Sed0001744 (gene) Chayote v1

Overview
NameSed0001744
Typegene
OrganismSechium edule (Chayote v1)
DescriptionYcf54-like protein
LocationLG01: 5832787 .. 5835243 (+)
RNA-Seq ExpressionSed0001744
SyntenySed0001744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGAGTGGGCAAGATAGTAACTTCACATTGTAATAGATAAAGTAGATATTAGATAAGGTTCTCCCACTCTGCTTCTAGATTTTGGTGATTAATTTAGTTAGCCACTCCCCCCATTTTTGCTCTGCTCAAATTCTGCAATCACAATCACAAAACCAATTGCCCAAATGTTCAGCACTGTGAATCTTGTTATGGGCTCTTCTTCACCCGCCATGGTTACTCCATCACAGATTTCAGCCATGAAATCTCTTGCCAGCTCCAGAATCGGTCACCACAACCCCACCGGAACCGTTTCATTGCCTTTCCGTTTCTCTTCTGCCTCCGCCTCCACCGCCGGCGTCTCCTCTTCACCGCGTTTTTTTCCGTTCAGCCCAGCATTCGCCGCCGTTAACTCCGATCCGGCCGACAAGGTAACCGTTAGCTCTCCGTTCCGCATTTCGCCTCTCTACAATTTCTTAACTCCGACGATTATACATCGTTTTTCGAATTTAGGTTTCAATTGATCGATCTATCGAGAGTTAGGGTTTGCAAAATTGCTGACGCTCGTGGAAATCGAAGCGAGATTTTGTGAAATTTTAATAGCGTTGTTGATCCTAATTTGTCTAGTTTGTGTGCGTTTTCCCTATTTCGTTCTGGAAATCTGAGATTGTGTAAGGTGAAGGTCACTGGATTTTTATGCATCGTTTCAATGCAGCAAGAATCGAACAAGTATTACTTCCTCGTTGCAAATGCGAAGTTCATGCTCGACGACGAGGAGCATTTCCAGGAGCAGCTATTCGAGCGGCTTCGCTACTATGGCGAGCGGAACAAGGAGCAGGACTTTTGGTTAGTCATTGAACCTAAATTCTTGGAGAAGTTTCCTAATGTCACCAAGAGATTGCAGAGACCTGCCGTTGCACTTGTTTCAACTAATAGTACTTGGATTAAGTAAGTTACCTGCTTTCAAATTGCATTATTGATTTTCTTTACCATATTACATTATAGATTAGGATTGGAGATTCGAAACTACAACCATACGAGTAGAGACAATACACTAATCTCTAATTATTTGAGTTTTGCTTATTCCTATTAGCATCGTTTGCATTGGTATATGCAGTTCTTGCAGCTCATTGAGGCCTAATTCATTGTTCGCTCGCTTTTCGCTTATATATAAGACTCATATTTGTTCGTAAGGGGTGGCACAATGGTTGAAGACTTGGGCTTTGAGGGTATGCTCTCCTCCCAGGTTCGACACTCTGCTGTGACATTACTCCTTCGATGTCTCCCGGTGCCTAGCCTAGGAACGGGCGTGGTTACCCTTCTTTCAAGAAAAATATCAGACCCATATTTGAGAGGAGACAATAATATGATGTGTTTAGATACAATAAGAAAGAGTAGAAAATATGAGTGTTCTCTATATATATGAACATAGCACTCATATTTAAGAGGAGATAGTAATGTGATATGTTTAGATACAATAAGAAAGTGAATATGAAAAAGTAGGAAATATGAGTGCTTTTATATATATGAATAATAGTACTCATACTTAAGATATAGTAATGTGATGTGTTTAGTCACAATAAAAAAAAGGGATGTGAAAAACTAGAAAAATAAAATGCTTGATATTGCACACAATTGGGCAGCTAACAAGTTTTAAGGACAATTAGAGGATTAAATGAGTCAACAGTTGCTTGTCAAAAAACAAAACAAAACAAAAAATGAGTCAACAACTGCAGTCCATCTTAAGTTTCCAGTGGTTTATTATTTGCATATGCTGACAGAATAACATTTACTCCATAAGTTCTTGGTTTCATTTTTTTTCTTTTTCTTTAGAATTCAAATTTATCTTGTTGTGAAGCTGTTTAGCTACAGTAACTGAAACTCAGCTCTTCCCATGATTACTCCATGTCAAATGCCTCATATTGATGTATGATTTTATACAATCACTGTTAAATGGGCTCGAAACTTGAACATTCTTGCATCTCCTGGAACAATGTCTTTGCTTGACAGCCTATTTTTGTCCCCCTTTTCTTGTTGATATGGGCAGGTTCATGAAGCTCAGACTGGACCGAGTCTTAGCCGAAAGTTTTGAAGCTGATAGCTTAGAAGAAGCATTGGCTTCTAACCCGACCGACATCGAGTTTAAGAAGCCTGAAAAATGGGTAGCTCCCTACCCCAAGTATGAATCTGGATGGTGGGAAACTTTCTTGCCGCCAGTGGCAAAAGCAGAAGCAAAAGTGTAAACTGTGTGTAAGTTTATTTCTTTAGTAGGCTCTTTTACCATCCAAGTATGAATTTTGATGGTGTGAGGATTTGGCAAAACATTTGTAGTTGAAGGCAGTTTTTGGTAATTCTGATGTGGTAAAAGTAAATCGTTATTTTAAGCTTTATTGAAATATACTAGGGCTTTTACAAGGGTAACCTAGTGGTCACCGGTTAAAATGGGCTTAAATAACCAAGAGATTGCGAGTTCAATTCAT

mRNA sequence

GTAGAGTGGGCAAGATAGTAACTTCACATTGTAATAGATAAAGTAGATATTAGATAAGGTTCTCCCACTCTGCTTCTAGATTTTGGTGATTAATTTAGTTAGCCACTCCCCCCATTTTTGCTCTGCTCAAATTCTGCAATCACAATCACAAAACCAATTGCCCAAATGTTCAGCACTGTGAATCTTGTTATGGGCTCTTCTTCACCCGCCATGGTTACTCCATCACAGATTTCAGCCATGAAATCTCTTGCCAGCTCCAGAATCGGTCACCACAACCCCACCGGAACCGTTTCATTGCCTTTCCGTTTCTCTTCTGCCTCCGCCTCCACCGCCGGCGTCTCCTCTTCACCGCGTTTTTTTCCGTTCAGCCCAGCATTCGCCGCCGTTAACTCCGATCCGGCCGACAAGCAAGAATCGAACAAGTATTACTTCCTCGTTGCAAATGCGAAGTTCATGCTCGACGACGAGGAGCATTTCCAGGAGCAGCTATTCGAGCGGCTTCGCTACTATGGCGAGCGGAACAAGGAGCAGGACTTTTGGTTAGTCATTGAACCTAAATTCTTGGAGAAGTTTCCTAATGTCACCAAGAGATTGCAGAGACCTGCCGTTGCACTTGTTTCAACTAATAGTACTTGGATTAAGTTCATGAAGCTCAGACTGGACCGAGTCTTAGCCGAAAGTTTTGAAGCTGATAGCTTAGAAGAAGCATTGGCTTCTAACCCGACCGACATCGAGTTTAAGAAGCCTGAAAAATGGGTAGCTCCCTACCCCAAGTATGAATCTGGATGGTGGGAAACTTTCTTGCCGCCAGTGGCAAAAGCAGAAGCAAAAGTGTAAACTGTGTGTAAGTTTATTTCTTTAGTAGGCTCTTTTACCATCCAAGTATGAATTTTGATGGTGTGAGGATTTGGCAAAACATTTGTAGTTGAAGGCAGTTTTTGGTAATTCTGATGTGGTAAAAGTAAATCGTTATTTTAAGCTTTATTGAAATATACTAGGGCTTTTACAAGGGTAACCTAGTGGTCACCGGTTAAAATGGGCTTAAATAACCAAGAGATTGCGAGTTCAATTCAT

Coding sequence (CDS)

ATGTTCAGCACTGTGAATCTTGTTATGGGCTCTTCTTCACCCGCCATGGTTACTCCATCACAGATTTCAGCCATGAAATCTCTTGCCAGCTCCAGAATCGGTCACCACAACCCCACCGGAACCGTTTCATTGCCTTTCCGTTTCTCTTCTGCCTCCGCCTCCACCGCCGGCGTCTCCTCTTCACCGCGTTTTTTTCCGTTCAGCCCAGCATTCGCCGCCGTTAACTCCGATCCGGCCGACAAGCAAGAATCGAACAAGTATTACTTCCTCGTTGCAAATGCGAAGTTCATGCTCGACGACGAGGAGCATTTCCAGGAGCAGCTATTCGAGCGGCTTCGCTACTATGGCGAGCGGAACAAGGAGCAGGACTTTTGGTTAGTCATTGAACCTAAATTCTTGGAGAAGTTTCCTAATGTCACCAAGAGATTGCAGAGACCTGCCGTTGCACTTGTTTCAACTAATAGTACTTGGATTAAGTTCATGAAGCTCAGACTGGACCGAGTCTTAGCCGAAAGTTTTGAAGCTGATAGCTTAGAAGAAGCATTGGCTTCTAACCCGACCGACATCGAGTTTAAGAAGCCTGAAAAATGGGTAGCTCCCTACCCCAAGTATGAATCTGGATGGTGGGAAACTTTCTTGCCGCCAGTGGCAAAAGCAGAAGCAAAAGTGTAA

Protein sequence

MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSSSPRFFPFSPAFAAVNSDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV
Homology
BLAST of Sed0001744 vs. NCBI nr
Match: XP_022149576.1 (uncharacterized protein LOC111017973 [Momordica charantia])

HSP 1 Score: 339.0 bits (868), Expect = 3.2e-89
Identity = 180/233 (77.25%), Postives = 197/233 (84.55%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTA---- 60
           M  TVNLVMGSSS AMVTP+Q +A+KSLAS+R  HH    T+SLP  F++AS ST+    
Sbjct: 1   MLGTVNLVMGSSSAAMVTPAQFAAVKSLASARASHHTHCRTLSLPLGFANASGSTSCFLP 60

Query: 61  GVSSSPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFE 120
              SSP   PFS A AAVN      SDPADKQE+NKYYFLVANAKFMLD+EEHF+E LFE
Sbjct: 61  SRGSSPS-SPFSTAIAAVNSNQLVSSDPADKQEANKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLA 180
           RLRYYGERNKEQDFWLVIEPKFLEKFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLA
Sbjct: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           ES+EA+S EEA+ASNPT+IEF+KPEKWVAPYPKYE GWWETFLPPV KAEAKV
Sbjct: 181 ESYEANSFEEAMASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 232

BLAST of Sed0001744 vs. NCBI nr
Match: XP_038900405.1 (uncharacterized protein LOC120087636 [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 4.8e-85
Identity = 170/226 (75.22%), Postives = 190/226 (84.07%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TVNLVMGSSS AM TP+  +A+KSLASSRIG+H+   T+SLP    S+S S++   S
Sbjct: 1   MLGTVNLVMGSSSAAMATPTHCTAVKSLASSRIGYHSHCRTISLPLGLPSSSISSSCFLS 60

Query: 61  SP---RFFPFSPAFAAVNSDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFERLRYYGE 120
            P      PF+   AAVNSD ADKQESNKYYF+VANAKFMLD+EEHF+E LFERLR YGE
Sbjct: 61  PPGSSLSSPFNTEIAAVNSDSADKQESNKYYFVVANAKFMLDEEEHFKELLFERLRNYGE 120

Query: 121 RNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAESFEADS 180
           RNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLAES+EA+S
Sbjct: 121 RNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESYEANS 180

Query: 181 LEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           LEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPV KAEAKV
Sbjct: 181 LEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVTKAEAKV 226

BLAST of Sed0001744 vs. NCBI nr
Match: XP_022944632.1 (uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo] >XP_023512537.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-84
Identity = 175/232 (75.43%), Postives = 192/232 (82.76%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TVNLVMGSSS AM TP+Q +A+KSLASS+IG HN   T SLP   +SAS S+A  SS
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  ---SPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFER 120
              S     F+ A AAVN      SD ADK+ESNKYYFLVANAKFMLD+EEHF+E LFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAE 180
           LR YGERNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           S+EA+SLEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPVAKAEAKV
Sbjct: 181 SYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 232

BLAST of Sed0001744 vs. NCBI nr
Match: XP_022986936.1 (uncharacterized protein LOC111484525 [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 4.0e-84
Identity = 174/233 (74.68%), Postives = 191/233 (81.97%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGV-- 60
           M  TVNLVMGSSS AM TP+Q +A+KSLASS+IG HN   T SLP   +SAS S++    
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSSFFLS 60

Query: 61  --SSSPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFE 120
              SS  F  F  A AAVN      SD ADK+ESNKYYFLVANAKFMLD+EEHF+E LFE
Sbjct: 61  HRGSSLSFLRFKTAVAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLA 180
           RLR YGERNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLA
Sbjct: 121 RLRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           ES+EA+SLEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPVAKAEAKV
Sbjct: 181 ESYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 233

BLAST of Sed0001744 vs. NCBI nr
Match: KAG7010462.1 (putative protein ycf54 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.1 bits (819), Expect = 1.5e-83
Identity = 173/232 (74.57%), Postives = 190/232 (81.90%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TVNLVMGSSS AM TP+Q +A+KSLASS+IG HN   T SLP   +SAS S+A  SS
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  ---SPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFER 120
              S     F+ A AAVN      SD  DK+ESNKYYFLVANAKFMLD+EEHF+E LFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSTDKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAE 180
           LR YGERNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           S+EA+SLEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPVAK EAKV
Sbjct: 181 SYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKTEAKV 232

BLAST of Sed0001744 vs. ExPASy Swiss-Prot
Match: P72777 (Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1780 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 0

Query: 87  YYFLVANAKFMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRP 146
           YY+ +A+ KF+L +EE F+E L ER R YGE+NKE DFW VI+P FL        + + P
Sbjct: 31  YYYALASQKFLL-EEEPFEEVLKERRRDYGEKNKEIDFWQVIQPAFLNAPELAEAKAKAP 90

Query: 147 A--VALVSTNSTWIKFMKLRLDRVLAESFEA--DSLEEALAS 185
              VA+VSTN ++I ++KLRL+ VL   FEA  D++ + LAS
Sbjct: 91  EKNVAIVSTNKSFIVWVKLRLEYVLTGEFEAPSDAIPDPLAS 131

BLAST of Sed0001744 vs. ExPASy Swiss-Prot
Match: P51204 (Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-11
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0

Query: 87  YYFLVANAKFMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVTK---RL 146
           YYF +A+  F+L  EE  +E   ER+ YY   NKE DFWL+  PKFL K P + K    +
Sbjct: 4   YYFALASQNFLL-SEEPLEEVFRERINYYQSNNKEIDFWLIPNPKFLNK-PAMIKFKNLV 63

Query: 147 QRPAVALVSTNSTWIKFMKLRLDRVLAESFEADSLE 180
              A+A++STNS +I ++KLR+  V    FE DSL+
Sbjct: 64  PNEAIAIISTNSIFINWLKLRIGYVCIGQFE-DSLK 96

BLAST of Sed0001744 vs. ExPASy Swiss-Prot
Match: Q1XDT3 (Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-09
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 0

Query: 87  YYFLVANAKFMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVTKR--LQ 146
           YYF +A+  F+L  +E  +E   ER+ YY   NK  DFWL+  P FLEK   ++ +  + 
Sbjct: 4   YYFALASQNFLL-VQEPLEEVFRERVNYYQSNNKAIDFWLIPNPSFLEKPEMISFKNLVP 63

Query: 147 RPAVALVSTNSTWIKFMKLRLDRVLAESFEADSLE 180
           + AVA++STN  +I ++KLR+  +    FE D+L+
Sbjct: 64  KDAVAIISTNPIFINWLKLRIGYICIGQFE-DNLQ 96

BLAST of Sed0001744 vs. ExPASy Swiss-Prot
Match: O19890 (Uncharacterized protein ycf54 OS=Cyanidium caldarium OX=2771 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-06
Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 0

Query: 81  KQESNKYYFLVANAKFMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVT 140
           K + N YY++ A +K  L  EE  +E L E+  ++   NK  DFW+    K     PN  
Sbjct: 2   KADYNTYYYIAA-SKHFLTQEEPLEEILREKTEHFIANNKSIDFWIFDSTKLNAHSPNEI 61

Query: 141 KRLQR----PAVALVSTNSTWIKFMKLRLDRVLAESFE 175
           K LQ+    P + ++S+N  +I ++KLRL  +  +  +
Sbjct: 62  KTLQKTFFFPTILIISSNKKFITWLKLRLRYIFTDKIQ 98

BLAST of Sed0001744 vs. ExPASy TrEMBL
Match: A0A6J1D8T3 (uncharacterized protein LOC111017973 OS=Momordica charantia OX=3673 GN=LOC111017973 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.5e-89
Identity = 180/233 (77.25%), Postives = 197/233 (84.55%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTA---- 60
           M  TVNLVMGSSS AMVTP+Q +A+KSLAS+R  HH    T+SLP  F++AS ST+    
Sbjct: 1   MLGTVNLVMGSSSAAMVTPAQFAAVKSLASARASHHTHCRTLSLPLGFANASGSTSCFLP 60

Query: 61  GVSSSPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFE 120
              SSP   PFS A AAVN      SDPADKQE+NKYYFLVANAKFMLD+EEHF+E LFE
Sbjct: 61  SRGSSPS-SPFSTAIAAVNSNQLVSSDPADKQEANKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLA 180
           RLRYYGERNKEQDFWLVIEPKFLEKFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLA
Sbjct: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           ES+EA+S EEA+ASNPT+IEF+KPEKWVAPYPKYE GWWETFLPPV KAEAKV
Sbjct: 181 ESYEANSFEEAMASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 232

BLAST of Sed0001744 vs. ExPASy TrEMBL
Match: A0A6J1FW50 (uncharacterized protein LOC111449035 OS=Cucurbita moschata OX=3662 GN=LOC111449035 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.7e-85
Identity = 175/232 (75.43%), Postives = 192/232 (82.76%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TVNLVMGSSS AM TP+Q +A+KSLASS+IG HN   T SLP   +SAS S+A  SS
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  ---SPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFER 120
              S     F+ A AAVN      SD ADK+ESNKYYFLVANAKFMLD+EEHF+E LFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAE 180
           LR YGERNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           S+EA+SLEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPVAKAEAKV
Sbjct: 181 SYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 232

BLAST of Sed0001744 vs. ExPASy TrEMBL
Match: A0A6J1JCP0 (uncharacterized protein LOC111484525 OS=Cucurbita maxima OX=3661 GN=LOC111484525 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84
Identity = 174/233 (74.68%), Postives = 191/233 (81.97%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGV-- 60
           M  TVNLVMGSSS AM TP+Q +A+KSLASS+IG HN   T SLP   +SAS S++    
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSSFFLS 60

Query: 61  --SSSPRFFPFSPAFAAVN------SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFE 120
              SS  F  F  A AAVN      SD ADK+ESNKYYFLVANAKFMLD+EEHF+E LFE
Sbjct: 61  HRGSSLSFLRFKTAVAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLA 180
           RLR YGERNKEQDFWLVIEPKFL+KFPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLA
Sbjct: 121 RLRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           ES+EA+SLEEALAS PT++EF+KPEKWVAPY KYE GWWE FLPPVAKAEAKV
Sbjct: 181 ESYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 233

BLAST of Sed0001744 vs. ExPASy TrEMBL
Match: A0A6J1G6K2 (uncharacterized protein LOC111451246 OS=Cucurbita moschata OX=3662 GN=LOC111451246 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 168/227 (74.01%), Postives = 189/227 (83.26%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TVNLVMGSSS AM+T +Q +AMKSLAS RIGHH+    +SLP    SAS  ++   +
Sbjct: 1   MLGTVNLVMGSSSAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60

Query: 61  SPRFFPFSPAFAAVN-----SDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFERLRYY 120
           S    PF+ A AAVN     SD AD+QESNKYYF+VANAKFMLD+EEHF+E LFERLRYY
Sbjct: 61  SRGSSPFNTAIAAVNDQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLRYY 120

Query: 121 GERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAESFEA 180
            ER+KEQDFWLVIEPKFLE+FPN+TKRLQRPAVALVSTNSTWI FMKLRLDRVLAES+EA
Sbjct: 121 AERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESYEA 180

Query: 181 DSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAK 223
           DSLE+ALASNPT+IEF+KPEKWVAPYPKYE GWWE FLPPV K EA+
Sbjct: 181 DSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE 227

BLAST of Sed0001744 vs. ExPASy TrEMBL
Match: A0A0A0KB63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133820 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 162/226 (71.68%), Postives = 184/226 (81.42%), Query Frame = 0

Query: 1   MFSTVNLVMGSSSPAMVTPSQISAMKSLASSRIGHHNPTGTVSLPFRFSSASASTAGVSS 60
           M  TV+LVMGSSS A+ T +   A+KSL +SRIGHHN   T+S PF   S S  T+   S
Sbjct: 1   MLGTVSLVMGSSSAAVATSTHFPALKSLPTSRIGHHNHFPTLSFPFVLPSTSIFTSSFLS 60

Query: 61  SP---RFFPFSPAFAAVNSDPADKQESNKYYFLVANAKFMLDDEEHFQEQLFERLRYYGE 120
           SP      PF+ A AAVNSD ADKQESNKYYFLVANAKFMLD+EEHF+E LFERLR + E
Sbjct: 61  SPLSSLSSPFNTAIAAVNSDSADKQESNKYYFLVANAKFMLDEEEHFKELLFERLRNFSE 120

Query: 121 RNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNSTWIKFMKLRLDRVLAESFEADS 180
           RNKEQ+FWLVIEPKFL+KFPN+TKRL+RPAVALVST+STWI FMKLRLDRVLAES+EA+S
Sbjct: 121 RNKEQNFWLVIEPKFLDKFPNITKRLRRPAVALVSTDSTWITFMKLRLDRVLAESYEANS 180

Query: 181 LEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPPVAKAEAKV 224
           +EEALAS PT++EF+KPE WVAPY KYE GWWE FLPP  KAEAKV
Sbjct: 181 IEEALASTPTNLEFEKPENWVAPYSKYEYGWWEAFLPPATKAEAKV 226

BLAST of Sed0001744 vs. TAIR 10
Match: AT5G58250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60
Identity = 120/186 (64.52%), Postives = 140/186 (75.27%), Query Frame = 0

Query: 36  HNPTGTVSLPFRFSSASASTAGVSSSPRFFPFSPAFAAVNSDPADKQESNKYYFLVANAK 95
           H  + ++SLP    S+S  TA  S   +        ++VN     K ES KY+FLVANAK
Sbjct: 38  HLSSPSLSLPSSHFSSSFKTAATSIEQQ--------SSVN-----KGESTKYHFLVANAK 97

Query: 96  FMLDDEEHFQEQLFERLRYYGERNKEQDFWLVIEPKFLEKFPNVTKRLQRPAVALVSTNS 155
           FMLD+EEHFQEQLFERLRY+GER   QDFWLVIEPKFL+ FP +T+RL+RPAVALVSTN 
Sbjct: 98  FMLDEEEHFQEQLFERLRYFGERELVQDFWLVIEPKFLDNFPKITQRLRRPAVALVSTNG 157

Query: 156 TWIKFMKLRLDRVLAESFEADSLEEALASNPTDIEFKKPEKWVAPYPKYESGWWETFLPP 215
           TWI FMKLRLDRVL +SFEA SL+EALASNPT +EF KP+ WVAPYPKYE GWW+TFLP 
Sbjct: 158 TWITFMKLRLDRVLYDSFEATSLDEALASNPTTLEFDKPKNWVAPYPKYEPGWWDTFLPK 210

Query: 216 VAKAEA 222
           V +  A
Sbjct: 218 VTQESA 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022149576.13.2e-8977.25uncharacterized protein LOC111017973 [Momordica charantia][more]
XP_038900405.14.8e-8575.22uncharacterized protein LOC120087636 [Benincasa hispida][more]
XP_022944632.11.8e-8475.43uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 unchar... [more]
XP_022986936.14.0e-8474.68uncharacterized protein LOC111484525 [Cucurbita maxima][more]
KAG7010462.11.5e-8374.57putative protein ycf54 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
P727773.5e-1448.04Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN... [more]
P512046.2e-1144.79Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1[more]
Q1XDT35.8e-0938.95Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1[more]
O198902.7e-0631.63Uncharacterized protein ycf54 OS=Cyanidium caldarium OX=2771 GN=ycf54 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1D8T31.5e-8977.25uncharacterized protein LOC111017973 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1FW508.7e-8575.43uncharacterized protein LOC111449035 OS=Cucurbita moschata OX=3662 GN=LOC1114490... [more]
A0A6J1JCP01.9e-8474.68uncharacterized protein LOC111484525 OS=Cucurbita maxima OX=3661 GN=LOC111484525... [more]
A0A6J1G6K21.6e-8374.01uncharacterized protein LOC111451246 OS=Cucurbita moschata OX=3662 GN=LOC1114512... [more]
A0A0A0KB635.9e-8171.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133820 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G58250.12.5e-6064.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038409Ycf54-like superfamilyGENE3D3.30.70.1860Uncharacterised protein family Ycf54coord: 84..196
e-value: 3.1E-39
score: 135.3
IPR019616Ycf54 proteinPFAMPF10674Ycf54coord: 86..175
e-value: 1.3E-34
score: 118.3
IPR019616Ycf54 proteinPANTHERPTHR35319FAMILY NOT NAMEDcoord: 41..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001744.1Sed0001744.1mRNA