Sed0001575 (gene) Chayote v1

Overview
NameSed0001575
Typegene
OrganismSechium edule (Chayote v1)
Descriptionpre-mRNA-processing factor 17-like
LocationLG04: 4872124 .. 4877031 (+)
RNA-Seq ExpressionSed0001575
SyntenySed0001575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGAATCAGAGTGAATGATAGATATTTATGTGCAATTAGTGTCTATAAAATCGGCCCCGTTTATCAAATTTGAGTTGCAATTTTTTAACTCTGAAATCTTAATTTCGCATAATTTGTTTGGGATTTATTTCAATCCGGCTGCCTTGATTGGATCTCATCTCGCTACGCAAAACTAAAACCCTAGCCTCAGGTATTTGAATTTCTTCATGTTGAATCCTCGTTTCTTCATCTGATTCATCTTTCCTGCACCTGTTTCTCACTTCAAGTTTCAATCTTTCGATCTCTTCCGTAGCTACAGAATAGGGTTTTATTTGCTTGTGAAAAATTTTGGAGCTGTATGTATTAGGGTTTAAAGGAAGAGTACTCTAGATTTTTGTTGATTCAGTTCCAAGAAGATTCGGTTTTAGCTGTTGAAGCCGAAAGGGTTTGTCAATTCGGCTTCGAATCGGGGTTTTTTTTTTCTGTTGCCTCTGGAACTTATGGATCTTCTTCAGTCATATACAGATCAAAATGACGATGATGGTAGCCCTAAACCGCTTACGTCGTCGCCAGAAGCTTCTCCGCCTCGCCTCCTCCCCGCTAAAACCTCGGCGCCCAGGGTTGATGATACAATGTTGGCCCTCACGGTGGCGAACGCCAACCGGATAGCCTCGAAGCCGATTGACCCGACCCAACATCTCGTTGCGTTTAACCCCACCTACGACCAACTATGGGCGCCAATTTACGGCCCATCTCATCCATATGCCAAGGATGGCATTGCACAGGGAATGCGAAACCACAAGCTAGGATTCGTGGAGGATGCTTCCATTGAACCATTTGTATTTGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCGGCTTCTGCTGGGAACAATTATGTTGGGGACATGGAGGCTTTGCAGAAGAATGATGCGATCTCTGTGTATAACATTCCACAGCATGATCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAGAGGAGTGAGAATGAGGATGTGGAAATGGAATTGGAATTGGACCCGACTGAAGTTGATAATCCAGCGAGTGATGTGTGGTTGAGGAAGAATAGGAAGAGTCCGTGGTCTGGAAAGAAGGAAGGTATGCAAACCGAGCTAACTGAGGAGCAGAAGAAATATGCGGAGGAGTATGCAAAGAAGAAAGGTGAAGAAAAAGGTGGTGAAAAGGGAGAAGTTACTGCAGACAAGAGTACGTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGGTCTTGGATTGCACCCCCCAAGGATGCCAAGGCCACAAATGACCATTGTTATATTCCAAAAAGACTGGTGCATACATGGAGTGGGCACACAAAGGGTGTCTCAGCTATAAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGACGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCCCAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTAGCTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTTTCCACTGGGAAAATTCCTTACGTTGTTAAGCTTAATCCTGATGATGATAAACAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATTGTTCAGTGGGACATGAACTCAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTAACATCAAGTGATGACAAGTCGCTTCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCTTCCATTTCCGTACACCCCAACACGAATTGGCTGGCAGCACAAAGTTTAGACAATCAAATTCTTATCTATGGCACTAGAGAGAGATTTCAGCTAAATAAGAAAAAGAGGTTTGCTGGGCACATTGTAGCAGGGTATGCTTGCCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCGGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTAGAGCAAAGTAAAGTAGCAACATGTGGCTGGGATGGACTGATAAAATATTGGTTAGTAAATCTCTTTACCCTGGTGATATTTTAGGATAAGTCATTATAAATGTTTAATGGAGGCCATGCTATTCTTATACCCTTCAGTGTTACATATTATTTCCTTTCGTGATTCCTGCTGTATGAGCGTCTAATGTTTGTTTTATTTGTGTTTCTGCTGACCTTTGGTGTTTTCTTATAACCCTTTGTTAGAGATCTTCCTTTTGGCTTAACTCTTTAGGGTGTGTTTGGGCCCCTGTTTATGTAAACGGCCGAGTTGGTTATAATAACTCAACCGATGTTTGCCCCACCGTTTATTATAAACAGTGGTTACCTAAACCTGCGTGCCAGTTTATCTAAACCTACGTGTCTGTTTATCTACACCTTATATATATTACTTTTTGTTACATAACCAGTCTTTCAAACACCGTTTATCATAATCCCTGTTATAATAACTTGCCTCTCAAACACCATTTATAATAACCTACCGTTTATCATAACCTTCCGTCTATAATAACCAAACCGGTGCTCCAAACGCACCCTTAGTAGTTGAATGCAACTCTGGTTATCAATCATGCATGTTAAATTTTGTTCATTAGACTGGCACCTAAATAGCTGCCTCAAAGATTTCAGGTCATTACTGCTGTTTTTGTGAACCTTTAGCTGGTCGAAGGACTTGATAAGAGTTGCATTGAATGTGCTGATATAATGTTATTGTCTGCTAGTTGAATGCCTTGCTAATTATTCCTCACCTCCTGCTTTTGTCTCTGTGATTCTTGGATTTTGTTCATGCTGCTAAATTTTTAGATTCCTCGATGGTAAATTTTTTCTATTACTCACATTCTTGGACTTTTAACTTTTGGTATGTATCATTTTGGGTGATATTTTTTATATAATATTCGTGAGTATCCGGTCTAGCTTAAATGTACAACTAATCTCATAGTGTGACCGTCTAACTAATATTTGGTGGTAAAAAAAAACTATTAGTTTTTAGGTTGGTGGGCACCATGGAATTCATTCTCTCTTACTCTCTTACGGTGTGTTTGGATAGAGGATTTACGAGGGTTTGTTCAGGGATTGGCCCCACCCCACGTTTGGATGGAGCAACGCCAAAAAGCCCCTTAAAATCCTTCATAAAACCCTCATAAATCTCTGGGGTACTTAAGGTGATAAGTTCAATCTATGGTAGCCACCTACCTAAGAATTAATTTCCTACGGGTTTCCTTGACATCCAAATGTTGTAGGGTCAGGCGGTATGCCCCCTGACATTAGTCGAGGTGTGTGCAAGCTTGCCCGGATAGTCACGACTATAAAAAAAAAACCTTCATAAAACCCTTCATGAAACTCCCATAAATTCTTCTGAGGTACAAAATATCACTTCAACCACTCATATCAAATCAAACGAGGGTTTTCTTTGTTCTTTTTTCTGTTCTGTTTTTTTTTCTTTTTCCTATTGTACTTTTGTTCATTTCATCAATGTATACACTTGTTTCTTGTTTCAAAAAAAAAAAATCAAACGAGGGTTTTCTGCCACAACCACTTATCAAATCAAACGAGGGTTTTCTTTGGATTAGTGCAGTTAAAAGTCTTCTATATGAATTATGGTGGGAGAGAAATCAACGTATCTTTTAAGATTCTCGTCTCCCTTGGCAAGTTAGAAGTGATTCAGCTCGAACGAAGACTTCACTTTGGGCTTCTACCTCGAAGGCCTTTGAAAATTACTCTATCCAACAGATTTTCTCGAATTGGGATGCTTTTTCTTTAATCTGTCTCTCAAGTATTTTTGTATTCTGTTATCTTCCTTTTTCTGTTCTGCTTTTTTTCTTTCTTTTCTTTTGTTTCATTCATTTTGTACACTTTCTCTTCATTTTCTCAATGAAATGACTGGTTTCTTGTTTCAAAAAAAAAAAAATCAAATGAGGGTTTTCGACCACAACCACTCATAACTCATCAATCCAAGCAAGGCTTTATCTTCACCAAACCCCCCCTCATAACTACTCAAAACCCCTCAGCCATTTCCAAAATCCTCTTTCCAAACACATCCTTAGTTTTTAAGATACTTTTGATCACTAGGCCAACTCACTAGGATTTTTCTTAGGGTTTTCTAGTCTAAGTTAGAGTAATTATTAGTCATTAGTCATTCGGTTAAGTATGAATCATTCTGGATGGTTTTCATACTCAAGAGAAGAAAACCATATCCATTACTACTTTTCACCTACTTGTGATTGTAATGCATCAGCTTGTGTGCATTTTTTCACTCTGTATTGGTATTGCTTCTCATTATTATTTGGTGATGAGCATGCACCTTTACCATTTGATTGACACATAATTGAATGTAACTCAAGTAAAAGTTCATCCATTGGGATTAGCGGTGTAATGATTTTTGTTCTGCTCTTGCTGTTTCTTCATACAGAAGATTTATGTTTACATTTGTGGACTGCAGGGACTAGATTTGAGCTTGTTGATATGTCAGCGCCGTCATCGACTGTGCCTGGGTCGTTTGGCCTCAAGTAGAAGAAAAATCTGCCTTCTAAAAGAGATGAGAAATGTGTCTTAACTTGAATTGTGTTAGTAGATCAACTTAGTTTAGTATAATCCCAAGCTCATTGTACTGTTAGTTTCTTACATTTTTGTATACTGAGTTGATACAAGATTACTTCTTTCTTCTTTATGTTGCAGTCCATTTTATCTCACCTGTTCCCC

mRNA sequence

GTTAGAATCAGAGTGAATGATAGATATTTATGTGCAATTAGTGTCTATAAAATCGGCCCCGTTTATCAAATTTGAGTTGCAATTTTTTAACTCTGAAATCTTAATTTCGCATAATTTGTTTGGGATTTATTTCAATCCGGCTGCCTTGATTGGATCTCATCTCGCTACGCAAAACTAAAACCCTAGCCTCAGGTATTTGAATTTCTTCATGTTGAATCCTCGTTTCTTCATCTGATTCATCTTTCCTGCACCTGTTTCTCACTTCAAGTTTCAATCTTTCGATCTCTTCCGTAGCTACAGAATAGGGTTTTATTTGCTTGTGAAAAATTTTGGAGCTGTATGTATTAGGGTTTAAAGGAAGAGTACTCTAGATTTTTGTTGATTCAGTTCCAAGAAGATTCGGTTTTAGCTGTTGAAGCCGAAAGGGTTTGTCAATTCGGCTTCGAATCGGGGTTTTTTTTTTCTGTTGCCTCTGGAACTTATGGATCTTCTTCAGTCATATACAGATCAAAATGACGATGATGGTAGCCCTAAACCGCTTACGTCGTCGCCAGAAGCTTCTCCGCCTCGCCTCCTCCCCGCTAAAACCTCGGCGCCCAGGGTTGATGATACAATGTTGGCCCTCACGGTGGCGAACGCCAACCGGATAGCCTCGAAGCCGATTGACCCGACCCAACATCTCGTTGCGTTTAACCCCACCTACGACCAACTATGGGCGCCAATTTACGGCCCATCTCATCCATATGCCAAGGATGGCATTGCACAGGGAATGCGAAACCACAAGCTAGGATTCGTGGAGGATGCTTCCATTGAACCATTTGTATTTGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCGGCTTCTGCTGGGAACAATTATGTTGGGGACATGGAGGCTTTGCAGAAGAATGATGCGATCTCTGTGTATAACATTCCACAGCATGATCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAGAGGAGTGAGAATGAGGATGTGGAAATGGAATTGGAATTGGACCCGACTGAAGTTGATAATCCAGCGAGTGATGTGTGGTTGAGGAAGAATAGGAAGAGTCCGTGGTCTGGAAAGAAGGAAGGTATGCAAACCGAGCTAACTGAGGAGCAGAAGAAATATGCGGAGGAGTATGCAAAGAAGAAAGGTGAAGAAAAAGGTGGTGAAAAGGGAGAAGTTACTGCAGACAAGAGTACGTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGGTCTTGGATTGCACCCCCCAAGGATGCCAAGGCCACAAATGACCATTGTTATATTCCAAAAAGACTGGTGCATACATGGAGTGGGCACACAAAGGGTGTCTCAGCTATAAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGACGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCCCAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTAGCTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTTTCCACTGGGAAAATTCCTTACGTTGTTAAGCTTAATCCTGATGATGATAAACAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATTGTTCAGTGGGACATGAACTCAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTAACATCAAGTGATGACAAGTCGCTTCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCTTCCATTTCCGTACACCCCAACACGAATTGGCTGGCAGCACAAAGTTTAGACAATCAAATTCTTATCTATGGCACTAGAGAGAGATTTCAGCTAAATAAGAAAAAGAGGTTTGCTGGGCACATTGTAGCAGGGTATGCTTGCCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCGGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTAGAGCAAAGTAAAGTAGCAACATGTGGCTGGGATGGACTGATAAAATATTGGGACTAGATTTGAGCTTGTTGATATGTCAGCGCCGTCATCGACTGTGCCTGGGTCGTTTGGCCTCAAGTAGAAGAAAAATCTGCCTTCTAAAAGAGATGAGAAATGTGTCTTAACTTGAATTGTGTTAGTAGATCAACTTAGTTTAGTATAATCCCAAGCTCATTGTACTGTTAGTTTCTTACATTTTTGTATACTGAGTTGATACAAGATTACTTCTTTCTTCTTTATGTTGCAGTCCATTTTATCTCACCTGTTCCCC

Coding sequence (CDS)

ATGGATCTTCTTCAGTCATATACAGATCAAAATGACGATGATGGTAGCCCTAAACCGCTTACGTCGTCGCCAGAAGCTTCTCCGCCTCGCCTCCTCCCCGCTAAAACCTCGGCGCCCAGGGTTGATGATACAATGTTGGCCCTCACGGTGGCGAACGCCAACCGGATAGCCTCGAAGCCGATTGACCCGACCCAACATCTCGTTGCGTTTAACCCCACCTACGACCAACTATGGGCGCCAATTTACGGCCCATCTCATCCATATGCCAAGGATGGCATTGCACAGGGAATGCGAAACCACAAGCTAGGATTCGTGGAGGATGCTTCCATTGAACCATTTGTATTTGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCGGCTTCTGCTGGGAACAATTATGTTGGGGACATGGAGGCTTTGCAGAAGAATGATGCGATCTCTGTGTATAACATTCCACAGCATGATCAGAAGAAGCGGAAGATTGAGAAAAAGAAAGAGAGGAGTGAGAATGAGGATGTGGAAATGGAATTGGAATTGGACCCGACTGAAGTTGATAATCCAGCGAGTGATGTGTGGTTGAGGAAGAATAGGAAGAGTCCGTGGTCTGGAAAGAAGGAAGGTATGCAAACCGAGCTAACTGAGGAGCAGAAGAAATATGCGGAGGAGTATGCAAAGAAGAAAGGTGAAGAAAAAGGTGGTGAAAAGGGAGAAGTTACTGCAGACAAGAGTACGTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGGTCTTGGATTGCACCCCCCAAGGATGCCAAGGCCACAAATGACCATTGTTATATTCCAAAAAGACTGGTGCATACATGGAGTGGGCACACAAAGGGTGTCTCAGCTATAAGGTTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGACGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCCCAGGCGGTTCGGGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTAGCTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTTTCCACTGGGAAAATTCCTTACGTTGTTAAGCTTAATCCTGATGATGATAAACAAAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATTGTTCAGTGGGACATGAACTCAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTAACATCAAGTGATGACAAGTCGCTTCGTGTTTGGGAATTTGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCACATGCATTCCATGCCTTCCATTTCCGTACACCCCAACACGAATTGGCTGGCAGCACAAAGTTTAGACAATCAAATTCTTATCTATGGCACTAGAGAGAGATTTCAGCTAAATAAGAAAAAGAGGTTTGCTGGGCACATTGTAGCAGGGTATGCTTGCCAGGTCAATTTTTCACCAGATGGACGTTTTGTTATGTCGGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCATGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTAGAGCAAAGTAAAGTAGCAACATGTGGCTGGGATGGACTGATAAAATATTGGGACTAG

Protein sequence

MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVEMELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Homology
[Close]
BLAST of Sed0001575 vs. NCBI nr
Match: XP_023541872.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6573743.1 Pre-mRNA-processing factor 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 562/583 (96.40%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANANR  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNN++GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           M  EL+P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 M--ELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. NCBI nr
Match: XP_008446211.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 pre-mRNA splicing factor [Cucumis melo subsp. melo])

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRL+P+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. NCBI nr
Match: XP_022966828.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANANR  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNN++GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           M  +L+P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 M--DLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. NCBI nr
Match: XP_011655627.1 (pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.1 hypothetical protein Csa_009274 [Cucumis sativus])

HSP 1 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 560/583 (96.05%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEAL+KNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. NCBI nr
Match: XP_023541873.1 (pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 561/582 (96.39%), Postives = 571/582 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANANR  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNN++GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           M  EL+P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 M--ELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 583
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match: O60508 (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 2.0e-154
Identity = 283/573 (49.39%), Postives = 372/573 (64.92%), Query Frame = 0 

Query: 20  LTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  A  SAP V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVEMELELDPTEVDNPASD 199
             Y+G +E  +KN  ++V+   Q     +K EK+K+  EN+   ++  L P         
Sbjct: 160 AKYIGSVEEAEKNQGLTVFETGQ-----KKTEKRKKFKENDASNIDGFLGP--------- 219

Query: 200 VWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEE 259
            W +   +   +   E  Q EL E   K      +KKG+++  + GE   +K+  H KE 
Sbjct: 220 -WAKYVDEKDVAKPSEEEQKELDEITAK-----RQKKGKQEEEKPGE---EKTILHVKEM 279

Query: 260 RDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILS 319
            DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+LS
Sbjct: 280 YDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLS 339

Query: 320 AGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKIKYWDTETGQV 379
             MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A+YD+ +K WDTETGQ 
Sbjct: 340 CSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC 399

Query: 380 ISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITF 439
           IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ SG+I QEYD+HLGAVNTI F
Sbjct: 400 ISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVF 459

Query: 440 VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQIL 499
           VD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQIL
Sbjct: 460 VDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQIL 519

Query: 500 IYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTL 559
           I+G + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++   
Sbjct: 520 IFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRF 579

Query: 560 KCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 580 KAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match: Q9DC48 (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.0e-153
Identity = 287/591 (48.56%), Postives = 382/591 (64.64%), Query Frame = 0 

Query: 11  NDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVA--NANRIASKP-------I 70
           +D +GS  PL ++        L   T +P      L+LTVA  +A  +A K        +
Sbjct: 22  SDSEGSRCPLPAADS------LMHLTKSP---SAKLSLTVAVDSAPEVAVKEDLETGVHL 81

Query: 71  DPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNT 130
           DP    V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  T
Sbjct: 82  DPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRT 141

Query: 131 FHKYGYAADPSA---SAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENED 190
           F  YGYA DPS         Y+G +E  +KN  ++V+   Q     +K EK+K+  EN+ 
Sbjct: 142 FATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQ-----KKTEKRKKFKENDA 201

Query: 191 VEMELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKG 250
             ++  L P          W +   +   +   E  Q EL E   K      +KKG+++ 
Sbjct: 202 SNIDGFLGP----------WAKYVDEKDVAKPSEEEQKELDEITAK-----RQKKGKQEE 261

Query: 251 GEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHT 310
            + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WSGHT
Sbjct: 262 EKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHT 321

Query: 311 KGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFL 370
           KGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL
Sbjct: 322 KGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFL 381

Query: 371 TASYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSG 430
           +A+YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ SG
Sbjct: 382 SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 441

Query: 431 QITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 490
           +I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP+++
Sbjct: 442 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVT 501

Query: 491 VHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 550
           + PN  WLA QS+DNQILI+G + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG
Sbjct: 502 LSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDG 561

Query: 551 EGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
            GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 562 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match: O43071 (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.1e-102
Identity = 223/596 (37.42%), Postives = 316/596 (53.02%), Query Frame = 0 

Query: 14  DGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKPIDPTQHLVAFNPT 73
           D   +  + SP   P  LL  +  AP V D +        + I SK  +  +  +A N  
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVDNV------KDDLIVSKGGNSRE--LARNVP 68

Query: 74  YDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA 133
            +++  P  GP++P+        ++N   G+ E   +  FVF+++        Y A+  A
Sbjct: 69  VNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYANTHA 128

Query: 134 SAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVEMELELDPTEVDNP 193
             G     D EA    D             KRK +K KER E+         DP+ ++  
Sbjct: 129 IYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG-------DPSILEGD 188

Query: 194 ASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGEKGEV--------- 253
            +        K PW+G     Q+    E  +Y E  +     EK  E   +         
Sbjct: 189 GA-------YKGPWAG-YGSEQSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQ 248

Query: 254 --TADKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHTW 313
             T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + TW
Sbjct: 249 LATPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTW 308

Query: 314 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 373
            GHTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG
Sbjct: 309 KGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDG 368

Query: 374 SKFLTASYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 433
             FL+ S+DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D
Sbjct: 369 RSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFD 428

Query: 434 MNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 493
           + S  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSM
Sbjct: 429 IRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSM 488

Query: 494 PSISVHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 553
           P +++ PN   +A QSLDN I +Y   E+++ NKKK F G+  +GY+ +V FSPDGRFV 
Sbjct: 489 PRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVF 548

Query: 554 SGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 584
           SGD  G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYWD
Sbjct: 549 SGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558

[Close]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-73
Identity = 140/399 (35.09%), Postives = 227/399 (56.89%), Query Frame = 0 

Query: 200 RKNRK--SPWS--GKKEGMQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKE 259
           RK RK   PW      +   ++ +E QK+  + +     E+    +     + S F+GK 
Sbjct: 60  RKTRKGDGPWGSWSSSDDETSQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHFYGKS 119

Query: 260 ERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLIL 319
           E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK GHLIL
Sbjct: 120 EKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTGHLIL 179

Query: 320 SAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKIKYWDTETGQ 379
           S G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++S+D+ +K WDTETG+
Sbjct: 180 SGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDTETGK 239

Query: 380 VISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD----MNSGQITQEYDQHLGAV 439
           V +       P  V+  P +  +   + G+S+ KI+ +D     N G + Q YD HL ++
Sbjct: 240 VKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQG-LVQTYDHHLSSI 299

Query: 440 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSL 499
             + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  AQS+
Sbjct: 300 LALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCAQSM 359

Query: 500 DNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCK 559
           DN+I  +  + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW T +
Sbjct: 360 DNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWNTSR 419

Query: 560 VFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKYWD 584
           +   +K      I   +WHP E SKV   G  G I   D
Sbjct: 420 LLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455

[Close]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.4e-43
Identity = 92/313 (29.39%), Postives = 163/313 (52.08%), Query Frame = 0 

Query: 280 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 339
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 340 AVRDISFCNDGSKFLTASYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 399
           AVR   +   G + L+  +D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 400 AGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 459
            G    +I  WDM +G++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 460 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGH 519
           +F     I        ++ PS+++HP      AQ+  N + ++ +   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 520 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 579
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 580 VATCGWDGLIKYW 583
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match: E5GBJ7 (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRL+P+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match: A0A1S3BFC4 (pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRL+P+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match: A0A6J1HTD1 (pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466417 PE=4 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 561/583 (96.23%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANANR  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNN++GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SE+EDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           M  +L+P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 M--DLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match: A0A0A0KQ97 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 560/583 (96.05%), Postives = 572/583 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRLLP+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEAL+KNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match: A0A5D3CVQ9 (Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00990 PE=4 SV=1)

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 560/582 (96.22%), Postives = 571/582 (98.11%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDLLQSYTDQNDDDGSPK LTSSPEASPPRL+P+KTSAP+VDDTMLALTVANAN+  SKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHKYGYAADPSASAGNNY+GDMEALQKNDAISVYNIPQH+QKKRKIEKKKE SENED  
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED-- 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGEEKGGE 240
           ME E++P EVDNPASDVWL KNRKSPWSGKKEG+QTELTEEQKKYAEEYAKKKGEEKGGE
Sbjct: 181 MEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGE 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDKKI 360
           FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA YDKKI
Sbjct: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480

Query: 481 AAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 583
           WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Sed0001575 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 988.0 bits (2553), Expect = 3.2e-288
Identity = 475/585 (81.20%), Postives = 521/585 (89.06%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKPLTSSPEASPPRLLPAKTSAPRVDDTMLALTVANANRIASKP 60
           MDL+QSY ++++       + SSPE+SPPR+L AK+SAP VDDT LALTVAN N+  SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP++GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNYVGDMEALQKNDAISVYNIPQHDQKKRKIEKKKERSENEDVE 180
           TFHK GYAADPS   G NYVGD+EA +KND +SV+NIPQ +QK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 MELELDPTEVDNPASDVWLRKNRKSPWSGKKEGMQTELTEEQKKYAEEYAKKKGE--EKG 240
            E+E    E +NP ++ WLRKNRKSPWS KKE +Q ELTEEQKKYAE++AKKK E  ++G
Sbjct: 181 EEIE---PEAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQG 240

Query: 241 GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAI 300
             KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAI
Sbjct: 241 ETKGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAI 300

Query: 301 RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTASYDK 360
           RFFPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTA YDK
Sbjct: 301 RFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDK 360

Query: 361 KIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEY 420
            IKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+N+G++TQEY
Sbjct: 361 NIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEY 420

Query: 421 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTN 480
           DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN N
Sbjct: 421 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGN 480

Query: 481 WLAAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 540
           WLAAQSLDNQILIY TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF
Sbjct: 481 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 540

Query: 541 WDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 584
           WDWK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573

[Close]
BLAST of Sed0001575 vs. TAIR 10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-52
Identity = 100/312 (32.05%), Postives = 168/312 (53.85%), Query Frame = 0 

Query: 280 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 339
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 340 VRDISFCNDGSKFLTASYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 399
           V+D+ +   G   L+  YD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 400 MSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 459
            S   +  WD+ + +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 460 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGHIV 519
              V +        ++ P I  HP      AQS  N   I+ T   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 520 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 579
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

Query: 580 TCGWDGLIKYWD 584
            C W+G +  ++
Sbjct: 448 ACSWNGQVSVFE 457

[Close]
BLAST of Sed0001575 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-28
Identity = 73/302 (24.17%), Postives = 141/302 (46.69%), Query Frame = 0 

Query: 287 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFN----SGKCMRTYMGHSQAVRDI 346
           T + H + VS+++ F   G L+ SA  D  ++ + +        + ++ + GH   + D+
Sbjct: 19  TLTSHNRAVSSVK-FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 78

Query: 347 SFCNDGSKFLTASYDKKIKYWDTETGQVIST-FSTGKIPYVVKLNPDDDKQNILLAGMSD 406
           +F +D    ++AS DK +K WD ETG +I T        + V  NP   + N++++G  D
Sbjct: 79  AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP---QSNMIVSGSFD 138

Query: 407 KKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 466
           + +  WD+ +G+  +    H   V  + F  +    V+SS D   R+W+ G    +K + 
Sbjct: 139 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 198

Query: 467 EPHMHSMPSISVHPNTNWLAAQSLDNQILIYGTRERFQLNKKKRFAGHIVAGYACQVNFS 526
           +     +  +   PN  ++   +LDN + ++       L   K + GH+ A Y     FS
Sbjct: 199 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGHVNAQYCISSAFS 258

Query: 527 -PDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 583
             +G+ ++SG  +     W+  + K+ + L+ H    +    HP E + +A+   D  ++
Sbjct: 259 VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASGSLDKTVR 312

[Close]
BLAST of Sed0001575 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-26
Identity = 75/291 (25.77%), Postives = 128/291 (43.99%), Query Frame = 0 

Query: 289 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 348
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 349 SKFLTASYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 408
           S+ ++AS DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 409 MNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 468
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 469 PSISVHPNTNWLAAQSLDNQILIYGTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 528
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 529 FVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 577
            V +G  +     WD  + +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

[Close]
BLAST of Sed0001575 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-25
Identity = 83/309 (26.86%), Postives = 141/309 (45.63%), Query Frame = 0 

Query: 280 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAV 339
           +P +  H   GH   V A R F   G+  L+ G D  +++W+  + G  ++TY  H + V
Sbjct: 6   LPTKEAHILKGHEGAVLAAR-FNGDGNYALTCGKDRTIRLWNP-HRGILIKTYKSHGREV 65

Query: 340 RDISFCNDGSKFLTASYDKKIKYWDTETGQVISTF--STGKIPYVVKLNPDDDKQNILLA 399
           RD+   +D +KF +   D+++ YWD  TG+VI  F    G++   VK N   D  +++++
Sbjct: 66  RDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV-NAVKFN---DSSSVVVS 125

Query: 400 GMSDKKIVQWDMNSGQI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
              D+ +  WD  S  +   Q  D  L  V ++  V      +  S D ++R ++  I  
Sbjct: 126 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV--VLTKTEIIGGSVDGTVRTFDMRIG- 185

Query: 460 VIKYISEPHMHSMPSISVHPNTNWLAAQSLDN--QILIYGTRERFQLNKKKRFAGHIVAG 519
             + +S+     +  IS+  + N + A  LD+  ++L   T E  Q+ K     GHI   
Sbjct: 186 --REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK-----GHISKS 245

Query: 520 YACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 579
           +      +     V+ G  +G  +FWD    KV    + H+ V     +HP E   + T 
Sbjct: 246 FKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC-MLTS 297

Query: 580 GWDGLIKYW 583
             DG I+ W
Sbjct: 306 SVDGTIRVW 297

The following BLAST results are available for this feature:
BLAST of Sed0001575 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541872.10.0e+0096.40pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6... [more]
XP_008446211.10.0e+0096.23PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 p... [more]
XP_022966828.10.0e+0096.23pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima][more]
XP_011655627.10.0e+0096.05pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.1 hypotheti... [more]
XP_023541873.10.0e+0096.39pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of Sed0001575 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O605082.0e-15449.39Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1[more]
Q9DC481.0e-15348.56Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1[more]
O430713.1e-10237.42Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P409683.9e-7335.09Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
E9Q3499.4e-4329.39WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1[more]
BLAST of Sed0001575 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GBJ70.0e+0096.23Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3BFC40.0e+0096.23pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
A0A6J1HTD10.0e+0096.23pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A0A0KQ970.0e+0096.05WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G... [more]
A0A5D3CVQ90.0e+0096.22Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Sed0001575 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G10580.13.2e-28881.20Transducin/WD40 repeat-like superfamily protein [more]
AT5G54520.13.0e-5232.05Transducin/WD40 repeat-like superfamily protein [more]
AT3G49660.11.3e-2824.17Transducin/WD40 repeat-like superfamily protein [more]
AT2G43770.12.8e-2625.77Transducin/WD40 repeat-like superfamily protein [more]
AT5G64730.11.1e-2526.86Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..259
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 332..369
score: 11.708317
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 550..583
score: 8.623787
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 288..322
score: 10.706503
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 418..450
score: 10.495596
NoneNo IPR availableCDDcd00200WD40coord: 284..583
e-value: 3.51211E-69
score: 223.366
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 351..365
score: 33.59
coord: 308..322
score: 33.9
coord: 437..451
score: 29.36
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 281..321
e-value: 6.9E-9
score: 45.5
coord: 325..364
e-value: 2.6E-10
score: 50.3
coord: 411..450
e-value: 4.1E-6
score: 36.3
coord: 499..540
e-value: 0.14
score: 21.2
coord: 367..408
e-value: 3.6
score: 13.5
coord: 543..583
e-value: 3.5E-6
score: 36.6
coord: 454..493
e-value: 30.0
score: 7.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 412..449
e-value: 0.0013
score: 19.5
coord: 505..540
e-value: 0.029
score: 15.2
coord: 283..321
e-value: 4.7E-6
score: 27.2
coord: 326..364
e-value: 3.5E-6
score: 27.6
coord: 546..583
e-value: 0.092
score: 13.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 288..322
score: 12.881143
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 418..450
score: 12.613797
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 332..373
score: 15.588017
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 550..583
score: 8.570195
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 268..583
e-value: 4.3E-96
score: 323.7
IPR032847Pre-mRNA-processing factor 17PANTHERPTHR43979PRE-MRNA-PROCESSING FACTOR 17coord: 50..583
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 308..322
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 279..583

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001575.1Sed0001575.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding