Sed0001543 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTAAAAGGGCCCATCTCATTGTGCAGTTCCTTCGTCTTATTCTGCAATGTCCTCTTCCTCGCTCGACCCTTCGATCGCCGACACGGCCGCACAGTTCCAGAGTTCGTCTAATTTTCTTTTTTTCTTCTAAATTTGTTGTTTTGCATATCTGATTTTGAACCCTAATTCAATTTATTATATACGTTTCTTTTTTCAAACATATTCGTATTTATAATTAGGTTGAATCATGGATCTAATCGGATCCTAATTGTCTTTTGTAGAGTAGTTTGTAAGCATGTTTCCATCTTCTAATTCGACCAATTTTATGGCTTAATTTGGCTGTTTACCCAATTTTATGGTTTAATTATATTTGGATCCTTCAATAATCAGACCCCATGTATGAGACTGTGTTATCCCTTTTGTTTTGCTTCTTAGACACAATTTGCTTTTCCATGCTCGAATAGATATAAATATATGAGATTTACTTTGAATTAGTTTTTTAAACTTTGGCCCTGTTGGCTATGCCTTTTGGTTTTATTAATTTGCTCACTCTAAAACTGAGATTAATTGTCCAAATCTATTACTATTTATAATATAGTATGTGTATGTATGTTTGTTTTTCCATATACTTTTTTCTAATCTTTCTGTTTGTTTTCAACTACAGATTTAAGTGTCTCTAATTCTGAACGAAAAATCTGTAATCCTTATCATGAAGATCGTCCTGATGGTGATTTGACTGATGAAGAGTACAATCAATACTTTGAAGCTGTAGCAAATAGTGAGGTGGGGTTGTTAATTTCAACATTTAATTTGGTTTATTTGTTAATTATTAACATGTAGAGTTACATTGTTTAAATTATGTAGGGTTTTGATGTTCCATACTTTCCTTATGCTCTTGTACCCGCTCTAATTGTACCTGTATCGAATTGGGAAAGCTACACGAATGAGCTTGATCGTAATGGAAGCTTAGCCATTCAACACTACAATGAGCAAAATGTATGCAACATCTTTTCCTTCATTGTTCATCTTTTTTGTTATTTGCTTTCATTTTTCTCAATTGGTTTCCATTAATCTGTGCTTAGGGAACCGACTTTGAAATTGTAGACTTTGTAAAGCTGAATGTTGAGGCTGTGCAAGGTTTGAATTATTATATGACATTCAAGGCAAAGCCGAGAGGGTCTCGAACCGACGACCTTTCCACCGCAACCTTTCAAGCTCTAGTCTATGATGGAATTGATGAAACAGAGGTTTGCATTTGCAGGAAATTGGTGGCATCCCCTGATGCATCAAAAAACTGTTAATTTACTTCTATTATATGAACATTATGTTGCAGTTGAACTTGTTTCTGTCTATTATATGAACATTTTGAAACTTTTCAAGGCTTAGGGCTTATTTATTTATTAATAACCTAAATTATGAA ATTATTAAAAGGGCCCATCTCATTGTGCAGTTCCTTCGTCTTATTCTGCAATGTCCTCTTCCTCGCTCGACCCTTCGATCGCCGACACGGCCGCACAGTTCCAGAATTTAAGTGTCTCTAATTCTGAACGAAAAATCTGTAATCCTTATCATGAAGATCGTCCTGATGGTGATTTGACTGATGAAGAGTACAATCAATACTTTGAAGCTGTAGCAAATAGTGAGGGTTTTGATGTTCCATACTTTCCTTATGCTCTTGTACCCGCTCTAATTGTACCTGTATCGAATTGGGAAAGCTACACGAATGAGCTTGATCGTAATGGAAGCTTAGCCATTCAACACTACAATGAGCAAAATGGAACCGACTTTGAAATTGTAGACTTTGTAAAGCTGAATGTTGAGGCTGTGCAAGGTTTGAATTATTATATGACATTCAAGGCAAAGCCGAGAGGGTCTCGAACCGACGACCTTTCCACCGCAACCTTTCAAGCTCTAGTCTATGATGGAATTGATGAAACAGAGGTTTGCATTTGCAGGAAATTGGTGGCATCCCCTGATGCATCAAAAAACTGTTAATTTACTTCTATTATATGAACATTATGTTGCAGTTGAACTTGTTTCTGTCTATTATATGAACATTTTGAAACTTTTCAAGGCTTAGGGCTTATTTATTTATTAATAACCTAAATTATGAA ATGTCCTCTTCCTCGCTCGACCCTTCGATCGCCGACACGGCCGCACAGTTCCAGAATTTAAGTGTCTCTAATTCTGAACGAAAAATCTGTAATCCTTATCATGAAGATCGTCCTGATGGTGATTTGACTGATGAAGAGTACAATCAATACTTTGAAGCTGTAGCAAATAGTGAGGGTTTTGATGTTCCATACTTTCCTTATGCTCTTGTACCCGCTCTAATTGTACCTGTATCGAATTGGGAAAGCTACACGAATGAGCTTGATCGTAATGGAAGCTTAGCCATTCAACACTACAATGAGCAAAATGGAACCGACTTTGAAATTGTAGACTTTGTAAAGCTGAATGTTGAGGCTGTGCAAGGTTTGAATTATTATATGACATTCAAGGCAAAGCCGAGAGGGTCTCGAACCGACGACCTTTCCACCGCAACCTTTCAAGCTCTAGTCTATGATGGAATTGATGAAACAGAGGTTTGCATTTGCAGGAAATTGGTGGCATCCCCTGATGCATCAAAAAACTGTTAA MSSSSLDPSIADTAAQFQNLSVSNSERKICNPYHEDRPDGDLTDEEYNQYFEAVANSEGFDVPYFPYALVPALIVPVSNWESYTNELDRNGSLAIQHYNEQNGTDFEIVDFVKLNVEAVQGLNYYMTFKAKPRGSRTDDLSTATFQALVYDGIDETEVCICRKLVASPDASKNC Homology
BLAST of Sed0001543 vs. NCBI nr
Match: XP_028091213.1 (uncharacterized protein LOC114291567 [Camellia sinensis]) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-17 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Sed0001543 vs. NCBI nr
Match: THG04121.1 (hypothetical protein TEA_024172 [Camellia sinensis var. sinensis]) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-17 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Sed0001543 vs. NCBI nr
Match: XP_028053036.1 (uncharacterized protein LOC114257478 [Camellia sinensis]) HSP 1 Score: 98.2 bits (243), Expect = 7.4e-17 Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of Sed0001543 vs. NCBI nr
Match: THG21948.1 (hypothetical protein TEA_004640 [Camellia sinensis var. sinensis]) HSP 1 Score: 98.2 bits (243), Expect = 7.4e-17 Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of Sed0001543 vs. NCBI nr
Match: XP_023525925.1 (uncharacterized protein LOC111789396 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-15 Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy Swiss-Prot
Match: Q9SV54 (UPF0725 protein At4g28920 OS=Arabidopsis thaliana OX=3702 GN=At4g28920 PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.3e-04 Identity = 37/123 (30.08%), Postives = 58/123 (47.15%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy TrEMBL
Match: A0A4S4DMB7 (Cystatin domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_024172 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 2.7e-17 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy TrEMBL
Match: A0A4S4EY14 (Cystatin domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004640 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 3.6e-17 Identity = 58/156 (37.18%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy TrEMBL
Match: A0A4S4E3W0 (Cystatin domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_009608 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15 Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy TrEMBL
Match: A0A6J1IJT3 (uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 7.4e-15 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of Sed0001543 vs. ExPASy TrEMBL
Match: A0A6J1IL21 (uncharacterized protein LOC111475178 OS=Cucurbita maxima OX=3661 GN=LOC111475178 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of Sed0001543 vs. TAIR 10
Match: AT4G28920.1 (Protein of unknown function (DUF626) ) HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05 Identity = 37/123 (30.08%), Postives = 58/123 (47.15%), Query Frame = 0
BLAST of Sed0001543 vs. TAIR 10
Match: AT1G50690.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 7.6e-04 Identity = 34/116 (29.31%), Postives = 55/116 (47.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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