Sed0001600 (gene) Chayote v1

Overview


Name	Sed0001600
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin
Location	LG08: 32545650 .. 32547238 (-)
RNA-Seq Expression	Sed0001600
Synteny	Sed0001600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCATCAGCCAATTTGCGATTCTTCTTCTTCTTCTTCCCCTGAATTTCCCTTGCCGTCTGTCCCAATTCTCCGGCAATGATCGGGTGCGTAAACAAGGGCGTATCGACCGAACTGCCTCCTTCGCCGACCTCTTCGTGTTCTTCGCTATCCATCGACGTGGAAGAGTCGTGTGAAACTCGGATCCGGCGGCTGATTACGGAGCATCCGGTCATCATATTCAGCCTCTCCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCACCATCGGCGTCCATCCCACCGTTATTGAGCTTGAAGATCGCCACGAAATCGCTGCCGTTCCCTCGTCCCCATCGTTTGCTCGGGATTGCTCCGCACCCACGGTTTTCATCGGCGGCGATTGCTTCGGCGGCTTGGAGACTCTCATTGCTCTCCATATTAGTGGCCATCTTGTTCCCAAACTCATCCAAGTTGGAGCTCTCCAGGTATAACCTTTAATGATATTATATACGATTTAATAACTATAAAATTACAACTTCTAATTCATTTCAGATATCGATAAATATATAAACAGATGTTGAGTACCAACAAAAGTGATAATCATAAATGCATAAGTTTGAATCCTCCCCTTTTTATTTAATAATATTTGAAAAGATTTGAACCAATAAACTTGTAGAATAATCAAAATTGAAGTTCATCTAAAAAATCAATACTCTTGAACTTAATACCTTCATGAGGAAAGCACCACAAAGTTGAGCCATTCAATCATGCATACCCCTAAGTAATTGTACTTTCTTTAGAATGATTTCTAAGGTATATATGAGAAATTTTGTTCTTGAGATTTTGAAAACTAAAAAGTAAAACAAATTTTTTTTTAGTGAAAATAATTTTACACAAACTTTTAGCCAACAAGATTAATACCTCATTATGAACTTTCAAAAAGATCATGGTGATAATCTTCCACTCAATGTTTGAATTTTCAAAATAATAAAATTCTAGTCTCAATTTTTTATTAATATATATATATTATTTTATTTTATTGGTTTCAAGGTATGCGTTATGATTGAATTAATATTCCTTAGAGTTAAAAAATAAAGACCCAAGTAAAGTTGGTATCCAGTCTTGTACGTTTCCAATCTGAATAAAAAAAAATAAAGAACACCCAAGTAAAGTTCTAACATTTTATTATTATTTCTTTTGTAGTTCATCAACATATTATATTTTTAAAACAAGGAATCAAAATGGATTCTATCAATTTAATTTGTTTAGTTAAAAGTAAAATGAAATAGAAATTTGTGTTTGAGAAATGATATTGTAAAAGGTGCAGGTGGGACACGTGCAGTGTTGAAGATTGGTGCCTTGCACGTGCGAGTCAGAAGAAAAGTGATTGGTGGGGGGTAGTTTTGTAATTATAGGCAAATTCTCTCGTCACCACTCTAGAATGTGTGGGTATCTCATTGTAGCTTAAGCCTTAAAGATTCTCCTATTGCCCAAAAAGGGAGCTTTTACTTTTACTTCTTTCCTGTAATGACTAATAAAGTCTATAACTACCACCATGTTTATGTATGATTTAATAATTAAAATATAATATTTTGGATCA

mRNA sequence

TCCTCATCAGCCAATTTGCGATTCTTCTTCTTCTTCTTCCCCTGAATTTCCCTTGCCGTCTGTCCCAATTCTCCGGCAATGATCGGGTGCGTAAACAAGGGCGTATCGACCGAACTGCCTCCTTCGCCGACCTCTTCGTGTTCTTCGCTATCCATCGACGTGGAAGAGTCGTGTGAAACTCGGATCCGGCGGCTGATTACGGAGCATCCGGTCATCATATTCAGCCTCTCCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCACCATCGGCGTCCATCCCACCGTTATTGAGCTTGAAGATCGCCACGAAATCGCTGCCGTTCCCTCGTCCCCATCGTTTGCTCGGGATTGCTCCGCACCCACGGTTTTCATCGGCGGCGATTGCTTCGGCGGCTTGGAGACTCTCATTGCTCTCCATATTAGTGGCCATCTTGTTCCCAAACTCATCCAAGTTGGAGCTCTCCAGGTGCAGGTGGGACACGTGCAGTGTTGAAGATTGGTGCCTTGCACGTGCGAGTCAGAAGAAAAGTGATTGGTGGGGGGTAGTTTTGTAATTATAGGCAAATTCTCTCGTCACCACTCTAGAATGTGTGGGTATCTCATTGTAGCTTAAGCCTTAAAGATTCTCCTATTGCCCAAAAAGGGAGCTTTTACTTTTACTTCTTTCCTGTAATGACTAATAAAGTCTATAACTACCACCATGTTTATGTATGATTTAATAATTAAAATATAATATTTTGGATCA

Coding sequence (CDS)

ATGATCGGGTGCGTAAACAAGGGCGTATCGACCGAACTGCCTCCTTCGCCGACCTCTTCGTGTTCTTCGCTATCCATCGACGTGGAAGAGTCGTGTGAAACTCGGATCCGGCGGCTGATTACGGAGCATCCGGTCATCATATTCAGCCTCTCCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCACCATCGGCGTCCATCCCACCGTTATTGAGCTTGAAGATCGCCACGAAATCGCTGCCGTTCCCTCGTCCCCATCGTTTGCTCGGGATTGCTCCGCACCCACGGTTTTCATCGGCGGCGATTGCTTCGGCGGCTTGGAGACTCTCATTGCTCTCCATATTAGTGGCCATCTTGTTCCCAAACTCATCCAAGTTGGAGCTCTCCAGGTGCAGGTGGGACACGTGCAGTGTTGA

Protein sequence

MIGCVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQVGALQVQVGHVQC

Homology

[Close]

BLAST of Sed0001600 vs. NCBI nr
Match: XP_022997508.1 (glutaredoxin-C6-like [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 5.9e-49
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVPSS SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--AVGHVQC 136

[Close]

BLAST of Sed0001600 vs. NCBI nr
Match: XP_023546567.1 (glutaredoxin-C6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 5.9e-49
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVPSS SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--TVGHVQC 136

[Close]

BLAST of Sed0001600 vs. NCBI nr
Match: XP_022961714.1 (glutaredoxin-C6-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 7.7e-49
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVPSS SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPSS-SFIRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--TVGHVQC 136

[Close]

BLAST of Sed0001600 vs. NCBI nr
Match: KAG6598289.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029261.1 Glutaredoxin-C6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202.6 bits (514), Expect = 2.2e-48
Identity = 110/137 (80.29%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVP S SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPCS-SFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--TVGHVQC 136

[Close]

BLAST of Sed0001600 vs. NCBI nr
Match: XP_038885533.1 (glutaredoxin-C6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 107/137 (78.10%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+E PPSPTSS SSLSIDV+ES ETRIRRLI EHPVIIFS ++CSMCHVMKTLL
Sbjct: 4   CPNDVVSSEFPPSPTSS-SSLSIDVDESSETRIRRLIAEHPVIIFSRTSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL+D  EIAAVPSS SF RD SAP VFIGG  FGGLE+L+ALH+SGHL+P
Sbjct: 64  AIIGVHPTVIELDDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLESLVALHLSGHLIP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--PVGHVQC 136

[Close]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 9.5e-34
Identity = 81/126 (64.29%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 14  PPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVI 73
           PPS TSS +SLSID EES E +IRRLI+EHPVIIFS S+C MCHVMK LLATIGV PTVI
Sbjct: 21  PPSQTSS-TSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVI 80

Query: 74  ELEDRHEIAAVPSS--PSFARDCSA----PTVFIGGDCFGGLETLIALHISGHLVPKLIQ 133
           EL+D HE++++P++    ++   S     P VFIG +C GGLE+L+ALH+SG LVPKL+Q
Sbjct: 81  ELDD-HEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQ 140

[Close]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 14  PPSP-----TSSCSSLSIDVEESCETRIRRLITEHPVIIFS-LSACSMCHVMKTLLATIG 73
           PP+P     +++ +SLS D EE+ E++I RLI+EHPVIIF+  S+C MCHVMK LL+T+G
Sbjct: 31  PPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVG 90

Query: 74  VHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQ 132
           VHPTVIE++D  EIA +          +AP +FIGG C GG E+L+ALH+SG L+P+L++
Sbjct: 91  VHPTVIEIDD-GEIAYLAVE-------AAPVLFIGGTCVGGFESLVALHLSGQLIPRLVE 146

[Close]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-19
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 35  RIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIELEDRHEIAAVPSSPSFARDC 94
           RI RL+ E PV+IF+   C MCHVM+ LLA +G H TVIEL++  E AA     S A   
Sbjct: 44  RIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAA----SAAAAA 103

Query: 95  SAPTVFIGGDCFGGLETLIALHISGHLVPKLIQVGAL 132
           + P +F+GG   GGL+ L+ LH+SG LVP+L +VGAL
Sbjct: 104 AVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.6e-19
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 23  SLSID---VEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIELEDRH 82
           SL+ID    EE+   R+ RL+ E PV++F+   C M HVM+ LLA +G H TVIELE   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGG- 74

Query: 83  EIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQVGAL 132
             AA     +     + P +F+GGD  GGLE L+ LH+SG LVP+L +VGAL
Sbjct: 75  --AAEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 30  ESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIEL-------EDRHEIA 89
           ES   R+ RL +E  V++FS+S+C MCH +K L   +GVHPTV EL       E    +A
Sbjct: 23  ESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRGRELERALA 82

Query: 90  AVP--SSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQVGAL 132
            +     P+ A     P VFIGG   G ++ ++A HI+G LVP L + GAL
Sbjct: 83  RLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGAL 133

[Close]

BLAST of Sed0001600 vs. ExPASy TrEMBL
Match: A0A6J1KE42 (glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVPSS SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--AVGHVQC 136

[Close]

BLAST of Sed0001600 vs. ExPASy TrEMBL
Match: A0A6J1HEU7 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.7e-49
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 4   CVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLL 63
           C N  VS+ELPPSPTSS SSLSIDV+ES E RIRRLITEHPVIIFS S+CSMCHVMKTLL
Sbjct: 4   CANDVVSSELPPSPTSS-SSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKTLL 63

Query: 64  ATIGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVP 123
           A IGVHPTVIEL D  EIAAVPSS SF RD SAP VFIGG  FGGLETL+ALH+SGHLVP
Sbjct: 64  AIIGVHPTVIELNDHDEIAAVPSS-SFIRDSSAPAVFIGGASFGGLETLVALHLSGHLVP 123

Query: 124 KLIQVGALQVQVGHVQC 141
           KLI+VGAL   VGHVQC
Sbjct: 124 KLIEVGAL--TVGHVQC 136

[Close]

BLAST of Sed0001600 vs. ExPASy TrEMBL
Match: A0A1S3BAG0 (glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.2e-48
Identity = 108/135 (80.00%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 6   NKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLAT 65
           N  VS E PPSPTSS SSLSIDV+ES ETRIRRLITEHPVIIFS S+CSMCHVMKTLLA 
Sbjct: 6   NDAVSFEFPPSPTSS-SSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLAI 65

Query: 66  IGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKL 125
           IGVHPTVIE++D  EIAAVPSS SF RD SAP VFIGG  FGGLE+L+ALH+SGHLVPKL
Sbjct: 66  IGVHPTVIEVDDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKL 125

Query: 126 IQVGALQVQVGHVQC 141
           I+VGAL   VGHVQC
Sbjct: 126 IEVGAL--PVGHVQC 136

[Close]

BLAST of Sed0001600 vs. ExPASy TrEMBL
Match: A0A0A0LN11 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 107/135 (79.26%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 6   NKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLAT 65
           N  VS E PPSPTSS SSLSIDV+ES ETRIRRLIT+HPVIIFS S+CSMCHVMKTLLA 
Sbjct: 6   NDAVSFEFPPSPTSS-SSLSIDVDESSETRIRRLITDHPVIIFSRSSCSMCHVMKTLLAI 65

Query: 66  IGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKL 125
           IGVHPTVIE++D  EIAAVPSS SF RD SAP VFIGG  FGGLE+L+ALH+SGHLVPKL
Sbjct: 66  IGVHPTVIEVDDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKL 125

Query: 126 IQVGALQVQVGHVQC 141
           I+VGAL   VGHVQC
Sbjct: 126 IEVGAL--PVGHVQC 136

[Close]

BLAST of Sed0001600 vs. ExPASy TrEMBL
Match: A0A5A7UYF1 (Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001380 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 103/128 (80.47%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 6   NKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLAT 65
           N  VS E PPSPTSS SSLSIDV+ES ETRIRRLITEHPVIIFS S+CSMCHVMKTLLA 
Sbjct: 6   NDAVSFEFPPSPTSS-SSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLAI 65

Query: 66  IGVHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKL 125
           IGVHPTVIE++D  EIAAVPSS SF RD SAP VFIGG  FGGLE+L+ALH+SGHLVPKL
Sbjct: 66  IGVHPTVIEVDDHDEIAAVPSS-SFVRDSSAPAVFIGGASFGGLESLVALHLSGHLVPKL 125

Query: 126 IQVGALQV 134
           I+VGAL V
Sbjct: 126 IEVGALPV 131

[Close]

BLAST of Sed0001600 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 6.7e-35
Identity = 81/126 (64.29%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 14  PPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVI 73
           PPS TSS +SLSID EES E +IRRLI+EHPVIIFS S+C MCHVMK LLATIGV PTVI
Sbjct: 21  PPSQTSS-TSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVI 80

Query: 74  ELEDRHEIAAVPSS--PSFARDCSA----PTVFIGGDCFGGLETLIALHISGHLVPKLIQ 133
           EL+D HE++++P++    ++   S     P VFIG +C GGLE+L+ALH+SG LVPKL+Q
Sbjct: 81  ELDD-HEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQ 140

[Close]

BLAST of Sed0001600 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 7.2e-29
Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 14  PPSP-----TSSCSSLSIDVEESCETRIRRLITEHPVIIFS-LSACSMCHVMKTLLATIG 73
           PP+P     +++ +SLS D EE+ E++I RLI+EHPVIIF+  S+C MCHVMK LL+T+G
Sbjct: 31  PPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVG 90

Query: 74  VHPTVIELEDRHEIAAVPSSPSFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQ 132
           VHPTVIE++D  EIA +          +AP +FIGG C GG E+L+ALH+SG L+P+L++
Sbjct: 91  VHPTVIEIDD-GEIAYLAVE-------AAPVLFIGGTCVGGFESLVALHLSGQLIPRLVE 146

[Close]

BLAST of Sed0001600 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14
Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 1   MIGCVNKGVSTELPPSPTSSCSSLSIDVEESCETRIRRLITEHPVIIFSLSACSMCHVMK 60
           M G ++   +  +  +   S   LS+  + + E R+R ++ E+ VI+     C MCHV++
Sbjct: 1   MQGTISCARNYNMTTTVGESLRPLSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVVR 60

Query: 61  TLLATIGVHPTVIELEDRHEIAAVPSSPSF-----ARDCSAPTVFIGGDCFGGLETLIAL 120
            LL  +GV+P V+E+++  E   +    +            P V++GG  FGGL+ ++A 
Sbjct: 61  RLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMAT 120

Query: 121 HISGHLVPKLIQVGAL 132
           HISG LVP L +VGAL
Sbjct: 121 HISGELVPILKEVGAL 135

[Close]

BLAST of Sed0001600 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 36  IRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIELED-------RHEIAAVPSSP 95
           ++++I+E  V+IFS ++C M H +KTL   +GV+PT+ EL++        H +A +  SP
Sbjct: 4   LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSP 63

Query: 96  SFARDCSAPTVFIGGDCFGGLETLIALHISGHLVPKLIQVGAL 132
                 + P VFIGG   GG   +++LH++  LVP L + GAL
Sbjct: 64  ------TVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGAL 100

[Close]

BLAST of Sed0001600 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 36  IRRLITEHPVIIFSLSACSMCHVMKTLLATIGVHPTVIELEDRHEIAAVPSSPSFARDCS 95
           I +++ E PV+I+S S+C M H +KTLL   G +P V EL++      +  +      CS
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQA-LLRLGCS 63

Query: 96  --APTVFIGGDCFGGLETLIALHISGHLVPKLIQVGALQV 134
              P VFIGG+  GG   +++LH++G L+P L + GAL V
Sbjct: 64  PAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:

BLAST of Sed0001600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997508.1	5.9e-49	81.02	glutaredoxin-C6-like [Cucurbita maxima]	[more]
XP_023546567.1	5.9e-49	81.02	glutaredoxin-C6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961714.1	7.7e-49	81.02	glutaredoxin-C6-like [Cucurbita moschata]	[more]
KAG6598289.1	2.2e-48	80.29	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029261.1 G...	[more]
XP_038885533.1	1.4e-47	78.10	glutaredoxin-C6-like isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0001600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	9.5e-34	64.29	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	1.0e-27	54.03	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	3.0e-19	51.55	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	8.6e-19	47.32	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q6K609	2.2e-14	41.44	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]

BLAST of Sed0001600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KE42	2.8e-49	81.02	glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1	[more]
A0A6J1HEU7	3.7e-49	81.02	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1	[more]
A0A1S3BAG0	9.2e-48	80.00	glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=...	[more]
A0A0A0LN11	2.0e-47	79.26	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G351650 PE=3 SV=1	[more]
A0A5A7UYF1	1.5e-45	80.47	Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Sed0001600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	6.7e-35	64.29	Thioredoxin superfamily protein	[more]
AT5G11930.1	7.2e-29	54.03	Thioredoxin superfamily protein	[more]
AT1G28480.1	1.0e-14	33.09	Thioredoxin superfamily protein	[more]
AT4G15700.1	1.9e-13	37.86	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.5e-13	39.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 45..105 e-value: 1.0E-6 score: 28.8
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 36..132 e-value: 1.4E-30 score: 103.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 8..132
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 26..136 e-value: 3.4E-22 score: 80.2
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 8..132
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 33..132 score: 17.596874
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 34..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001600.1	Sed0001600.1	mRNA
Sed0001600.2	Sed0001600.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity