Sed0001671 (gene) Chayote v1

Overview
NameSed0001671
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG04: 11421573 .. 11423249 (-)
RNA-Seq ExpressionSed0001671
SyntenySed0001671
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACTTTTTGGAGCAACCTAAAATTTCTCAGGAGGGATCGAGGGGCCCCTAGAACCGATCGGCGTTTGTCCGCCGCCGCATTATCAGTAACCTTTTTTTTAGCTTTGATGAATCCAATGTATTGGCTCTGCCGGCGATCTTCCAAAAACCAACCCCTCTTCAGATTTCTAAGATCCATCTTCACCGATCGGAGTTCTAGGGAGTATAATCGCGATTCATACGATTACACAAAGTTATTACAACATTGCAGAACAATCAGAAGCGTTCAAGAACTACATGCCCAGATAATCGTTGAAGGGCTGGACCAAAATGGGTTCTTAGCCACGAAGCTAATCGGCAGATACGCCGAGCACGGCGAGCCCAAAATGGGGATTGCGCGGAAGGTGTTCGATAGATTGCTTGAAAGAGATGTGTTCTTGTGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCCCTCAACCTGTTCGATGAAATGCGACTCAGTGGTGAGCCCACCAATCGCTACACATTTCCCTTTGTGTTGAAGGCATGTGGCGCAATGAAGAACCTTGACAAGGGGAAGATTGTTCATGGGCATGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTATGATTTCGTTCTATGCTAAGTGTCGGGACGTTGAAACGGCTCGGGAAGTGTTCGACGAAATGTCTATGAGAGACATTGTGAGTTGGAACTCCATGATTTCTGGGTATACTTCCAATGGAAAAGTGGATGAAGCTATTATGCTTTTCCATGCCATGCTGCATAATCAAACTGTTTGCTCACCTGATAATGCAACTCTTGTTGCGATTCTGCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTATGTTATAAAGTCAGGAATGGACGTTGGGGCTCCATTAGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCACGTAAACATTGCCAGAGATGTTTTCGACCGAGTCGACGACAAGAACGTCATCGTATGGAGTGCAATCATAAGGTGTTATGGGATGCATGGTTTTGCAGAAGAGTCATTAAACATGTTCACAAGCTTGGAAGAAGTTGGTCTAAAACCGGACGGCGTGATCTTCCTGAATTTGTTGTCGACGTGTAGTCATGCAGGGCTTATAGCAAAAGGCCGCGAGATATACGGAAAAATGGAGGCTTATGGAGTGGAGAGGAAAGAGGAACATTATGCAAGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCCTAGAACAGGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATACAATTAGCTAAAGAAGTTGGGGAGAAGTTGTTCGTCTTGGATCCCGAAAATGCGGGACGATACGTGATCTTAGCGAGTATGTATGAGGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGGAAGCCAATTGGTTGCAGTTCAATAGAGATAGATAGGATGCATCATGTGTTTGGGAAGAAGGATGAATCTCATCCCTTCACTGAACAAATTTTTGACACATTAGAAAAGCTAGAAAAGATAATGGATGAAGATTTTGAATCTATTTAA

mRNA sequence

ATAACTTTTTGGAGCAACCTAAAATTTCTCAGGAGGGATCGAGGGGCCCCTAGAACCGATCGGCGTTTGTCCGCCGCCGCATTATCAGTAACCTTTTTTTTAGCTTTGATGAATCCAATGTATTGGCTCTGCCGGCGATCTTCCAAAAACCAACCCCTCTTCAGATTTCTAAGATCCATCTTCACCGATCGGAGTTCTAGGGAGTATAATCGCGATTCATACGATTACACAAAGTTATTACAACATTGCAGAACAATCAGAAGCGTTCAAGAACTACATGCCCAGATAATCGTTGAAGGGCTGGACCAAAATGGGTTCTTAGCCACGAAGCTAATCGGCAGATACGCCGAGCACGGCGAGCCCAAAATGGGGATTGCGCGGAAGGTGTTCGATAGATTGCTTGAAAGAGATGTGTTCTTGTGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCCCTCAACCTGTTCGATGAAATGCGACTCAGTGGTGAGCCCACCAATCGCTACACATTTCCCTTTGTGTTGAAGGCATGTGGCGCAATGAAGAACCTTGACAAGGGGAAGATTGTTCATGGGCATGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTATGATTTCGTTCTATGCTAAGTGTCGGGACGTTGAAACGGCTCGGGAAGTGTTCGACGAAATGTCTATGAGAGACATTGTGAGTTGGAACTCCATGATTTCTGGGTATACTTCCAATGGAAAAGTGGATGAAGCTATTATGCTTTTCCATGCCATGCTGCATAATCAAACTGTTTGCTCACCTGATAATGCAACTCTTGTTGCGATTCTGCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTATGTTATAAAGTCAGGAATGGACGTTGGGGCTCCATTAGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCACGTAAACATTGCCAGAGATGTTTTCGACCGAGTCGACGACAAGAACGTCATCGTATGGAGTGCAATCATAAGGTGTTATGGGATGCATGGTTTTGCAGAAGAGTCATTAAACATGTTCACAAGCTTGGAAGAAGTTGGTCTAAAACCGGACGGCGTGATCTTCCTGAATTTGTTGTCGACGTGTAGTCATGCAGGGCTTATAGCAAAAGGCCGCGAGATATACGGAAAAATGGAGGCTTATGGAGTGGAGAGGAAAGAGGAACATTATGCAAGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCCTAGAACAGGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATACAATTAGCTAAAGAAGTTGGGGAGAAGTTGTTCGTCTTGGATCCCGAAAATGCGGGACGATACGTGATCTTAGCGAGTATGTATGAGGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGGAAGCCAATTGGTTGCAGTTCAATAGAGATAGATAGGATGCATCATGTGTTTGGGAAGAAGGATGAATCTCATCCCTTCACTGAACAAATTTTTGACACATTAGAAAAGCTAGAAAAGATAATGGATGAAGATTTTGAATCTATTTAA

Coding sequence (CDS)

ATGAATCCAATGTATTGGCTCTGCCGGCGATCTTCCAAAAACCAACCCCTCTTCAGATTTCTAAGATCCATCTTCACCGATCGGAGTTCTAGGGAGTATAATCGCGATTCATACGATTACACAAAGTTATTACAACATTGCAGAACAATCAGAAGCGTTCAAGAACTACATGCCCAGATAATCGTTGAAGGGCTGGACCAAAATGGGTTCTTAGCCACGAAGCTAATCGGCAGATACGCCGAGCACGGCGAGCCCAAAATGGGGATTGCGCGGAAGGTGTTCGATAGATTGCTTGAAAGAGATGTGTTCTTGTGGAACGTGGTTATTCAAGGGTATGCGAATTGGGGTCCGTTTGCTGAAGCCCTCAACCTGTTCGATGAAATGCGACTCAGTGGTGAGCCCACCAATCGCTACACATTTCCCTTTGTGTTGAAGGCATGTGGCGCAATGAAGAACCTTGACAAGGGGAAGATTGTTCATGGGCATGTTTTGAAATGTGGGTTGGACTTGGATTTGTTCGTGGGCAATGCTATGATTTCGTTCTATGCTAAGTGTCGGGACGTTGAAACGGCTCGGGAAGTGTTCGACGAAATGTCTATGAGAGACATTGTGAGTTGGAACTCCATGATTTCTGGGTATACTTCCAATGGAAAAGTGGATGAAGCTATTATGCTTTTCCATGCCATGCTGCATAATCAAACTGTTTGCTCACCTGATAATGCAACTCTTGTTGCGATTCTGCCTGCTTGTGTTACAAAATCAGCTTCCCAAGTTGGCTTCTGGGTTCATTCCTATGTTATAAAGTCAGGAATGGACGTTGGGGCTCCATTAGGCAGTTGCCTTATCTCAATGTATGCTAACTGTGGTCACGTAAACATTGCCAGAGATGTTTTCGACCGAGTCGACGACAAGAACGTCATCGTATGGAGTGCAATCATAAGGTGTTATGGGATGCATGGTTTTGCAGAAGAGTCATTAAACATGTTCACAAGCTTGGAAGAAGTTGGTCTAAAACCGGACGGCGTGATCTTCCTGAATTTGTTGTCGACGTGTAGTCATGCAGGGCTTATAGCAAAAGGCCGCGAGATATACGGAAAAATGGAGGCTTATGGAGTGGAGAGGAAAGAGGAACATTATGCAAGCATGGTGGATCTCTTAGGGAGGGCTGGTTTCCTAGAACAGGCAGTAGAGTTCATTGAAGGCATGCCAGTGCAGGCAGGGAAAGATGTGTATGGTGCATTGCTTGGTGCTTGTAGGATACACAACAACATACAATTAGCTAAAGAAGTTGGGGAGAAGTTGTTCGTCTTGGATCCCGAAAATGCGGGACGATACGTGATCTTAGCGAGTATGTATGAGGATGCAGGGCAGTGGGAAGATGCTGCTAAACTAAGGAAGTTGCTGAGAGATAGGAATATTAGGAAGCCAATTGGTTGCAGTTCAATAGAGATAGATAGGATGCATCATGTGTTTGGGAAGAAGGATGAATCTCATCCCTTCACTGAACAAATTTTTGACACATTAGAAAAGCTAGAAAAGATAATGGATGAAGATTTTGAATCTATTTAA

Protein sequence

MNPMYWLCRRSSKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI
Homology
BLAST of Sed0001671 vs. NCBI nr
Match: XP_023540099.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 966.5 bits (2497), Expect = 9.5e-278
Identity = 461/524 (87.98%), Postives = 499/524 (95.23%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN ++W   R+  S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1   MNGLHWRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVFLWNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFLWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIM+FHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMIFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSY+IK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYIIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY +MEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYERMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. NCBI nr
Match: XP_022971604.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 963.8 bits (2490), Expect = 6.2e-277
Identity = 463/524 (88.36%), Postives = 498/524 (95.04%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN +Y    R+  S+ QP FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. NCBI nr
Match: KAG6596261.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 959.1 bits (2478), Expect = 1.5e-275
Identity = 460/524 (87.79%), Postives = 497/524 (94.85%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN +Y    R+  S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. NCBI nr
Match: XP_022942131.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata] >KAG7027809.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 958.0 bits (2475), Expect = 3.4e-275
Identity = 459/524 (87.60%), Postives = 497/524 (94.85%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN +Y    R+  S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSV+ELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. NCBI nr
Match: XP_038905146.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 933.7 bits (2412), Expect = 6.8e-268
Identity = 445/521 (85.41%), Postives = 486/521 (93.28%), Query Frame = 0

Query: 7   LCRR-----SSKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQII 66
           LCRR     +S+NQP FR LRS F+DRSS +Y+RDSYDYTKLL HCRTIRSVQ LHAQII
Sbjct: 4   LCRRTPQALASRNQPCFRLLRSFFSDRSSGKYHRDSYDYTKLLDHCRTIRSVQGLHAQII 63

Query: 67  VEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEA 126
           VEG DQNGFLATKLIG+Y EHGE KMGIARKVFD+LL+RDVF+WNVVIQGYAN GPF EA
Sbjct: 64  VEGQDQNGFLATKLIGKYVEHGESKMGIARKVFDKLLQRDVFVWNVVIQGYANLGPFVEA 123

Query: 127 LNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISF 186
           LNLFDEMR+SG PTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFV NA+I+F
Sbjct: 124 LNLFDEMRVSGAPTNRYTFPFVLKACGAMKNSDKGKIVHGHVLKCGLDLDLFVSNALIAF 183

Query: 187 YAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 246
           YAKC+DVETAR+VFDEMS+RDIVSWNSMI+GYT N KV++AIMLFHAMLHNQ+ CSPD+A
Sbjct: 184 YAKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNEKVEDAIMLFHAMLHNQSACSPDSA 243

Query: 247 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 306
           TL+ ILPACVTKSASQVGFWVHSYVIK+GM+VGA LGSCLIS+YANCGHVNIARDVF+R+
Sbjct: 244 TLLGILPACVTKSASQVGFWVHSYVIKTGMEVGAQLGSCLISVYANCGHVNIARDVFNRI 303

Query: 307 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 366
           DDKNVIVWSAIIRCYGMHGFA+E+LNMFT LEE GLKPDGV+FLNLLSTCSHAGLIAKG 
Sbjct: 304 DDKNVIVWSAIIRCYGMHGFADEALNMFTRLEEAGLKPDGVLFLNLLSTCSHAGLIAKGH 363

Query: 367 EIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH 426
           EIY KME YGVERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH
Sbjct: 364 EIYEKMEGYGVERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIH 423

Query: 427 NNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSS 486
            NI+LAKE+GEKLF+LD +NAGRY+ILASMYEDAGQWEDAAKLRKLLRDRN+RKP+GCSS
Sbjct: 424 KNIELAKEIGEKLFILDSQNAGRYMILASMYEDAGQWEDAAKLRKLLRDRNVRKPVGCSS 483

Query: 487 IEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           IE+DR+HHVFGK+DE+HPFTEQIFDTLEKLE IM+ DFE I
Sbjct: 484 IEVDRIHHVFGKEDETHPFTEQIFDTLEKLESIMEADFEPI 524

BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 9.7e-100
Identity = 175/477 (36.69%), Postives = 293/477 (61.43%), Query Frame = 0

Query: 46  HCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLW 105
           H  ++     +H  I+  G DQ+ FLATKLIG Y++ G   +  ARKVFD+  +R +++W
Sbjct: 89  HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148

Query: 106 NVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGA----MKNLDKGKIVHG 165
           N + +     G   E L L+ +M   G  ++R+T+ +VLKAC A    + +L KGK +H 
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208

Query: 166 HVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDE 225
           H+ + G    +++   ++  YA+   V+ A  VF  M +R++VSW++MI+ Y  NGK  E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268

Query: 226 AIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCL 285
           A+  F  M+      SP++ T+V++L AC + +A + G  +H Y+++ G+D   P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328

Query: 286 ISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDG 345
           ++MY  CG + + + VFDR+ D++V+ W+++I  YG+HG+ ++++ +F  +   G  P  
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388

Query: 346 VIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIE 405
           V F+++L  CSH GL+ +G+ ++  M   +G++ + EHYA MVDLLGRA  L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448

Query: 406 GMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWED 465
            M  + G  V+G+LLG+CRIH N++LA+    +LF L+P+NAG YV+LA +Y +A  W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508

Query: 466 AAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
             +++KLL  R ++K  G   +E+ R  + F   DE +P  EQI   L KL + M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 5.3e-98
Identity = 190/521 (36.47%), Postives = 299/521 (57.39%), Query Frame = 0

Query: 36  DSYDYTKLLQHCRTIRSV---QELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARK 95
           + Y +  L++    + S+   Q LH   +   +  + F+A  LI  Y   G+  +  A K
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--LDSACK 189

Query: 96  VFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKN 155
           VF  + E+DV  WN +I G+   G   +AL LF +M       +  T   VL AC  ++N
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 249

Query: 156 LDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKC--------------------------- 215
           L+ G+ V  ++ +  ++++L + NAM+  Y KC                           
Sbjct: 250 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 309

Query: 216 ----RDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 275
                D E AREV + M  +DIV+WN++IS Y  NGK +EA+++FH  L  Q     +  
Sbjct: 310 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQI 369

Query: 276 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
           TLV+ L AC    A ++G W+HSY+ K G+ +   + S LI MY+ CG +  +R+VF+ V
Sbjct: 370 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 429

Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
           + ++V VWSA+I    MHG   E+++MF  ++E  +KP+GV F N+   CSH GL+ +  
Sbjct: 430 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 489

Query: 396 EIYGKMEA-YGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
            ++ +ME+ YG+  +E+HYA +VD+LGR+G+LE+AV+FIE MP+     V+GALLGAC+I
Sbjct: 490 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 549

Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
           H N+ LA+    +L  L+P N G +V+L+++Y   G+WE+ ++LRK +R   ++K  GCS
Sbjct: 550 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 609

Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTL-EKLEKIMDEDFE 521
           SIEID M H F   D +HP +E+++  L E +EK+    +E
Sbjct: 610 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647

BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.0e-93
Identity = 175/517 (33.85%), Postives = 295/517 (57.06%), Query Frame = 0

Query: 36  DSYDYTKLLQHC---RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHG--------- 95
           +SY +  +L+ C   +  +  Q++H  ++  G D + ++ T LI  Y ++G         
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 96  --EPKMGI------------------ARKVFDRLLERDVFLWNVVIQGYANWGPFAEALN 155
              P   +                  A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 156 LFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYA 215
           LF +M  +    +  T   V+ AC    +++ G+ VH  +   G   +L + NA+I  Y+
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 216 KCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATL 275
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++LF  ML +    +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372

Query: 276 VAILPACVTKSASQVGFWVHSYVIK--SGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
           ++ILPAC    A  +G W+H Y+ K   G+   + L + LI MYA CG +  A  VF+ +
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
             K++  W+A+I  + MHG A+ S ++F+ + ++G++PD + F+ LLS CSH+G++  GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 396 EIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
            I+  M + Y +  K EHY  M+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
           H N++L +   E L  ++PEN G YV+L+++Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
           SIEID + H F   D+ HP   +I+  LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.3e-93
Identity = 172/465 (36.99%), Postives = 282/465 (60.65%), Query Frame = 0

Query: 48  RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNV 107
           R I   +E+H   +  G D    ++T L+  YA+ G   +  AR++FD +LER+V  WN 
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG--SLETARQLFDGMLERNVVSWNS 309

Query: 108 VIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCG 167
           +I  Y       EA+ +F +M   G      +    L AC  + +L++G+ +H   ++ G
Sbjct: 310 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 369

Query: 168 LDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFH 227
           LD ++ V N++IS Y KC++V+TA  +F ++  R +VSWN+MI G+  NG+  +A+  F 
Sbjct: 370 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF- 429

Query: 228 AMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYAN 287
           + + ++TV  PD  T V+++ A    S +    W+H  V++S +D    + + L+ MYA 
Sbjct: 430 SQMRSRTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 489

Query: 288 CGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNL 347
           CG + IAR +FD + +++V  W+A+I  YG HGF + +L +F  +++  +KP+GV FL++
Sbjct: 490 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 549

Query: 348 LSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQA 407
           +S CSH+GL+  G + +  M E Y +E   +HY +MVDLLGRAG L +A +FI  MPV+ 
Sbjct: 550 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 609

Query: 408 GKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRK 467
             +VYGA+LGAC+IH N+  A++  E+LF L+P++ G +V+LA++Y  A  WE   ++R 
Sbjct: 610 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 669

Query: 468 LLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKL 512
            +  + +RK  GCS +EI    H F     +HP +++I+  LEKL
Sbjct: 670 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710

BLAST of Sed0001671 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.0e-93
Identity = 174/481 (36.17%), Postives = 287/481 (59.67%), Query Frame = 0

Query: 36  DSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFD 95
           +S  Y  +++    ++ +Q++HA +IV G  ++  L TKLI          +     +F 
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL 67

Query: 96  RLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDK 155
            +   D FL+N VI+  +        +  +  M  S    + YTF  V+K+C  +  L  
Sbjct: 68  SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127

Query: 156 GKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTS 215
           GK VH H +  G  LD +V  A+++FY+KC D+E AR+VFD M  + IV+WNS++SG+  
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187

Query: 216 NGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGA 275
           NG  DEAI +F+ M   ++   PD+AT V++L AC    A  +G WVH Y+I  G+D+  
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247

Query: 276 PLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLE-E 335
            LG+ LI++Y+ CG V  AR+VFD++ + NV  W+A+I  YG HG+ ++++ +F  +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307

Query: 336 VGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLE 395
            G  P+ V F+ +LS C+HAGL+ +GR +Y +M ++Y +    EH+  MVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367

Query: 396 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILAS 455
           +A +FI  +          ++ A+LGAC++H N  L  E+ ++L  L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427

Query: 456 MYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEK 512
           +Y  +G+ ++ + +R  +   N+RK +G S IE++   ++F   DESH  T +I+  LE 
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 484

BLAST of Sed0001671 vs. ExPASy TrEMBL
Match: A0A6J1I919 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470278 PE=4 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 3.0e-277
Identity = 463/524 (88.36%), Postives = 498/524 (95.04%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN +Y    R+  S+ QP FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSVQELHA
Sbjct: 1   MNGLYRRYSRALVSRKQPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVQELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KMGIARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMGIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN +KGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNSEKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVNIARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNIARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAKEVG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKEVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. ExPASy TrEMBL
Match: A0A6J1FMZ9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111447289 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.6e-275
Identity = 459/524 (87.60%), Postives = 497/524 (94.85%), Query Frame = 0

Query: 1   MNPMYWLCRRS--SKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 60
           MN +Y    R+  S+N+P FRFLRSIF D S REY+RDSYDYTKLLQHCR+IRSV+ELHA
Sbjct: 1   MNGLYRRSSRALVSRNRPFFRFLRSIFNDWSRREYHRDSYDYTKLLQHCRSIRSVEELHA 60

Query: 61  QIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPF 120
           QI+VEG DQNGFLATKLIG+YAE+GE KM IARKVFDRLLE+DVF+WNVVIQGYANWGPF
Sbjct: 61  QIVVEGHDQNGFLATKLIGKYAEYGEEKMEIARKVFDRLLEKDVFVWNVVIQGYANWGPF 120

Query: 121 AEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAM 180
           AEALNL+DEMR+ GEPTNRYTFPFVLKACGAMKN DKGKIVHGHVLKCGLDLDLFVGNA+
Sbjct: 121 AEALNLYDEMRVGGEPTNRYTFPFVLKACGAMKNGDKGKIVHGHVLKCGLDLDLFVGNAL 180

Query: 181 ISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSP 240
           I+FY+KC+DVETAR+VFDEMS+RDIVSWNSMI+GYT NGKVDEAIMLFHAMLHNQT CSP
Sbjct: 181 IAFYSKCQDVETARKVFDEMSLRDIVSWNSMIAGYTLNGKVDEAIMLFHAMLHNQTACSP 240

Query: 241 DNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVF 300
           DNATLV ILPACVTKSASQVGFWVHSYVIK+GM+VGAPLGSCLISMYANCGHVN+ARDVF
Sbjct: 241 DNATLVGILPACVTKSASQVGFWVHSYVIKTGMEVGAPLGSCLISMYANCGHVNVARDVF 300

Query: 301 DRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIA 360
           DR+ DKNVIVWSAIIR YGMHGFA+E+LNMFTSLEE GLKPDGVIFLNLLSTCSHAGL+ 
Sbjct: 301 DRIKDKNVIVWSAIIRSYGMHGFADEALNMFTSLEEAGLKPDGVIFLNLLSTCSHAGLVE 360

Query: 361 KGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420
           KGREIY KMEAYG ERKEEHYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC
Sbjct: 361 KGREIYEKMEAYGAERKEEHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGAC 420

Query: 421 RIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIG 480
           RIHNNI+LAK+VG+KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP+G
Sbjct: 421 RIHNNIELAKKVGDKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPVG 480

Query: 481 CSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           CSSIEIDR++HVFGK+DESHPFTEQIFDTLEKLE++MDE+FE I
Sbjct: 481 CSSIEIDRINHVFGKEDESHPFTEQIFDTLEKLERVMDENFEPI 524

BLAST of Sed0001671 vs. ExPASy TrEMBL
Match: A0A6J1CVV9 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111014767 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.6e-267
Identity = 437/510 (85.69%), Postives = 481/510 (94.31%), Query Frame = 0

Query: 13  KNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLA 72
           KNQP FRFLR   +DRS  EY RDSYDYT LLQHCRTIRSVQELHAQIIVEGLDQNGFLA
Sbjct: 15  KNQPFFRFLRFFLSDRSPGEYRRDSYDYTNLLQHCRTIRSVQELHAQIIVEGLDQNGFLA 74

Query: 73  TKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSG 132
           TKLIG+YAEHG+ KMG+ARKVFDRL+ERDVF+WNVVI+GYANWGPF EALNLFDEMR++G
Sbjct: 75  TKLIGKYAEHGDSKMGVARKVFDRLVERDVFVWNVVIRGYANWGPFDEALNLFDEMRVNG 134

Query: 133 EPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAR 192
            PTNRYTFPFVLKACGAMKN DKGK+VHGHVLK GLDLDLFVGNA+I+FYAKC D+ET R
Sbjct: 135 APTNRYTFPFVLKACGAMKNRDKGKVVHGHVLKSGLDLDLFVGNALIAFYAKCLDIETTR 194

Query: 193 EVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVT 252
           +VFDEM ++DIVSWNSMI+G+TSNGKVDEAIMLFHAM+HNQ  CSPDNATLV ILPACV+
Sbjct: 195 KVFDEMPLKDIVSWNSMIAGFTSNGKVDEAIMLFHAMVHNQGACSPDNATLVGILPACVS 254

Query: 253 KSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAI 312
           KSA+QVGFWVHSYVIK+GM VGAPLGSCLISMYANCGHVNIARDVF+R+DDKNVIVWSA+
Sbjct: 255 KSAAQVGFWVHSYVIKTGMQVGAPLGSCLISMYANCGHVNIARDVFNRIDDKNVIVWSAV 314

Query: 313 IRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKMEAYGV 372
           IRCYGMHG A+E+L MFTSLEEVGLKPDGVIFLNLLSTCSHAGL+AKGR+IY KME YGV
Sbjct: 315 IRCYGMHGLADEALTMFTSLEEVGLKPDGVIFLNLLSTCSHAGLVAKGRQIYEKMETYGV 374

Query: 373 ERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIQLAKEVGE 432
           ERKEEHYA MVDLLGRAGF++QAV+FIEGMP+QAGKDVYGALLGACRIHNNI++AKE  E
Sbjct: 375 ERKEEHYACMVDLLGRAGFVDQAVKFIEGMPMQAGKDVYGALLGACRIHNNIEVAKEAAE 434

Query: 433 KLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFG 492
           KLFVLDPENAGRYVILASM+EDAGQWEDAAKLRKLLRDR I+KP+GCSSIEIDR+HHVFG
Sbjct: 435 KLFVLDPENAGRYVILASMHEDAGQWEDAAKLRKLLRDRKIKKPVGCSSIEIDRIHHVFG 494

Query: 493 KKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
           K+DESHPF+EQIFDTLEKLE+IM+EDFE +
Sbjct: 495 KEDESHPFSEQIFDTLEKLERIMEEDFEPV 524

BLAST of Sed0001671 vs. ExPASy TrEMBL
Match: A0A0A0L101 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.3e-251
Identity = 422/526 (80.23%), Postives = 469/526 (89.16%), Query Frame = 0

Query: 4   MYWLCRR-----SSKNQPLFRFLRSIFTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHA 63
           M  LCRR     + +NQP        F++ S  +Y+RDSY + KLL HCR+IRSVQELHA
Sbjct: 1   MNGLCRRTWQALTFRNQP-------FFSEWSFGKYHRDSYGFIKLLGHCRSIRSVQELHA 60

Query: 64  QIIVEGLDQNGFLATKLIGRYAEH--GEPKMGIARKVFDRLLERDVFLWNVVIQGYANWG 123
           QI+VEGLDQNGF+A KLIG+Y EH  GE KMG ARKVFD L+ RDVF+WNVVIQGYA+ G
Sbjct: 61  QILVEGLDQNGFVAAKLIGKYVEHDEGEVKMGTARKVFDTLVRRDVFVWNVVIQGYASLG 120

Query: 124 PFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGN 183
           PF EALNLFDEMR+SGEPTNRYTFPFVLKACGAMKN DKG+IVHGHV+KCGLDLDLFVGN
Sbjct: 121 PFVEALNLFDEMRVSGEPTNRYTFPFVLKACGAMKNSDKGEIVHGHVVKCGLDLDLFVGN 180

Query: 184 AMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVC 243
           A+I+FY+KC+DVETAR+VFD+MS+RDIVSWNSMI GYT NGK DEAIM FHAMLHNQ  C
Sbjct: 181 ALIAFYSKCQDVETARKVFDDMSLRDIVSWNSMIVGYTLNGKEDEAIMFFHAMLHNQADC 240

Query: 244 SPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARD 303
           +PD+ATLVAILPAC TKSASQVGFWVHSYVIK+G++VGAPLGSCLI MY NCGHVNIARD
Sbjct: 241 TPDSATLVAILPACATKSASQVGFWVHSYVIKTGIEVGAPLGSCLICMYGNCGHVNIARD 300

Query: 304 VFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGL 363
           VFDR+DDKNVIVWSAIIRCYGMHGFA+E+ NMF  LEE G+KPDG+IFLNLLS CSHAGL
Sbjct: 301 VFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSHAGL 360

Query: 364 IAKGREIYGKMEAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 423
           +AKG EIY KMEAYG+ERK+ HYA MVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG
Sbjct: 361 VAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLG 420

Query: 424 ACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKP 483
           ACRIHNN++LAKEVGEKLF+LDPE A RYV LA+MYEDAGQWEDAAKLRKLLRDRNIRKP
Sbjct: 421 ACRIHNNLELAKEVGEKLFILDPEKASRYVTLATMYEDAGQWEDAAKLRKLLRDRNIRKP 480

Query: 484 IGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDEDFESI 523
            GCSSIE+DR+HHVFGKKDE+HP TE+IFDTLEKLE+IM+EDFE I
Sbjct: 481 AGCSSIEVDRIHHVFGKKDETHPLTEEIFDTLEKLERIMEEDFEPI 519

BLAST of Sed0001671 vs. ExPASy TrEMBL
Match: A0A5A7UCB1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00430 PE=4 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 3.4e-249
Identity = 409/500 (81.80%), Postives = 462/500 (92.40%), Query Frame = 0

Query: 25  FTDRSSREYNRDSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAE--H 84
           F++R S +Y+RDSYD+ KLL HCRTIRSVQELHAQI+VEGLDQNGFLATKLIG+Y E   
Sbjct: 20  FSERRSGKYHRDSYDFMKLLGHCRTIRSVQELHAQILVEGLDQNGFLATKLIGKYVELGE 79

Query: 85  GEPKMGIARKVFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPF 144
           GE KMG ARKVFDRLL+RDVFLWNVVIQGYA++GPF EALNLFDEMR+SGEPTNRYTFPF
Sbjct: 80  GESKMGTARKVFDRLLQRDVFLWNVVIQGYASFGPFVEALNLFDEMRVSGEPTNRYTFPF 139

Query: 145 VLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRD 204
           VLKACGA+KN DKG+IVHG+V+KCGLDLDLFVGNA+IS Y+KC+DVETAR+VFD+MS+RD
Sbjct: 140 VLKACGALKNSDKGEIVHGYVVKCGLDLDLFVGNALISCYSKCQDVETARKVFDDMSLRD 199

Query: 205 IVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWV 264
            VSWNSMI GYT N + D+AIM FHAMLHNQ  C PD+ATLVAILPAC TKSASQVGFWV
Sbjct: 200 TVSWNSMIVGYTLNEREDDAIMFFHAMLHNQADCLPDDATLVAILPACATKSASQVGFWV 259

Query: 265 HSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFA 324
           HSY+IK+GM+VGA LGSCLISMY NCGH+NIARDVF+R+D+KNVIVWSAIIRCYGMHG A
Sbjct: 260 HSYIIKTGMEVGASLGSCLISMYGNCGHINIARDVFNRIDNKNVIVWSAIIRCYGMHGLA 319

Query: 325 EESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKMEAYGVERKEEHYASM 384
           +E+LNMF  LEEVG+KPDG+IFLNLLS CSHAGL+AKGREIY KMEAYG+ER ++HYA M
Sbjct: 320 DEALNMFRRLEEVGVKPDGLIFLNLLSACSHAGLVAKGREIYKKMEAYGLERNDKHYACM 379

Query: 385 VDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENA 444
           VDLL RAGFLEQA EFIE MPVQAGKDVYGAL GACRIHNN++LAKEVGEKLF+LDPENA
Sbjct: 380 VDLLARAGFLEQAAEFIEAMPVQAGKDVYGALFGACRIHNNLELAKEVGEKLFILDPENA 439

Query: 445 GRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTE 504
           GRY+ILASMYEDAGQWEDAAK+RKLLRDRNI+KP GCSSIE+DR+HHVFGKKDE+HPFTE
Sbjct: 440 GRYMILASMYEDAGQWEDAAKVRKLLRDRNIKKPAGCSSIEVDRIHHVFGKKDETHPFTE 499

Query: 505 QIFDTLEKLEKIMDEDFESI 523
           +IFDT+EKLE++M+EDFE I
Sbjct: 500 EIFDTIEKLERLMEEDFEPI 519

BLAST of Sed0001671 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 365.5 bits (937), Expect = 6.9e-101
Identity = 175/477 (36.69%), Postives = 293/477 (61.43%), Query Frame = 0

Query: 46  HCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLW 105
           H  ++     +H  I+  G DQ+ FLATKLIG Y++ G   +  ARKVFD+  +R +++W
Sbjct: 89  HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG--SVDYARKVFDKTRKRTIYVW 148

Query: 106 NVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGA----MKNLDKGKIVHG 165
           N + +     G   E L L+ +M   G  ++R+T+ +VLKAC A    + +L KGK +H 
Sbjct: 149 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 208

Query: 166 HVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDE 225
           H+ + G    +++   ++  YA+   V+ A  VF  M +R++VSW++MI+ Y  NGK  E
Sbjct: 209 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 268

Query: 226 AIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCL 285
           A+  F  M+      SP++ T+V++L AC + +A + G  +H Y+++ G+D   P+ S L
Sbjct: 269 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 328

Query: 286 ISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDG 345
           ++MY  CG + + + VFDR+ D++V+ W+++I  YG+HG+ ++++ +F  +   G  P  
Sbjct: 329 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 388

Query: 346 VIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIE 405
           V F+++L  CSH GL+ +G+ ++  M   +G++ + EHYA MVDLLGRA  L++A + ++
Sbjct: 389 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 448

Query: 406 GMPVQAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWED 465
            M  + G  V+G+LLG+CRIH N++LA+    +LF L+P+NAG YV+LA +Y +A  W++
Sbjct: 449 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 508

Query: 466 AAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
             +++KLL  R ++K  G   +E+ R  + F   DE +P  EQI   L KL + M E
Sbjct: 509 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563

BLAST of Sed0001671 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 359.8 bits (922), Expect = 3.8e-99
Identity = 190/521 (36.47%), Postives = 299/521 (57.39%), Query Frame = 0

Query: 36  DSYDYTKLLQHCRTIRSV---QELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARK 95
           + Y +  L++    + S+   Q LH   +   +  + F+A  LI  Y   G+  +  A K
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--LDSACK 189

Query: 96  VFDRLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKN 155
           VF  + E+DV  WN +I G+   G   +AL LF +M       +  T   VL AC  ++N
Sbjct: 190 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 249

Query: 156 LDKGKIVHGHVLKCGLDLDLFVGNAMISFYAKC--------------------------- 215
           L+ G+ V  ++ +  ++++L + NAM+  Y KC                           
Sbjct: 250 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 309

Query: 216 ----RDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNA 275
                D E AREV + M  +DIV+WN++IS Y  NGK +EA+++FH  L  Q     +  
Sbjct: 310 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQI 369

Query: 276 TLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
           TLV+ L AC    A ++G W+HSY+ K G+ +   + S LI MY+ CG +  +R+VF+ V
Sbjct: 370 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 429

Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
           + ++V VWSA+I    MHG   E+++MF  ++E  +KP+GV F N+   CSH GL+ +  
Sbjct: 430 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 489

Query: 396 EIYGKMEA-YGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
            ++ +ME+ YG+  +E+HYA +VD+LGR+G+LE+AV+FIE MP+     V+GALLGAC+I
Sbjct: 490 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 549

Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
           H N+ LA+    +L  L+P N G +V+L+++Y   G+WE+ ++LRK +R   ++K  GCS
Sbjct: 550 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 609

Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTL-EKLEKIMDEDFE 521
           SIEID M H F   D +HP +E+++  L E +EK+    +E
Sbjct: 610 SIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647

BLAST of Sed0001671 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 7.4e-95
Identity = 175/517 (33.85%), Postives = 295/517 (57.06%), Query Frame = 0

Query: 36  DSYDYTKLLQHC---RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHG--------- 95
           +SY +  +L+ C   +  +  Q++H  ++  G D + ++ T LI  Y ++G         
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192

Query: 96  --EPKMGI------------------ARKVFDRLLERDVFLWNVVIQGYANWGPFAEALN 155
              P   +                  A+K+FD +  +DV  WN +I GYA  G + EAL 
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252

Query: 156 LFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCGLDLDLFVGNAMISFYA 215
           LF +M  +    +  T   V+ AC    +++ G+ VH  +   G   +L + NA+I  Y+
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312

Query: 216 KCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFHAMLHNQTVCSPDNATL 275
           KC ++ETA  +F+ +  +D++SWN++I GYT      EA++LF  ML +    +P++ T+
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTM 372

Query: 276 VAILPACVTKSASQVGFWVHSYVIK--SGMDVGAPLGSCLISMYANCGHVNIARDVFDRV 335
           ++ILPAC    A  +G W+H Y+ K   G+   + L + LI MYA CG +  A  VF+ +
Sbjct: 373 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 432

Query: 336 DDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNLLSTCSHAGLIAKGR 395
             K++  W+A+I  + MHG A+ S ++F+ + ++G++PD + F+ LLS CSH+G++  GR
Sbjct: 433 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 492

Query: 396 EIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRI 455
            I+  M + Y +  K EHY  M+DLLG +G  ++A E I  M ++    ++ +LL AC++
Sbjct: 493 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 552

Query: 456 HNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRKLLRDRNIRKPIGCS 515
           H N++L +   E L  ++PEN G YV+L+++Y  AG+W + AK R LL D+ ++K  GCS
Sbjct: 553 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 612

Query: 516 SIEIDRMHHVFGKKDESHPFTEQIFDTLEKLEKIMDE 518
           SIEID + H F   D+ HP   +I+  LE++E ++++
Sbjct: 613 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647

BLAST of Sed0001671 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 344.4 bits (882), Expect = 1.7e-94
Identity = 172/465 (36.99%), Postives = 282/465 (60.65%), Query Frame = 0

Query: 48  RTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFDRLLERDVFLWNV 107
           R I   +E+H   +  G D    ++T L+  YA+ G   +  AR++FD +LER+V  WN 
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG--SLETARQLFDGMLERNVVSWNS 309

Query: 108 VIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDKGKIVHGHVLKCG 167
           +I  Y       EA+ +F +M   G      +    L AC  + +L++G+ +H   ++ G
Sbjct: 310 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 369

Query: 168 LDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTSNGKVDEAIMLFH 227
           LD ++ V N++IS Y KC++V+TA  +F ++  R +VSWN+MI G+  NG+  +A+  F 
Sbjct: 370 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF- 429

Query: 228 AMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGAPLGSCLISMYAN 287
           + + ++TV  PD  T V+++ A    S +    W+H  V++S +D    + + L+ MYA 
Sbjct: 430 SQMRSRTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 489

Query: 288 CGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLEEVGLKPDGVIFLNL 347
           CG + IAR +FD + +++V  W+A+I  YG HGF + +L +F  +++  +KP+GV FL++
Sbjct: 490 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 549

Query: 348 LSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLEQAVEFIEGMPVQA 407
           +S CSH+GL+  G + +  M E Y +E   +HY +MVDLLGRAG L +A +FI  MPV+ 
Sbjct: 550 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 609

Query: 408 GKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILASMYEDAGQWEDAAKLRK 467
             +VYGA+LGAC+IH N+  A++  E+LF L+P++ G +V+LA++Y  A  WE   ++R 
Sbjct: 610 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 669

Query: 468 LLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEKL 512
            +  + +RK  GCS +EI    H F     +HP +++I+  LEKL
Sbjct: 670 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710

BLAST of Sed0001671 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 344.0 bits (881), Expect = 2.2e-94
Identity = 174/481 (36.17%), Postives = 287/481 (59.67%), Query Frame = 0

Query: 36  DSYDYTKLLQHCRTIRSVQELHAQIIVEGLDQNGFLATKLIGRYAEHGEPKMGIARKVFD 95
           +S  Y  +++    ++ +Q++HA +IV G  ++  L TKLI          +     +F 
Sbjct: 8   NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFL 67

Query: 96  RLLERDVFLWNVVIQGYANWGPFAEALNLFDEMRLSGEPTNRYTFPFVLKACGAMKNLDK 155
            +   D FL+N VI+  +        +  +  M  S    + YTF  V+K+C  +  L  
Sbjct: 68  SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 127

Query: 156 GKIVHGHVLKCGLDLDLFVGNAMISFYAKCRDVETAREVFDEMSMRDIVSWNSMISGYTS 215
           GK VH H +  G  LD +V  A+++FY+KC D+E AR+VFD M  + IV+WNS++SG+  
Sbjct: 128 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 187

Query: 216 NGKVDEAIMLFHAMLHNQTVCSPDNATLVAILPACVTKSASQVGFWVHSYVIKSGMDVGA 275
           NG  DEAI +F+ M   ++   PD+AT V++L AC    A  +G WVH Y+I  G+D+  
Sbjct: 188 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV 247

Query: 276 PLGSCLISMYANCGHVNIARDVFDRVDDKNVIVWSAIIRCYGMHGFAEESLNMFTSLE-E 335
            LG+ LI++Y+ CG V  AR+VFD++ + NV  W+A+I  YG HG+ ++++ +F  +E +
Sbjct: 248 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 307

Query: 336 VGLKPDGVIFLNLLSTCSHAGLIAKGREIYGKM-EAYGVERKEEHYASMVDLLGRAGFLE 395
            G  P+ V F+ +LS C+HAGL+ +GR +Y +M ++Y +    EH+  MVD+LGRAGFL+
Sbjct: 308 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 367

Query: 396 QAVEFIEGMPV---QAGKDVYGALLGACRIHNNIQLAKEVGEKLFVLDPENAGRYVILAS 455
           +A +FI  +          ++ A+LGAC++H N  L  E+ ++L  L+P+N G +V+L++
Sbjct: 368 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSN 427

Query: 456 MYEDAGQWEDAAKLRKLLRDRNIRKPIGCSSIEIDRMHHVFGKKDESHPFTEQIFDTLEK 512
           +Y  +G+ ++ + +R  +   N+RK +G S IE++   ++F   DESH  T +I+  LE 
Sbjct: 428 IYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLET 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023540099.19.5e-27887.98pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... [more]
XP_022971604.16.2e-27788.36pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... [more]
KAG6596261.11.5e-27587.79Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022942131.13.4e-27587.60pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... [more]
XP_038905146.16.8e-26885.41pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Benin... [more]
Match NameE-valueIdentityDescription
Q9STF39.7e-10036.69Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
O823805.3e-9836.47Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LN011.0e-9333.85Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q3E6Q12.3e-9336.99Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
P930113.0e-9336.17Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1I9193.0e-27788.36pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... [more]
A0A6J1FMZ91.6e-27587.60pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc... [more]
A0A6J1CVV91.6e-26785.69pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Mom... [more]
A0A0A0L1011.3e-25180.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002500 PE=4 SV=1[more]
A0A5A7UCB13.4e-24981.80Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT3G46790.16.9e-10136.69Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.13.8e-9936.47Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.17.4e-9533.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.11.7e-9436.99Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G33760.12.2e-9436.17Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 279..495
e-value: 2.4E-30
score: 108.0
coord: 17..152
e-value: 9.3E-18
score: 66.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 153..259
e-value: 3.9E-23
score: 83.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 186..463
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 308..336
e-value: 0.011
score: 16.0
coord: 379..402
e-value: 0.4
score: 11.0
coord: 279..305
e-value: 0.92
score: 9.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 104..132
e-value: 1.6E-5
score: 22.8
coord: 176..204
e-value: 5.9E-6
score: 24.1
coord: 204..232
e-value: 2.6E-7
score: 28.4
coord: 308..340
e-value: 6.1E-4
score: 17.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 101..147
e-value: 1.4E-8
score: 34.8
coord: 202..250
e-value: 1.9E-9
score: 37.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..201
score: 8.769097
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 305..339
score: 10.183105
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..236
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 101..135
score: 10.632519
NoneNo IPR availablePANTHERPTHR24015:SF1933PPR CONTAINING PLANT-LIKE PROTEINcoord: 29..519
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 29..519

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001671.1Sed0001671.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding