Sed0001716 (gene) Chayote v1

Overview


Name	Sed0001716
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chalcone synthase
Location	LG11: 2915072 .. 2916113 (+)
RNA-Seq Expression	Sed0001716
Synteny	Sed0001716

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTAAGTTGGCGCACGTTGGGATTGCTGGTTGCACGTGTCTGCAGTGAGGACATGCGAGGCGTGGCCGAAACGGCGCTGAGCTACGCGGCCGTGGTGCAGGCGAACACGAACTCGACCGGATCGTGCGAGGATGACGGCACCGGCGTTGGTGGCAAGGCGGCGTCGCCGCGGCTTGCGTGTCTGCTGCTTATGCGAGAGGGGATGTCGCGCGTGGGAGCTGCGGTGTGCAATGGTGTTGGCGCAAATGGCTCGGCCTCGAGCGGCGGGCGGTGCGACGCAGATTCTTTATCTTTGCGTCGGGGACATCGTGGGTGGTGGAGGTGCCGGCCGGGAAGGAGGCGGCGCGGCGGCCATCAAGGAGTGGGGGCCGCCAAGTCCGAGATCACGCACCTCGTCTTCGCACCACCTCCGGCGTCGACATGCCCGCGCGCCGACTACCAGCTCATGAAGCTCCTCGCCCTCCGCCCCTCCGTCAAGCGCTACATGATGTACCAAAGGGCTGCCACGCCGCGCACCGTCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCTCGCGTCCTCGTTGTGTGCTCCGAGATCACCGCCGTCACCTTCCGCGGCCCCTCTGAGACTCACTTGGATTCTATGGTCGGACAGGTAAAGCCTAAACCCGTATCTATTTAGAGAAATATTTACATCATACCCAGTTTTATGTATAAAATAATGCTCATTTATGTGACCTAATATGATCAACAATTTATTTTTGTTTATTTTATTACTTTTATCTTTGCAGCCAAGTTCCTGTGGCTCTCGACGGTGATGGGCGGCGGAGGTCGGGATTGAAGATGGCGGCAAGAGGCAGCAGGTGGAGGGGTGAGGGCTAGGGTAAAGAAGAGACACTTTAGGATTTTTCTTTTCTTTTGCCTTTTTTTTAAACAAATAAATGGGTCATTGATTTAAAATTCCAGTTTTTCTTTCAAAACTCTTTAAATGAGTTTCTTTTTTTTAATAGTCTTCTCTTTTAAAATTTAAAACCAAAAGATAA

mRNA sequence

ATGAGTGTAAGTTGGCGCACGTTGGGATTGCTGGTTGCACGTGTCTGCAGTGAGGACATGCGAGGCGTGGCCGAAACGGCGCTGAGCTACGCGGCCGTGGTGCAGGCGAACACGAACTCGACCGGATCGTGCGAGGATGACGGCACCGGCGTTGGTGGCAAGGCGGCGTCGCCGCGGCTTGCGTGTCTGCTGCTTATGCGAGAGGGGATGTCGCGCGTGGGAGCTGCGGTGTGCAATGGTGTTGGCGCAAATGGCTCGGCCTCGAGCGGCGGGCGGTGCGACGCAGATTCTTTATCTTTGCGTCGGGGACATCGTGGGTGGTGGAGGTGCCGGCCGGGAAGGAGGCGGCGCGGCGGCCATCAAGGAGTGGGGGCCGCCAAGTCCGAGATCACGCACCTCGTCTTCGCACCACCTCCGGCGTCGACATGCCCGCGCGCCGACTACCAGCTCATGAAGCTCCTCGCCCTCCGCCCCTCCGTCAAGCGCTACATGATGTACCAAAGGGCTGCCACGCCGCGCACCGTCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCTCGCGTCCTCGTTGTGTGCTCCGAGATCACCGCCGTCACCTTCCGCGGCCCCTCTGAGACTCACTTGGATTCTATGGTCGGACAGTCTTCTCTTTTAAAATTTAAAACCAAAAGATAA

Coding sequence (CDS)

ATGAGTGTAAGTTGGCGCACGTTGGGATTGCTGGTTGCACGTGTCTGCAGTGAGGACATGCGAGGCGTGGCCGAAACGGCGCTGAGCTACGCGGCCGTGGTGCAGGCGAACACGAACTCGACCGGATCGTGCGAGGATGACGGCACCGGCGTTGGTGGCAAGGCGGCGTCGCCGCGGCTTGCGTGTCTGCTGCTTATGCGAGAGGGGATGTCGCGCGTGGGAGCTGCGGTGTGCAATGGTGTTGGCGCAAATGGCTCGGCCTCGAGCGGCGGGCGGTGCGACGCAGATTCTTTATCTTTGCGTCGGGGACATCGTGGGTGGTGGAGGTGCCGGCCGGGAAGGAGGCGGCGCGGCGGCCATCAAGGAGTGGGGGCCGCCAAGTCCGAGATCACGCACCTCGTCTTCGCACCACCTCCGGCGTCGACATGCCCGCGCGCCGACTACCAGCTCATGAAGCTCCTCGCCCTCCGCCCCTCCGTCAAGCGCTACATGATGTACCAAAGGGCTGCCACGCCGCGCACCGTCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACCGCGGCGCTCGCGTCCTCGTTGTGTGCTCCGAGATCACCGCCGTCACCTTCCGCGGCCCCTCTGAGACTCACTTGGATTCTATGGTCGGACAGTCTTCTCTTTTAAAATTTAAAACCAAAAGATAA

Protein sequence

MSVSWRTLGLLVARVCSEDMRGVAETALSYAAVVQANTNSTGSCEDDGTGVGGKAASPRLACLLLMREGMSRVGAAVCNGVGANGSASSGGRCDADSLSLRRGHRGWWRCRPGRRRRGGHQGVGAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQSSLLKFKTKR

Homology

[Close]

BLAST of Sed0001716 vs. NCBI nr
Match: XP_038892343.1 (chalcone synthase 2 [Benincasa hispida])

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL+KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 119 GQPKSKITHLIFCTTSGVDMPGADYQLLKLLGLRPSVKRYMMYQQGCFAGATVLRLAKDL 178

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQ+
Sbjct: 179 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQA 214

[Close]

BLAST of Sed0001716 vs. NCBI nr
Match: CDU44814.1 (chalcone synthase, partial [Capsella rubella])

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-29
Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 119 GHQGVGAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLR 178
           GHQGVG+ KS+ITH+V         P ADYQL KLL LRPSVKR MMYQ+       VLR
Sbjct: 33  GHQGVGSXKSKITHVVXCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLR 92

Query: 179 LAKDLAENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           +AKDLAENNRGARVLVVCSEITAVTFRGPS+THLDS+VGQ+
Sbjct: 93  IAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQA 133

[Close]

BLAST of Sed0001716 vs. NCBI nr
Match: XP_022983281.1 (chalcone synthase 2 [Cucurbita maxima])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQLMKLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLVFCTTSGVDMPGADYQLMKLLGLRPSVKRYMMYQQGCYAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITA+TFRGPSETHLDSMVGQ+
Sbjct: 178 AENNKGARVLVVCSEITAITFRGPSETHLDSMVGQA 213

[Close]

BLAST of Sed0001716 vs. NCBI nr
Match: XP_022934336.1 (chalcone synthase 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQLMKLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLVFCTTSGVDMPGADYQLMKLLGLRPSVKRYMMYQQGCYAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITA+TFRGPSETHLDSMVGQ+
Sbjct: 178 AENNKGARVLVVCSEITAITFRGPSETHLDSMVGQA 213

[Close]

BLAST of Sed0001716 vs. NCBI nr
Match: XP_023528253.1 (chalcone synthase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 3.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQLMKLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLVFCTTSGVDMPGADYQLMKLLGLRPSVKRYMMYQQGCYAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITA+TFRGPSETHLDSMVGQ+
Sbjct: 178 AENNKGARVLVVCSEITAITFRGPSETHLDSMVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot
Match: O04220 (Chalcone synthase OS=Chrysosplenium americanum OX=36749 GN=CHS PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.2e-31
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQL KLL LRPSVKR MMYQ+   P   VLRLAKDL
Sbjct: 121 GQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFPGGTVLRLAKDL 180

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENNRGARVLVVCSEITAVTFRGPS+THLDS+VGQ+
Sbjct: 181 AENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQA 216

[Close]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot
Match: P24826 (Chalcone synthase 1 OS=Glycine max OX=3847 GN=CHS1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-30
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITAVTFRGP++THLDS+VGQ+
Sbjct: 178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot
Match: P17957 (Chalcone synthase 2 OS=Glycine max OX=3847 GN=CHS2 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-30
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITAVTFRGP++THLDS+VGQ+
Sbjct: 178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot
Match: P19168 (Chalcone synthase 3 OS=Glycine max OX=3847 GN=CHS3 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-30
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITAVTFRGP++THLDS+VGQ+
Sbjct: 178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot
Match: P48406 (Chalcone synthase 5 OS=Glycine max OX=3847 GN=CHS5 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-30
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITAVTFRGP++THLDS+VGQ+
Sbjct: 178 AENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy TrEMBL
Match: A0A173QN93 (Chalcone synthase (Fragment) OS=Capsella rubella OX=81985 GN=chs PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-29
Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 119 GHQGVGAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLR 178
           GHQGVG+ KS+ITH+V         P ADYQL KLL LRPSVKR MMYQ+       VLR
Sbjct: 33  GHQGVGSXKSKITHVVXCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLR 92

Query: 179 LAKDLAENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           +AKDLAENNRGARVLVVCSEITAVTFRGPS+THLDS+VGQ+
Sbjct: 93  IAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQA 133

[Close]

BLAST of Sed0001716 vs. ExPASy TrEMBL
Match: A0A5A7TZX5 (Chalcone synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00200 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL+KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 119 GQPKSKITHLIFCTTSGVDMPGADYQLLKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 178

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQ+
Sbjct: 179 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQA 214

[Close]

BLAST of Sed0001716 vs. ExPASy TrEMBL
Match: A0A6J1J1P2 (chalcone synthase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481906 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQLMKLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLVFCTTSGVDMPGADYQLMKLLGLRPSVKRYMMYQQGCYAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITA+TFRGPSETHLDSMVGQ+
Sbjct: 178 AENNKGARVLVVCSEITAITFRGPSETHLDSMVGQA 213

[Close]

BLAST of Sed0001716 vs. ExPASy TrEMBL
Match: A0A0A0LDT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600020 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHL+F        P ADYQL+KLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 119 GQPKSKITHLIFCTTSGVDMPGADYQLLKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDL 178

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQ+
Sbjct: 179 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQA 214

[Close]

BLAST of Sed0001716 vs. ExPASy TrEMBL
Match: A0A6J1F1I9 (chalcone synthase 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITHLVF        P ADYQLMKLL LRPSVKRYMMYQ+       VLRLAKDL
Sbjct: 118 GQPKSKITHLVFCTTSGVDMPGADYQLMKLLGLRPSVKRYMMYQQGCYAGGTVLRLAKDL 177

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENN+GARVLVVCSEITA+TFRGPSETHLDSMVGQ+
Sbjct: 178 AENNKGARVLVVCSEITAITFRGPSETHLDSMVGQA 213

[Close]

BLAST of Sed0001716 vs. TAIR 10
Match: AT5G13930.1 (Chalcone and stilbene synthase family protein )

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-31
Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G  KS+ITH+VF        P ADYQL KLL LRPSVKR MMYQ+       VLR+AKDL
Sbjct: 123 GQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDL 182

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVGQS 220
           AENNRGARVLVVCSEITAVTFRGPS+THLDS+VGQ+
Sbjct: 183 AENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQA 218

[Close]

BLAST of Sed0001716 vs. TAIR 10
Match: AT4G34850.1 (Chalcone and stilbene synthase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-10
Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G + S+ITH+V+     +  P  D  L K L L P   R ++Y    +     LR+AKD+
Sbjct: 120 GRSISDITHVVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDI 179

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVG 218
           AENN G+RVL+  SE T + F+ PS      +VG
Sbjct: 180 AENNPGSRVLLATSETTIIGFKPPSVDRPYDLVG 213

[Close]

BLAST of Sed0001716 vs. TAIR 10
Match: AT4G00040.1 (Chalcone and stilbene synthase family protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G A  +ITHLV+        P  D  L   L L   V+R M+Y          LR+AKD+
Sbjct: 119 GRAVEDITHLVYVSSSEFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDI 178

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVG 218
           AENN G+RVL+  SE T + FR P++    ++VG
Sbjct: 179 AENNPGSRVLLTTSETTVLGFRPPNKARPYNLVG 212

[Close]

BLAST of Sed0001716 vs. TAIR 10
Match: AT1G02050.1 (Chalcone and stilbene synthase family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 0


Query: 124 GAAKSEITHLVFAPPPASTCPRADYQLMKLLALRPSVKRYMMYQRAATPRTVVLRLAKDL 183
           G    +ITH+V+        P  D  L   L LR  V R M+Y          LR+AKD+
Sbjct: 126 GRPVEDITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDI 185

Query: 184 AENNRGARVLVVCSEITAVTFRGPSETHLDSMVG 218
           AENN G+RVL+  SE T + FR P++     +VG
Sbjct: 186 AENNPGSRVLLTTSETTILGFRPPNKARPYDLVG 219

The following BLAST results are available for this feature:

BLAST of Sed0001716 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892343.1	2.2e-29	75.00	chalcone synthase 2 [Benincasa hispida]	[more]
CDU44814.1	2.2e-29	71.29	chalcone synthase, partial [Capsella rubella]	[more]
XP_022983281.1	3.8e-29	75.00	chalcone synthase 2 [Cucurbita maxima]	[more]
XP_022934336.1	3.8e-29	75.00	chalcone synthase 2 isoform X2 [Cucurbita moschata]	[more]
XP_023528253.1	3.8e-29	75.00	chalcone synthase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0001716 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04220	4.2e-31	73.96	Chalcone synthase OS=Chrysosplenium americanum OX=36749 GN=CHS PE=2 SV=1	[more]
P24826	2.7e-30	70.83	Chalcone synthase 1 OS=Glycine max OX=3847 GN=CHS1 PE=1 SV=1	[more]
P17957	2.7e-30	70.83	Chalcone synthase 2 OS=Glycine max OX=3847 GN=CHS2 PE=3 SV=1	[more]
P19168	2.7e-30	70.83	Chalcone synthase 3 OS=Glycine max OX=3847 GN=CHS3 PE=3 SV=1	[more]
P48406	2.7e-30	70.83	Chalcone synthase 5 OS=Glycine max OX=3847 GN=CHS5 PE=3 SV=1	[more]

BLAST of Sed0001716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A173QN93	1.1e-29	71.29	Chalcone synthase (Fragment) OS=Capsella rubella OX=81985 GN=chs PE=3 SV=1	[more]
A0A5A7TZX5	1.8e-29	75.00	Chalcone synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G...	[more]
A0A6J1J1P2	1.8e-29	75.00	chalcone synthase 2 OS=Cucurbita maxima OX=3661 GN=LOC111481906 PE=3 SV=1	[more]
A0A0A0LDT8	1.8e-29	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G600020 PE=3 SV=1	[more]
A0A6J1F1I9	1.8e-29	75.00	chalcone synthase 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=...	[more]

BLAST of Sed0001716 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13930.1	9.6e-31	70.83	Chalcone and stilbene synthase family protein	[more]
AT4G34850.1	2.5e-10	38.30	Chalcone and stilbene synthase family protein	[more]
AT4G00040.1	9.3e-10	39.36	Chalcone and stilbene synthase family protein	[more]
AT1G02050.1	1.2e-09	38.30	Chalcone and stilbene synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001099	Chalcone/stilbene synthase, N-terminal	PFAM	PF00195	Chal_sti_synt_N	coord: 124..219 e-value: 1.0E-34 score: 119.9
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 121..221 e-value: 3.6E-22 score: 80.9
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 124..218
None	No IPR available	PANTHER	PTHR11877:SF64	CHALCONE SYNTHASE 2	coord: 123..219
IPR011141	Polyketide synthase, type III	PANTHER	PTHR11877	HYDROXYMETHYLGLUTARYL-COA SYNTHASE	coord: 123..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001716.1	Sed0001716.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0030639	polyketide biosynthetic process
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0102128	chalcone synthase activity
molecular_function	GO:0016210	naringenin-chalcone synthase activity
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups