Homology
BLAST of Sed0001671 vs. NCBI nr
Match:
XP_023540099.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 966.5 bits (2497), Expect = 9.5e-278
Identity = 461/524 (87.98%), Postives = 499/524 (95.23%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN ++W R+ S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1 MNGLHWRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVFLWNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFLWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIM+FHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMIFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSY+IK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYIIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY +MEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYERMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. NCBI nr
Match:
XP_022971604.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 963.8 bits (2490), Expect = 6.2e-277
Identity = 463/524 (88.36%), Postives = 498/524 (95.04%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN +Y R+ S+ QP FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1 MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. NCBI nr
Match:
KAG6596261.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 959.1 bits (2478), Expect = 1.5e-275
Identity = 460/524 (87.79%), Postives = 497/524 (94.85%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN +Y R+ S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1 MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. NCBI nr
Match:
XP_022942131.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata] >KAG7027809.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 958.0 bits (2475), Expect = 3.4e-275
Identity = 459/524 (87.60%), Postives = 497/524 (94.85%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN +Y R+ S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSV+ELHA
Sbjct: 1 MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. NCBI nr
Match:
XP_038905146.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 933.7 bits (2412), Expect = 6.8e-268
Identity = 445/521 (85.41%), Postives = 486/521 (93.28%), Query Frame = 0
Query: 7 LCRR-----SSKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQII 66
LCRR +S+NQP FR LRS F+DRSS +Y+RDSYDYTKLL HCRTIRSVQ LHAQII
Sbjct: 4 LCRRTPQALASRNQPCFRLLRSFFSDRSSGKYHRDSYDYTKLLDHCRTIRSVQGLHAQII 63
Query: 67 VEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEA 126
VEG DQNGFLATKLIG+Y EHGE KMGIARKVFD+LL+RDVF+WNVVIQGYAN GPF EA
Sbjct: 64 VEGQDQNGFLATKLIGKYVEHGESKMGIARKVFDKLLQRDVFVWNVVIQGYANLGPFVEA 123
Query: 127 LNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISF 186
LNLFDEMR+SG PTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFV NA+I+F
Sbjct: 124 LNLFDEMRVSGAPTNRYTFPFVLKACGAMKNSDKGKIVHGHVLKCGLDLDLFVSNALIAF 183
Query: 187 YAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 246
YAKC+DVETAR+VFDEMS+RDIVSWNSMI+GYT N KV++AIMLFHAMLHNQ+ CSPD+A
Sbjct: 184 YAKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNEKVEDAIMLFHAMLHNQSACSPDSA 243
Query: 247 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 306
TL+ ILPACVTKSASQVGFWVHSYVIK+GM+VGA LGSCLIS+YANCGHVNIARDVF+R+
Sbjct: 244 TLLGILPACVTKSASQVGFWVHSYVIKTGMEVGAQLGSCLISVYANCGHVNIARDVFNRI 303
Query: 307 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 366
DDKNVIVWSAIIRCYGMHGFA+E+LNMFT LEE GLKPDGV+FLNLLSTCSHAGLIAKG
Sbjct: 304 DDKNVIVWSAIIRCYGMHGFADEALNMFTRLEEAGLKPDGVLFLNLLSTCSHAGLIAKGH 363
Query: 367 EIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH 426
EIY KME YGVERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH
Sbjct: 364 EIYEKMEGYGVERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH 423
Query: 427 NNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSS 486
NI+LAKE+GEKLF+LD +NAGRY+ILASMYEDAGQWEDAAKLRKLLRDRN+RKP+GCSS
Sbjct: 424 KNIELAKEIGEKLFILDSQNAGRYMILASMYEDAGQWEDAAKLRKLLRDRNVRKPVGCSS 483
Query: 487 IEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
IE+DR+HHVFGK+DE+HPFTEQIFDTLEKLE IM+ DFE I
Sbjct: 484 IEVDRIHHVFGKEDETHPFTEQIFDTLEKLESIMEADFEPI 524
BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 365.5 bits (937), Expect = 9.7e-100
Identity = 175/477 (36.69%), Postives = 293/477 (61.43%), Query Frame = 0
Query: 46 HCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLW 105
H ++ +H I+ G DQ+ FLATKLIG Y++ G + ARKVFD+ +R +++W
Sbjct: 89 HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148
Query: 106 NVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGA----MKNLDKGKIVHG 165
N + + G E L L+ +M G ++R+T+ +VLKAC A + +L KGK +H
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208
Query: 166 HVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDE 225
H+ + G +++ ++ YA+ V+ A VF M +R++VSW++MI+ Y NGK E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268
Query: 226 AIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCL 285
A+ F M+ SP++ T+V++L AC + +A + G +H Y+++ G+D P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328
Query: 286 ISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDG 345
++MY CG + + + VFDR+ D++V+ W+++I YG+HG+ ++++ +F + G P
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388
Query: 346 VIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIE 405
V F+++L CSH GL+ +G+ ++ M +G++ + EHYA MVDLLGRA L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448
Query: 406 GMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWED 465
M + G V+G+LLG+CRIH N++LA+ +LF L+P+NAG YV+LA +Y +A W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508
Query: 466 AAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
+++KLL R ++K G +E+ R + F DE +P EQI L KL + M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563
BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 359.8 bits (922), Expect = 5.3e-98
Identity = 190/521 (36.47%), Postives = 299/521 (57.39%), Query Frame = 0
Query: 36 DSYDYTKLLQHCRTIRSV---QELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARK 95
+ Y + L++ + S+ Q LH + + + F+A LI Y G+ + A K
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--LDSACK 189
Query: 96 VFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKN 155
VF + E+DV WN +I G+ G +AL LF +M + T VL AC ++N
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 249
Query: 156 LDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKC--------------------------- 215
L+ G+ V ++ + ++++L + NAM+ Y KC
Sbjct: 250 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 309
Query: 216 ----RDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 275
D E AREV + M +DIV+WN++IS Y NGK +EA+++FH L Q +
Sbjct: 310 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQI 369
Query: 276 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
TLV+ L AC A ++G W+HSY+ K G+ + + S LI MY+ CG + +R+VF+ V
Sbjct: 370 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 429
Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
+ ++V VWSA+I MHG E+++MF ++E +KP+GV F N+ CSH GL+ +
Sbjct: 430 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 489
Query: 396 EIYGKMEA-YGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
++ +ME+ YG+ +E+HYA +VD+LGR+G+LE+AV+FIE MP+ V+GALLGAC+I
Sbjct: 490 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 549
Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
H N+ LA+ +L L+P N G +V+L+++Y G+WE+ ++LRK +R ++K GCS
Sbjct: 550 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 609
Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTL-EKLEKIMDEDFE 521
SIEID M H F D +HP +E+++ L E +EK+ +E
Sbjct: 610 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 345.5 bits (885), Expect = 1.0e-93
Identity = 175/517 (33.85%), Postives = 295/517 (57.06%), Query Frame = 0
Query: 36 DSYDYTKLLQHC---RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHG--------- 95
+SY + +L+ C + + Q++H ++ G D + ++ T LI Y ++G
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 96 --EPKMGI------------------ARKVFDRLLERDVFLWNVVIQGYANWGPFAEALN 155
P + A+K+FD + +DV WN +I GYA G + EAL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 156 LFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYA 215
LF +M + + T V+ AC +++ G+ VH + G +L + NA+I Y+
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 216 KCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATL 275
KC ++ETA +F+ + +D++SWN++I GYT EA++LF ML + +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372
Query: 276 VAILPACVTKSASQVGFWVHSYVIK--SGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
++ILPAC A +G W+H Y+ K G+ + L + LI MYA CG + A VF+ +
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432
Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
K++ W+A+I + MHG A+ S ++F+ + ++G++PD + F+ LLS CSH+G++ GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492
Query: 396 EIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
I+ M + Y + K EHY M+DLLG +G ++A E I M ++ ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552
Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
H N++L + E L ++PEN G YV+L+++Y AG+W + AK R LL D+ ++K GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612
Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
SIEID + H F D+ HP +I+ LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 344.4 bits (882), Expect = 2.3e-93
Identity = 172/465 (36.99%), Postives = 282/465 (60.65%), Query Frame = 0
Query: 48 RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNV 107
R I +E+H + G D ++T L+ YA+ G + AR++FD +LER+V WN
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG--SLETARQLFDGMLERNVVSWNS 309
Query: 108 VIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCG 167
+I Y EA+ +F +M G + L AC + +L++G+ +H ++ G
Sbjct: 310 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 369
Query: 168 LDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFH 227
LD ++ V N++IS Y KC++V+TA +F ++ R +VSWN+MI G+ NG+ +A+ F
Sbjct: 370 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF- 429
Query: 228 AMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYAN 287
+ + ++TV PD T V+++ A S + W+H V++S +D + + L+ MYA
Sbjct: 430 SQMRSRTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 489
Query: 288 CGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNL 347
CG + IAR +FD + +++V W+A+I YG HGF + +L +F +++ +KP+GV FL++
Sbjct: 490 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 549
Query: 348 LSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQA 407
+S CSH+GL+ G + + M E Y +E +HY +MVDLLGRAG L +A +FI MPV+
Sbjct: 550 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 609
Query: 408 GKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRK 467
+VYGA+LGAC+IH N+ A++ E+LF L+P++ G +V+LA++Y A WE ++R
Sbjct: 610 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 669
Query: 468 LLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKL 512
+ + +RK GCS +EI H F +HP +++I+ LEKL
Sbjct: 670 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match:
P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)
HSP 1 Score: 344.0 bits (881), Expect = 3.0e-93
Identity = 174/481 (36.17%), Postives = 287/481 (59.67%), Query Frame = 0
Query: 36 DSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFD 95
+S Y +++ ++ +Q++HA +IV G ++ L TKLI + +F
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL 67
Query: 96 RLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDK 155
+ D FL+N VI+ + + + M S + YTF V+K+C + L
Sbjct: 68 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127
Query: 156 GKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTS 215
GK VH H + G LD +V A+++FY+KC D+E AR+VFD M + IV+WNS++SG+
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187
Query: 216 NGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGA 275
NG DEAI +F+ M ++ PD+AT V++L AC A +G WVH Y+I G+D+
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247
Query: 276 PLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLE-E 335
LG+ LI++Y+ CG V AR+VFD++ + NV W+A+I YG HG+ ++++ +F +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307
Query: 336 VGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLE 395
G P+ V F+ +LS C+HAGL+ +GR +Y +M ++Y + EH+ MVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367
Query: 396 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILAS 455
+A +FI + ++ A+LGAC++H N L E+ ++L L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427
Query: 456 MYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEK 512
+Y +G+ ++ + +R + N+RK +G S IE++ ++F DESH T +I+ LE
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 484
BLAST of Sed0001671 vs. ExPASy TrEMBL
Match:
A0A6J1I919 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470278 PE=4 SV=1)
HSP 1 Score: 963.8 bits (2490), Expect = 3.0e-277
Identity = 463/524 (88.36%), Postives = 498/524 (95.04%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN +Y R+ S+ QP FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1 MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. ExPASy TrEMBL
Match:
A0A6J1FMZ9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447289 PE=4 SV=1)
HSP 1 Score: 958.0 bits (2475), Expect = 1.6e-275
Identity = 459/524 (87.60%), Postives = 497/524 (94.85%), Query Frame = 0
Query: 1 MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
MN +Y R+ S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSV+ELHA
Sbjct: 1 MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60
Query: 61 QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61 QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120
Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180
Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240
Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300
Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360
Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480
Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524
BLAST of Sed0001671 vs. ExPASy TrEMBL
Match:
A0A6J1CVV9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111014767 PE=4 SV=1)
HSP 1 Score: 931.4 bits (2406), Expect = 1.6e-267
Identity = 437/510 (85.69%), Postives = 481/510 (94.31%), Query Frame = 0
Query: 13 KNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLA 72
KNQP FRFLR +DRS EY RDSYDYT LLQHCRTIRSVQELHAQIIVEGLDQNGFLA
Sbjct: 15 KNQPFFRFLRFFLSDRSPGEYRRDSYDYTNLLQHCRTIRSVQELHAQIIVEGLDQNGFLA 74
Query: 73 TKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSG 132
TKLIG+YAEHG+ KMG+ARKVFDRL+ERDVF+WNVVI+GYANWGPF EALNLFDEMR++G
Sbjct: 75 TKLIGKYAEHGDSKMGVARKVFDRLVERDVFVWNVVIRGYANWGPFDEALNLFDEMRVNG 134
Query: 133 EPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAR 192
PTNRYTFPFVLKACGAMKN DKGK+VHGHVLK GLDLDLFVGNA+I+FYAKC D+ET R
Sbjct: 135 APTNRYTFPFVLKACGAMKNRDKGKVVHGHVLKSGLDLDLFVGNALIAFYAKCLDIETTR 194
Query: 193 EVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVT 252
+VFDEM ++DIVSWNSMI+G+TSNGKVDEAIMLFHAM+HNQ CSPDNATLV ILPACV+
Sbjct: 195 KVFDEMPLKDIVSWNSMIAGFTSNGKVDEAIMLFHAMVHNQGACSPDNATLVGILPACVS 254
Query: 253 KSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAI 312
KSA+QVGFWVHSYVIK+GM VGAPLGSCLISMYANCGHVNIARDVF+R+DDKNVIVWSA+
Sbjct: 255 KSAAQVGFWVHSYVIKTGMQVGAPLGSCLISMYANCGHVNIARDVFNRIDDKNVIVWSAV 314
Query: 313 IRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKMEAYGV 372
IRCYGMHG A+E+L MFTSLEEVGLKPDGVIFLNLLSTCSHAGL+AKGR+IY KME YGV
Sbjct: 315 IRCYGMHGLADEALTMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVAKGRQIYEKMETYGV 374
Query: 373 ERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIQLAKEVGE 432
ERKEEHYA MVDLLGRAGF++QAV+FIEGMP+QAGKDVYGALLGACRIHNNI++AKE E
Sbjct: 375 ERKEEHYACMVDLLGRAGFVDQAVKFIEGMPMQAGKDVYGALLGACRIHNNIEVAKEAAE 434
Query: 433 KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFG 492
KLFVLDPENAGRYVILASM+EDAGQWEDAAKLRKLLRDR I+KP+GCSSIEIDR+HHVFG
Sbjct: 435 KLFVLDPENAGRYVILASMHEDAGQWEDAAKLRKLLRDRKIKKPVGCSSIEIDRIHHVFG 494
Query: 493 KKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
K+DESHPF+EQIFDTLEKLE+IM+EDFE +
Sbjct: 495 KEDESHPFSEQIFDTLEKLERIMEEDFEPV 524
BLAST of Sed0001671 vs. ExPASy TrEMBL
Match:
A0A0A0L101 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1)
HSP 1 Score: 878.6 bits (2269), Expect = 1.3e-251
Identity = 422/526 (80.23%), Postives = 469/526 (89.16%), Query Frame = 0
Query: 4 MYWLCRR-----SSKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 63
M LCRR + +NQP F++ S +Y+RDSY + KLL HCR+IRSVQELHA
Sbjct: 1 MNGLCRRTWQALTFRNQP-------FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60
Query: 64 QIIVEGLDQNGFLATKLIGRYAEH--GEPKMGIARKVFDRLLERDVFLWNVVIQGYANWG 123
QI+VEGLDQNGF+A KLIG+Y EH GE KMG ARKVFD L+ RDVF+WNVVIQGYA+ G
Sbjct: 61 QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120
Query: 124 PFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGN 183
PF EALNLFDEMR+SGEPTNRYTFPFVLKACGAMKN DKG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180
Query: 184 AMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVC 243
A+I+FY+KC+DVETAR+VFD+MS+RDIVSWNSMI GYT NGK DEAIM FHAMLHNQ C
Sbjct: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240
Query: 244 SPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARD 303
+PD+ATLVAILPAC TKSASQVGFWVHSYVIK+G++VGAPLGSCLI MY NCGHVNIARD
Sbjct: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300
Query: 304 VFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 363
VFDR+DDKNVIVWSAIIRCYGMHGFA+E+ NMF LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360
Query: 364 IAKGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 423
+AKG EIY KMEAYG+ERK+ HYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420
Query: 424 ACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 483
ACRIHNN++LAKEVGEKLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480
Query: 484 IGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
GCSSIE+DR+HHVFGKKDE+HP TE+IFDTLEKLE+IM+EDFE I
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 519
BLAST of Sed0001671 vs. ExPASy TrEMBL
Match:
A0A5A7UCB1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00430 PE=4 SV=1)
HSP 1 Score: 870.5 bits (2248), Expect = 3.4e-249
Identity = 409/500 (81.80%), Postives = 462/500 (92.40%), Query Frame = 0
Query: 25 FTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAE--H 84
F++R S +Y+RDSYD+ KLL HCRTIRSVQELHAQI+VEGLDQNGFLATKLIG+Y E
Sbjct: 20 FSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELGE 79
Query: 85 GEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPF 144
GE KMG ARKVFDRLL+RDVFLWNVVIQGYA++GPF EALNLFDEMR+SGEPTNRYTFPF
Sbjct: 80 GESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPF 139
Query: 145 VLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRD 204
VLKACGA+KN DKG+IVHG+V+KCGLDLDLFVGNA+IS Y+KC+DVETAR+VFD+MS+RD
Sbjct: 140 VLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRD 199
Query: 205 IVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWV 264
VSWNSMI GYT N + D+AIM FHAMLHNQ C PD+ATLVAILPAC TKSASQVGFWV
Sbjct: 200 TVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADCLPDDATLVAILPACATKSASQVGFWV 259
Query: 265 HSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFA 324
HSY+IK+GM+VGA LGSCLISMY NCGH+NIARDVF+R+D+KNVIVWSAIIRCYGMHG A
Sbjct: 260 HSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLA 319
Query: 325 EESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKMEAYGVERKEEHYASM 384
+E+LNMF LEEVG+KPDG+IFLNLLS CSHAGL+AKGREIY KMEAYG+ER ++HYA M
Sbjct: 320 DEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKMEAYGLERNDKHYACM 379
Query: 385 VDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENA 444
VDLL RAGFLEQA EFIE MPVQAGKDVYGAL GACRIHNN++LAKEVGEKLF+LDPENA
Sbjct: 380 VDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENA 439
Query: 445 GRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTE 504
GRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP GCSSIE+DR+HHVFGKKDE+HPFTE
Sbjct: 440 GRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTE 499
Query: 505 QIFDTLEKLEKIMDEDFESI 523
+IFDT+EKLE++M+EDFE I
Sbjct: 500 EIFDTIEKLERLMEEDFEPI 519
BLAST of Sed0001671 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 365.5 bits (937), Expect = 6.9e-101
Identity = 175/477 (36.69%), Postives = 293/477 (61.43%), Query Frame = 0
Query: 46 HCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLW 105
H ++ +H I+ G DQ+ FLATKLIG Y++ G + ARKVFD+ +R +++W
Sbjct: 89 HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148
Query: 106 NVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGA----MKNLDKGKIVHG 165
N + + G E L L+ +M G ++R+T+ +VLKAC A + +L KGK +H
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208
Query: 166 HVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDE 225
H+ + G +++ ++ YA+ V+ A VF M +R++VSW++MI+ Y NGK E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268
Query: 226 AIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCL 285
A+ F M+ SP++ T+V++L AC + +A + G +H Y+++ G+D P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328
Query: 286 ISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDG 345
++MY CG + + + VFDR+ D++V+ W+++I YG+HG+ ++++ +F + G P
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388
Query: 346 VIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIE 405
V F+++L CSH GL+ +G+ ++ M +G++ + EHYA MVDLLGRA L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448
Query: 406 GMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWED 465
M + G V+G+LLG+CRIH N++LA+ +LF L+P+NAG YV+LA +Y +A W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508
Query: 466 AAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
+++KLL R ++K G +E+ R + F DE +P EQI L KL + M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563
BLAST of Sed0001671 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 359.8 bits (922), Expect = 3.8e-99
Identity = 190/521 (36.47%), Postives = 299/521 (57.39%), Query Frame = 0
Query: 36 DSYDYTKLLQHCRTIRSV---QELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARK 95
+ Y + L++ + S+ Q LH + + + F+A LI Y G+ + A K
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--LDSACK 189
Query: 96 VFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKN 155
VF + E+DV WN +I G+ G +AL LF +M + T VL AC ++N
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 249
Query: 156 LDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKC--------------------------- 215
L+ G+ V ++ + ++++L + NAM+ Y KC
Sbjct: 250 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 309
Query: 216 ----RDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 275
D E AREV + M +DIV+WN++IS Y NGK +EA+++FH L Q +
Sbjct: 310 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQI 369
Query: 276 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
TLV+ L AC A ++G W+HSY+ K G+ + + S LI MY+ CG + +R+VF+ V
Sbjct: 370 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 429
Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
+ ++V VWSA+I MHG E+++MF ++E +KP+GV F N+ CSH GL+ +
Sbjct: 430 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 489
Query: 396 EIYGKMEA-YGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
++ +ME+ YG+ +E+HYA +VD+LGR+G+LE+AV+FIE MP+ V+GALLGAC+I
Sbjct: 490 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 549
Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
H N+ LA+ +L L+P N G +V+L+++Y G+WE+ ++LRK +R ++K GCS
Sbjct: 550 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 609
Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTL-EKLEKIMDEDFE 521
SIEID M H F D +HP +E+++ L E +EK+ +E
Sbjct: 610 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
BLAST of Sed0001671 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 345.5 bits (885), Expect = 7.4e-95
Identity = 175/517 (33.85%), Postives = 295/517 (57.06%), Query Frame = 0
Query: 36 DSYDYTKLLQHC---RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHG--------- 95
+SY + +L+ C + + Q++H ++ G D + ++ T LI Y ++G
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 96 --EPKMGI------------------ARKVFDRLLERDVFLWNVVIQGYANWGPFAEALN 155
P + A+K+FD + +DV WN +I GYA G + EAL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 156 LFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYA 215
LF +M + + T V+ AC +++ G+ VH + G +L + NA+I Y+
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 216 KCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATL 275
KC ++ETA +F+ + +D++SWN++I GYT EA++LF ML + +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372
Query: 276 VAILPACVTKSASQVGFWVHSYVIK--SGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
++ILPAC A +G W+H Y+ K G+ + L + LI MYA CG + A VF+ +
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432
Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
K++ W+A+I + MHG A+ S ++F+ + ++G++PD + F+ LLS CSH+G++ GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492
Query: 396 EIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
I+ M + Y + K EHY M+DLLG +G ++A E I M ++ ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552
Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
H N++L + E L ++PEN G YV+L+++Y AG+W + AK R LL D+ ++K GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612
Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
SIEID + H F D+ HP +I+ LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of Sed0001671 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 344.4 bits (882), Expect = 1.7e-94
Identity = 172/465 (36.99%), Postives = 282/465 (60.65%), Query Frame = 0
Query: 48 RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNV 107
R I +E+H + G D ++T L+ YA+ G + AR++FD +LER+V WN
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG--SLETARQLFDGMLERNVVSWNS 309
Query: 108 VIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCG 167
+I Y EA+ +F +M G + L AC + +L++G+ +H ++ G
Sbjct: 310 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 369
Query: 168 LDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFH 227
LD ++ V N++IS Y KC++V+TA +F ++ R +VSWN+MI G+ NG+ +A+ F
Sbjct: 370 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF- 429
Query: 228 AMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYAN 287
+ + ++TV PD T V+++ A S + W+H V++S +D + + L+ MYA
Sbjct: 430 SQMRSRTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 489
Query: 288 CGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNL 347
CG + IAR +FD + +++V W+A+I YG HGF + +L +F +++ +KP+GV FL++
Sbjct: 490 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 549
Query: 348 LSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQA 407
+S CSH+GL+ G + + M E Y +E +HY +MVDLLGRAG L +A +FI MPV+
Sbjct: 550 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 609
Query: 408 GKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRK 467
+VYGA+LGAC+IH N+ A++ E+LF L+P++ G +V+LA++Y A WE ++R
Sbjct: 610 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 669
Query: 468 LLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKL 512
+ + +RK GCS +EI H F +HP +++I+ LEKL
Sbjct: 670 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
BLAST of Sed0001671 vs. TAIR 10
Match:
AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 344.0 bits (881), Expect = 2.2e-94
Identity = 174/481 (36.17%), Postives = 287/481 (59.67%), Query Frame = 0
Query: 36 DSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFD 95
+S Y +++ ++ +Q++HA +IV G ++ L TKLI + +F
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL 67
Query: 96 RLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDK 155
+ D FL+N VI+ + + + M S + YTF V+K+C + L
Sbjct: 68 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127
Query: 156 GKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTS 215
GK VH H + G LD +V A+++FY+KC D+E AR+VFD M + IV+WNS++SG+
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187
Query: 216 NGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGA 275
NG DEAI +F+ M ++ PD+AT V++L AC A +G WVH Y+I G+D+
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247
Query: 276 PLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLE-E 335
LG+ LI++Y+ CG V AR+VFD++ + NV W+A+I YG HG+ ++++ +F +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307
Query: 336 VGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLE 395
G P+ V F+ +LS C+HAGL+ +GR +Y +M ++Y + EH+ MVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367
Query: 396 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILAS 455
+A +FI + ++ A+LGAC++H N L E+ ++L L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427
Query: 456 MYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEK 512
+Y +G+ ++ + +R + N+RK +G S IE++ ++F DESH T +I+ LE
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 484
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023540099.1 | 9.5e-278 | 87.98 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... | [more] |
XP_022971604.1 | 6.2e-277 | 88.36 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... | [more] |
KAG6596261.1 | 1.5e-275 | 87.79 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022942131.1 | 3.4e-275 | 87.60 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... | [more] |
XP_038905146.1 | 6.8e-268 | 85.41 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benin... | [more] |
Match Name | E-value | Identity | Description | |
Q9STF3 | 9.7e-100 | 36.69 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
O82380 | 5.3e-98 | 36.47 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 1.0e-93 | 33.85 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q3E6Q1 | 2.3e-93 | 36.99 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
P93011 | 3.0e-93 | 36.17 | Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I919 | 3.0e-277 | 88.36 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... | [more] |
A0A6J1FMZ9 | 1.6e-275 | 87.60 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... | [more] |
A0A6J1CVV9 | 1.6e-267 | 85.69 | pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Mom... | [more] |
A0A0A0L101 | 1.3e-251 | 80.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1 | [more] |
A0A5A7UCB1 | 3.4e-249 | 81.80 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT3G46790.1 | 6.9e-101 | 36.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 3.8e-99 | 36.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 7.4e-95 | 33.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G11290.1 | 1.7e-94 | 36.99 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G33760.1 | 2.2e-94 | 36.17 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |