Sed0001629 (gene) Chayote v1

Overview


Name	Sed0001629
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Non-specific lipid-transfer protein
Location	LG02: 31795898 .. 31796826 (-)
RNA-Seq Expression	Sed0001629
Synteny	Sed0001629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGAAGAGAAAAGGGTAATTAGTGAATTGGAAAAACGCATGAAAAGAAAAGGGTCCAGCAGTGAGGGCTCAACTACCACCCACCTCCCTTACGGCTTGCCTCATAAATGAAGAAGAGGTAGGATAGGCTATATAAACAAGGAGACCCAACATCGTTTCAACCACGGCAGCAACAAAATTTAGAACGCAATCAAATATCAAGAAGAGAGGGAAAGATTGAAAAGATATGGAGATGAAGATGAAGATGATCCTGGGAATGGTGATGATGTGCATGGTTGTGAGCGAAGCGGCTGTGACATGCGGCACAGTGGCGTCCGCAGTGGCCCCGTGCATCTCTTATTTGAAGGCAGGAGGAGCGAGCCCCCCTCAGGCCTGCTGCAGTGGCATTAGGAGTCTTAACAGCCAAGCCTCCACCACCGCTGATCGCCGCACCGCTTGCAAATGCTTGAAGTCTGCTGCCAGTTCCATCTCCGGCATCAACTTTTCGGTCGCCTCTTCCCTTCCTCGTAAATGTGGCGTCAGCGTTCCTTACCAGATCAGTCCCAGCACGGACTGCTCCAAGTATGTGTATTCTCACTATCCTCTACCTAATTTCATAATATATATTTGAATACCTTCAAAGCTAATTTCAACTTCTTCTTTTTGCAGAGTTAACTAAGGAACCCTAATTCAACATCAAGTATCATCCTATTAGGTAGCTTAATTAATATATGCAATACCAGAATAAAATTGCATGGGCCGGTGCTTTGCTGATTTCCCATGCCGGGATCCGCTGTTTTGCCACTATGTACTCATCCTATCTTTTATTTTTCATCAACTGTACTGCCTTTTATTTCTCTTCTGTTATGTACTCTATGGAATTTCAATGATGATGTGCATGTCATTTGCGAATTCCAATTTATAATTATTTATCATCTCTATTTCCCTT

mRNA sequence

ATTTGAAGAGAAAAGGGTAATTAGTGAATTGGAAAAACGCATGAAAAGAAAAGGGTCCAGCAGTGAGGGCTCAACTACCACCCACCTCCCTTACGGCTTGCCTCATAAATGAAGAAGAGGTAGGATAGGCTATATAAACAAGGAGACCCAACATCGTTTCAACCACGGCAGCAACAAAATTTAGAACGCAATCAAATATCAAGAAGAGAGGGAAAGATTGAAAAGATATGGAGATGAAGATGAAGATGATCCTGGGAATGGTGATGATGTGCATGGTTGTGAGCGAAGCGGCTGTGACATGCGGCACAGTGGCGTCCGCAGTGGCCCCGTGCATCTCTTATTTGAAGGCAGGAGGAGCGAGCCCCCCTCAGGCCTGCTGCAGTGGCATTAGGAGTCTTAACAGCCAAGCCTCCACCACCGCTGATCGCCGCACCGCTTGCAAATGCTTGAAGTCTGCTGCCAGTTCCATCTCCGGCATCAACTTTTCGGTCGCCTCTTCCCTTCCTCGTAAATGTGGCGTCAGCGTTCCTTACCAGATCAGTCCCAGCACGGACTGCTCCAAAGTTAACTAAGGAACCCTAATTCAACATCAAGTATCATCCTATTAGGTAGCTTAATTAATATATGCAATACCAGAATAAAATTGCATGGGCCGGTGCTTTGCTGATTTCCCATGCCGGGATCCGCTGTTTTGCCACTATGTACTCATCCTATCTTTTATTTTTCATCAACTGTACTGCCTTTTATTTCTCTTCTGTTATGTACTCTATGGAATTTCAATGATGATGTGCATGTCATTTGCGAATTCCAATTTATAATTATTTATCATCTCTATTTCCCTT

Coding sequence (CDS)

ATGGAGATGAAGATGAAGATGATCCTGGGAATGGTGATGATGTGCATGGTTGTGAGCGAAGCGGCTGTGACATGCGGCACAGTGGCGTCCGCAGTGGCCCCGTGCATCTCTTATTTGAAGGCAGGAGGAGCGAGCCCCCCTCAGGCCTGCTGCAGTGGCATTAGGAGTCTTAACAGCCAAGCCTCCACCACCGCTGATCGCCGCACCGCTTGCAAATGCTTGAAGTCTGCTGCCAGTTCCATCTCCGGCATCAACTTTTCGGTCGCCTCTTCCCTTCCTCGTAAATGTGGCGTCAGCGTTCCTTACCAGATCAGTCCCAGCACGGACTGCTCCAAAGTTAACTAA

Protein sequence

MEMKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN

Homology

[Close]

BLAST of Sed0001629 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +I+G+V+MCMVV EAA++CGTVA +V+PCISYLK   +  P ACC+GIRSLNSQAS
Sbjct: 5   MKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ DRRTAC CLKSAA+SISGINF+ ASSLP KCGVS+PY+ISPSTDCSKVN
Sbjct: 65  TSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Sed0001629 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 4.6e-36
Identity = 82/112 (73.21%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +++G+V+MCMVV EAA++CGTVAS+VAPCI YL+      P ACCSGIRSLNSQAS
Sbjct: 5   MKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ADRRTAC CLKSAA+S+SGIN++ ASSLP KCGVS+PY+ISPSTDC+KVN
Sbjct: 65  TSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Sed0001629 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.5 bits (397), Expect = 6.7e-35
Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +I+G+V+MCMVV EAA+TCG VAS+VAPCI YLK   +  P ACC+GIRSLNSQAS
Sbjct: 5   MKMAIIVGVVLMCMVVGEAAITCGAVASSVAPCIPYLKNPSSGVPAACCNGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ DRRTAC CLKSAASSI GINF+ ASSLP +CGV +PY+ISPSTDC+KVN
Sbjct: 65  TSVDRRTACTCLKSAASSIPGINFNAASSLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Sed0001629 vs. NCBI nr
Match: KAG6580430.1 (hypothetical protein SDJN03_20432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.1 bits (388), Expect = 7.4e-34
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +I+G+V+MCMVVSEAA+TCG V S++APCI YLK   +  P ACC+GIRSLNSQAS
Sbjct: 5   MKMAIIVGVVLMCMVVSEAAITCGAVVSSLAPCIPYLKNPSSGVPAACCNGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ DRR AC CLKSAA+SISGINF+ AS+LP +CGV +PY+ISPSTDC+KVN
Sbjct: 65  TSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Sed0001629 vs. NCBI nr
Match: KAG7017187.1 (hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 4.8e-33
Identity = 77/112 (68.75%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +I+G+V+MCMVV EAA+TCG V +++APCI YLK   +  P ACC+GIRSLNSQAS
Sbjct: 5   MKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ DRR AC CLKSAA+SISGINF+ AS+LP +CGV +PY+ISPSTDC+KVN
Sbjct: 65  TSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-29
Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 8   ILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADR 67
           ++ +V++    SEAA++CG VASA+APCISY +  G+ P   CCSG+RSLN+ A TTADR
Sbjct: 14  VVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADR 73

Query: 68  RTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           R AC CLK+AA+ +SG+N   A+S+P KCGVS+PY IS STDCS+VN
Sbjct: 74  RAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120

[Close]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-28
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 21  AAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTACKCLKSAASS 80
           AA++CG V SAV+PC+SY + GG+ P  ACCSG+RSLNS ASTTADRRTAC CLK+ A S
Sbjct: 26  AAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGS 85

Query: 81  ISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           ISG+N   A+S+P KCGVS+PY ISPS DCS VN
Sbjct: 86  ISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118

[Close]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-28
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 21  AAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTACKCLKSAASS 80
           AA++CG V SAV+PC+SY + GG+ P  ACCSG+RSLNS ASTTADRRTAC CLK+ A S
Sbjct: 26  AAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGS 85

Query: 81  ISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           ISG+N   A+S+P KCGVS+PY ISPS DCS VN
Sbjct: 86  ISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118

[Close]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-28
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 21  AAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTACKCLKSAASS 80
           AA++CG V SAV+PC+SY + GG+ P  ACCSG+RSLNS A+TTADRRTAC CLK+ A S
Sbjct: 25  AAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGS 84

Query: 81  ISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           ISG+N   A+S+P KCGVS+PY ISPS DCS VN
Sbjct: 85  ISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 117

[Close]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot
Match: Q43194 (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-27
Identity = 62/103 (60.19%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 12  VMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTAC 71
           V++    SEAAVTCG V+SA+ PC+SY +  G+ P   CCSG+RSLNS A TTADRR AC
Sbjct: 20  VVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAAC 79

Query: 72  KCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
            CLK+AA  I G+N   A+S+P KCGVS+PY IS STDCS+V+
Sbjct: 80  NCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRVS 122

[Close]

BLAST of Sed0001629 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +I+G+V+MCMVV EAA++CGTVA +V+PCISYLK   +  P ACC+GIRSLNSQAS
Sbjct: 5   MKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ DRRTAC CLKSAA+SISGINF+ ASSLP KCGVS+PY+ISPSTDCSKVN
Sbjct: 65  TSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Sed0001629 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36
Identity = 82/112 (73.21%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 3   MKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAS 62
           MKM +++G+V+MCMVV EAA++CGTVAS+VAPCI YL+      P ACCSGIRSLNSQAS
Sbjct: 5   MKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLNSQAS 64

Query: 63  TTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T+ADRRTAC CLKSAA+S+SGIN++ ASSLP KCGVS+PY+ISPSTDC+KVN
Sbjct: 65  TSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Sed0001629 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.2e-33
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MEMKMK--MILGMVMMCMVV-SEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSL 60
           MEMK+K  MI+G+VMMCMVV  EAAVTCG+VA+A+ PCI YL++  AS P  CCSGIRSL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 61  NSQASTTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           N QA+TTADRRTAC CLKSAA SISGIN+  A+ LP KCGVS+ Y ISP+TDCS+VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Sed0001629 vs. ExPASy TrEMBL
Match: A0A1S3B5F4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.2e-33
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MEMKMK--MILGMVMMCMVV-SEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSL 60
           MEMK+K  MI+G+VMMCMVV  EAAVTCG+VA+A+ PCI YL++  AS P  CCSGIRSL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 61  NSQASTTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           N QA+TTADRRTAC CLKSAA SISGIN+  A+ LP KCGVS+ Y ISP+TDCS+VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Sed0001629 vs. ExPASy TrEMBL
Match: A0A0A0LF44 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.0e-30
Identity = 79/121 (65.29%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 1   MEMKMK-----MILGMVMMCMVV--SEAAVTCGTVASAVAPCISYLKAGGASPPQACCSG 60
           MEMK+K      I+G+VMMCMVV    A +TCG VAS+V+ CI YL++     PQ CC+G
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  IRSLNSQASTTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKV 115
           IRSLNSQASTT DRR AC CLK+AA SI GIN+  A+SLP KCGVSVPY+ISPSTDC+KV
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120

[Close]

BLAST of Sed0001629 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 111.7 bits (278), Expect = 3.9e-25
Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 11  MVMMCMVVS-EAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRT 70
           ++ +C+V S +AA++CGTVA ++APC +YL  GG  PP +CC+G+++LNS A TT DR+ 
Sbjct: 12  VLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPP-SCCAGVKTLNSMAKTTPDRQQ 71

Query: 71  ACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKV 114
           AC+C++S A SISG+N S+AS LP KCGVS+PY IS ST+C+ +
Sbjct: 72  ACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Sed0001629 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 56/115 (48.70%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 1   MEMKMKMILGMVMMCMVVS--EAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLN 60
           M   ++     V+   +V+  +AA+TCGTVAS+++PC+ YL  GG  PP  CC+G++ LN
Sbjct: 1   MAFALRFFTCFVLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPP-PCCAGVKKLN 60

Query: 61  SQASTTADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKV 114
             A TT DR+ AC+CL+SAA    G+N S+AS LP KCGVS+PY IS ST+C+ +
Sbjct: 61  GMAQTTPDRQQACRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of Sed0001629 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-19
Identity = 51/114 (44.74%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 1   MEMKMKMILGMVMMCMVVSEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQ 60
           M++   ++  M++   + S AA++CG+V S +A CI Y+  GG  PP ACCSG+++LNS 
Sbjct: 5   MKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPP-ACCSGVKNLNSI 64

Query: 61  ASTTADRRTACKCLKSAASSI-SGINFSVASSLPRKCGVSVPYQISPSTDCSKV 114
           A TT DR+ AC C++ AA ++ SG+N   A+ +P+ CGV++PY+IS ST+C  V
Sbjct: 65  AKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of Sed0001629 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 39/95 (41.05%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 19  SEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQASTTADRRTACKCLKSAA 78
           SE+A++C  V   + PC+SYL +G  +PP+ CC G++SL +  +T+AD++ AC+C+KS A
Sbjct: 22  SESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVA 81

Query: 79  SSISGINFSVASSLPRKCGVSVPYQISPSTDCSKV 114
           +S++ +   +A +L   CG S+P   SP+ DC+ V
Sbjct: 82  NSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of Sed0001629 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-17
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 12  VMMCMVV--------SEAAVTCGTVASAVAPCISYLKAGGASPPQACCSGIRSLNSQAST 71
           ++ C++V        +E+ + CGTV S +A C++YL   G  P Q CC G++SL   A T
Sbjct: 7   IITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQT 66

Query: 72  TADRRTACKCLKSAASSISGINFSVASSLPRKCGVSVPYQISPSTDCSKVN 115
           T DR+  C+CLK A   I G+N  + ++LP  CGVS+PY IS ST+C  ++
Sbjct: 67  TPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116

The following BLAST results are available for this feature:

BLAST of Sed0001629 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935125.1	2.7e-36	75.00	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]
XP_022982607.1	4.6e-36	73.21	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_023528122.1	6.7e-35	73.21	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580430.1	7.4e-34	70.54	hypothetical protein SDJN03_20432, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7017187.1	4.8e-33	68.75	hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0001629 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19656	3.3e-29	58.88	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]
Q7XJ39	2.2e-28	68.09	Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2ZAT0	2.2e-28	68.09	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2QYL2	4.8e-28	67.02	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q43194	1.4e-27	60.19	Non-specific lipid-transfer protein 2 OS=Sorghum bicolor OX=4558 GN=LTP2 PE=3 SV...	[more]

BLAST of Sed0001629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Q5	1.3e-36	75.00	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11144208...	[more]
A0A6J1IX25	2.2e-36	73.21	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]
A0A5D3DMS3	5.2e-33	70.94	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B5F4	5.2e-33	70.94	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3...	[more]
A0A0A0LF44	7.0e-30	65.29	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 P...	[more]

BLAST of Sed0001629 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59320.1	3.9e-25	54.81	lipid transfer protein 3	[more]
AT5G59310.1	1.2e-21	48.70	lipid transfer protein 4	[more]
AT2G38540.1	5.5e-19	44.74	lipid transfer protein 1	[more]
AT2G18370.1	1.8e-17	41.05	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G51590.1	2.3e-17	41.44	lipid transfer protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 24..40 score: 54.03 coord: 66..81 score: 58.46 coord: 101..112 score: 60.64 coord: 45..59 score: 49.44 coord: 83..100 score: 47.01
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 2..111
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 92..113
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 25..110 e-value: 4.0E-15 score: 66.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 25..110 e-value: 1.8E-10 score: 41.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 22..114 e-value: 5.6E-33 score: 115.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 22..113
None	No IPR available	PANTHER	PTHR33076:SF76	NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED	coord: 2..111
None	No IPR available	CDD	cd01960	nsLTP1	coord: 23..111 e-value: 1.0613E-40 score: 128.236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001629.1	Sed0001629.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008289	lipid binding