Sed0001541 (gene) Chayote v1

Overview


Name	Sed0001541
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH118-like
Location	LG01: 68525184 .. 68526870 (-)
RNA-Seq Expression	Sed0001541
Synteny	Sed0001541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCAATATTGATTCCCCATTTTCATTTGATTTGGGAGAAGATTTGTTTTCTCTTCCATCTCTTCCTCCTTCCATTGATATCTCTCCCATCTTGGATACAAATAACATTAACACTTTCTCTAAAAAGCCCCAAAACAAAGGTCGCCGGAAAAACCCACCCGCGGCGGAGGCGGGCTCTTCCAATGGTATAACTGGTGATATTGAGATCCCCAATGACCACAAAAAGAAGAAGATTATTCACAGAAATGTGGAGCGCCAAAGAAGGCATGAAATGTCCTCTCTTTACTCCGATCTCCGATCACTTATCCCTAAAGAATATCTTAAGGTAACACTAATTCATGCTTTTAATTAATATTCTTAAGATAGGCCTTTAAAATTAAATTATCAATGGACTTCAGGTCAATGTGAACATAGTTCATTTGTAATTGACATGTATCATTACTTGAAGCTGGAAATTTAAATACCCTAATCTTCTAATATATTGTTTGTACTAATTCGAAAACATAAAGTTCCCAAACTCATAATCAATCTGTAATGAGGTTCAAGATCTCTCACCTTTCTTACGTTAAATCTTCAACATGGTATCTCTTTAGACTCCTTATTCTTCCACCAAATTCTAGTACTTTAAATTGGACTGAACTAATCATAATTTGACTTTAATGATATATAGTTCCGACTCAAATTAATTCTCTTACATACACTATTTTTTTTTTTATCAATTAATTGCGATTTGGAACAATGGGTTATTTAATATAGGTATCATAACACTTAAAAATGAAATTAAAATCCAATTTAAGATTGGTAAATTTAAAGAAAGACAAATTTGAGAGATAAATTGAATAACTCACATTAAAAGGACGAATATATACTTCGAAATATTTACAAATTAGAATAGTTACAACTTACCACCTTTTCTTAACCATTTGAGTTTTTGTTTTTTATTTTTAAATTTAAATTTGTGTAGTTACTCAAATTTTCTATATATAATTTTATCTTCTTTAAAAGAAAAAAAGGTGAATTCTAACCAAATTCCATAATCGAAAAGTATTTGCAAACTAATTTTTTAACTTTTAGATTTTGGTTTAGTTCTAAAATAACGTGAGTAAAATATAGATATTAAAGTATTGAAAACTATAAATTAGAGGTGTAGGTGTTATATGTTTAGATTTCAAAAAAAAAAAAAAATAATAATAATAAAATAAATAAATAAAATCAAATGGTTATCAAATAGCTGGTCTAAATTCTATTGGTCATTTGGGTTTTGATAGGGAAAACGATCAATATGCGACCAAATGGGAGAAGCAGTTAAGTACATTCAACAAATGGAGAACAAAATTCAACAACTGTCTATTCAAAGAGACGAGCTCAAAAAGCTGTCCTATAAAAATGTGGGTGCAACCAGTGCAGTCCAAACGCTGAATTCTTCGAAAAGTGACTCGGTGGTGGTTAGGGCAAAAACTGGACCAGGGGTCCAAGTTATTGTAGACACTAGCACCCAAAACATGAACCTTATCTCCAACATTCTTCGAGTTTTAACCGTCGATGGACTCGAAATCCTCAGCTGCATTTCGACGAACATTAACAAGAGGTTCGTCTGCACCATCGACTGCCAAGTTGTTGTTCATGATGGAACTATCGATGTCTCTGAGCTTAAGAATAAGTTGATGAATTTAGAATATTAA

mRNA sequence

ATGGAGCTCAATATTGATTCCCCATTTTCATTTGATTTGGGAGAAGATTTGTTTTCTCTTCCATCTCTTCCTCCTTCCATTGATATCTCTCCCATCTTGGATACAAATAACATTAACACTTTCTCTAAAAAGCCCCAAAACAAAGGTCGCCGGAAAAACCCACCCGCGGCGGAGGCGGGCTCTTCCAATGGTATAACTGGTGATATTGAGATCCCCAATGACCACAAAAAGAAGAAGATTATTCACAGAAATGTGGAGCGCCAAAGAAGGCATGAAATGTCCTCTCTTTACTCCGATCTCCGATCACTTATCCCTAAAGAATATCTTAAGGGAAAACGATCAATATGCGACCAAATGGGAGAAGCAGTTAAGTACATTCAACAAATGGAGAACAAAATTCAACAACTGTCTATTCAAAGAGACGAGCTCAAAAAGCTGTCCTATAAAAATGTGGGTGCAACCAGTGCAGTCCAAACGCTGAATTCTTCGAAAAGTGACTCGGTGGTGGTTAGGGCAAAAACTGGACCAGGGGTCCAAGTTATTGTAGACACTAGCACCCAAAACATGAACCTTATCTCCAACATTCTTCGAGTTTTAACCGTCGATGGACTCGAAATCCTCAGCTGCATTTCGACGAACATTAACAAGAGGTTCGTCTGCACCATCGACTGCCAAGTTGTTGTTCATGATGGAACTATCGATGTCTCTGAGCTTAAGAATAAGTTGATGAATTTAGAATATTAA

Coding sequence (CDS)

ATGGAGCTCAATATTGATTCCCCATTTTCATTTGATTTGGGAGAAGATTTGTTTTCTCTTCCATCTCTTCCTCCTTCCATTGATATCTCTCCCATCTTGGATACAAATAACATTAACACTTTCTCTAAAAAGCCCCAAAACAAAGGTCGCCGGAAAAACCCACCCGCGGCGGAGGCGGGCTCTTCCAATGGTATAACTGGTGATATTGAGATCCCCAATGACCACAAAAAGAAGAAGATTATTCACAGAAATGTGGAGCGCCAAAGAAGGCATGAAATGTCCTCTCTTTACTCCGATCTCCGATCACTTATCCCTAAAGAATATCTTAAGGGAAAACGATCAATATGCGACCAAATGGGAGAAGCAGTTAAGTACATTCAACAAATGGAGAACAAAATTCAACAACTGTCTATTCAAAGAGACGAGCTCAAAAAGCTGTCCTATAAAAATGTGGGTGCAACCAGTGCAGTCCAAACGCTGAATTCTTCGAAAAGTGACTCGGTGGTGGTTAGGGCAAAAACTGGACCAGGGGTCCAAGTTATTGTAGACACTAGCACCCAAAACATGAACCTTATCTCCAACATTCTTCGAGTTTTAACCGTCGATGGACTCGAAATCCTCAGCTGCATTTCGACGAACATTAACAAGAGGTTCGTCTGCACCATCGACTGCCAAGTTGTTGTTCATGATGGAACTATCGATGTCTCTGAGCTTAAGAATAAGTTGATGAATTTAGAATATTAA

Protein sequence

MELNIDSPFSFDLGEDLFSLPSLPPSIDISPILDTNNINTFSKKPQNKGRRKNPPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAKTGPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDGTIDVSELKNKLMNLEY

Homology

[Close]

BLAST of Sed0001541 vs. NCBI nr
Match: XP_022922335.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 239.6 bits (610), Expect = 2.9e-59
Identity = 145/259 (55.98%), Postives = 183/259 (70.66%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSLPPSID---------ISPILDTNNINTFSKKPQNKGRR 60
           ME NI+SP SFDLG++LF LPS+   ID         ISP+    N  + SK+P+   RR
Sbjct: 1   MEFNIESPISFDLGDELFPLPSISSCIDNISVPQFPSISPL---ENDKSASKRPKRSSRR 60

Query: 61  KNPPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKG 120
             PP A          + E PND K+KKI+HR+VERQRR EMSSLYS LRSL+P EYLKG
Sbjct: 61  NPPPNA---------SNDENPNDQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKG 120

Query: 121 KRSICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVR 180
           K SI D M E VKYIQ M+ +I+QLS +RDELK LS +N+ A   V+TLNSS+ DSVVVR
Sbjct: 121 KPSISDHMHETVKYIQYMQRRIRQLSDKRDELKNLSGENM-AVGMVETLNSSRRDSVVVR 180

Query: 181 AKTGPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDG 240
           +K G G+QV++DT+TQ+   +SNILRVL V+GLEILSCI+  +N+R++ TI+CQ V  DG
Sbjct: 181 SKNGLGIQVVLDTTTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ-VESDG 240

Query: 241 ---TIDVSELKNKLMNLEY 248
              +IDV EL++KL NLEY
Sbjct: 241 FYPSIDVCELQHKLTNLEY 245

[Close]

BLAST of Sed0001541 vs. NCBI nr
Match: XP_023522249.1 (transcription factor bHLH118-like [Cucurbita pepo subsp. pepo] >XP_023534748.1 transcription factor bHLH118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.2 bits (609), Expect = 3.8e-59
Identity = 150/258 (58.14%), Postives = 191/258 (74.03%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSL-------PPSIDISPILDTNNINTFSKKPQNKGRRKN 60
           M  N+ SPFS+DLGE+LF LPSL       P    ISP LD N   T  +KP+N GRRKN
Sbjct: 1   MNDNVGSPFSYDLGEELFPLPSLSCIDIPVPQFPSISP-LDNNKSGT--QKPKN-GRRKN 60

Query: 61  PPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKR 120
           PPA    +S+   GD+  PN+HKKKKI+HR+VERQRR +M+SLY+ LRSL+P EYLKGKR
Sbjct: 61  PPA----NSSDDIGDMN-PNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKR 120

Query: 121 SICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAK 180
           SICD M EAVKYI+ M+++IQ LS +RDELK++S KN  AT  V+TL+SSK +SV+VRA+
Sbjct: 121 SICDHMLEAVKYIRHMQSRIQDLSNKRDELKRVSDKNPVAT-MVETLDSSKRESVLVRAR 180

Query: 181 T-GPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVV---H 240
               GVQV+++T+TQ+   +SNILR L  +GLEILS IST +N  F+ TI+CQ +V   H
Sbjct: 181 NESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNH 240

Query: 241 DGTIDVSELKNKLMNLEY 248
             +IDVSEL++KLMNLEY
Sbjct: 241 TPSIDVSELQHKLMNLEY 248

[Close]

BLAST of Sed0001541 vs. NCBI nr
Match: XP_022995893.1 (transcription factor bHLH118-like [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 8.5e-59
Identity = 150/258 (58.14%), Postives = 193/258 (74.81%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSL-------PPSIDISPILDTNNINTFSKKPQNKGRRKN 60
           M  NI SPFS+DLGE+LF LPSL       P    ISP LD+N   + S+KP+N GRRKN
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLSCIDIPVPQFPSISP-LDSN--KSGSQKPKN-GRRKN 60

Query: 61  PPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKR 120
           PPA    +S+   GD+  PN+HKKKKI+HR+VERQRR +M+SLY+ LRSL+P EYLKGKR
Sbjct: 61  PPA----NSSDDIGDMN-PNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKR 120

Query: 121 SICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAK 180
           SICD M EAVKYI+ M+++IQ LS +RDELK++S KN  AT  V+TL+SSK +SV+VRA+
Sbjct: 121 SICDHMLEAVKYIRHMQSRIQDLSNKRDELKRVSDKNPVAT-MVETLDSSKRESVLVRAR 180

Query: 181 TGPG-VQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVV---H 240
              G VQV+++T+TQ+   +SNILR L  +GLEILS IST +N  F+ TI+CQ +V   H
Sbjct: 181 NESGEVQVVLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNH 240

Query: 241 DGTIDVSELKNKLMNLEY 248
             +IDVSEL++KL+NLEY
Sbjct: 241 TPSIDVSELQHKLINLEY 248

[Close]

BLAST of Sed0001541 vs. NCBI nr
Match: XP_022969885.1 (transcription factor bHLH120-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-58
Identity = 137/250 (54.80%), Postives = 179/250 (71.60%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSLPPSIDISPILDTNNINTFSKKPQNKGRRKNPPAAEAG 60
           ME NI+SPFSF+ G++LF LP         PI    N N  SKKP+   RR+ PP     
Sbjct: 1   MEFNIESPFSFEFGDELFPLP---------PISPLENTNIASKKPKTCSRRQPPPN---- 60

Query: 61  SSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMG 120
                T + E PN+ K+KKI+HR+VERQRR EMSSLYS LRSL+P EYLKGKRSI D M 
Sbjct: 61  -----TSNDENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMH 120

Query: 121 EAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAKTGPGVQV 180
           E VKYIQ ++ +IQQLS QRDELK LS +N+    AV+TLNSS+ DSVVV +  G G+QV
Sbjct: 121 ETVKYIQSIQTRIQQLSNQRDELKSLSGENM-PVGAVETLNSSRRDSVVVSSTNGLGIQV 180

Query: 181 IVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDG---TIDVSE 240
           ++DT+ Q+   +S+IL+VL  +GLEI+SCI+T +N+R++ TI+CQVV +DG   +IDV E
Sbjct: 181 VLDTAIQHRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQVVENDGCYPSIDVFE 231

Query: 241 LKNKLMNLEY 248
           L+++L+NLEY
Sbjct: 241 LRHQLINLEY 231

[Close]

BLAST of Sed0001541 vs. NCBI nr
Match: XP_022958459.1 (transcription factor bHLH118-like [Cucurbita moschata] >KAG6606137.1 Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.1 bits (601), Expect = 3.2e-58
Identity = 150/258 (58.14%), Postives = 189/258 (73.26%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSL-------PPSIDISPILDTNNINTFSKKPQNKGRRKN 60
           M  NI SPFS+DLGE+LF LPSL       P    ISP LD N   T  +KP+N GRRK 
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLSCIDIPVPQFPSISP-LDNNKSGT--QKPKN-GRRKK 60

Query: 61  PPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKR 120
           PPA    +S+   GD+  PN+HKKKKI+HR+VERQRR +M+SLY+ LRSL+P EYLKGKR
Sbjct: 61  PPA----NSSDDIGDMN-PNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKR 120

Query: 121 SICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAK 180
           SICD M EAVKYI+ M+++IQ L  +RDELK++S KN  AT  V+TL+SSK DSV+VRA+
Sbjct: 121 SICDHMLEAVKYIRHMQSRIQVLCNKRDELKRVSDKNPVAT-MVETLDSSKRDSVLVRAR 180

Query: 181 T-GPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVV---H 240
               GVQV+++T+TQ+   +SNILR L  +GLEILS IST +N  F+ TI+CQ +V   H
Sbjct: 181 NESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNH 240

Query: 241 DGTIDVSELKNKLMNLEY 248
             +IDVSEL++KLMNLEY
Sbjct: 241 TPSIDVSELQHKLMNLEY 248

[Close]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 70/205 (34.15%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 48  KGRRKNPPAAEAGSSNGITGD---IEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLI 107
           KG ++  P + AG S G  G     E  ++ KKKK++HR++ERQRR EM++L++ LR+ +
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 108 PKEYLKGKRSICDQMGEAVKYIQQMENKIQQLSIQRDELKK---LSYK-NVGATSAVQTL 167
           P +Y+KGKR++ D +  AV +I+  E +I++LS +RDEL +     YK N         +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 168 NSSKSDSVVVRAKTGPGVQVIVDTSTQNMNL--ISNILRVLTVDGLEILSCISTNINKRF 227
             S+  +V+V+     G++V+V +++       +S +L  +   GLE++S  +T +N R 
Sbjct: 130 GKSEPATVMVQPHVS-GLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRL 189

Query: 228 VCTIDCQVVVHDGTIDVSELKNKLM 244
           + TI  +V    G ID+  L+ KL+
Sbjct: 190 MHTIQVEVNSF-GCIDLLWLQQKLV 212

[Close]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 63/172 (36.63%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 76  KKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQ 135
           K+KK++HRN+ERQRR EM+ L++ LRS +P +Y+KGKR++ D +  AV +I+  + +I+ 
Sbjct: 25  KEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKD 84

Query: 136 LSIQRDELKKLSYKNVGATSAVQTLNSSKSD--SVVVRAKTGPGVQVIVDTSTQNMNL-- 195
           LS +RDELK+        T +     SS+S+  SV+V+     G +V+V +    +    
Sbjct: 85  LSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVS-GFEVVVSSLASGLEAWP 144

Query: 196 ISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDGTIDVSELKNKLM 244
           +S +L VL   GLE++S ++  +N+R + TI  +V   D   D++ L+ KL+
Sbjct: 145 LSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CFDLAWLQQKLI 194

[Close]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19
Identity = 66/174 (37.93%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 78  KKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQLS 137
           +K++HR  ERQRR EM+SLY+ LRSL+P  ++KGKRS  DQ+ EAV YI+ ++ KI++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 138 IQRDELKKLSYKNVGATSAVQTLNS----SKSDSVVVRAKTGPGVQVIVDT-STQNMNLI 197
           ++RD+L  LS  ++  +S           S  + VVVR +   GV++++ +         
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVR-QCLVGVEIMLSSRCCGGQPRF 121

Query: 198 SNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDGTIDVSELKNKLMNLE 247
           S++L+VL+  GL +L+ IS+ ++ R V TI  +V      ID++EL+ +L+ ++
Sbjct: 122 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot
Match: Q9LQ08 (Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.5e-18
Identity = 74/237 (31.22%), Postives = 127/237 (53.59%), Query Frame = 0


Query: 29  ISPILDTNNINTFSKKPQNKGRRKNPPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQ 88
           +SP +   N + F     NK    N   +    + G     +  +D + KK+ HR++ERQ
Sbjct: 26  LSPFISYQNNDVF-HSITNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQ 85

Query: 89  RRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSY 148
           RR E+SSL+  LR+L+P +Y++GKRS  D + +AV YI+ ++ KI++L+ +R+ +KK+  
Sbjct: 86  RRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVIS 145

Query: 149 KNVGATSAVQTLNSSKSDS-----------------VVVRAKTGPGVQVIVDTST-QNMN 208
                 SA++   SS S S                  VV      GV++I+     +N +
Sbjct: 146 ATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKS 205

Query: 209 LISNILRVLTVD-GLEILSCISTNINKRFVCTIDCQVVVHDG-TIDVSELKNKLMNL 246
            +S++L++L  +    ++SC+S    +RF+ TI  Q  V DG  I++ ELK+K+M +
Sbjct: 206 CLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ--VEDGKQINILELKDKIMTM 259

[Close]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.2e-16
Identity = 59/182 (32.42%), Postives = 112/182 (61.54%), Query Frame = 0


Query: 73  NDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENK 132
           ++ K K+  H+ +ERQRR E +SL+  LR L+P +Y+KGKRS  D + EAV YI+ ++ K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 133 IQQLSIQRDELKK-LSYKNVGATSAVQTLNSSKSDSV------VVRAKTGPGVQVIVDTS 192
           I+++S +RD +K+ +++ +     ++++L SS    V      VV      G++++V   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 193 TQNMNLISNILRVLTVDG-LEILSCISTNINKRFVCTIDCQVVVHDG-TIDVSELKNKLM 246
            ++ + +S++L++L  +    I+SCIST +++ F+ TI  +  V +G  +  SEL+ K++
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASE--VEEGIEVYFSELQEKII 249

[Close]

BLAST of Sed0001541 vs. ExPASy TrEMBL
Match: A0A6J1E8G7 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 145/259 (55.98%), Postives = 183/259 (70.66%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSLPPSID---------ISPILDTNNINTFSKKPQNKGRR 60
           ME NI+SP SFDLG++LF LPS+   ID         ISP+    N  + SK+P+   RR
Sbjct: 1   MEFNIESPISFDLGDELFPLPSISSCIDNISVPQFPSISPL---ENDKSASKRPKRSSRR 60

Query: 61  KNPPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKG 120
             PP A          + E PND K+KKI+HR+VERQRR EMSSLYS LRSL+P EYLKG
Sbjct: 61  NPPPNA---------SNDENPNDQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKG 120

Query: 121 KRSICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVR 180
           K SI D M E VKYIQ M+ +I+QLS +RDELK LS +N+ A   V+TLNSS+ DSVVVR
Sbjct: 121 KPSISDHMHETVKYIQYMQRRIRQLSDKRDELKNLSGENM-AVGMVETLNSSRRDSVVVR 180

Query: 181 AKTGPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDG 240
           +K G G+QV++DT+TQ+   +SNILRVL V+GLEILSCI+  +N+R++ TI+CQ V  DG
Sbjct: 181 SKNGLGIQVVLDTTTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ-VESDG 240

Query: 241 ---TIDVSELKNKLMNLEY 248
              +IDV EL++KL NLEY
Sbjct: 241 FYPSIDVCELQHKLTNLEY 245

[Close]

BLAST of Sed0001541 vs. ExPASy TrEMBL
Match: A0A6J1K9B6 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.1e-59
Identity = 150/258 (58.14%), Postives = 193/258 (74.81%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSL-------PPSIDISPILDTNNINTFSKKPQNKGRRKN 60
           M  NI SPFS+DLGE+LF LPSL       P    ISP LD+N   + S+KP+N GRRKN
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLSCIDIPVPQFPSISP-LDSN--KSGSQKPKN-GRRKN 60

Query: 61  PPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKR 120
           PPA    +S+   GD+  PN+HKKKKI+HR+VERQRR +M+SLY+ LRSL+P EYLKGKR
Sbjct: 61  PPA----NSSDDIGDMN-PNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKR 120

Query: 121 SICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAK 180
           SICD M EAVKYI+ M+++IQ LS +RDELK++S KN  AT  V+TL+SSK +SV+VRA+
Sbjct: 121 SICDHMLEAVKYIRHMQSRIQDLSNKRDELKRVSDKNPVAT-MVETLDSSKRESVLVRAR 180

Query: 181 TGPG-VQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVV---H 240
              G VQV+++T+TQ+   +SNILR L  +GLEILS IST +N  F+ TI+CQ +V   H
Sbjct: 181 NESGEVQVVLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNH 240

Query: 241 DGTIDVSELKNKLMNLEY 248
             +IDVSEL++KL+NLEY
Sbjct: 241 TPSIDVSELQHKLINLEY 248

[Close]

BLAST of Sed0001541 vs. ExPASy TrEMBL
Match: A0A6J1I182 (transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.0e-59
Identity = 137/250 (54.80%), Postives = 179/250 (71.60%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSLPPSIDISPILDTNNINTFSKKPQNKGRRKNPPAAEAG 60
           ME NI+SPFSF+ G++LF LP         PI    N N  SKKP+   RR+ PP     
Sbjct: 1   MEFNIESPFSFEFGDELFPLP---------PISPLENTNIASKKPKTCSRRQPPPN---- 60

Query: 61  SSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMG 120
                T + E PN+ K+KKI+HR+VERQRR EMSSLYS LRSL+P EYLKGKRSI D M 
Sbjct: 61  -----TSNDENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMH 120

Query: 121 EAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAKTGPGVQV 180
           E VKYIQ ++ +IQQLS QRDELK LS +N+    AV+TLNSS+ DSVVV +  G G+QV
Sbjct: 121 ETVKYIQSIQTRIQQLSNQRDELKSLSGENM-PVGAVETLNSSRRDSVVVSSTNGLGIQV 180

Query: 181 IVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDG---TIDVSE 240
           ++DT+ Q+   +S+IL+VL  +GLEI+SCI+T +N+R++ TI+CQVV +DG   +IDV E
Sbjct: 181 VLDTAIQHRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQVVENDGCYPSIDVFE 231

Query: 241 LKNKLMNLEY 248
           L+++L+NLEY
Sbjct: 241 LRHQLINLEY 231

[Close]

BLAST of Sed0001541 vs. ExPASy TrEMBL
Match: A0A6J1H558 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58
Identity = 150/258 (58.14%), Postives = 189/258 (73.26%), Query Frame = 0


Query: 1   MELNIDSPFSFDLGEDLFSLPSL-------PPSIDISPILDTNNINTFSKKPQNKGRRKN 60
           M  NI SPFS+DLGE+LF LPSL       P    ISP LD N   T  +KP+N GRRK 
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLSCIDIPVPQFPSISP-LDNNKSGT--QKPKN-GRRKK 60

Query: 61  PPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKR 120
           PPA    +S+   GD+  PN+HKKKKI+HR+VERQRR +M+SLY+ LRSL+P EYLKGKR
Sbjct: 61  PPA----NSSDDIGDMN-PNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKR 120

Query: 121 SICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAK 180
           SICD M EAVKYI+ M+++IQ L  +RDELK++S KN  AT  V+TL+SSK DSV+VRA+
Sbjct: 121 SICDHMLEAVKYIRHMQSRIQVLCNKRDELKRVSDKNPVAT-MVETLDSSKRDSVLVRAR 180

Query: 181 T-GPGVQVIVDTSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVV---H 240
               GVQV+++T+TQ+   +SNILR L  +GLEILS IST +N  F+ TI+CQ +V   H
Sbjct: 181 NESGGVQVVLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNH 240

Query: 241 DGTIDVSELKNKLMNLEY 248
             +IDVSEL++KLMNLEY
Sbjct: 241 TPSIDVSELQHKLMNLEY 248

[Close]

BLAST of Sed0001541 vs. ExPASy TrEMBL
Match: A0A5A7TN30 (Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003200 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 137/248 (55.24%), Postives = 178/248 (71.77%), Query Frame = 0


Query: 4   NIDSPFSFDLGEDLFSLPSLPPSIDISPILDTNNINTFSKKPQNKGRRKNPPAAEAGSSN 63
           N++SPFSFDLGEDL  LPSLP S  ISP LD N+ N  S+KP+N GRRK P      + N
Sbjct: 5   NVESPFSFDLGEDLVPLPSLPSSSVISPPLD-NDGNRVSQKPKN-GRRKKP---LPNTCN 64

Query: 64  GITGDIEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAV 123
              GD E  ++ KKKKIIHR+VERQRR EMSSLY+ LRSL+P EYLKGKRSI D M E V
Sbjct: 65  DDGGD-ENLDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETV 124

Query: 124 KYIQQMENKIQQLSIQRDELKKLSYKNVGATSAVQTLNSSKSDSVVVRAKTGPGVQVIVD 183
            YIQ M+ +IQQL  +RD+L++L+ + +      +TLNSS+ DSVVVRAK G G+QV++D
Sbjct: 125 SYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVVLD 184

Query: 184 TSTQNMNLISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDG----TIDVSELK 243
           T+T++   +S  ++ L  +GLEIL+CIS  +N+RF+ TI+CQ ++ D     TID S L+
Sbjct: 185 TATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDASMLQ 244

Query: 244 NKLMNLEY 248
           +KL NLEY
Sbjct: 245 HKLANLEY 246

[Close]

BLAST of Sed0001541 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-22
Identity = 70/205 (34.15%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 48  KGRRKNPPAAEAGSSNGITGD---IEIPNDHKKKKIIHRNVERQRRHEMSSLYSDLRSLI 107
           KG ++  P + AG S G  G     E  ++ KKKK++HR++ERQRR EM++L++ LR+ +
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 108 PKEYLKGKRSICDQMGEAVKYIQQMENKIQQLSIQRDELKK---LSYK-NVGATSAVQTL 167
           P +Y+KGKR++ D +  AV +I+  E +I++LS +RDEL +     YK N         +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 168 NSSKSDSVVVRAKTGPGVQVIVDTSTQNMNL--ISNILRVLTVDGLEILSCISTNINKRF 227
             S+  +V+V+     G++V+V +++       +S +L  +   GLE++S  +T +N R 
Sbjct: 130 GKSEPATVMVQPHVS-GLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRL 189

Query: 228 VCTIDCQVVVHDGTIDVSELKNKLM 244
           + TI  +V    G ID+  L+ KL+
Sbjct: 190 MHTIQVEVNSF-GCIDLLWLQQKLV 212

[Close]

BLAST of Sed0001541 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 7.5e-21
Identity = 63/172 (36.63%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 76  KKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQ 135
           K+KK++HRN+ERQRR EM+ L++ LRS +P +Y+KGKR++ D +  AV +I+  + +I+ 
Sbjct: 25  KEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKD 84

Query: 136 LSIQRDELKKLSYKNVGATSAVQTLNSSKSD--SVVVRAKTGPGVQVIVDTSTQNMNL-- 195
           LS +RDELK+        T +     SS+S+  SV+V+     G +V+V +    +    
Sbjct: 85  LSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVS-GFEVVVSSLASGLEAWP 144

Query: 196 ISNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDGTIDVSELKNKLM 244
           +S +L VL   GLE++S ++  +N+R + TI  +V   D   D++ L+ KL+
Sbjct: 145 LSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVNSFD-CFDLAWLQQKLI 194

[Close]

BLAST of Sed0001541 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-20
Identity = 66/174 (37.93%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 78  KKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQLS 137
           +K++HR  ERQRR EM+SLY+ LRSL+P  ++KGKRS  DQ+ EAV YI+ ++ KI++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 138 IQRDELKKLSYKNVGATSAVQTLNS----SKSDSVVVRAKTGPGVQVIVDT-STQNMNLI 197
           ++RD+L  LS  ++  +S           S  + VVVR +   GV++++ +         
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVR-QCLVGVEIMLSSRCCGGQPRF 121

Query: 198 SNILRVLTVDGLEILSCISTNINKRFVCTIDCQVVVHDGTIDVSELKNKLMNLE 247
           S++L+VL+  GL +L+ IS+ ++ R V TI  +V      ID++EL+ +L+ ++
Sbjct: 122 SSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]

BLAST of Sed0001541 vs. TAIR 10
Match: AT1G62975.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-19
Identity = 74/237 (31.22%), Postives = 127/237 (53.59%), Query Frame = 0


Query: 29  ISPILDTNNINTFSKKPQNKGRRKNPPAAEAGSSNGITGDIEIPNDHKKKKIIHRNVERQ 88
           +SP +   N + F     NK    N   +    + G     +  +D + KK+ HR++ERQ
Sbjct: 26  LSPFISYQNNDVF-HSITNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQ 85

Query: 89  RRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENKIQQLSIQRDELKKLSY 148
           RR E+SSL+  LR+L+P +Y++GKRS  D + +AV YI+ ++ KI++L+ +R+ +KK+  
Sbjct: 86  RRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVIS 145

Query: 149 KNVGATSAVQTLNSSKSDS-----------------VVVRAKTGPGVQVIVDTST-QNMN 208
                 SA++   SS S S                  VV      GV++I+     +N +
Sbjct: 146 ATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKS 205

Query: 209 LISNILRVLTVD-GLEILSCISTNINKRFVCTIDCQVVVHDG-TIDVSELKNKLMNL 246
            +S++L++L  +    ++SC+S    +RF+ TI  Q  V DG  I++ ELK+K+M +
Sbjct: 206 CLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQ--VEDGKQINILELKDKIMTM 259

[Close]

BLAST of Sed0001541 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 59/182 (32.42%), Postives = 112/182 (61.54%), Query Frame = 0


Query: 73  NDHKKKKIIHRNVERQRRHEMSSLYSDLRSLIPKEYLKGKRSICDQMGEAVKYIQQMENK 132
           ++ K K+  H+ +ERQRR E +SL+  LR L+P +Y+KGKRS  D + EAV YI+ ++ K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 133 IQQLSIQRDELKK-LSYKNVGATSAVQTLNSSKSDSV------VVRAKTGPGVQVIVDTS 192
           I+++S +RD +K+ +++ +     ++++L SS    V      VV      G++++V   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 193 TQNMNLISNILRVLTVDG-LEILSCISTNINKRFVCTIDCQVVVHDG-TIDVSELKNKLM 246
            ++ + +S++L++L  +    I+SCIST +++ F+ TI  +  V +G  +  SEL+ K++
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASE--VEEGIEVYFSELQEKII 249

The following BLAST results are available for this feature:

BLAST of Sed0001541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922335.1	2.9e-59	55.98	transcription factor bHLH118-like [Cucurbita moschata]	[more]
XP_023522249.1	3.8e-59	58.14	transcription factor bHLH118-like [Cucurbita pepo subsp. pepo] >XP_023534748.1 t...	[more]
XP_022995893.1	8.5e-59	58.14	transcription factor bHLH118-like [Cucurbita maxima]	[more]
XP_022969885.1	1.4e-58	54.80	transcription factor bHLH120-like [Cucurbita maxima]	[more]
XP_022958459.1	3.2e-58	58.14	transcription factor bHLH118-like [Cucurbita moschata] >KAG6606137.1 Transcripti...	[more]

BLAST of Sed0001541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	1.2e-20	34.15	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI0	1.1e-19	36.63	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9FLI1	3.1e-19	37.93	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9LQ08	7.5e-18	31.22	Transcription factor bHLH125 OS=Arabidopsis thaliana OX=3702 GN=BHLH125 PE=2 SV=...	[more]
Q9LN95	3.2e-16	32.42	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]

BLAST of Sed0001541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8G7	1.4e-59	55.98	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 ...	[more]
A0A6J1K9B6	4.1e-59	58.14	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE...	[more]
A0A6J1I182	7.0e-59	54.80	transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE...	[more]
A0A6J1H558	1.6e-58	58.14	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 ...	[more]
A0A5A7TN30	1.1e-56	55.24	Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Sed0001541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25410.1	8.8e-22	34.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	7.5e-21	36.63	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	2.2e-20	37.93	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	5.3e-19	31.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	2.2e-17	32.42	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..74
None	No IPR available	PANTHER	PTHR13935:SF110	HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 45..245
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 78..147 e-value: 6.24308E-26 score: 94.6775
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 83..135 e-value: 4.6E-5 score: 32.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 79..130 e-value: 1.3E-8 score: 34.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 77..129 score: 12.652187
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 70..158 e-value: 4.9E-13 score: 50.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 76..145
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 45..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001541.1	Sed0001541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity