Sed0001803 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACGGGGTTTTAGAGGGTTTAGGAGAATCGAGCTGCTAAAACCCGCGAAAGCCAGAGCCTCATCGATCAACACAATGAGCGGTTACAAAATTGCTCATACTTTGCTTCATCGAGCTCGAATGGCCGCCGCCGCCGCCGCCGTCGGACGACCGGCTTCTACCGTCTTCTTTTGCGGCGAAGCAACGTCTTCTCAAAGTTCCTGCTCCTCTTCCGCCCGTCATGTTCATTCCCGTCGCGAGCACGGATTCGTGTTTTCTGCCTCTGCATTCATGCGCTTATTCAGTACTGATTCTTCTAAAGAATTTGAGGATGGAGTGAAGGAAAAAAATCCAGTTCAATGTATGGACGTGTTCTCTTATTCCGCTATTTTTCTCTTATTTTTAGGTTAAATTGAGATTTCTGTTTCGATCATGATTGATTAATGGATCTGTGTACTTGACCGATTACTGATTTCGTAGTTATTACATTTGGACAAATTATAAATTTGGTCTTATGGTTTGAACAAAGTTTGAGTTTAGTCCTTTGTGGTTTTAAAAATTAGAATTTAAACCCTATAATTTGATAAAACCTAAAAAGTTAGTCTACGAAATAATCGTTAGTGAATTAAATGAGTGAAAGTTAGCTATTCATGCGTTAGTGATGAGAGTGTGAGATTTAATGATTGGGCAAAAAATTGCATCATTTACCCGTGAGTAGTTTCTTCCACGTATTTAACTTGCTAGCGATTTACAAACAACATGGGGACTATGTTGTAGGTTTTATCAATCGACTAAATTCTATTTTTTCAAACCATAGAGATTATATTCTATGCTTTGTCCAAATTATAACTACTAAATTCTAGTTTTTTAAATACATGGACTAAAACTCTAACATTCTTATAACTATAGGGATCAAATTTAGAATTTTTACCCATTAACTTTTTATGCTGTAGATGATGTTTGCTGTTAGTGGAATAAATGTCTATGGATGATGTGAGCCAGTCGTGATAAGTTGTTTTGATTGTTGAATTGCTTATCTAGTTTATGTTTAATTGATCTTTTTGTTGCTTCTAATTCTATACGTGCAGTTCTCATGCTTGCAAAGGTTTATGGTAACGATATTATCTAAGAACTAGTTGCTTTTCAGTGTTGATAACCAATTATCAGTATTGTGTGTTGATCTAAATCCTAAGCGTAAATTTTTTATGGTGTCTGGATTTGATGCGGAAGGTTACTTCAGTGTAGAAAAGTTTCCTCATTCTAATGTTAATATCGTGTTCATTGCTTGTTGAATAATTGTCAGGATATTTATTTAACTCTCTTGGACAAAATTGGCTATTGAAAGTTCTAATCTTGGAAATCAATTGTTTAAAAGCCATGCCTAAAGCTTGAGTCTTTAATCTTGGAATGAATTTTTGTAGACGAAAGGGATGATGGGGAAGAAACTACGGATGGATGGGAAGAAGATGATGATTTGGATCCTGAGGTATTTTTATCTGCTGAACTGAGTTTTTAATTTGCAATTATTATAGATGATGCTAATTGTTGATAACATAGCTTGGCGATGGAGGGGGTGGCGGTGGTGTTGTTTTACAAGGCGTGGCATGGGGTGAGCGTGTTCTTTCTCTTGCTCATGGAGTCCTTCAGCAATTTGGCGATGACATAAAACTCTATTCTTTTAAGACTACTCCACGTGGATATATTTATATCAGATTAGACAAGCTCTCAAACCAGTAATTTCCTTCTTTTTGTCTATCCATATTTTCCTGCATAAGGGGTGTGCCTTTTACTTTCTGAGTATTGGGGAATTTGATTTGCAATCACATTTAAAGCCCTTTTGCATGTGTGCATGTGGGAGAGCTCTCCAATCAACCATATGTTGCAGGGTTAGACAAATTGTCTTGTAAGAATAATTTAGGTGTGTAAGCTGACCCCGACACTCACTGATATAAAAGAGACAATCAACTCAAACCTTGTCATACAGTAACAAAAGAAAAAAAAGTAATGATTTCAAACTCAATTGTCTCTGAACCTTCAAGTTCTATTCAATAACGTTTCTTTCGTTCAATATGGATTCTGCCAATTCTGATAGTTTTTATCATCAACTGGATAATGGTGAAATTTCTAGTATTGCTTGCTGGAAATTCTCTTAACCTTGAAAATTAACTGGGCTGGTCTGTTTGGATTACATAATTAGGAATTGCATTGCGGCCTTAACTTGGATTTATAAATTTATAATTTGTAAAATCTTGATCTCTTCCTTAGGTATGGGTGTCCTAGCTTGGAGGAACTTGAAAGTTACAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGGAATATTCCGGATGATTTAGCTTTTGAGGTAACAGCTGATTAGAAATTTAGAATTTACCATTCATCCCGACTCCTGCAGAAAAATAATTGCTTTGTACACAAACAAATTTTTGGCTGCATAAATCATAGAAATGCATCAACACCTCAACAAACATTCTCTTGTTGTGAAGGTATCATCTCCAGGTGCAGAGAGATTACTCAAGGTCCCAGATGATCTGTCTAGATTTAAAGCCATGCCAATGCGAGTGTGCTACATAGAAGAAGTTGAATCGAGAGGCAATGAAAACGATGCAGTTTTTATGTTGGATCATGTGGAATTGGAATCTGAAAGCTGTGTCTGGAAATTAGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGCAGGCCTTTGTCACGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGGAAATCATAAGAAGGTATTCCTTTATCTTGAATGCTGAAAATTAGCACTCAAGGTTCTCAATAAAGGATGAGTATCTATCTGTGTGATTAATTCAAGAGGTTAGTGTTAGTTTTGCGAAGCATTATTTCTTTTTGAGGTCTTGGAGCTTTTGTACTTGTAGACTTTCTTCTGTTTGGAAAATTTGTTATCAGAAGGAGCATCATTTATTCATAGGATGTTTTTCTCCTTTTGGAATTGTTATCTTTGTAAGGATTTGGTATACTGGGTTTCTCGGCTAATTCTGCTTGGGTCAAATCTACACTAATATTTCTTTTCTC CACGGGGTTTTAGAGGGTTTAGGAGAATCGAGCTGCTAAAACCCGCGAAAGCCAGAGCCTCATCGATCAACACAATGAGCGGTTACAAAATTGCTCATACTTTGCTTCATCGAGCTCGAATGGCCGCCGCCGCCGCCGCCGTCGGACGACCGGCTTCTACCGTCTTCTTTTGCGGCGAAGCAACGTCTTCTCAAAGTTCCTGCTCCTCTTCCGCCCGTCATGTTCATTCCCGTCGCGAGCACGGATTCGTGTTTTCTGCCTCTGCATTCATGCGCTTATTCAGTACTGATTCTTCTAAAGAATTTGAGGATGGAGTGAAGGAAAAAAATCCAGTTCAATACGAAAGGGATGATGGGGAAGAAACTACGGATGGATGGGAAGAAGATGATGATTTGGATCCTGAGCTTGGCGATGGAGGGGGTGGCGGTGGTGTTGTTTTACAAGGCGTGGCATGGGGTGAGCGTGTTCTTTCTCTTGCTCATGGAGTCCTTCAGCAATTTGGCGATGACATAAAACTCTATTCTTTTAAGACTACTCCACGTGGATATATTTATATCAGATTAGACAAGCTCTCAAACCAGTATGGGTGTCCTAGCTTGGAGGAACTTGAAAGTTACAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGGAATATTCCGGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTCAAGGTCCCAGATGATCTGTCTAGATTTAAAGCCATGCCAATGCGAGTGTGCTACATAGAAGAAGTTGAATCGAGAGGCAATGAAAACGATGCAGTTTTTATGTTGGATCATGTGGAATTGGAATCTGAAAGCTGTGTCTGGAAATTAGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGCAGGCCTTTGTCACGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGGAAATCATAAGAAGGTATTCCTTTATCTTGAATGCTGAAAATTAGCACTCAAGGTTCTCAATAAAGGATGAGTATCTATCTGTGTGATTAATTCAAGAGGTTAGTGTTAGTTTTGCGAAGCATTATTTCTTTTTGAGGTCTTGGAGCTTTTGTACTTGTAGACTTTCTTCTGTTTGGAAAATTTGTTATCAGAAGGAGCATCATTTATTCATAGGATGTTTTTCTCCTTTTGGAATTGTTATCTTTGTAAGGATTTGGTATACTGGGTTTCTCGGCTAATTCTGCTTGGGTCAAATCTACACTAATATTTCTTTTCTC ATGAGCGGTTACAAAATTGCTCATACTTTGCTTCATCGAGCTCGAATGGCCGCCGCCGCCGCCGCCGTCGGACGACCGGCTTCTACCGTCTTCTTTTGCGGCGAAGCAACGTCTTCTCAAAGTTCCTGCTCCTCTTCCGCCCGTCATGTTCATTCCCGTCGCGAGCACGGATTCGTGTTTTCTGCCTCTGCATTCATGCGCTTATTCAGTACTGATTCTTCTAAAGAATTTGAGGATGGAGTGAAGGAAAAAAATCCAGTTCAATACGAAAGGGATGATGGGGAAGAAACTACGGATGGATGGGAAGAAGATGATGATTTGGATCCTGAGCTTGGCGATGGAGGGGGTGGCGGTGGTGTTGTTTTACAAGGCGTGGCATGGGGTGAGCGTGTTCTTTCTCTTGCTCATGGAGTCCTTCAGCAATTTGGCGATGACATAAAACTCTATTCTTTTAAGACTACTCCACGTGGATATATTTATATCAGATTAGACAAGCTCTCAAACCAGTATGGGTGTCCTAGCTTGGAGGAACTTGAAAGTTACAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGGGCACTTGGGAATATTCCGGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTCAAGGTCCCAGATGATCTGTCTAGATTTAAAGCCATGCCAATGCGAGTGTGCTACATAGAAGAAGTTGAATCGAGAGGCAATGAAAACGATGCAGTTTTTATGTTGGATCATGTGGAATTGGAATCTGAAAGCTGTGTCTGGAAATTAGCAAATGTAAGGGAAAATCGAGATCCTTTAAGTAAGGGCAGGCCTTTGTCACGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGGAAATCATAAGAAGGTATTCCTTTATCTTGAATGCTGA MSGYKIAHTLLHRARMAAAAAAVGRPASTVFFCGEATSSQSSCSSSARHVHSRREHGFVFSASAFMRLFSTDSSKEFEDGVKEKNPVQYERDDGEETTDGWEEDDDLDPELGDGGGGGGVVLQGVAWGERVLSLAHGVLQQFGDDIKLYSFKTTPRGYIYIRLDKLSNQYGCPSLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLSRFKAMPMRVCYIEEVESRGNENDAVFMLDHVELESESCVWKLANVRENRDPLSKGRPLSRKQKEWRLKLPYGNHKKVFLYLEC Homology
BLAST of Sed0001803 vs. NCBI nr
Match: XP_023541150.1 (uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541151.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541152.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541153.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541154.1 uncharacterized protein LOC111801398 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135 Identity = 251/307 (81.76%), Postives = 275/307 (89.58%), Query Frame = 0
BLAST of Sed0001803 vs. NCBI nr
Match: XP_022967944.1 (uncharacterized protein LOC111467332 isoform X1 [Cucurbita maxima]) HSP 1 Score: 491.9 bits (1265), Expect = 4.0e-135 Identity = 250/307 (81.43%), Postives = 274/307 (89.25%), Query Frame = 0
BLAST of Sed0001803 vs. NCBI nr
Match: KAG7013097.1 (rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 487.3 bits (1253), Expect = 9.9e-134 Identity = 250/307 (81.43%), Postives = 272/307 (88.60%), Query Frame = 0
BLAST of Sed0001803 vs. NCBI nr
Match: XP_022944994.1 (uncharacterized protein LOC111449365 [Cucurbita moschata]) HSP 1 Score: 486.1 bits (1250), Expect = 2.2e-133 Identity = 249/307 (81.11%), Postives = 272/307 (88.60%), Query Frame = 0
BLAST of Sed0001803 vs. NCBI nr
Match: KAG6574039.1 (Serine/threonine-protein kinase dst1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 475.3 bits (1222), Expect = 3.9e-130 Identity = 244/301 (81.06%), Postives = 266/301 (88.37%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy Swiss-Prot
Match: Q72NX1 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rimP PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy Swiss-Prot
Match: Q8F7K3 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=rimP PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-09 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy Swiss-Prot
Match: Q04U33 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rimP PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy Swiss-Prot
Match: Q04ZJ3 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=rimP PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.3e-07 Identity = 42/151 (27.81%), Postives = 74/151 (49.01%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy TrEMBL
Match: A0A6J1HY61 (uncharacterized protein LOC111467332 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467332 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.9e-135 Identity = 250/307 (81.43%), Postives = 274/307 (89.25%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy TrEMBL
Match: A0A6J1FZQ6 (uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC111449365 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 1.1e-133 Identity = 249/307 (81.11%), Postives = 272/307 (88.60%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy TrEMBL
Match: A0A6J1D5R7 (uncharacterized protein LOC111017562 OS=Momordica charantia OX=3673 GN=LOC111017562 PE=3 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.7e-126 Identity = 229/308 (74.35%), Postives = 265/308 (86.04%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy TrEMBL
Match: A0A1S3BF38 (uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 5.5e-122 Identity = 233/309 (75.40%), Postives = 262/309 (84.79%), Query Frame = 0
BLAST of Sed0001803 vs. ExPASy TrEMBL
Match: A0A0A0KW71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606760 PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.4e-117 Identity = 227/305 (74.43%), Postives = 257/305 (84.26%), Query Frame = 0
BLAST of Sed0001803 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 282.0 bits (720), Expect = 5.9e-76 Identity = 143/247 (57.89%), Postives = 186/247 (75.30%), Query Frame = 0
BLAST of Sed0001803 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 178.3 bits (451), Expect = 9.2e-45 Identity = 94/247 (38.06%), Postives = 150/247 (60.73%), Query Frame = 0
BLAST of Sed0001803 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 151.8 bits (382), Expect = 9.2e-37 Identity = 80/149 (53.69%), Postives = 107/149 (71.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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