Sed0001547 (gene) Chayote v1

Overview


Name	Sed0001547
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Expansin
Location	LG07: 40621356 .. 40624452 (-)
RNA-Seq Expression	Sed0001547
Synteny	Sed0001547

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCTCTCCTCCCTTTCTCCCTCTCTCTCTCTCCTCTGTTTCCCTCCATAAATACCAACTCACCATTCTTCCAAATCTCCACATTCAAATTCTTCCACTTCTCTCAGCCCTTTGCCATGGCCGCCATTTCCATTCCTCTTCTCCTCTTTCTCCTCTCGCCCCTCGCCGCCGTCCACGCCAGGATCCCCGGAGTTTTCACCGCCGGCCAGTGGGAGACCGCTCATGCTACCTTTTACGGCGGCAGTGACGCCTCCGGAACCATGGGTACGCTCTTTGTTCTTGCCTTTTTTAGCCTTCATTTACCGCATTGTGTGCTCCATTCCAAGGAAATCTTCCGTTCTCGTTCGTTTTGTTCTCTTTTTTTTCTCTGTTGATTTTCCTCTGAGAAATGTTGCTGGTTCTGATTCTGTGTTTGATCGTCGTTTTAATTGATTCGGAGATCATTTCCTGCGTTTGATTCGAATTTTGTGTTTGAAATCTAGATGTGATTTTTGGATTTCTCGAGAGAGAATTGTGCGTGTTCGACTCTAATGTTGCTGTAGTGTGTGTTCTTTTTCGATCGGAGTTTCTCTGAGAAACCTTCTTGTGATTTGTGGATGATCATCATTTGAATTTATTGAGAGAGAATTGTTTGTGTTTGACTGGAATGTTGCTGTAGTGTGTGAATTTTTCAATCGGACGTTCTCTGAGAAACCTAGATCTAATTTGTGGATGATCAATGAATTTATCGAGAGAGAATCGTCCGCGTTTGATTCGAATGTTGATGTAGTGTGAAGTTTTTTGAATCGGAGCATCTCTGTGATTTGTGGATGATCATATGAATGAATCGAGAGAAAATTGAGTGTGTTAAGCTCAAATGCTGTTGTTGTGTACGCTTTTTTCTTCAATCGGACTTTCTCTGAGAATCCTAGTTGTGAAGGATCATATGAATCGATTGATTGATTCCGTTTGAAAAACCTAGTTATGAACGATTGTTTGAATTGATTTGCGAGAGAATTGTGCATTTGCTTGATTCAGGAGGTGCTTGCGGTTACGGAAACTTGTACAGCCAAGGCTATGGAGTAAACACGGCGGCGTTGAGCACTGCTCTGTTCAACAACGGCTTAAGCTGCGGAGCTTGCTTCGAGCTCAAGTGCGCAAACGATCCGCAGTGGTGCCATTCCGGCAGCCCGTCCATCTTGATCACTGCCACAAACTTTTGCCCTCCGAACTTCGCCCAACCGAGCGACAATGGAGGCTGGTGCAACCCTCCCCGGCCGCATTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCTGAGTACAGAGCCGGAATTGTTCCAGTCTCCTATCGCAGGTAAATTCAAAAACTCACTTTACTTTTCTCAGTAACCAACAGCATCGTTTAATTATAGTAGATGGCGTGTGAGAAATCAAGATGTGTATCTGATTTCCACTGTTCTGTTTTTGGTACTTTATACTGAAATTGGAAAACCGGGTACATGATTTTACTTTATCCATGGAATCTAGACTTGGTTGTTACTTTCTGTTTCGTGAGTTCATTTTCTCCATACTTCTTCATGAAAGTCGTTTATGGCCCCACAATCAGCCCGAATCTTTGTGCCATTGATCTGAAACGAGTTCGGGTTTTGACCCATCCCTATTAACTTTTATTTTACCCATTTTGTCTTCAGATCAACCCCATTCCCTTCAGTTTTTACCATATTGATAAAAGTTGTTCCTTTCTGTCCATTTTCAATTCTGAAGCTATTTTCTTAACTTTGTAAGCGATTTACTTTTCAATTGTGACCATGTGAATTGTTATGCCTTGTTCGATAACCATTTTGTTTTTGAAATTTAAATCTACGCTAACTATCTTACAATAATTTTTTTCTTATTTGGATATCTACATCTTACCTATATTTTAAAAAACAAAACCAAAATTTAGAATAAAAACAAATACTTCCAAAAACTTATTTTTGTTTTGAAAATTTGGTTAGTATTCACCTACTTTCTTAAATGGGGCCTAAGATGCTAGAGCCATACATATTATTGTTTAATTTTTTCATTTGGTGAAATACTTAGAAATCTGAAATGGGCTCACTCACATCTGACTTTGAGATCAACCTACATTTATAGGATGATGAATTAGTTATTCTATTTTATATTCATTAAACACAAATGGATGTTGGGATACAATCTAGGTTGATATTAGTCCAAAATGACACAATTTGTAGAAATATATTGAGGATAGATAAGATGCTCCACCAATGACCATATCATTTTAGAATCCAAACAAATTCTTAGAGAAATGACAAAATTGTTTTATGTTGATGAACTCCACAGGGTGCCATGCCGGAAACAGGGAGGAATCAGGTTCACAATCAACGGGTTCCGATACTTCAACTTGGTGCTGATCACGAACGTGGCAGGCGCGGGAGACATAGTGAAGGCGAGCGTGAAGGGCAGCAAAACAGAGTGGATGAGCATGAGCCGGAACTGGGGTCAGAACTGGCAATCAAACGCCATCTTGGTTGGTCAGTCGCTGTCGTTCAGGGTCACAGCCAGTGATCGCCGCACCACCACTTCCTGGAACATCGCCCCCTCCAGTTGGCAATTCGGCCAGACTTTCACAGGCAAGAATTTCAGAGTCTAAAAAAAAGGCTTTCCAAACCTTCCCGCCATTTTTTTAATCTTTAAACTTATGGGGGGAAAGGGTTTTCTTAGAAGGGAGAGAAAGTGGGAGAAAAATGGGGTAAAAGTGACCTAATGGTAATGGGGACTTTTTGACTTGGAAAATGGGTGTTATTATGGGAGGAAAAAAAATGGCAAAAAAGGGTTTTGGTTTGAAAGAATGAGGGTGTTTTCTTCTTTTTTGTTTACTTTGTTGTAATGAGAAGTGGCTGAAAGTGGCCGCTAGTTAGTATAGCCCACAGCCTACCTTATTATTATTATTATAAATCTGTATGTTTTATAGACTTATATTATAGTGCCACAGGTTTCCTTTTTTGTTACAAAATATAGAGGTTTAACACCTCGACCATCAGATCTCAGGGAAATTTCTTGAAATTTCAACTTTGATATGGGTCTTTGGAGACATTAATTTAGTCTGGTA

mRNA sequence

CTTTCTCTCTCCTCCCTTTCTCCCTCTCTCTCTCTCCTCTGTTTCCCTCCATAAATACCAACTCACCATTCTTCCAAATCTCCACATTCAAATTCTTCCACTTCTCTCAGCCCTTTGCCATGGCCGCCATTTCCATTCCTCTTCTCCTCTTTCTCCTCTCGCCCCTCGCCGCCGTCCACGCCAGGATCCCCGGAGTTTTCACCGCCGGCCAGTGGGAGACCGCTCATGCTACCTTTTACGGCGGCAGTGACGCCTCCGGAACCATGGGAGGTGCTTGCGGTTACGGAAACTTGTACAGCCAAGGCTATGGAGTAAACACGGCGGCGTTGAGCACTGCTCTGTTCAACAACGGCTTAAGCTGCGGAGCTTGCTTCGAGCTCAAGTGCGCAAACGATCCGCAGTGGTGCCATTCCGGCAGCCCGTCCATCTTGATCACTGCCACAAACTTTTGCCCTCCGAACTTCGCCCAACCGAGCGACAATGGAGGCTGGTGCAACCCTCCCCGGCCGCATTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCTGAGTACAGAGCCGGAATTGTTCCAGTCTCCTATCGCAGGGTGCCATGCCGGAAACAGGGAGGAATCAGGTTCACAATCAACGGGTTCCGATACTTCAACTTGGTGCTGATCACGAACGTGGCAGGCGCGGGAGACATAGTGAAGGCGAGCGTGAAGGGCAGCAAAACAGAGTGGATGAGCATGAGCCGGAACTGGGGTCAGAACTGGCAATCAAACGCCATCTTGGTTGGTCAGTCGCTGTCGTTCAGGGTCACAGCCAGTGATCGCCGCACCACCACTTCCTGGAACATCGCCCCCTCCAGTTGGCAATTCGGCCAGACTTTCACAGGCAAGAATTTCAGAGTCTAAAAAAAAGGCTTTCCAAACCTTCCCGCCATTTTTTTAATCTTTAAACTTATGGGGGGAAAGGGTTTTCTTAGAAGGGAGAGAAAGTGGGAGAAAAATGGGGTAAAAGTGACCTAATGGTAATGGGGACTTTTTGACTTGGAAAATGGGTGTTATTATGGGAGGAAAAAAAATGGCAAAAAAGGGTTTTGGTTTGAAAGAATGAGGGTGTTTTCTTCTTTTTTGTTTACTTTGTTGTAATGAGAAGTGGCTGAAAGTGGCCGCTAGTTAGTATAGCCCACAGCCTACCTTATTATTATTATTATAAATCTGTATGTTTTATAGACTTATATTATAGTGCCACAGGTTTCCTTTTTTGTTACAAAATATAGAGGTTTAACACCTCGACCATCAGATCTCAGGGAAATTTCTTGAAATTTCAACTTTGATATGGGTCTTTGGAGACATTAATTTAGTCTGGTA

Coding sequence (CDS)

ATGGCCGCCATTTCCATTCCTCTTCTCCTCTTTCTCCTCTCGCCCCTCGCCGCCGTCCACGCCAGGATCCCCGGAGTTTTCACCGCCGGCCAGTGGGAGACCGCTCATGCTACCTTTTACGGCGGCAGTGACGCCTCCGGAACCATGGGAGGTGCTTGCGGTTACGGAAACTTGTACAGCCAAGGCTATGGAGTAAACACGGCGGCGTTGAGCACTGCTCTGTTCAACAACGGCTTAAGCTGCGGAGCTTGCTTCGAGCTCAAGTGCGCAAACGATCCGCAGTGGTGCCATTCCGGCAGCCCGTCCATCTTGATCACTGCCACAAACTTTTGCCCTCCGAACTTCGCCCAACCGAGCGACAATGGAGGCTGGTGCAACCCTCCCCGGCCGCATTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCTGAGTACAGAGCCGGAATTGTTCCAGTCTCCTATCGCAGGGTGCCATGCCGGAAACAGGGAGGAATCAGGTTCACAATCAACGGGTTCCGATACTTCAACTTGGTGCTGATCACGAACGTGGCAGGCGCGGGAGACATAGTGAAGGCGAGCGTGAAGGGCAGCAAAACAGAGTGGATGAGCATGAGCCGGAACTGGGGTCAGAACTGGCAATCAAACGCCATCTTGGTTGGTCAGTCGCTGTCGTTCAGGGTCACAGCCAGTGATCGCCGCACCACCACTTCCTGGAACATCGCCCCCTCCAGTTGGCAATTCGGCCAGACTTTCACAGGCAAGAATTTCAGAGTCTAA

Protein sequence

MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQFGQTFTGKNFRV

Homology

[Close]

BLAST of Sed0001547 vs. NCBI nr
Match: XP_038889527.1 (expansin-A4 [Benincasa hispida])

HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136
Identity = 237/258 (91.86%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAA+ + LL  LLS L AV ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAALPLTLLPILLS-LFAVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL+LI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLILI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRT+TSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTSTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. NCBI nr
Match: XP_004147685.1 (expansin-A4 [Cucumis sativus] >KGN50556.1 hypothetical protein Csa_021445 [Cucumis sativus])

HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136
Identity = 235/256 (91.80%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 3   AISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 62
           A+S+ LL  LLS L  VHARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 5   ALSLTLLPILLS-LLTVHARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQG 64

Query: 63  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 122
           YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSI ITATNFCPPN+A PSDNG
Sbjct: 65  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSDNG 124

Query: 123 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 182
           GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL+LITN
Sbjct: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLILITN 184

Query: 183 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 242
           VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVT+SDRRT+TSWNI P
Sbjct: 185 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTSSDRRTSTSWNIVP 244

Query: 243 SSWQFGQTFTGKNFRV 259
           S+WQFGQTFTGKNFRV
Sbjct: 245 SNWQFGQTFTGKNFRV 259

[Close]

BLAST of Sed0001547 vs. NCBI nr
Match: KAG7030717.1 (Expansin-A4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494.2 bits (1271), Expect = 6.8e-136
Identity = 235/258 (91.09%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAAI I LL  ++S L +V ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAAIPISLLAIIIS-LLSVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCH+GSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHAGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNA+LVGQSLSFRVT+SDRRTTTSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTSSDRRTTTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. NCBI nr
Match: KAG6600046.1 (Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 234/258 (90.70%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAA+ I LL  ++S L +V ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAALPISLLAIIIS-LLSVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCH+GSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHAGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNA+LVGQSLSFRVT+SDRRTTTSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTSSDRRTTTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. NCBI nr
Match: XP_022984155.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135
Identity = 234/258 (90.70%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAAI I LL  ++S L +V ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAAIPISLLAIIIS-LLSVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCG+CFELKCANDPQWCH+GSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCANDPQWCHAGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNA+LVGQSLSFRVT+SDRRTTTSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTSSDRRTTTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 462.6 bits (1189), Expect = 2.9e-129
Identity = 214/251 (85.26%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 8   LLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT 67
           +L  L + LA   ARIPGV+  G WETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT
Sbjct: 7   VLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT 66

Query: 68  AALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGWCNP 127
           AALSTALFNNG SCGACFELKCA+DP+WCHSGSPSI ITATNFCPPNFAQPSDNGGWCNP
Sbjct: 67  AALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNP 126

Query: 128 PRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAG 187
           PRPHFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNLVL+TNVAGAG
Sbjct: 127 PRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG 186

Query: 188 DIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQF 247
           +IV+  VKG+ T WM+MSRNWGQNWQSN++LVGQSLSFRVT+SDRR++TSWNIAP++W+F
Sbjct: 187 NIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKF 246

Query: 248 GQTFTGKNFRV 259
           GQTF GKNFRV
Sbjct: 247 GQTFMGKNFRV 257

[Close]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 3.8e-129
Identity = 214/256 (83.59%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 3   AISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 62
           AI + +L       +   ARIPG+++ G W+ AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 63  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 122
           YG NTAALSTALFNNG+SCGACFELKCANDPQWCHSGSPSILITATNFCPPN AQPSDNG
Sbjct: 62  YGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNG 121

Query: 123 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 182
           GWCNPPR HFDLAMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVLITN
Sbjct: 122 GWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITN 181

Query: 183 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 242
           VAGAGDIV+ASVKGS+T WMS+SRNWGQNWQSNA+LVGQ+LSFRVT SDRRT+TSWN+ P
Sbjct: 182 VAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVP 241

Query: 243 SSWQFGQTFTGKNFRV 259
           S+WQFGQTF GKNFRV
Sbjct: 242 SNWQFGQTFVGKNFRV 257

[Close]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 5.6e-125
Identity = 203/243 (83.54%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 16  LAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF 75
           L A +A+IPGV++ G W+ AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF
Sbjct: 20  LTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF 79

Query: 76  NNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGWCNPPRPHFDLA 135
           NNG SCGACFE+KC +DP+WC  G+PSIL+TATNFCPPNFAQPSD+GGWCNPPR HFDLA
Sbjct: 80  NNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLA 139

Query: 136 MPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVKASVK 195
           MPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVL+TNVAGAGDI   SVK
Sbjct: 140 MPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVK 199

Query: 196 GSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQFGQTFTGKN 255
           GSKT+W+ MSRNWGQNWQSNA+L+GQSLSFRVTASDRR++TSWN+AP++WQFGQTF+GKN
Sbjct: 200 GSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKN 259

Query: 256 FRV 259
           FRV
Sbjct: 260 FRV 262

[Close]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.1e-124
Identity = 206/256 (80.47%), Postives = 228/256 (89.06%), Query Frame = 0


Query: 7   PLLLFLLSP----LAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 66
           PL+L  + P    L+   A IP VF+ G W+TAHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 5   PLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQG 64

Query: 67  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 126
           YG NTAALST+LFN+G SCGACFE+KC NDP+WCH G+PS+ +TATNFCPPN AQPSDNG
Sbjct: 65  YGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNG 124

Query: 127 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 186
           GWCNPPR HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVLITN
Sbjct: 125 GWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITN 184

Query: 187 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 246
           VAGAGDI + SVKGSKT WMS++RNWGQNWQSNA+LVGQSLSFRVT+SDRRT+TSWNIAP
Sbjct: 185 VAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAP 244

Query: 247 SSWQFGQTFTGKNFRV 259
           S+WQFGQTF GKNFRV
Sbjct: 245 SNWQFGQTFVGKNFRV 260

[Close]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.9e-123
Identity = 205/248 (82.66%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 13  LSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALST 72
           +SP A    RIPG +  G+W++AHATFYGGSDASGTMGGACGYGNLYSQGYGVN AALST
Sbjct: 20  VSPAA---GRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALST 79

Query: 73  ALFNNGLSCGACFELKCANDP--QWCHSGSPSILITATNFCPPNFAQPSDNGGWCNPPRP 132
           ALFN+G SCGACFE+KC N P  +WCH GSPSILITATNFCPPN+A PSDNGGWCNPPRP
Sbjct: 80  ALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRP 139

Query: 133 HFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIV 192
           HFDLAMPMFL IAEYRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVLITNVAGAGDIV
Sbjct: 140 HFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIV 199

Query: 193 KASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQFGQT 252
           +ASVKG+ T WM MSRNWGQNWQSN++LVGQ+LSFRVT SDRRT+TSWN AP+ W FGQT
Sbjct: 200 RASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQT 259

Query: 253 FTGKNFRV 259
           F GKNFRV
Sbjct: 260 FEGKNFRV 264

[Close]

BLAST of Sed0001547 vs. ExPASy TrEMBL
Match: A0A0A0KS81 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G182120 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.9e-136
Identity = 235/256 (91.80%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 3   AISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 62
           A+S+ LL  LLS L  VHARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 5   ALSLTLLPILLS-LLTVHARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQG 64

Query: 63  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 122
           YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSI ITATNFCPPN+A PSDNG
Sbjct: 65  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSDNG 124

Query: 123 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 182
           GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNL+LITN
Sbjct: 125 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLILITN 184

Query: 183 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 242
           VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVT+SDRRT+TSWNI P
Sbjct: 185 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTSSDRRTSTSWNIVP 244

Query: 243 SSWQFGQTFTGKNFRV 259
           S+WQFGQTFTGKNFRV
Sbjct: 245 SNWQFGQTFTGKNFRV 259

[Close]

BLAST of Sed0001547 vs. ExPASy TrEMBL
Match: A0A6J1J7W8 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111482566 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 7.4e-136
Identity = 234/258 (90.70%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAAI I LL  ++S L +V ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAAIPISLLAIIIS-LLSVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCG+CFELKCANDPQWCH+GSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCANDPQWCHAGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNA+LVGQSLSFRVT+SDRRTTTSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTSSDRRTTTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. ExPASy TrEMBL
Match: A0A6J1FRM9 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111447550 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.6e-136
Identity = 234/258 (90.70%), Postives = 247/258 (95.74%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAAI I LL  ++S L +V ARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYS
Sbjct: 1   MAAIPISLLAIIIS-LLSVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCH+GSPSI ITATNFCPPN+A PSD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHAGSPSIFITATNFCPPNYALPSD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVS+RRVPCRKQGGIRFTINGFRYFNLVLI
Sbjct: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKQGGIRFTINGFRYFNLVLI 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNA+LVGQSLSFRVT+SDRRTTTSWNI
Sbjct: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTSSDRRTTTSWNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
            PS+WQFGQTFTGKNFRV
Sbjct: 241 VPSNWQFGQTFTGKNFRV 257

[Close]

BLAST of Sed0001547 vs. ExPASy TrEMBL
Match: A0A5A7U3A7 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00320 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135
Identity = 232/254 (91.34%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 6   IPL-LLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYG 65
           +PL LL +L  L  VHARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYSQGYG
Sbjct: 7   LPLTLLPILLSLLTVHARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 66

Query: 66  VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGW 125
           VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSI ITATNFCPPN+A PSDNGGW
Sbjct: 67  VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSDNGGW 126

Query: 126 CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVA 185
           CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRK+GGIRFTINGFRYFNL+LITNVA
Sbjct: 127 CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLILITNVA 186

Query: 186 GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSS 245
           GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVT+SDRRT+TSWNI PS+
Sbjct: 187 GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTSSDRRTSTSWNIVPSN 246

Query: 246 WQFGQTFTGKNFRV 259
           WQFGQTFTGKNFRV
Sbjct: 247 WQFGQTFTGKNFRV 260

[Close]

BLAST of Sed0001547 vs. ExPASy TrEMBL
Match: A0A1S3CGK6 (Expansin OS=Cucumis melo OX=3656 GN=LOC103500224 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135
Identity = 232/254 (91.34%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 6   IPL-LLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYG 65
           +PL LL +L  L  VHARIPGV++ GQW++AHATFYGGSDASGTMGGACGYGNLYSQGYG
Sbjct: 7   LPLTLLPILLSLLTVHARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 66

Query: 66  VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGW 125
           VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSI ITATNFCPPN+A PSDNGGW
Sbjct: 67  VNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSDNGGW 126

Query: 126 CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVA 185
           CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRK+GGIRFTINGFRYFNL+LITNVA
Sbjct: 127 CNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLILITNVA 186

Query: 186 GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSS 245
           GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVT+SDRRT+TSWNI PS+
Sbjct: 187 GAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTSSDRRTSTSWNIVPSN 246

Query: 246 WQFGQTFTGKNFRV 259
           WQFGQTFTGKNFRV
Sbjct: 247 WQFGQTFTGKNFRV 260

[Close]

BLAST of Sed0001547 vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-130
Identity = 214/251 (85.26%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 8   LLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT 67
           +L  L + LA   ARIPGV+  G WETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT
Sbjct: 7   VLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT 66

Query: 68  AALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGWCNP 127
           AALSTALFNNG SCGACFELKCA+DP+WCHSGSPSI ITATNFCPPNFAQPSDNGGWCNP
Sbjct: 67  AALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNP 126

Query: 128 PRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAG 187
           PRPHFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNLVL+TNVAGAG
Sbjct: 127 PRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG 186

Query: 188 DIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQF 247
           +IV+  VKG+ T WM+MSRNWGQNWQSN++LVGQSLSFRVT+SDRR++TSWNIAP++W+F
Sbjct: 187 NIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKF 246

Query: 248 GQTFTGKNFRV 259
           GQTF GKNFRV
Sbjct: 247 GQTFMGKNFRV 257

[Close]

BLAST of Sed0001547 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-130
Identity = 214/256 (83.59%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 3   AISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 62
           AI + +L       +   ARIPG+++ G W+ AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 63  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 122
           YG NTAALSTALFNNG+SCGACFELKCANDPQWCHSGSPSILITATNFCPPN AQPSDNG
Sbjct: 62  YGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNG 121

Query: 123 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 182
           GWCNPPR HFDLAMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVLITN
Sbjct: 122 GWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITN 181

Query: 183 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 242
           VAGAGDIV+ASVKGS+T WMS+SRNWGQNWQSNA+LVGQ+LSFRVT SDRRT+TSWN+ P
Sbjct: 182 VAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVP 241

Query: 243 SSWQFGQTFTGKNFRV 259
           S+WQFGQTF GKNFRV
Sbjct: 242 SNWQFGQTFVGKNFRV 257

[Close]

BLAST of Sed0001547 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 448.4 bits (1152), Expect = 4.0e-126
Identity = 203/243 (83.54%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 16  LAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF 75
           L A +A+IPGV++ G W+ AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF
Sbjct: 20  LTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALF 79

Query: 76  NNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNGGWCNPPRPHFDLA 135
           NNG SCGACFE+KC +DP+WC  G+PSIL+TATNFCPPNFAQPSD+GGWCNPPR HFDLA
Sbjct: 80  NNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLA 139

Query: 136 MPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVKASVK 195
           MPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVL+TNVAGAGDI   SVK
Sbjct: 140 MPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVK 199

Query: 196 GSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAPSSWQFGQTFTGKN 255
           GSKT+W+ MSRNWGQNWQSNA+L+GQSLSFRVTASDRR++TSWN+AP++WQFGQTF+GKN
Sbjct: 200 GSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKN 259

Query: 256 FRV 259
           FRV
Sbjct: 260 FRV 262

[Close]

BLAST of Sed0001547 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-125
Identity = 206/256 (80.47%), Postives = 228/256 (89.06%), Query Frame = 0


Query: 7   PLLLFLLSP----LAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYSQG 66
           PL+L  + P    L+   A IP VF+ G W+TAHATFYGG+DASGTMGGACGYGNLYSQG
Sbjct: 5   PLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQG 64

Query: 67  YGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSDNG 126
           YG NTAALST+LFN+G SCGACFE+KC NDP+WCH G+PS+ +TATNFCPPN AQPSDNG
Sbjct: 65  YGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNG 124

Query: 127 GWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITN 186
           GWCNPPR HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVLITN
Sbjct: 125 GWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITN 184

Query: 187 VAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNIAP 246
           VAGAGDI + SVKGSKT WMS++RNWGQNWQSNA+LVGQSLSFRVT+SDRRT+TSWNIAP
Sbjct: 185 VAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAP 244

Query: 247 SSWQFGQTFTGKNFRV 259
           S+WQFGQTF GKNFRV
Sbjct: 245 SNWQFGQTFVGKNFRV 260

[Close]

BLAST of Sed0001547 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-120
Identity = 200/258 (77.52%), Postives = 226/258 (87.60%), Query Frame = 0


Query: 1   MAAISIPLLLFLLSPLAAVHARIPGVFTAGQWETAHATFYGGSDASGTMGGACGYGNLYS 60
           MAA  I  +  ++      +A+IPGV+T G W  AHATFYG +DASGTMGGACGYGNLYS
Sbjct: 1   MAAKVITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYS 60

Query: 61  QGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSILITATNFCPPNFAQPSD 120
           QGYGVNTAALSTALFNNGLSCG+CFELKC NDP WC  G+PSILITATNFCPPNF Q SD
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASD 120

Query: 121 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLI 180
           NGGWCNPPR HFDLAMPMFL IA+Y+AGIVPVSYRR+PCRK+GGIRFTINGF+YFNLVL+
Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLV 180

Query: 181 TNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTTTSWNI 240
           TNVAGAGD++K SVKGS T+W+ +SRNWGQNWQSNA+LVGQSLSFRV  SD R++TS NI
Sbjct: 181 TNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNI 240

Query: 241 APSSWQFGQTFTGKNFRV 259
           APS+WQFGQT++GKNFRV
Sbjct: 241 APSNWQFGQTYSGKNFRV 258

The following BLAST results are available for this feature:

BLAST of Sed0001547 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889527.1	4.0e-136	91.86	expansin-A4 [Benincasa hispida]	[more]
XP_004147685.1	4.0e-136	91.80	expansin-A4 [Cucumis sativus] >KGN50556.1 hypothetical protein Csa_021445 [Cucum...	[more]
KAG7030717.1	6.8e-136	91.09	Expansin-A4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600046.1	1.2e-135	90.70	Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022984155.1	1.5e-135	90.70	expansin-A4-like [Cucurbita maxima]	[more]

BLAST of Sed0001547 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38865	2.9e-129	85.26	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
O48818	3.8e-129	83.59	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
O80932	5.6e-125	83.54	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]
Q9M2S9	2.1e-124	80.47	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
Q852A1	6.9e-123	82.66	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]

BLAST of Sed0001547 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS81	1.9e-136	91.80	Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G182120 PE=3 SV=1	[more]
A0A6J1J7W8	7.4e-136	90.70	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111482566 PE=3 SV=1	[more]
A0A6J1FRM9	9.6e-136	90.70	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111447550 PE=3 SV=1	[more]
A0A5A7U3A7	3.7e-135	91.34	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00320 PE=3 ...	[more]
A0A1S3CGK6	3.7e-135	91.34	Expansin OS=Cucumis melo OX=3656 GN=LOC103500224 PE=3 SV=1	[more]

BLAST of Sed0001547 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28950.1	2.1e-130	85.26	expansin A6	[more]
AT2G39700.1	2.7e-130	83.59	expansin A4	[more]
AT2G37640.1	4.0e-126	83.54	Barwin-like endoglucanases superfamily protein	[more]
AT3G55500.1	1.5e-125	80.47	expansin A16	[more]
AT5G02260.1	1.5e-120	77.52	expansin A9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 163..175 score: 84.1 coord: 103..113 score: 83.64 coord: 62..76 score: 90.0 coord: 122..139 score: 81.3 coord: 89..100 score: 53.33 coord: 175..196 score: 70.0 coord: 239..255 score: 63.53 coord: 210..231 score: 75.76 coord: 139..152 score: 78.33
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 71..89 score: 72.76 coord: 201..215 score: 71.5 coord: 49..67 score: 76.97 coord: 239..253 score: 55.0 coord: 31..46 score: 66.41 coord: 147..163 score: 68.53
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 67..154 e-value: 2.2E-58 score: 210.0
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 50..164 score: 30.937366
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 165..242 e-value: 3.8E-26 score: 90.9
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 174..253 score: 21.353682
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 19..160 e-value: 2.7E-47 score: 162.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 31..182
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 164..256 e-value: 9.0E-23 score: 82.0
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 161..253
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 67..154 e-value: 3.8E-21 score: 75.2
None	No IPR available	PANTHER	PTHR31867:SF166	EXPANSIN-A4	coord: 11..257
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 11..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001547.1	Sed0001547.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane