Sed0001666 (gene) Chayote v1

Overview


Name	Sed0001666
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CEN-like protein 2
Location	LG01: 58124536 .. 58126175 (-)
RNA-Seq Expression	Sed0001666
Synteny	Sed0001666

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTTCACAAACAAAATAATAATAATAATATAATTTTCAATTTTCTTTTCTCAATACTATTATAAATACTCCCTTCACTTCATAGAGGTAACAAAAAAACCATACATACAAATAACTAAAGTCTCTTCAAGTTTGAAACATATTCTCTATTTAGTTCTCCTTTTTTCTCTCACATATGGATGCAGCTAAGTTGAATCCTCTTGAGGTGGGCGGAGTGGTTGGAGATGTCGTCGACGCCTTCTCCCCGACGGAAAAGATGACAGTCACTTACCATTCAAACATGAAGGTCTCCAATGGCCATGAGTTGCATCCCAATTTTGTAACCCTTAAGCCTAAGGTTGAGGTTCTTGGGGGTGACCTTAGATCCTTCTTCACACTGGTCTGACCATTTTCTCCTTTTCTTTTATTTACATACATCTATATTTATATCATTTACTTATATAATTTTCAACTAATTTTGTAGGTCATGACTGACCCAGATGTTCCTGGTCCAAGTAATCCTTATTTGAGAGAGCATCTTCACTGGTATCATCACCTTTCAACTCCATTTAGAAATTTTCATAAATTGAAAAAATAATATGACAAAACAATAATGTAAAATGATATTATATATAATTGTTTTGTTTCAAGGAGCAGTCTCACTAATCAGAGTTTTGAGTTTTGATGGTGTTTTGGTCGAGTTCTCTAATTCCAAACTCACGTCTTAATTATAAAATTTCTTGTTGTCTTTTCAATCCGGATCTTTAGTCATTGGGCACAAGTGTCCCGAGTATAACGCGAAACCAAGTAGTAAGCCAAAGAGATGTTTATAGATGGCGGTCCCAATTTCTCAATTATAGAAAAAATAATTATCAATGACTTATCACTTTTAGTTGGCTATATGAAACTTAATATAACCTTTCAAACAATCTCACTCCAAACCTTATAAAGTGGGTTGAAAATTAAAGTTAGAGAAATTACAATATCTTAACCTATGTAATTTTTTCATATATGTACAACCAGTAAAATTAAACTTTGATTTCACAGGATAGTTACAGACATCCCAGGCACAACAGATTCCACATTTGGTAATTAAAACCCATTATTAATTAATTTAGTTTTCTCTCTTAATAGATTTTATTTGAATTTTGTATGAATGAATGAATGAAATGATACATTGTTGTAATGAAAATAGGAAAAGAAATAGTGAAATACGAGGTTCCAAGTCCAAAGATAGGAATCCACAGATTTGTGTTCCTTTTATACAAGCAAAAAGGAAGGCAAACAGTGAAGGGTCCTGCAGCTTCAAGTTCAAGAGATGGTTTCATTGCAAGAAAATTTGCACAAGACAATGATCTCGGCCTTCCTGTTGCTGCTGTCTATTTCAATGCCCAACGGGCTACCGCCGCCCGAAGAAGATAATAATACAAATGCCCGAAACTCTTAATAATCTTCGGACAGATCGATGGAACAAAGTTTTGGGTAATGAATCTGTATTGTTGTAGTTTTTGTTCTTTTGAATATTTGTTTTCTTTCTAATTTATGTTCGTTTGTTATGTAATTTATGTTGTCACTTGTAAGTTTGTGAACTTGTTGTTGCTCCCACTGTCATGCTTTAGCTTCTATGTTTGTGACTTTTTCCCCCTCTTTCTTGATTAC

mRNA sequence

AAAAGTTCACAAACAAAATAATAATAATAATATAATTTTCAATTTTCTTTTCTCAATACTATTATAAATACTCCCTTCACTTCATAGAGGTAACAAAAAAACCATACATACAAATAACTAAAGTCTCTTCAAGTTTGAAACATATTCTCTATTTAGTTCTCCTTTTTTCTCTCACATATGGATGCAGCTAAGTTGAATCCTCTTGAGGTGGGCGGAGTGGTTGGAGATGTCGTCGACGCCTTCTCCCCGACGGAAAAGATGACAGTCACTTACCATTCAAACATGAAGGTCTCCAATGGCCATGAGTTGCATCCCAATTTTGTAACCCTTAAGCCTAAGGTTGAGGTTCTTGGGGGTGACCTTAGATCCTTCTTCACACTGGTCATGACTGACCCAGATGTTCCTGGTCCAAGTAATCCTTATTTGAGAGAGCATCTTCACTGGATAGTTACAGACATCCCAGGCACAACAGATTCCACATTTGGAAAAGAAATAGTGAAATACGAGGTTCCAAGTCCAAAGATAGGAATCCACAGATTTGTGTTCCTTTTATACAAGCAAAAAGGAAGGCAAACAGTGAAGGGTCCTGCAGCTTCAAGTTCAAGAGATGGTTTCATTGCAAGAAAATTTGCACAAGACAATGATCTCGGCCTTCCTGTTGCTGCTGTCTATTTCAATGCCCAACGGGCTACCGCCGCCCGAAGAAGATAATAATACAAATGCCCGAAACTCTTAATAATCTTCGGACAGATCGATGGAACAAAGTTTTGGGTAATGAATCTGTATTGTTGTAGTTTTTGTTCTTTTGAATATTTGTTTTCTTTCTAATTTATGTTCGTTTGTTATGTAATTTATGTTGTCACTTGTAAGTTTGTGAACTTGTTGTTGCTCCCACTGTCATGCTTTAGCTTCTATGTTTGTGACTTTTTCCCCCTCTTTCTTGATTAC

Coding sequence (CDS)

ATGGATGCAGCTAAGTTGAATCCTCTTGAGGTGGGCGGAGTGGTTGGAGATGTCGTCGACGCCTTCTCCCCGACGGAAAAGATGACAGTCACTTACCATTCAAACATGAAGGTCTCCAATGGCCATGAGTTGCATCCCAATTTTGTAACCCTTAAGCCTAAGGTTGAGGTTCTTGGGGGTGACCTTAGATCCTTCTTCACACTGGTCATGACTGACCCAGATGTTCCTGGTCCAAGTAATCCTTATTTGAGAGAGCATCTTCACTGGATAGTTACAGACATCCCAGGCACAACAGATTCCACATTTGGAAAAGAAATAGTGAAATACGAGGTTCCAAGTCCAAAGATAGGAATCCACAGATTTGTGTTCCTTTTATACAAGCAAAAAGGAAGGCAAACAGTGAAGGGTCCTGCAGCTTCAAGTTCAAGAGATGGTTTCATTGCAAGAAAATTTGCACAAGACAATGATCTCGGCCTTCCTGTTGCTGCTGTCTATTTCAATGCCCAACGGGCTACCGCCGCCCGAAGAAGATAA

Protein sequence

MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR

Homology

[Close]

BLAST of Sed0001666 vs. NCBI nr
Match: KAG6570484.1 (CEN-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81
Identity = 150/171 (87.72%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGDV+DAFSPT KMTVTYHSN KVSNGHEL PNF+TLKPKVEVLGGDLRSFF
Sbjct: 8   DPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVLGGDLRSFF 67

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDSTFGKE+VKYEVPSP +GIHRFVFLLY
Sbjct: 68  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIHRFVFLLY 127

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 128 KQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 178

[Close]

BLAST of Sed0001666 vs. NCBI nr
Match: XP_023512960.1 (CEN-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 7.4e-81
Identity = 152/178 (85.39%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MDAAKL-NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLG 60
           M  AK+ +PL VG VVGDV+DAFSPT KMTVTYHSN KVSNGHEL PN +TLKPKVEVLG
Sbjct: 1   MAMAKMSDPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNLITLKPKVEVLG 60

Query: 61  GDLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIH 120
           GDLRSFFTLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDSTFGKE+VKYEVPSP +GIH
Sbjct: 61  GDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIH 120

Query: 121 RFVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           RFVFLLYKQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 121 RFVFLLYKQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 178

[Close]

BLAST of Sed0001666 vs. NCBI nr
Match: XP_022943720.1 (CEN-like protein 2 [Cucurbita moschata] >KAG7010349.1 CEN-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 7.4e-81
Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGDV+DAFSPT KMTVTYHSN KVSNGHEL PNF+TLKPKVEV GGDLRSFF
Sbjct: 6   DPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVFGGDLRSFF 65

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDSTFGKE+VKYEVPSP +GIHRFVFLLY
Sbjct: 66  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIHRFVFLLY 125

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 126 KQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of Sed0001666 vs. NCBI nr
Match: XP_023512961.1 (CEN-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGDV+DAFSPT KMTVTYHSN KVSNGHEL PN +TLKPKVEVLGGDLRSFF
Sbjct: 3   DPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNLITLKPKVEVLGGDLRSFF 62

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDSTFGKE+VKYEVPSP +GIHRFVFLLY
Sbjct: 63  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIHRFVFLLY 122

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 123 KQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 173

[Close]

BLAST of Sed0001666 vs. NCBI nr
Match: XP_022985790.1 (CEN-like protein 2 [Cucurbita maxima])

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-80
Identity = 147/171 (85.96%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGD++DAFSPT KMTVTYHSN KVSNGHEL PNF+TLKPKVEVLGGDLRSFF
Sbjct: 6   DPLVVGRVVGDIIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVLGGDLRSFF 65

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDS+FGKE+VKYEVPSP +GIHRFVFLL+
Sbjct: 66  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNVGIHRFVFLLF 125

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 126 KQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-65
Identity = 122/177 (68.93%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M +   +PL +G V+G+VVD F+P+ KM+VTY+S+  V NGHEL P+ VT KP+VEV GG
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           DLRSFFT++M DPDVPGPS+PYLREHLHWIVTDIPGTTD +FGKEIV YE+P P IGIHR
Sbjct: 61  DLRSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHR 120

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           FVFLL+KQK RQTV    A  SRD F  RKFA++N+LG PVAAV+FN QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTVL--TAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-64
Identity = 119/177 (67.23%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M +   +PL +G V+G+VVD F+P+ KM+VTY+S+  V NGHEL P+ VT KP+VEV GG
Sbjct: 1   MGSKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGG 60

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           DLRSFFTL+M DPDVPGPS+PYLREHLHWIVTDIPGTTD +FG+EIV YE+P P IGIHR
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHR 120

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           FVFLL+KQK RQT+   +A  SRD F  RKF+++N+LG PVAA +FN QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTLL--SAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

[Close]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.9e-64
Identity = 117/177 (66.10%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M +    PL +G V+G+VVD F P+ KM+V Y++N  V NGHE  P+ VT KP+VEV GG
Sbjct: 1   MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGG 60

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           DLRSFFTL+M DPDVPGPS+PYLREHLHWIVTDIPGTTD +FG+E+V YE+P P IGIHR
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHR 120

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           FVFLL+KQK RQT+   +A  SRD F +RKF+++N+LG PVAAV+FN QR TAARRR
Sbjct: 121 FVFLLFKQKKRQTIS--SAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

[Close]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot
Match: Q41261 (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 8.5e-64
Identity = 121/180 (67.22%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 3   AAKL--NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVS---NGHELHPNFVTLKPKVEV 62
           AAK+  +PL +G V+GDVVD F+ T KM+V Y+SN  +    NGHEL P+ VT  P+VEV
Sbjct: 2   AAKVSSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEV 61

Query: 63  LGGDLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIG 122
            GGD+RSFFTL+MTDPDVPGPS+PYLREHLHWIVTDIPGTTDS+FGKE+V YE+P P IG
Sbjct: 62  HGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIG 121

Query: 123 IHRFVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           IHRFVFLL+KQK R           RDGF  RKF Q+N+LGLPVAAV+FN QR TAARRR
Sbjct: 122 IHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

[Close]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-63
Identity = 120/171 (70.18%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG V+GDVVD      KMTVTY+S+ +V NGHEL P+ VT KPKVEV GGD+RSFF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTD +FGKEI+ YE+P P IGIHRFV+LL+
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  R +V   +  S RD F  R+FA +NDLGLPVAAV+FN QR TAARRR
Sbjct: 127 KQTRRGSV--VSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of Sed0001666 vs. ExPASy TrEMBL
Match: A0A6J1FY68 (CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.6e-81
Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGDV+DAFSPT KMTVTYHSN KVSNGHEL PNF+TLKPKVEV GGDLRSFF
Sbjct: 6   DPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVFGGDLRSFF 65

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDSTFGKE+VKYEVPSP +GIHRFVFLLY
Sbjct: 66  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSTFGKEVVKYEVPSPNVGIHRFVFLLY 125

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 126 KQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of Sed0001666 vs. ExPASy TrEMBL
Match: A0A6J1JCA0 (CEN-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111483732 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 147/171 (85.96%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG VVGD++DAFSPT KMTVTYHSN KVSNGHEL PNF+TLKPKVEVLGGDLRSFF
Sbjct: 6   DPLVVGRVVGDIIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVLGGDLRSFF 65

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDS+FGKE+VKYEVPSP +GIHRFVFLL+
Sbjct: 66  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNVGIHRFVFLLF 125

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  RQTVK PAAS+SRDGF AR+FA++N LGLPVAAVYFNAQRATAARRR
Sbjct: 126 KQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of Sed0001666 vs. ExPASy TrEMBL
Match: A0A6J1DHW3 (CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 152/177 (85.88%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M A+  +PL VG V+GDVVDAFSPT KMTVTYHSN KV NGHEL P FVTLKPKVEVLGG
Sbjct: 1   MAASMSDPLVVGRVIGDVVDAFSPTVKMTVTYHSNKKVCNGHELLPTFVTLKPKVEVLGG 60

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           DLRSFFTLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTDS+FGKE+VKYEVPSP IGIHR
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNIGIHR 120

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           FVFLL+KQK RQTVK   A +SRDGF ARKFAQDNDLGLPVAAVYFNAQRATAARRR
Sbjct: 121 FVFLLFKQKRRQTVKDLPA-NSRDGFNARKFAQDNDLGLPVAAVYFNAQRATAARRR 176

[Close]

BLAST of Sed0001666 vs. ExPASy TrEMBL
Match: A0A0A0KB52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 146/171 (85.38%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VGGVVGDVVDA SPT KMTVTYHSN KV NGHEL PNFVTLKPKVEVLGGDLRSFF
Sbjct: 7   DPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 66

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTD+TFGKEIVKYE PSP IGIHR+VFLLY
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEIVKYEEPSPNIGIHRYVFLLY 126

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQK RQTVK P    SRDGF +RKFA DN L LPVAAVYF AQR TAARRR
Sbjct: 127 KQKRRQTVK-PPPHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 176

[Close]

BLAST of Sed0001666 vs. ExPASy TrEMBL
Match: A0A1S3C8A7 (CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 143/171 (83.63%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VGGVVGDVVDA SPT KMTVTYHSN KV NGHEL PNFVTLKP+VEVLGGDLRSFF
Sbjct: 9   DPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPRVEVLGGDLRSFF 68

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHW+VTDIPGTTD+TFGKEIVKYE P P IGIHR+VFLLY
Sbjct: 69  TLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKEIVKYEEPCPNIGIHRYVFLLY 128

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQK RQTVK P    SRDGF +RKFA DN L LPVAAVYF AQR TAARRR
Sbjct: 129 KQKRRQTVK-PPPQPSRDGFNSRKFALDNHLSLPVAAVYFIAQRPTAARRR 178

[Close]

BLAST of Sed0001666 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-64
Identity = 120/171 (70.18%), Postives = 138/171 (80.70%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL VG V+GDVVD      KMTVTY+S+ +V NGHEL P+ VT KPKVEV GGD+RSFF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVMTDPDVPGPS+PYLREHLHWIVTDIPGTTD +FGKEI+ YE+P P IGIHRFV+LL+
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           KQ  R +V   +  S RD F  R+FA +NDLGLPVAAV+FN QR TAARRR
Sbjct: 127 KQTRRGSV--VSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

[Close]

BLAST of Sed0001666 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-62
Identity = 115/177 (64.97%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M    + PL +G VVGDV+D F+PT KM V+Y+   +VSNGHEL P+ V+ KP+VE+ GG
Sbjct: 4   MGTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKK-QVSNGHELFPSSVSSKPRVEIHGG 63

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           DLRSFFTLVM DPDVPGPS+P+L+EHLHWIVT+IPGTTD+TFGKE+V YE+P P IGIHR
Sbjct: 64  DLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHR 123

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           FVF+L++QK R+ +       SRD F  RKFA + DLGLPVAAV+FNAQR TAAR+R
Sbjct: 124 FVFVLFRQKQRRVIF--PNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of Sed0001666 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 219.9 bits (559), Expect = 1.6e-57
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 5   KLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRS 64
           ++ PL VG V+GDV++ F+P+  M VT++SN  VSNGHEL P+ +  KP+VE+ G DLRS
Sbjct: 4   EIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRS 63

Query: 65  FFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFL 124
           FFTL+M DPD P PSNPY+RE+LHW+VTDIPGTTD++FG+EIV+YE P P  GIHR+VF 
Sbjct: 64  FFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRYVFA 123

Query: 125 LYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           L+KQ+GRQ VK  AA  +R+ F    F+    L  PVAAVYFNAQR TA RRR
Sbjct: 124 LFKQRGRQAVK--AAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

[Close]

BLAST of Sed0001666 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 6.7e-48
Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 7   NPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGGDLRSFF 66
           +PL V  VVGDV+D F+ +  + VTY    +V+NG +L P+ V  KP+VE+ G DLR+F+
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTY-GQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 66

Query: 67  TLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHRFVFLLY 126
           TLVM DPDVP PSNP+LRE+LHW+VTDIP TT +TFG EIV YE PSP  GIHR VF+L+
Sbjct: 67  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 126

Query: 127 KQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQRATAARRR 178
           +Q GRQTV  P     R  F  R+FA+  +LGLPVAAV++N QR +    R
Sbjct: 127 RQLGRQTVYAP---GWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

[Close]

BLAST of Sed0001666 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-46
Identity = 92/170 (54.12%), Postives = 117/170 (68.82%), Query Frame = 0


Query: 1   MDAAKLNPLEVGGVVGDVVDAFSPTEKMTVTYHSNMKVSNGHELHPNFVTLKPKVEVLGG 60
           M  ++ +PL VG VVGDV+D F+    + VTY  + +V+NG +L P+ V  KP VE+ G 
Sbjct: 1   MSLSRRDPLVVGSVVGDVLDPFTRLVSLKVTY-GHREVTNGLDLRPSQVLNKPIVEIGGD 60

Query: 61  DLRSFFTLVMTDPDVPGPSNPYLREHLHWIVTDIPGTTDSTFGKEIVKYEVPSPKIGIHR 120
           D R+F+TLVM DPDVP PSNP+ RE+LHW+VTDIP TT + FG E+V YE P P  GIHR
Sbjct: 61  DFRNFYTLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHR 120

Query: 121 FVFLLYKQKGRQTVKGPAASSSRDGFIARKFAQDNDLGLPVAAVYFNAQR 171
            V +L++Q GRQTV  P     R  F  R+FA+  +LGLPVAA YFN QR
Sbjct: 121 IVLVLFRQLGRQTVYAP---GWRQQFNTREFAEIYNLGLPVAASYFNCQR 166

The following BLAST results are available for this feature:

BLAST of Sed0001666 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570484.1	2.5e-81	87.72	CEN-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023512960.1	7.4e-81	85.39	CEN-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022943720.1	7.4e-81	87.13	CEN-like protein 2 [Cucurbita moschata] >KAG7010349.1 CEN-like protein 2, partia...	[more]
XP_023512961.1	1.3e-80	87.13	CEN-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022985790.1	2.8e-80	85.96	CEN-like protein 2 [Cucurbita maxima]	[more]

BLAST of Sed0001666 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH43	1.5e-65	68.93	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]
Q9XH42	2.2e-64	67.23	CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1	[more]
O82088	2.9e-64	66.10	Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1	[more]
Q41261	8.5e-64	67.22	Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1	[more]
Q9ZNV5	2.5e-63	70.18	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1	[more]

BLAST of Sed0001666 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY68	3.6e-81	87.13	CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1	[more]
A0A6J1JCA0	1.4e-80	85.96	CEN-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111483732 PE=3 SV=1	[more]
A0A6J1DHW3	1.5e-79	85.88	CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1	[more]
A0A0A0KB52	1.0e-75	85.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1	[more]
A0A1S3C8A7	1.5e-74	83.63	CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1	[more]

BLAST of Sed0001666 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27550.1	1.8e-64	70.18	centroradialis	[more]
AT5G03840.1	4.8e-62	64.97	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.6e-57	60.69	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	6.7e-48	56.14	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	2.8e-46	54.12	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 2..177 e-value: 3.4E-55 score: 188.4
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 8..171
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 63..165 e-value: 3.8E-13 score: 49.9
None	No IPR available	PANTHER	PTHR11362:SF48	PROTEIN CENTRORADIALIS-LIKE	coord: 5..176
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 5..176
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 27..166 e-value: 5.94133E-44 score: 140.972
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 66..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001666.1	Sed0001666.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003712	transcription coregulator activity