Sed0001658 (gene) Chayote v1

Overview
NameSed0001658
Typegene
OrganismSechium edule (Chayote v1)
DescriptionReactive oxygen species modulator 1
LocationLG01: 60769962 .. 60772884 (+)
RNA-Seq ExpressionSed0001658
SyntenySed0001658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACAGATAGCTGCTTGGCACGAGTTACCACCGGAGTTGCTGTCGGCGGCGCTGTCGGCGGAGCCGTCGGTAAGCAAAACCCTAATAATTTTTTCAAACTTCTATCGTCTTTTCTTGACTATCTCTGTTCTTCGCTGTTTCCTTTTGTTTTCTTAGTTTCTAGTATTTCGATATGGTTTGAATGTTGTTTAGCTTGCTCGTTGGTTAAATTGTGTTCAGTTATTCAGGAATTTGGGTTTTTGGTCCAGTTGCGTCTGTGGTTCAATCATGTTTTTCATTGATAACACCTTAATGTAACCTTGAATACCTCATAGAATTCTTTTGTCTAATCTGTTATGAAATCAGATTCAACAATAAATGAAATGTGTGAAAAAAACCTTTAAACAAGAAGATTACATGGTTGGCTAACGAAAAAAGTGTTAGTACTTCCACGGGCAGAAGCAATGACGATTTATTAATTAGAAAATAATGTCGATCAACTGGGGCTAGAGTTTTGTGAGAGTTCATATGGTGCACTCTTAAAACACCCTTATGAGAGATTAAGTAATCATGGGGTGTAAACAGTTCAAGGCATATCTCAATATAATCTTTCATTTTGAAGTTTGGACTGTCAATTGCTTGTGGACATAACTTTGTTCTGTAGAAAGAGTTCTTTACTTTCTATTGCCTATTAATTATCTTTTTATGCTTTTGGAGGTCCTATGGTAGACTCGTCTTGTTAAGTATTGAGTCAACTAATCTTATGTTTTGGGTTTGTTGTACTTCATTGGCTTGTTCTGTGTATACTGTAAACCTCACAAAGTTGATTTAATCTTGTATTAAAGCATGTACCCTGGCCATTATCCTTTATTATTCGTCCCGGAATGTACCGAGTCTTTTAAGAAGCTCTTGGTTTTCTTTCTCAGTTTTCAATCTATTAGACTGTCAAACATTATGAACTAGCCAATGCCACTCTTTTGAAGAAAAATATCAGTAATGAAGCCTTTGTAAACAACAATCTGGGCTGTCACTTTTTCTTTTTAATATTGATCTTGGACGGCTTTAAGTCTAAGTAGCAATATATTTTCTCCTATCCCCTCACCCGATAGTTTATTTCCATGTATTCTTTCAGGTGGGTGCTATAGTTGTAAGTTGTAACTGATTCAATCTGTTAAATCCTACTATGATATGTTTTGCTTAGCGTTCTAGAACTAACTTTTTGTTTTTCTCTAGGTGCTGTGTATGGGACTTACGAGGCCATTAGGTTTAAGGTATATTATCTTATCTGATCCTAATCTTAAAAAAATCAGACTTGGAATTCAACCTCCATCCATCTGCTTTAGATTTCAGTAAAAATCTTATCAAATTGTTATTAATAGTTAATCCTTTTCCATTTATTTTTTTAACAACTAATTAATATTGTCATATTTTAAATATGCTTGTATAAGATTCCATCTACTACCTCATTATGAATCATGGAAAACTACCAAAGTTATGTTTTATTAGCATGGGATTGAAGTGAAACAAGATTACTTCACATTTAAACTTTTTGGAAACTAATTTAGTGATCTTCTTCCATCTGCTTTAGTTAAAAGAACAAAGTGGTCAATAGATGATGGTGGGGATACGGCTTCACCCTACTTTGATGCCTTTTTGGTCAAGTATTTGATCAAATTTAAAATATTTTAATTATTTTATTTTTTAAGCACCATCAATGTTGTTTCATATCAACATATGTATTTGGCATGCATTTTTTATTGGGTTCAAATAATTGGATTCTCAAAATTTTATTGTACTAAAACAAATATCAGCATATGTATTTTTATTTTAAACTATTCTTCTCAAGAACACTCTTCAACGCTTTGTTCAAAAAAAAAAAAGAACGCTATTAAATATCTCTTCTAATAAGCTTTAGTCAAGGAGTATTAATTTGCAAGGATGATCCATCCACATGATATATTTTTCAATTAATTTTTAACGATAACCTTCAATTAATTTGTTGATAGATTTGATTAGCTATTCGATAAAATTTGATTTGATTAAAAAAAGGAGTAAGATTGGAATTTTTTTCATAAAAAAAATCAAAATCAAAATCGAGTATAAACAAAATATTTTAGGAAAAATGTTACAGTTATAATATATCAATAGCAATTTCTATCTATTTTTTTTAATAAGGGGGTGTCCTTCAGTCATTTTAAAATTTTGACAATCACTTTAGCTATATATGCCTTTTTAAATCATTTTGCAACTAACAAAACTCGTTTAATCTCTTACCTTTGACCACAAAATCTCCTATCAATAACTATTTACTTTTTATTCTAAAAAAAAAAAAACTATTTACTTTTTAAAATTTAAACTACGTCAACTAATTTAAATTATAATTTTCATTAATTCGATATCTACCTTTTACTTTGAAAAGTAAAAAAGAGAACTTTCAAATGCTTATTTGATTTATCAATTTTGGTTAGAATTCACATACTTTTTTTTTAGAAAAGATAAAATCATATTTAGAGAATTTGAATAAATATAAAGTTAAATTTTAAAAACTAACTACAAAAAATCAAATGATTATCACATAGAATTTTAATGTTTTATCTTCAGTTGACATGTTAAAAGAAAGTTATACAGCATGATTTTTTTTGAAAAGGTGCTCATACACATATACTCCTAAAATAGGTGAATTACGTTGTCATGTAATCTATATTATATACCATATGTTTCATGTTTTGCCTACAAAAATAAAGTTCTAATGGGTTGTAAATAGAATACAATTTGAGATGAAGCTCTCCCTCTTTCTAACCGTTAGAGAGAGAAGCTCTCTTGGAGGGCTCACAGATGACTTCTATGGAGAGAGAAACATTCGGTGCATTTTTGGGCTTTGCTCTACTCTCTCTTGAGAGTGGATTGTCTGGAGCTCGTCTGGAGTTGATGGGTGGTTGA

mRNA sequence

ATGGCTACAGATAGCTGCTTGGCACGAGTTACCACCGGAGTTGCTGTCGGCGGCGCTGTCGGCGGAGCCGTCGGTAAGCAAAACCCTAATAATTTTTTCAAACTTCTATCGTCTTTTCTTGACTATCTCTGTTCTTCGCTGTTTCCTTTTGTTTTCTTAGAATTTGGGTTTTTGGTCCAGTTGCGTGCTGTGTATGGGACTTACGAGGCCATTAGGTTTAAGAGAGAAGCTCTCTTGGAGGGCTCACAGATGACTTCTATGGAGAGAGAAACATTCGGTGCATTTTTGGGCTTTGCTCTACTCTCTCTTGAGAGTGGATTGTCTGGAGCTCGTCTGGAGTTGATGGGTGGTTGA

Coding sequence (CDS)

ATGGCTACAGATAGCTGCTTGGCACGAGTTACCACCGGAGTTGCTGTCGGCGGCGCTGTCGGCGGAGCCGTCGGTAAGCAAAACCCTAATAATTTTTTCAAACTTCTATCGTCTTTTCTTGACTATCTCTGTTCTTCGCTGTTTCCTTTTGTTTTCTTAGAATTTGGGTTTTTGGTCCAGTTGCGTGCTGTGTATGGGACTTACGAGGCCATTAGGTTTAAGAGAGAAGCTCTCTTGGAGGGCTCACAGATGACTTCTATGGAGAGAGAAACATTCGGTGCATTTTTGGGCTTTGCTCTACTCTCTCTTGAGAGTGGATTGTCTGGAGCTCGTCTGGAGTTGATGGGTGGTTGA

Protein sequence

MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQLRAVYGTYEAIRFKREALLEGSQMTSMERETFGAFLGFALLSLESGLSGARLELMGG
Homology
[Close]
BLAST of Sed0001658 vs. NCBI nr
Match: KAF7824716.1 (reactive oxygen species modulator 1 [Senna tora])

HSP 1 Score: 61.2 bits (147), Expect = 6.7e-06
Identity = 45/100 (45.00%), Postives = 52/100 (52.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCL RVTTG A+GGA+GGAVG               ++L      FVFLE      
Sbjct: 1  MARDSCLTRVTTGAALGGAIGGAVG---------------EHLLELSSIFVFLE------ 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEA+R+K   LL+     Q T      FG FLG
Sbjct: 61 -GAVYGTYEAVRYKVPGLLKIRHIGQTTLGSAAVFGLFLG 78

[Close]
BLAST of Sed0001658 vs. NCBI nr
Match: RWR74423.1 (reactive oxygen species modulator 1 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-05
Identity = 44/100 (44.00%), Postives = 46/100 (46.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVTTGVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTTGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIR+K   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRYKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. NCBI nr
Match: XP_042484967.1 (reactive oxygen species modulator 1 [Macadamia integrifolia])

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 43/100 (43.00%), Postives = 46/100 (46.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVTTGVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTTGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIR+K   L++     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRYKVPGLMKIRYVGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. NCBI nr
Match: XP_022764384.1 (uncharacterized protein LOC111309649 [Durio zibethinus])

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-04
Identity = 43/100 (43.00%), Postives = 46/100 (46.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVTTGVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTTGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            +VYGTYEAIR+K   LL+     Q T      FG FLG
Sbjct: 61 --SVYGTYEAIRYKVPGLLKIRYIGQTTLSSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. NCBI nr
Match: XP_004140202.2 (reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED: reactive oxygen species modulator 1 [Cucumis melo] >XP_022152962.1 reactive oxygen species modulator 1 [Momordica charantia] >XP_022943286.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita moschata] >XP_022986427.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita maxima] >XP_023511835.1 reactive oxygen species modulator 1 [Cucurbita pepo subsp. pepo] >XP_038900697.1 reactive oxygen species modulator 1 [Benincasa hispida] >KAG6570413.1 Reactive oxygen species modulator 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010289.1 Reactive oxygen species modulator 1 [Cucurbita argyrosperma subsp. argyrosperma] >KGN48107.1 hypothetical protein Csa_003706 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-04
Identity = 44/100 (44.00%), Postives = 45/100 (45.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVT GVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIRFK   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match: A0A443N7C8 (Reactive oxygen species modulator 1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00275000 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.7e-05
Identity = 44/100 (44.00%), Postives = 46/100 (46.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVTTGVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTTGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIR+K   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRYKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match: A0A6P6AHP2 (uncharacterized protein LOC111309649 OS=Durio zibethinus OX=66656 GN=LOC111309649 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.1e-05
Identity = 43/100 (43.00%), Postives = 46/100 (46.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVTTGVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTTGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            +VYGTYEAIR+K   LL+     Q T      FG FLG
Sbjct: 61 --SVYGTYEAIRYKVPGLLKIRYIGQTTLSSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match: A0A6J1J7H7 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484176 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.0e-05
Identity = 44/100 (44.00%), Postives = 45/100 (45.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVT GVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIRFK   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match: A0A0A0KIA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.0e-05
Identity = 44/100 (44.00%), Postives = 45/100 (45.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVT GVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIRFK   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match: A0A6J1DHP0 (reactive oxygen species modulator 1 OS=Momordica charantia OX=3673 GN=LOC111020576 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.0e-05
Identity = 44/100 (44.00%), Postives = 45/100 (45.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA DSCLARVT GVAVGGAVGGAVG                                   
Sbjct: 1  MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLE---GSQMTSMERETFGAFLG 98
            AVYGTYEAIRFK   LL+     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLG 63

[Close]
BLAST of Sed0001658 vs. TAIR 10
Match: AT3G07910.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06
Identity = 38/100 (38.00%), Postives = 43/100 (43.00%), Query Frame = 0 

Query: 1  MATDSCLARVTTGVAVGGAVGGAVGKQNPNNFFKLLSSFLDYLCSSLFPFVFLEFGFLVQ 60
          MA +SCLA++T GVAVGGA+GGAVG                                   
Sbjct: 1  MAKNSCLAKITAGVAVGGALGGAVG----------------------------------- 60

Query: 61 LRAVYGTYEAIRFKREALLEG---SQMTSMERETFGAFLG 98
            AVYGTYEAIR K   L +     Q T      FG FLG
Sbjct: 61 --AVYGTYEAIRVKVPGLHKVRFIGQTTLSSAAIFGLFLG 63

The following BLAST results are available for this feature:
BLAST of Sed0001658 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF7824716.16.7e-0645.00reactive oxygen species modulator 1 [Senna tora][more]
RWR74423.19.7e-0544.00reactive oxygen species modulator 1 [Cinnamomum micranthum f. kanehirae][more]
XP_042484967.11.3e-0443.00reactive oxygen species modulator 1 [Macadamia integrifolia][more]
XP_022764384.11.3e-0443.00uncharacterized protein LOC111309649 [Durio zibethinus][more]
XP_004140202.21.7e-0444.00reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED:... [more]
BLAST of Sed0001658 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0001658 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A443N7C84.7e-0544.00Reactive oxygen species modulator 1 OS=Cinnamomum micranthum f. kanehirae OX=337... [more]
A0A6P6AHP26.1e-0543.00uncharacterized protein LOC111309649 OS=Durio zibethinus OX=66656 GN=LOC11130964... [more]
A0A6J1J7H78.0e-0544.00reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0KIA08.0e-0544.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=3 SV=1[more]
A0A6J1DHP08.0e-0544.00reactive oxygen species modulator 1 OS=Momordica charantia OX=3673 GN=LOC1110205... [more]
BLAST of Sed0001658 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07910.17.2e-0638.00FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001658.1Sed0001658.1mRNA