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Sed0001807 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGCAAGTGAAGAAAAATAAAAGGTAATGGAAAGAAAAGTAAAAATAATGTGCCTTCATGGGTTTCGAACCAGTGGAGCAATCTTGAAGAAGCAGTTCCAAAAATGGCCCAATGCCGTCCTCCAGCGTTTCGATCTCCATTTTCCCGATGCTCCATTTCATGCCTCCGGAGATTCTGGACTCGAAGGGATTTTCGATCCTCCTTATTTCGAATGGTTTCAATTGAATTCGGTAAATAGAGATGTTCATTTTTCTTGCACGGATCTGGGTTAGGGACGGGAAAAATCTGTTGGGCATGGGCTAATCGAGGCAGGAGACAGGGAATGTATTTCCCGTCCCCAATTTTTCGATACTCGCCACTTACCTTTTTTTTTTATAAAAAAAATATTTTTTCTTTATTTCAGTCTTTTAATTTTCAAATAAAAATATATTTGTGGATCCATATAAATATTTTTCTTTAGTAATTAATATTATACTTTAAATTTTATAGATATTTTCTAAAAAAAATATAATTATTTATAAGTATTGGGGTAATGAATTGCTTTTTAGAGAAAAAATACACAACTCAAAAAAAAATATATGAGTTGGAATATTTGATCAAATTGCTCAAATACGTAAGGTTAAACGAATTAGCACAAAATTTGAATTGATCCAACTCCTAATACAACCCAACCTCCATCATAATTATGGGCTAACTTATTGGAAGGTATAAGTATACATGGTTTAGGTTACATTTAGTTAGAGAGAAACTCTTTAAGCCTTCGTCCATATCCATAATTTTGAATGAAAAAAATAAAGAAAAATCTCATGATATTAAACTCTAATCTAATATGTGAATTTTGCAACTATATTTAGTATCATATATATAACGATTATAGTAGGAATCATCACTCTTAAATACATGATTTTGATAAATAGAGTTCCAAAAACTATAAAAAGAACTTTTTAGTTCACTTACAAAAGAAGGATCATTATCAATCAGAATTGTCACTATCACTATGACTAGGAATATCAATTAATATTCATCATAAGCTATAATATAGGTTATTGATACAATATTTTGTATTAATTTTTTTTTTTTTAGTACATATTGGGGGTGGAAGGACAAATACTGATTTTCGGGCTCATACCCGTAACGCTGGTATTGAACTAGTTTACAACCAAACACTGAAACCATTGCACCACCGACCCATTCGATAATATTGTGTATTAATTATACCTTATAATTTGTGTACAGTATGTTTATGAGTTTTTTTTTTCCTAGTACTGTAAATATTTTTCTAATTTGACATATTCTTAAAAATACCCCTATAATATAACTTAATTTTTGTAATTTGTTCTTGATTCTTTTGTCCATCTATAACAAAAGGTACTTGAATTTTGACAGGAAGAAAATGGTTACTTAAATTTGGAAGAATGTCTTCAATACATTGAGAATTACATGCTTAACCACGGACCTTTCGACGGGCTTCTCGGTTTCTCACAGGTTATATTATGACTCTCATTTCGTATTTTAATTTTGGAAAAAAACTTATGAGATTAGTCAAATTTAGAAAATGACTATAATTATGGTCATTTTTTCAAAAAAAATTTAGCCATCATAATCATTGATAATAATGGTAATGATAAATTAATAATGCACAATATTATTTAATGAATATTAATAATACAATATTAACTCTTATAAATTTAAATATTTTAAAATTTGCTTCCCTTCATGATTAGCAATTTCCTTTTACTTTTTTTACTTTCAAGTTATTGTTATCTATTTTTTGAAATCGAAGCCAAAATTTCAAAACAAAGGCTACCTTGAAACCATACGTTTGAAAATTTTCACTAGGTTAACTATGTTTTGAAACTAAACAAAAGTAGATGTTTGATACAAGATTCGAAATTTCTAAGTATACGATGGCACAAAATTGAAAGTACAAAACCAATATATTTATTATTAAATGGGTTGTTGACGTATTGTTTATCTTCATTGTTGGTAATATAGTTCAATTCTAGAGTCACATATTAAATTCTTAAAAATAGATATCTAGCTTTAATCTTATTTAAAAAGTAGTAATACACTCATCCAAGATTGTTCGAAATCTAGTAACAACTTCTATTTAAAGTTTGCATGCGAGAAAAGAACTTCTACTTGTTAGGAAAGAGGCTCACTAGGTGAGCCTGTTCTTTGCGTGTTCAGCCTAGGCCCATGGGAGGGGTATGTTATGGGCTATATTTGATATTTTATTATATGTAAAGCCCAATAGGGCTTATGTGTGTGTGAGTGAATAGGGGTTGCTCGTCCCAGAATATCTTAAAGGAGTTTTTCGTCTCTGTTGTGAGAATGCCCTTCTTCTTTTCTTCTTGATGTAGACTGTGTGGACTCTCCATGTTTGAGCAGCATGTTATAATAATAGGCAACAGAGGTTTTCTCCTAGTTTTTCTTGTGCTCTTGTTTTCTTAACTCTACTAAATGAACAATAACCATAAAATGGCTTCTTTCAAAAAAAAAAAAAATAACCATAAAATGGAAAGATAGCCATTAATAAATTAAATAGATAGAAATCTAACATTTTTGAAGTTGTCCTCAATCTCATTGGTTGTATTGTATTATGAATTTTCAGGGGGCAGCGTTAGCGGCGGCACTACCCGGACTTCAAGAGAAGGTAAATATGATGGTTTGAATTTTGGAAAAATAAAATAAAGTGGATTTAAATTGATTGACCCACCCTAATAACCATTTTGTTTACATTTTGATTTTTTAAATTTAAAAATTATTTTTAATCGAATTTTTTACATGTATTTATCTGTCTTTAAGAAATTTTATAAATATTAACTAAATTTTAAAAATCATTTTTCTTATTTAATTTTTAAAAATATATGAAAGAGGTAGATATTTAAGTAAGAAACAATATATGATAAACTAATAATTGTAAATTTAAATTTTAAAAATTAATAAAAAATTAAATGGTTATGAGATGAGATGGATTAGAATTTTATAGAAATGCACAGGGTTTAAGGTTTAGAGTTTAGGGTTTACGGTTTAGGGTTTGTGTTTGGGGCAAGCAGAATGGTAATGATTAATGGGGAATGGTAATGAGGAGGAGAATAGGGAGGAGAATGATTATTGGGGTAATGGTTATTTGTGTTTGGGGTGAAGGTAATGATTATGAGGAGAATGATTATTTGTGTTTGAGATAAAGGTAATGATTGTGAAAAAAATAAAATAATAAATATGATGTGAGTGAAAAATAGTGATGTAATGTATGAAAAGTTGTTGGAGAGAGAATAAAAAGTAGTTAGGGGGAGAATGAAAAAAAATGATTTTTGAAAAACGTGATTATGAGAGAATGATTCCCGGTGCCCCAAACAGCCCCCAAAAAAACTCTTTGGAAACCCTTGTCCTTTTTTGACCAAGCATTTGTTTCCTTATCTCCTTAATAAAATTGTTTTTTCATCTACTTATAAACATAGCTAGTATGATGTTAATAAACCAGGTTAACTATCGTGCTATATCTTTTTTATATTGATTGTTGTGACATTTTCATAACATTCGGGTTGAATTAAGCAGGGTATTACGCTCGCGAAAGTGCCAACGATTAAATTTGTAATCGTCATCAGCGGTTCGAAGTTGTGGCTGCCATCTCTGCCCGCCCTAGAAGCTTACTCTCCATCGATTGCCTGCCCATCCCTCCATTTCCTAAGTAACCCCTCAACATTCTATACTTTTGGTGAAAATTATAGATATAGTTTTTAATTTGAACCAAGTTAAAATTTTAGTTAACTTTTTGTGGTTAAAATGAATTATGGACTAATTAAGTATGCGGTAGTTAATTATTCATATGTTAATAATGATTAAATTACTTAGTGACTAATTGAACAAAAAAACACTTCATTTATACATGAATTATTTATTTATTTATTTATTTAACTATGCATATTACATTTTAATTTTTAAAATCAGAGAACTAAACTCAATTCTAATTTTCTTTCAACTCCATAAACTTAATTTAAAATTTTAGAATTATATATATTTAGAGTTTGAATATTACGATTATGATTCGATATTGAAAATTGATATTTATTTAAGAGAAATAATACCTTTCATGTAGAGTTTGTGATCCCCTCCTCGAATTGGTACTAAAAAAAATCATATTTTTATTGGCTTGGGCAGGTGAGCAAGATTTCTTAAAGTCCAATGGATTGGAGCTTCTAAAGTCATTTATTGAACCATTAGTAATTGATCATTCTAAAGGCCACACCGTGCCAAGACTTGGTAATAATATTTATTCCATTCTTAATTATATTATATTATATATATATATAATTTCTGGTCCTAATTTAAATATTTTTCAGATGAACAAAACTTGAAGGTTGTGGAGAGCTTCTTCGACAGGATTTCAAGGATTTCAAAGATGTGACTGCTCCTCCATATATTTCAAAATTGTATTCAACTTCTTATCTTTGGTTCAACAATCAGAAATATTTACATCATGCTCGGACATGATGTATACAATAATGCTCTTCTATGTGGTCCAATATGCGCCACAATCTATTTTTGTTTATTTTATCTTTTGAATTTAAAATCAAATACATTGTGGTCTATATCAAACCACACGGGTGGACATTAAATTATACATCATATCCAGACATGATGTAAATATTCATCTATAGAAGATGTTGAGC TATGCAAGTGAAGAAAAATAAAAGGTAATGGAAAGAAAAGTAAAAATAATGTGCCTTCATGGGTTTCGAACCAGTGGAGCAATCTTGAAGAAGCAGTTCCAAAAATGGCCCAATGCCGTCCTCCAGCGTTTCGATCTCCATTTTCCCGATGCTCCATTTCATGCCTCCGGAGATTCTGGACTCGAAGGGATTTTCGATCCTCCTTATTTCGAATGGTTTCAATTGAATTCGGAAGAAAATGGTTACTTAAATTTGGAAGAATGTCTTCAATACATTGAGAATTACATGCTTAACCACGGACCTTTCGACGGGCTTCTCGGTTTCTCACAGGGGGCAGCGTTAGCGGCGGCACTACCCGGACTTCAAGAGAAGGGTATTACGCTCGCGAAAGTGCCAACGATTAAATTTGTAATCGTCATCAGCGGTTCGAAGTTGTGGCTGCCATCTCTGCCCGCCCTAGAAGCTTACTCTCCATCGATTGCCTGCCCATCCCTCCATTTCCTAAGTGAGCAAGATTTCTTAAAGTCCAATGGATTGGAGCTTCTAAAGTCATTTATTGAACCATTAGTAATTGATCATTCTAAAGGCCACACCGTGCCAAGACTTGATGAACAAAACTTGAAGGTTGTGGAGAGCTTCTTCGACAGGATTTCAAGGATTTCAAAGATGTGACTGCTCCTCCATATATTTCAAAATTGTATTCAACTTCTTATCTTTGGTTCAACAATCAGAAATATTTACATCATGCTCGGACATGATGTATACAATAATGCTCTTCTATGTGGTCCAATATGCGCCACAATCTATTTTTGTTTATTTTATCTTTTGAATTTAAAATCAAATACATTGTGGTCTATATCAAACCACACGGGTGGACATTAAATTATACATCATATCCAGACATGATGTAAATATTCATCTATAGAAGATGTTGAGC ATGGAAAGAAAAGTAAAAATAATGTGCCTTCATGGGTTTCGAACCAGTGGAGCAATCTTGAAGAAGCAGTTCCAAAAATGGCCCAATGCCGTCCTCCAGCGTTTCGATCTCCATTTTCCCGATGCTCCATTTCATGCCTCCGGAGATTCTGGACTCGAAGGGATTTTCGATCCTCCTTATTTCGAATGGTTTCAATTGAATTCGGAAGAAAATGGTTACTTAAATTTGGAAGAATGTCTTCAATACATTGAGAATTACATGCTTAACCACGGACCTTTCGACGGGCTTCTCGGTTTCTCACAGGGGGCAGCGTTAGCGGCGGCACTACCCGGACTTCAAGAGAAGGGTATTACGCTCGCGAAAGTGCCAACGATTAAATTTGTAATCGTCATCAGCGGTTCGAAGTTGTGGCTGCCATCTCTGCCCGCCCTAGAAGCTTACTCTCCATCGATTGCCTGCCCATCCCTCCATTTCCTAAGTGAGCAAGATTTCTTAAAGTCCAATGGATTGGAGCTTCTAAAGTCATTTATTGAACCATTAGTAATTGATCATTCTAAAGGCCACACCGTGCCAAGACTTGATGAACAAAACTTGAAGGTTGTGGAGAGCTTCTTCGACAGGATTTCAAGGATTTCAAAGATGTGA MERKVKIMCLHGFRTSGAILKKQFQKWPNAVLQRFDLHFPDAPFHASGDSGLEGIFDPPYFEWFQLNSEENGYLNLEECLQYIENYMLNHGPFDGLLGFSQGAALAAALPGLQEKGITLAKVPTIKFVIVISGSKLWLPSLPALEAYSPSIACPSLHFLSEQDFLKSNGLELLKSFIEPLVIDHSKGHTVPRLDEQNLKVVESFFDRISRISKM Homology
BLAST of Sed0001807 vs. NCBI nr
Match: KAG6598715.1 (hypothetical protein SDJN03_08493, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78 Identity = 139/211 (65.88%), Postives = 174/211 (82.46%), Query Frame = 0
BLAST of Sed0001807 vs. NCBI nr
Match: XP_022131300.1 (dihydrofolate reductase-like [Momordica charantia]) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-78 Identity = 143/210 (68.10%), Postives = 173/210 (82.38%), Query Frame = 0
BLAST of Sed0001807 vs. NCBI nr
Match: XP_022997265.1 (dihydrofolate reductase-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 300.8 bits (769), Expect = 9.2e-78 Identity = 137/211 (64.93%), Postives = 173/211 (81.99%), Query Frame = 0
BLAST of Sed0001807 vs. NCBI nr
Match: XP_022961840.1 (dihydrofolate reductase-like [Cucurbita moschata]) HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77 Identity = 138/211 (65.40%), Postives = 173/211 (81.99%), Query Frame = 0
BLAST of Sed0001807 vs. NCBI nr
Match: XP_022131301.1 (dihydrofolate reductase-like [Momordica charantia]) HSP 1 Score: 299.3 bits (765), Expect = 2.7e-77 Identity = 138/211 (65.40%), Postives = 174/211 (82.46%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 4.5e-19 Identity = 62/209 (29.67%), Postives = 97/209 (46.41%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy Swiss-Prot
Match: Q9VDL1 (Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.0e-16 Identity = 62/217 (28.57%), Postives = 98/217 (45.16%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy Swiss-Prot
Match: A4II73 (Esterase OVCA2 OS=Xenopus tropicalis OX=8364 GN=ovca2 PE=2 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 8.8e-15 Identity = 66/222 (29.73%), Postives = 99/222 (44.59%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy Swiss-Prot
Match: O13897 (Uncharacterized hydrolase C22A12.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC22A12.06c PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14 Identity = 57/210 (27.14%), Postives = 94/210 (44.76%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy Swiss-Prot
Match: Q94AC1 (Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=STR6 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14 Identity = 67/223 (30.04%), Postives = 99/223 (44.39%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy TrEMBL
Match: A0A6J1BPA7 (dihydrofolate reductase-like OS=Momordica charantia OX=3673 GN=LOC111004563 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 9.0e-79 Identity = 143/210 (68.10%), Postives = 173/210 (82.38%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy TrEMBL
Match: A0A6J1K941 (dihydrofolate reductase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492222 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 4.5e-78 Identity = 137/211 (64.93%), Postives = 173/211 (81.99%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy TrEMBL
Match: A0A6J1HDC8 (dihydrofolate reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111462485 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 5.8e-78 Identity = 138/211 (65.40%), Postives = 173/211 (81.99%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy TrEMBL
Match: A0A6J1BP70 (dihydrofolate reductase-like OS=Momordica charantia OX=3673 GN=LOC111004564 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.3e-77 Identity = 138/211 (65.40%), Postives = 174/211 (82.46%), Query Frame = 0
BLAST of Sed0001807 vs. ExPASy TrEMBL
Match: A0A6J1KAZ1 (esterase CG5412-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492222 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76 Identity = 137/212 (64.62%), Postives = 173/212 (81.60%), Query Frame = 0
BLAST of Sed0001807 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 247.7 bits (631), Expect = 8.6e-66 Identity = 119/209 (56.94%), Postives = 148/209 (70.81%), Query Frame = 0
BLAST of Sed0001807 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 238.0 bits (606), Expect = 6.8e-63 Identity = 113/212 (53.30%), Postives = 151/212 (71.23%), Query Frame = 0
BLAST of Sed0001807 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 192.2 bits (487), Expect = 4.3e-49 Identity = 94/157 (59.87%), Postives = 111/157 (70.70%), Query Frame = 0
BLAST of Sed0001807 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 2.4e-15 Identity = 67/223 (30.04%), Postives = 99/223 (44.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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