTCGCGCTTTCTTATTGTTTGCTGTTCCTCCCTGTTTGCTAATCAGTATAATTGAATCTCTCTTAACTCTCAAGTCAGCAGTACATATAGACAGACATAGATTCTTTCCATGTAAATATTGTTGTAGAGTACTTGAAATTTGATGCTTTTCCTTTTTATAACAAAAAGAAAGATAGAATACTAAAATTTGAGTTTCCCTTGAATGCAGTAGAGAATGGCTGTTGTGTCTGATGTCTTGGTTGACCTTATTTAATATAACTTGGTAATAGAGAGGCATGGCAACCATCGTGGGTAACCTAGTGATCCAAAGAGTTTTAAAAAACCAAAAAGTTATGACAATCCATTGTGGCCACCTACCTGTAATTAATTTTTTACGAGTTTTCTTAACATTCAAATGTTGTAGGGTCATAGTAAGCTCATTCGAACACTCACGGATATTAAAAAAAAATGGAGAGGCATGGCTCTTATCACATCTTGGATTGGCTGATGTGATGGTTGCTTGATTGAAGACTAAAATTTTTCACCTTTTCATTGACGTAGGAAATGAGAGCATTGTGTTTGTTTTTTTATGTACACTCTTAATTTTTTGCTCATTTCTTTTTCTTCCCTCTACAAGCAACATATTTGGTTGGAATTTGCCTGGCTTCGGCTACTTATTTAGATTGTCTTGGCTCTTTATCAACTGCTTGTAAAATCTTATATTGGTAGCTTTTTTTTTTAAAGCAACTTGAAGATGATATGCATGATTTATCTATCTTCTATTTTTGGGTTAAAACATAAGAGACCAGAAAGGTATCTTAGAATGTGTTTGGCTAATTAGCTAAGCTAACTGTTGACTTATTATTATTATTATCAGGCTGGACTAGCACTGGGGGATCTGAAATCGGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTGCTTTTCTTTATTGGTTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGAAGGCGCAATTTTTTGGGCTCCGTCATTTCTGCCTGAGCCATGTGCATGGGTTGGCTGCTATAACAGGTCTTGTAGTATGTGTTTTTCAGACCCCCTTGAAATATAATTATTGAATTTATGAGAAAAACTTTCCCACTCATGTCATCTTATGTGCCTACATGAAGTTGGCCTTATAATATAGCTGATCTGTTTCAGGTTATTATCTATAGATGTCATTGATTATTTTACGATTTTAAAGATCTATTGCTAGTCACGGAGGTGCTATCGACACTCCTTTTGAAGAAAACTTAACTGTCATTTCGAAGAAAACAGTAACAGTTAACCATCATGTTGAAGATACCAATTTACCACAATGATCATAAGAGATGTCATTTAGGGGGCTTCCTGATGCTATAAAGTTGCATTCATTCGCCCTTATATGTTGTCAAATCAGTTTTAGTTGTATTCGCCTTTTCGAGTCACACTTTTTTAATGTTCTCCGTTGTTTAGTTCTACATCTTATATACCAACTCCCTCTTGTTTTCTTGGTTTGCACAGATTGATATTGGTTTCAAGTACTCCGATTGATGATACATCATGGCGATACCGTGGAATTCAGGTGCAGATCGTGGACGATCAAGCTGTTATAGTTTCAAATTATAGGTTCAGTAGATAAATAGGTGTTTGGAGGCTTTAAAAAGAAAATTTAGGTGAAGATATTTTGAACTCACATTAGGAGCTCACTGATTACACTCATATAGGTTATTTTATATTTATCATCATTTTTTGTTGCACTATATATTCAAAAAGCATACAGGGTCTAGACAAGTTACAAATTGAACACTAACTATACATTTTTCTATAGATTTCTA

mRNA sequence

GTCAAAATTTTGATTCGTTCACCGTCTTCCTCAATTACTCTCCCCAAGATCACAAGGTTTCGAATACAAATTTCTCATCATTCCCCTGTTTTCTAAGTTTCTCAGATTCCCCAATTTCTCAAATTTTGACACAAACCCAGATTTTCATATACGATTCTCTCAAATCCCCAACAACATAGCCAACACCCAGATCTCCCTTCACTATTTCTCTTACTAATCAAGCTGTTGACCTCAATTTGACGTTTGAATAACCCGCAAACGTCGAATCAGTGTTCTTGAGCTACTTTCTTGAAAACCCTTTTGAAATTTTGGGGGAAATCTTGAGTTCGATCTGTTAATGGCGCCATTGAGGAATGTGGCGGTGAGGGATGAGGAGAAGCTGAAGGAAGAAGACGACTCCCCAACGGCTAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAATGGGAGCTGGCTGTGGCTATTGCTATATTCTTTGTGTGCTCTACTGGCCTTGTGTGTGTGTACTTGACGATGCCTTCTGCAGAATATCAGAGCGTTAAGCTCCCAAGGACCCTTTCGGATCTTCGAGTTCTCAAGAATCTCTTTGCAAGTTATGCCAAAGATCATCCAGCACAATTCATTCTAGGTTATTGCTCCACCTACATATTCATGCAAACTTTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGGCTTCTGTTAGTTGTCTTTAATGCAACAGCTGGTGCATCCTCATGCTTTTTTCTTTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAAATGTTCCAGGCCAAGATTGCGAAGCATCGAGAAAAGCTGCTCAATTATATGCTTTTTCTGAGGATAACTCCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTCCATGTATTCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTATATCACAGTCAGGGCTGGACTAGCACTGGGGGATCTGAAATCGGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTGCTTTTCTTTATTGGTTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGAAGGCGCAATTTTTTGGGCTCCGTCATTTCTGCCTGAGCCATGTGCATGGGTTGGCTGCTATAACAGATTGATATTGGTTTCAAGTACTCCGATTGATGATACATCATGGCGATACCGTGGAATTCAGGTGCAGATCGTGGACGATCAAGCTGTTATAGTTTCAAATTATAGGTTCAGTAGATAAATAGGTGTTTGGAGGCTTTAAAAAGAAAATTTAGGTGAAGATATTTTGAACTCACATTAGGAGCTCACTGATTACACTCATATAGGTTATTTTATATTTATCATCATTTTTTGTTGCACTATATATTCAAAAAGCATACAGGGTCTAGACAAGTTACAAATTGAACACTAACTATACATTTTTCTATAGATTTCTA

Coding sequence (CDS)

ATGGCGCCATTGAGGAATGTGGCGGTGAGGGATGAGGAGAAGCTGAAGGAAGAAGACGACTCCCCAACGGCTAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAATGGGAGCTGGCTGTGGCTATTGCTATATTCTTTGTGTGCTCTACTGGCCTTGTGTGTGTGTACTTGACGATGCCTTCTGCAGAATATCAGAGCGTTAAGCTCCCAAGGACCCTTTCGGATCTTCGAGTTCTCAAGAATCTCTTTGCAAGTTATGCCAAAGATCATCCAGCACAATTCATTCTAGGTTATTGCTCCACCTACATATTCATGCAAACTTTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGGCTTCTGTTAGTTGTCTTTAATGCAACAGCTGGTGCATCCTCATGCTTTTTTCTTTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAAATGTTCCAGGCCAAGATTGCGAAGCATCGAGAAAAGCTGCTCAATTATATGCTTTTTCTGAGGATAACTCCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTCCATGTATTCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTATATCACAGTCAGGGCTGGACTAGCACTGGGGGATCTGAAATCGGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTGCTTTTCTTTATTGGTTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGA

Protein sequence

MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRKRVYE

Homology

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BLAST of Sed0001822 vs. NCBI nr
Match: XP_038900052.1 (uncharacterized membrane protein At4g09580 [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 258/271 (95.20%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV VRDEEKLK EDDSPTAKKPKFERFPLTKWELA A+ IF VCS GLVCVYLTM
Sbjct: 1   MAASRNVGVRDEEKLK-EDDSPTAKKPKFERFPLTKWELAAALGIFLVCSIGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLK FQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKFFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. NCBI nr
Match: XP_022926209.1 (uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_022926211.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_022926212.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_023521319.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023521320.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023522459.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo] >XP_023522460.1 uncharacterized membrane protein At4g09580-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 256/271 (94.46%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNVAVRDEEKLK EDDSPTAKKPK+ERFPLTKWELA A+AIF VC TGLVCVYLTM
Sbjct: 1   MAASRNVAVRDEEKLK-EDDSPTAKKPKYERFPLTKWELAAALAIFLVCFTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQS+KLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTY+FMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSIKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYVFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGA SCFFLSKLIGRPLVYWMWPEKLKMFQ++IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGACSCFFLSKLIGRPLVYWMWPEKLKMFQSEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. NCBI nr
Match: XP_022143652.1 (uncharacterized membrane protein At4g09580-like isoform X1 [Momordica charantia] >XP_022143653.1 uncharacterized membrane protein At4g09580-like isoform X1 [Momordica charantia])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 257/271 (94.83%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV VRDEEKLK EDDSPTAKKPKFERFPLT+WELA A+A+F VCS GLVCVYLTM
Sbjct: 1   MASSRNVGVRDEEKLK-EDDSPTAKKPKFERFPLTRWELAAALAMFLVCSIGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           P+AEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PAAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. NCBI nr
Match: XP_031745009.1 (uncharacterized membrane protein At4g09580 [Cucumis sativus] >KGN44374.1 hypothetical protein Csa_016650 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 256/271 (94.46%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV +RDEEKLK EDDSPTAKKPKFERFPLTKWELA A+ IF +CSTGLVCVYLTM
Sbjct: 1   MAASRNVGMRDEEKLK-EDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLK+FQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALG+LKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. NCBI nr
Match: KAG6607628.1 (putative membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037228.1 putative membrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.0 bits (1273), Expect = 4.2e-136
Identity = 255/271 (94.10%), Postives = 263/271 (97.05%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV VRDEEKLK EDDSPTAKKPK+ERFPLTKWELA A+AIF VC TGLVCVYLTM
Sbjct: 1   MAASRNVVVRDEEKLK-EDDSPTAKKPKYERFPLTKWELAAALAIFLVCFTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQS+KLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTY+FMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSIKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYVFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGA SCFFLSKLIGRPLVYWMWPEKLKMFQ++IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGACSCFFLSKLIGRPLVYWMWPEKLKMFQSEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot
Match: Q8L586 (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At4g09580 PE=1 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.2e-110
Identity = 199/253 (78.66%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 19  DDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLR 78
           DDSPT K+ K ERFPL++WE AV   +F V +TGL C+YLTMP+AEY  +K+PRT+SDLR
Sbjct: 35  DDSPTGKRTKSERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLR 94

Query: 79  VLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNA 138
           +LK    SYA ++ A+FILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV+RG +LVV NA
Sbjct: 95  LLKENLGSYASEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNA 154

Query: 139 TAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFIN 198
           TAGA SCFFLSKL+GRPLV W+WPEKL+ FQA+IAK R++LLNYMLFLRITPTLPNLFIN
Sbjct: 155 TAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFIN 214

Query: 199 LASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFIS 258
           L+SPIVDIPFHVFFLATL+GL+PASYITVRAGLALGDL+SVKDLYDFKTLSVLF IG IS
Sbjct: 215 LSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSIS 274

Query: 259 ILPTLLKRKRVYE 272
           I P LLKRKRVYE
Sbjct: 275 IFPALLKRKRVYE 287

[Close]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot
Match: Q8MXN7 (Transmembrane protein 41 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275543 PE=3 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-44
Identity = 94/238 (39.50%), Postives = 156/238 (65.55%), Query Frame = 0


Query: 33  PLTKWELAVAIAIFFVCSTGLVCVYLTMPS---AEYQSVKLPRTLSDLRVLKNLFASYAK 92
           PL  W L +   +F V  + +V ++L  PS      Q ++LP+   D+++L ++ + Y  
Sbjct: 96  PLPLWLLVI---VFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQYTD 155

Query: 93  DHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLS 152
           D+    I  +   Y F+Q F IPG++F+S L+G LFG+  G  LV F AT GA+  + +S
Sbjct: 156 DNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLIS 215

Query: 153 KLIGRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFH 212
             IGR LV  ++P+KLK+F   +++ R+ LLNY++FLRITP LPN FINLASP++D+P H
Sbjct: 216 YYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIH 275

Query: 213 VFFLATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRK 268
            F + T IG++PA+++ V+AG+ + ++++  D++D K++  +  +  +SILPTL+++K
Sbjct: 276 TFAIGTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQKK 330

[Close]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot
Match: Q5ZIL6 (Transmembrane protein 41B OS=Gallus gallus OX=9031 GN=TMEM41B PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.2e-42
Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 0


Query: 39  LAVAIAIFFVCSTGLVCVYLTMP---SAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQF 98
           L + ++IF + +  +  VY   P     E + +K+PR + D + L  + + Y      Q 
Sbjct: 32  LLILVSIFTIAAFLMFLVYKNFPQLSEEEGKCIKIPRDMDDAKALGKVLSKYKDTFYVQV 91

Query: 99  ILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRP 158
           ++ Y +TY+F+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+GRP
Sbjct: 92  LVAYFATYVFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRP 151

Query: 159 LVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLAT 218
           +VY    EK   +  ++ +HRE L+NY++FLRITP LPN FIN+ SP++++P  VFF+ T
Sbjct: 152 VVYKYLTEKAVKWSEQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGT 211

Query: 219 LIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRK 268
            +G+ P S++ ++AG  L  L +  +   + +L VL  +  +SILP L ++K
Sbjct: 212 FLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSLFVLMILAILSILPALFQKK 263

[Close]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot
Match: Q5BJD5 (Transmembrane protein 41B OS=Homo sapiens OX=9606 GN=TMEM41B PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.1e-41
Identity = 86/235 (36.60%), Postives = 142/235 (60.43%), Query Frame = 0


Query: 36  KWELAVAIAIFFVCSTGLVCVYLTMP---SAEYQSVKLPRTLSDLRVLKNLFASYAKDHP 95
           +  L + ++IF   +  +  VY   P     E  ++K+PR + D + L  + + Y     
Sbjct: 51  RMSLLILVSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFY 110

Query: 96  AQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLI 155
            Q ++ Y +TYIF+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+
Sbjct: 111 VQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLV 170

Query: 156 GRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFF 215
           GRP+VY    EK   +  ++ +HRE L+NY++FLRITP LPN FIN+ SP++++P  VFF
Sbjct: 171 GRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFF 230

Query: 216 LATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRK 268
           + T +G+ P S++ ++AG  L  L +  +   + ++ +L  +  +SILP + ++K
Sbjct: 231 IGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285

[Close]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot
Match: Q5U4K5 (Transmembrane protein 41B OS=Xenopus laevis OX=8355 GN=tmem41b PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.1e-41
Identity = 85/235 (36.17%), Postives = 143/235 (60.85%), Query Frame = 0


Query: 36  KWELAVAIAIFFVCSTGLVCVYLTMP---SAEYQSVKLPRTLSDLRVLKNLFASYAKDHP 95
           +  L + ++IF   ++ +  VY   P     E + +K+PR + D + L  + + Y     
Sbjct: 38  RMSLLILVSIFLCAASVMFLVYKYFPQLSEEELEKIKVPRDMDDAKALGKVLSKYKDTFY 97

Query: 96  AQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLI 155
            + ++ Y +TYIF+QTF IPG+IF+S+L+G L+     L LV   +  GAS C+ LS L+
Sbjct: 98  VEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYLLSYLV 157

Query: 156 GRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFF 215
           GRP+VY    +K   +  ++ +HR+ L+NY++FLRITP LPN FIN+ SP++++P  VFF
Sbjct: 158 GRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFF 217

Query: 216 LATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRK 268
           L T IG+ P S++ ++AG  L  L +  +   + ++ +L  +  +SILP + ++K
Sbjct: 218 LGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVLAVLSILPAIFQKK 272

[Close]

BLAST of Sed0001822 vs. ExPASy TrEMBL
Match: A0A6J1CRG1 (uncharacterized membrane protein At4g09580-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013513 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.0e-137
Identity = 257/271 (94.83%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV VRDEEKLK EDDSPTAKKPKFERFPLT+WELA A+A+F VCS GLVCVYLTM
Sbjct: 1   MASSRNVGVRDEEKLK-EDDSPTAKKPKFERFPLTRWELAAALAMFLVCSIGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           P+AEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PAAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. ExPASy TrEMBL
Match: A0A6J1EEH6 (uncharacterized membrane protein At4g09580-like OS=Cucurbita moschata OX=3662 GN=LOC111433391 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 7.0e-137
Identity = 256/271 (94.46%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNVAVRDEEKLK EDDSPTAKKPK+ERFPLTKWELA A+AIF VC TGLVCVYLTM
Sbjct: 1   MAASRNVAVRDEEKLK-EDDSPTAKKPKYERFPLTKWELAAALAIFLVCFTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQS+KLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTY+FMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSIKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYVFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGA SCFFLSKLIGRPLVYWMWPEKLKMFQ++IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGACSCFFLSKLIGRPLVYWMWPEKLKMFQSEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. ExPASy TrEMBL
Match: A0A0A0K623 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G273650 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 256/271 (94.46%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV +RDEEKLK EDDSPTAKKPKFERFPLTKWELA A+ IF +CSTGLVCVYLTM
Sbjct: 1   MAASRNVGMRDEEKLK-EDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLK+FQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALG+LKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. ExPASy TrEMBL
Match: A0A6J1IUC8 (uncharacterized membrane protein At4g09580-like OS=Cucurbita maxima OX=3661 GN=LOC111480654 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 255/271 (94.10%), Postives = 263/271 (97.05%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNVAVRDEEKLK EDDSPTAKKPK+ERFPLT+WELA A+AIF VC TGLVCVYLTM
Sbjct: 1   MAASRNVAVRDEEKLK-EDDSPTAKKPKYERFPLTRWELAAALAIFLVCFTGLVCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQS+KLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTY+FMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSIKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYVFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGA SCFFLSKLIGRPLVYWMWPEKLKMFQ +IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGACSCFFLSKLIGRPLVYWMWPEKLKMFQTEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. ExPASy TrEMBL
Match: A0A1S4E3J1 (uncharacterized membrane protein At4g09580-like OS=Cucumis melo OX=3656 GN=LOC103500434 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.7e-136
Identity = 255/271 (94.10%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MAPLRNVAVRDEEKLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTM 60
           MA  RNV +RDEEKLK EDDSPTAKKPKFERFPLTKWELA A+ IF +CSTGL+CVYLTM
Sbjct: 1   MAASRNVGMRDEEKLK-EDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLLCVYLTM 60

Query: 61  PSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120
           PSAEYQSVKLPRTLSDLRVLK+LFA+YAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL
Sbjct: 61  PSAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLL 120

Query: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLL 180
           AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLK+FQA+IAKHREKLL
Sbjct: 121 AGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLL 180

Query: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVK 240
           NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALG+LKSVK
Sbjct: 181 NYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVK 240

Query: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           DLYDFKTLSVLFFIGFISILPTLLKRKRVYE
Sbjct: 241 DLYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Sed0001822 vs. TAIR 10
Match: AT1G71940.1 (SNARE associated Golgi protein family )

HSP 1 Score: 411.0 bits (1055), Expect = 7.5e-115
Identity = 202/273 (73.99%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MAPLRNVAVRDEE--KLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYL 60
           MAP R +  RDEE   + ++DDSP+ K+ K +RFPL++WELAV++ +F V S+GL C+Y+
Sbjct: 1   MAPTR-ILTRDEELGVISDDDDSPSGKRSKLDRFPLSRWELAVSLGVFLVFSSGLCCIYM 60

Query: 61  TMPSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMS 120
           TMP+AE+  +KLPR+L+DLR+LK+  A+YA ++PAQF+LGYC+TYIFMQTFMIPGTIFMS
Sbjct: 61  TMPAAEFGKLKLPRSLADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMS 120

Query: 121 LLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREK 180
           LLAGALFGV +G++LVVFNATAGA+SCFFLSKLIGRPL+ W+WP+KL+ FQA+I+K R+K
Sbjct: 121 LLAGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDK 180

Query: 181 LLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKS 240
           LLNYMLFLRITPTLPNLFINLASPIVD+PFHVFFLATLIGL+PA+YITVRAGLA+GDLKS
Sbjct: 181 LLNYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLKS 240

Query: 241 VKDLYDFKTLSVLFFIGFISILPTLLKRKRVYE 272
           VKDLYDFKTLSVLF IGFISILPT+LKRK++ E
Sbjct: 241 VKDLYDFKTLSVLFLIGFISILPTILKRKKIVE 272

[Close]

BLAST of Sed0001822 vs. TAIR 10
Match: AT4G09580.1 (SNARE associated Golgi protein family )

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-111
Identity = 199/253 (78.66%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 19  DDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLR 78
           DDSPT K+ K ERFPL++WE AV   +F V +TGL C+YLTMP+AEY  +K+PRT+SDLR
Sbjct: 35  DDSPTGKRTKSERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLR 94

Query: 79  VLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNA 138
           +LK    SYA ++ A+FILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV+RG +LVV NA
Sbjct: 95  LLKENLGSYASEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNA 154

Query: 139 TAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFIN 198
           TAGA SCFFLSKL+GRPLV W+WPEKL+ FQA+IAK R++LLNYMLFLRITPTLPNLFIN
Sbjct: 155 TAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFIN 214

Query: 199 LASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFIS 258
           L+SPIVDIPFHVFFLATL+GL+PASYITVRAGLALGDL+SVKDLYDFKTLSVLF IG IS
Sbjct: 215 LSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSIS 274

Query: 259 ILPTLLKRKRVYE 272
           I P LLKRKRVYE
Sbjct: 275 IFPALLKRKRVYE 287

[Close]

BLAST of Sed0001822 vs. TAIR 10
Match: AT1G71940.2 (SNARE associated Golgi protein family )

HSP 1 Score: 375.2 bits (962), Expect = 4.5e-104
Identity = 183/249 (73.49%), Postives = 225/249 (90.36%), Query Frame = 0


Query: 1   MAPLRNVAVRDEE--KLKEEDDSPTAKKPKFERFPLTKWELAVAIAIFFVCSTGLVCVYL 60
           MAP R +  RDEE   + ++DDSP+ K+ K +RFPL++WELAV++ +F V S+GL C+Y+
Sbjct: 1   MAPTR-ILTRDEELGVISDDDDSPSGKRSKLDRFPLSRWELAVSLGVFLVFSSGLCCIYM 60

Query: 61  TMPSAEYQSVKLPRTLSDLRVLKNLFASYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMS 120
           TMP+AE+  +KLPR+L+DLR+LK+  A+YA ++PAQF+LGYC+TYIFMQTFMIPGTIFMS
Sbjct: 61  TMPAAEFGKLKLPRSLADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMS 120

Query: 121 LLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKMFQAKIAKHREK 180
           LLAGALFGV +G++LVVFNATAGA+SCFFLSKLIGRPL+ W+WP+KL+ FQA+I+K R+K
Sbjct: 121 LLAGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDK 180

Query: 181 LLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGDLKS 240
           LLNYMLFLRITPTLPNLFINLASPIVD+PFHVFFLATLIGL+PA+YITVRAGLA+GDLKS
Sbjct: 181 LLNYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLKS 240

Query: 241 VKDLYDFKT 248
           VKDLYDFKT
Sbjct: 241 VKDLYDFKT 248

[Close]

BLAST of Sed0001822 vs. TAIR 10
Match: AT4G17790.1 (SNARE associated Golgi protein family )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 142/237 (59.92%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 32  FPLTKWELAVAIAIFFVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKNLFASYAKDH 91
           + L+ WE+  A  +      GLVCVYLTMP ++Y  +KLPR L DL++L++    Y  D+
Sbjct: 27  YSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRDNLEIYTSDY 86

Query: 92  PAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKL 151
             Q ++GYC  Y+FMQTFMIPGT+FMSLLAGALFGV++G+ LVV  ATAGASSC+FLSKL
Sbjct: 87  TVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGASSCYFLSKL 146

Query: 152 IGRPLVYWMWPEKLKMFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVF 211
           IGRPL++ +WP+KL  FQ ++A+ +++LLNYMLFLR+TPTLPN FIN+ASPIVD+P+H+F
Sbjct: 147 IGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIF 206

Query: 212 FLATLIGLVPASYITVRAGLALGDLKSVKDLYDFKTLSVLFFIGFISILPTLLKRKR 269
           FLAT IGL+PA+++TVRAGLALG+LKS+ DLYDF +++ L  IG +S+ PTL+ +K+
Sbjct: 207 FLATFIGLIPAAFVTVRAGLALGELKSLGDLYDFSSMATLCLIGVLSVTPTLIGKKQ 263

[Close]

BLAST of Sed0001822 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-06
Identity = 41/146 (28.08%), Postives = 68/146 (46.58%), Query Frame = 0


Query: 97  LGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPL 156
           L     YI +    +P ++ ++L  G LFG+  G +     AT GA++ F L + IG+  
Sbjct: 53  LALALAYIPLTIVAVPASV-LTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSY 112

Query: 157 VYWMWPEKLK---MFQAKIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFL 216
           V      K+K    FQA     ++     +L LR+ P LP   +N    +  +    + L
Sbjct: 113 V----TSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYML 172

Query: 217 ATLIGLVPASYITVRAGLALGDLKSV 240
           AT +G++P ++  V  G  L DL  +
Sbjct: 173 ATWLGMMPITFALVYVGTTLKDLSDI 193

The following BLAST results are available for this feature:

BLAST of Sed0001822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900052.1	1.4e-136	95.20	uncharacterized membrane protein At4g09580 [Benincasa hispida]	[more]
XP_022926209.1	1.4e-136	94.46	uncharacterized membrane protein At4g09580-like [Cucurbita moschata] >XP_0229262...	[more]
XP_022143652.1	1.4e-136	94.83	uncharacterized membrane protein At4g09580-like isoform X1 [Momordica charantia]...	[more]
XP_031745009.1	2.5e-136	94.46	uncharacterized membrane protein At4g09580 [Cucumis sativus] >KGN44374.1 hypothe...	[more]
KAG6607628.1	4.2e-136	94.10	putative membrane protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]

BLAST of Sed0001822 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L586	3.2e-110	78.66	Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8MXN7	1.8e-44	39.50	Transmembrane protein 41 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G02...	[more]
Q5ZIL6	8.2e-42	37.93	Transmembrane protein 41B OS=Gallus gallus OX=9031 GN=TMEM41B PE=2 SV=1	[more]
Q5BJD5	9.1e-41	36.60	Transmembrane protein 41B OS=Homo sapiens OX=9606 GN=TMEM41B PE=1 SV=1	[more]
Q5U4K5	9.1e-41	36.17	Transmembrane protein 41B OS=Xenopus laevis OX=8355 GN=tmem41b PE=2 SV=1	[more]

BLAST of Sed0001822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRG1	7.0e-137	94.83	uncharacterized membrane protein At4g09580-like isoform X1 OS=Momordica charanti...	[more]
A0A6J1EEH6	7.0e-137	94.46	uncharacterized membrane protein At4g09580-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0K623	1.2e-136	94.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G273650 PE=4 SV=1	[more]
A0A6J1IUC8	2.0e-136	94.10	uncharacterized membrane protein At4g09580-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S4E3J1	2.7e-136	94.10	uncharacterized membrane protein At4g09580-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0001822 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71940.1	7.5e-115	73.99	SNARE associated Golgi protein family	[more]
AT4G09580.1	2.2e-111	78.66	SNARE associated Golgi protein family	[more]
AT1G71940.2	4.5e-104	73.49	SNARE associated Golgi protein family	[more]
AT4G17790.1	1.1e-81	59.92	SNARE associated Golgi protein family	[more]
AT1G03260.1	1.5e-06	28.08	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 111..230 e-value: 8.7E-18 score: 64.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR43220:SF3	EXPRESSED PROTEIN	coord: 7..271
IPR045014	Transmembrane protein 41A/B	PANTHER	PTHR43220	FAMILY NOT NAMED	coord: 7..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001822.1	Sed0001822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane