Sed0001534 (gene) Chayote v1

Overview


Name	Sed0001534
Type	gene
Organism	Sechium edule (Chayote v1)
Description	COP9 signalosome complex subunit 4
Location	LG13: 21763157 .. 21770636 (+)
RNA-Seq Expression	Sed0001534
Synteny	Sed0001534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATAATAGCTCCGATCTAGAACCGGAAAATAGAAGCAGTTCCGTCCATTACAGGGGGCGGGGTTGAGCTTGCGGAGGAGAGAAATTTCCGGCGGCTTAGGGTTTCCCGTTTCGAATCCGAAGGTTGAAGACGAAGCAGCGAAGAGCTATGGAGATCGCCTTTGCTAGCGCCTCTGCTATCTCTGACCAGAGGCAGAAGATCGAACAGTATAAGCATATTCTCCACAATGTTATGTCGTCAGACGATTCAGTTCAAGCCAAGAAGTTCATCGATCACAGTGAGATTAATCGCTTATTCTGTTTGTTTTTTTTGTCATATGTTGTAGTTTTTCTCCCAATTCCTGCGTTTCTTCAATTTACTGTGAAGTTAGGGCTAATTATGTGACGATTCTTGATTTGCAGCTCTGTCCGATGAAGTTCCGCTTGTGGTTTCGCGGCAGCTGTTGCAGACTCTTGCGCAAGAGTTGGGAAAGTTGGAGGGGGAGACTCAAAAGGAGATTGCGCATTATATCCTTGCCCAGATTCAGCCGCGCGTCGTCTCTTTCGAGGAGCAGGTTCGTTTCTGCAATTATTCATTCAAATGCTGTAGGAATTATGTTTCGCAATTATAAGAATTGTTGGCTGATTATGATATAATTAAATTTAATTCAATCCATTGGCTTAAGTGTTGGTGTTGATTAGTGATTTAATATAATTCAACATGGTATTAGGTCCTTCGTTCGAGCACGCGTCGAGTCATTTCATCCCCAATTAGTTTTGATTTCCCCGTGATGAGCATTCTCAAAATTTCTATACCACAAGTGAGGGGGAGTGTTGGTAGATATAATTGAATTTATTCCAACTCATCAGCTTAAGTTTTTGGGATTATTGGTTATTTAACATAATTCAACAGGAATGATAAACAATCACCAATTTCAGTTTATATTTCTGTTGTGTTACTTTTAATTCTCTGAAAGAGATAGGGCGTGTGATTGAACGTGTAAACTTATGTACGTCTTTTAATCATTGGAAATGGAGGGGGATTATTTGTTTCAAAAAATGTATCAAACCATCAGGCGTGTAGCTTTCCGGTTAATGTTCTGAGTGTGGCTAGGGGCTGCAGTTTTATTTCTTTCTATTGGCCGTAGGGTGAAGGAAAAAATTTATCCTCTGTGGTTTCAGGTGTTGATAATAAGAGAGAAGCTTGCCGAATTGTATGAATCTGAGCAGCAATGGTCAAAAGCCGCTCAGATGCTCAGTGGAATTGATCTAGACTCTGGAATGAGGTATAGCATGCCTCCTTTTCCTTTCAACCTCTTTTGTGAGAGTGGGATCATTAAATTTTAATCACTGTCTATTTGGTTTCTATGTCTTTTTATGGTCTCTATCAGAGTGATCGACGAGTCATACCGGTTGTCAAAATGTGTTCAAATTGCTCGTTTATACCTTGAGGTACAATTTACTTCTGTATTGCAATTTAAATTTTATGATGGTATTTATGACAAAGGAAGGGCTATATGTGAGTAGTGACAATTTGCTATGATGTTGTGTATAAGAATTATGTTGAGCTATGTATTTTTATTTTGATAGGAAACAGAACTTTTCATTGGTGAGCGAAGTGAAAAAGTTGCAAAAGCCTATCGAAAAACATTATAAAAAACTTTACCAATCGGATACAAGATGAGTAATAAATACTATAATAAAAAAAGGGTTAGACTATTGGCCCAAAAGATGACCAAATAAATGATGTCTGTATAGTAGAGGAGAATGGTTTCAGGTAGCGTTGTTTGCATGATTTAATCATGCGGCAGTTTTTCATTGCATTGGATGGTGCTTAACAACAAATGTTTATTTTCTGTTTAGATTTAAGCGAACAAGGAAGCTCAATAAGTCTTAGTATTTCTCAATTTCTTCTTCAACAGGATGATGATGCTGTTAACGCTGAGGCTTTTATCAATAAAGCTTCATTCTTGGTTAGCAATAGTCAGCACGAAGTCCTTAATTTACAATACAAGGTTAATAATGCTTTTAGCTGTTGATGTCATTAACTTAAGGACGGCCATATCGTTTTTCTTCCATCTTTTAATACATTTGTCCATCCTTGCCCCAGGTTTGCTATGCTAGGATCTTAGACTTGAAAAGGAAGTTCTTGGAAGCTGCACTGCGTTATTATGATATATCTCAAATTGAAAAGAGACAAATTGGAGACGAGTATGTAAAAATGAGCATTTTTTTTCATGGAATATAACTATATAAGTGGTTCTTAGACTTGCTAAACAGCCATCATTCAATGATATACTTGAGGACACTGATTTTAAGAATTTGCTCACCATTGAAAGTGCTTTTATTCTGACAGGTCCCAGTTCTTAACTTCTTATTTGTCAAGTTTCTGCATTCTTGACATGTTTTGTATTTCTCATGCACTCTAGGAATTGCTAGCTTTCATTTAATTTTTTAAAAATGGCCTACTAATAAGCGTTTCACATTTCTGTCTCGTTTTCTAAATAATTTCACAATAGAATATTGACTTAAATTTACATACAGTTATTCGGTTTTTTTCTAGATGATCATTTTTCCTTTTCCTTCTCTAAGTTTAAGCGGAACTGCAAAATTGGGCTGATACTAGTAATTTTAAAGTGTTTGTTCTAATGAATGTTGACCAATTTTGTGAAACCTTTTGGTCCCTGAATTTTTCATAAATATTTAATGCAAATAGTATACTTTTGTTGATTTCTTTGAATATTTCACTCTTCTATGCTTTATGCCTTCCGCTATTTTCTTCAATTATATTATTAATTTCTTTCTTAATTATAATCCCACTTGATTTTTTAGTGTTAATCTCAAATTCTTTGAGCCTTGCATATGCCTTGGCAAAAGTAAACATTTTTGTTAAGTATCTTTTCTGCAATTCTTTTTAAAAATATATTTCTGCAATTTTTTTCTACCTATTAAACAATTATGTGCCTTCTTCAAAAAAGAAAGACTTGTATCCACACACTTTTAATATCTGTATCCTACTGTTGAATTTAGCAACTTGTTTTGAAATAAAAAATGTAAACTCATTCGTGGTGAAGTTTAAAGAAATTGTTTAGTGATTATTTTTTCTATCAACCTTTCTTCTTTTAGCATAGTTATTATATAGATGTATGTCGTTAGTTACTGTATCTATTTTTCTTTACAGAGAGATTGACGAAGAAGCATTGGAACAAGCTTTATCTGCTGCAGTGACATGTACAATATTGGCTGCTGCTGGTCCACAACGATCCCGAGTTCTTGCTACATTATACAAAGTAAATATCTATTTTTTAATGTAATGTACAGATCAGTTTGGACGGGAGTGATTTTTAAATGTGTTCTTTCTAAGTGTTGACAATTTGGTTTAGGATGAGCGTTGCTCCAAGTTAAAAATCTACCCAATACTGCAAAAGGTTCCCCTCTCTCTCTCTCTCTTATAATGTAATGTTCATTATTTGTTCTGTTGATTGACACAATGTGTGTGTAAAATTGGACTACTAGGTTTACTTGGAGAGAATTTTGCGAAAACCAGAAATTGATGCATTTGCTGAGGAGCTAAAGCCTCACCAGGTTATTGTTTTCTTATCTTTGCCTCTCTCTGGATTCTGCATTGAATCATTAGTAAATTCTTCTTTTACATTACTTCAACAGCAAGCTCTTTTGCCCGATAATTTTACTGTGCTGGATCGTGCGATGATAGAGCATAATCTTCTCAGTGCAAGCAAACTTTACACAAATATCAGGTTAAATATGGCCAGTATATATTCTCGTTCTCCTTTATTTCTTTTCTACTCGCCATAAAATTGTTTTTGGTTATTCCTATGGCAGCTTTGAAGAATTAGGCACTTTGCTGGGTATTCCTCCTCATAAGGTGTGTGATACTTTATTATACTTGATGCTTTGATAAAACTTCGTAAACTTCTTGCTGATGATCTTTAAATTGTTTTTCCTGTTTAAATTATGCATGCAATTAATTTATTGCCGTCCGTTTGAGTGAAAATGATCCTTAAATTTACTTATTTTTAAATATAAAGAGGAGAGAGAGATGGATCATATCATCAACCTATTTTTTTATTCAACAACATTTGGGGGAGGAGTATTCAAACTTATAATCTTATAGTTACGAGGTTATATCTTGTACGTGATCCTATCATTAACCTACTGAACATCTTGATATAATTCCGAGACCAAAAATACTAGAAGATCCTTCCCATATTTTATACTACTCTAGGATTCCTTTAAATTTGTTTTTATGCACTAGGATGATTCATGGTTGATCCATTATTTGCTTTCGTATGAAGGTTAGGGGATGCCGCTTAAGCTTTTGTATTATGGCTCTTGTTGGTGTGCACTTTCTAGTTCTTTTGTATAATTATACTCCCTTTGTAAATGTAATTATTAATTAACAGTAAATGCCTACATTAAGTATATATTTATGAACAAAAGGCCATGTGTTCAAATTCTCCACCCAAAATATTTTTGAATTACCAATTAAAAGTAATTGAAATTTGCAAACAACTAATACTAGCGTACAGATCTTGAATTTACTTTTCACCGAGTCGATAAAAAGTGTTCGTAATAAAGTCAGCTAATAACTCTCTTTGACCTGAAACTTCCTTGAAAATGTTCATCATTCAAAACAAGTTCTAATTTGAAGTGGTTTGAGAAGCAGATTGAGTCATCTGTAAATTGTAGATGAGATGCATTCAAGTTATCTCTGCCAGTATAAGAACTTCCAATGATCTGGATCTGGACGGCAACAACCTTCTAAAGTGATTTTTCGACTCGAACATTAGTGACTAACACAGAAAGGAAAGAAGTAGATTATCATCATATAAGCGTCTGAAAATTCTAATCCTCCCCTTTTCTTTTTCATTGACAATTACTAAACAAGAGATACTGGAGATCTGCCCTTCATATCACCTCTACTTGCAACCAAATTCTATTTCGTTCAAAGCCATATCAAGGAAAAACCAATCAACCATATCAATTGATTTCATTTTCCAGTTTGAAGATCAAAATTTTCTTCTTTCTACTTTACCTCACACCAACACCCCTTTTCAAGGATAGGTATCAAAACTTGTTCATGTCCTTTAAAGTGGCAGCTTGGCTCCCCCAAAATGGTCACATTGTGGACCTTTTAGGTCTATCCACAAACTCTAGCGATAATGTTATAAATATTGGCCGTGAGAATAATAGGTCTAGATTCTAGAATATTTATCATGTCTGTCGAAGTTTGTGTTTTGGGAATCCGGCATGAAGTTTCTCAACTCATTTAGTTACCTTTTTCTTTGTAATGTTTCGGAAAATATTCAGCAATAAAGCCATTTCGACCCAGAGTTTTGTCACATTAAAAACTTCTAACAGCTCAAAAAATCCTTACCACTCTGGATGTCTTTCCAACATTAACTTGCTGTCTGAGCTGGTTATTTAGGCATTTGTTTTCCGCCTTTGGATCTCCTACTTCCGGTTATCTGAAATGCCGATTTGGCTTTTCTGTTGTTTTGTTAGTTTAGGCCTCGTTTGATAACCATTTGATTTTTGAAATTTAAGCTCACTTTTACTCATATTTCCTACGACGTCCTCTATATTTTCAACAATGTATCTAACTTTTCTTAAGAAAGTATGTGAATCCTAACGAAATTTCAAAAATAAAACAAATTTTTGGAAGCTACTTTTTTTTGTTTCTAAATTTTGGTTTGGTGTAGGTAAAATGTAGATATCCATGTAGAAAATGACATATGGAATTGTAGTTGTTGTAGGCTTAAATTTCAAAAACCAAGAACTAAAAACAAAATAGTTATCAAACGGGACCTTAATTTCAGCTAATTGAAGTTTCAGATCCGTATGGATGTAGTCTGTCTGTCTCTAAGACGGGTTACATTTTGTATTCCTTTTTTTTTCATAGTAACTTGCTGTCTGAAATTCAATCCCAATAAAGTTGACGTTTTTCTTTCAAAGGCTAGCCCAGTTATGATATACTTTAATTGGAAAAACAGCTCATTTCATCTAGGCCTAGTTAGAGAATGTTAAGTAGAGTGTATCTGATGGAGAGGGAACTTATTTGATATTTTTCTGCTTCTGGCTTGCTAGCAGATTCTCCATATTTGTACATAAAGTATATTTCAATTGCTAATTTCGACTGTTTTTAGGCTGAGAAGATAGCATCAAGAATGATCTGCGAGGACAGAATGAGGGGATCAATTGACCAGGTTTATGCTTTGTATTATTAATTAGCCTTGAGAATCAGAACTATATTTTATTTTTATTCACATTATATTTTTTTTTTTGCACACATTATATTTTATTTACCTATGAAACTGCTATCAGATCGAAGCTATCATCCATTTTGAGGACGATATTGAAGAGCTCCAGCAATGGGATCAACAGGTATTTTCTTTGGATTTCATTTATATCCATATTTTGCTCGTTTTATATATATATAAAAGATTAAAATAGGCTCACCTTTTTTTGTACAACACCTTTTGGGGGTTGGGCGATCGATCTTGCGACCTCTAGATCGAAAATATGTCAATTATTGTTATGCTTAGCCATTTTTAAATTGCTCAACAATATTAGGACAAATTTTTTATATCTACATTTATTACACTAATTTAACTTTTTTTTAGGAAAACTTACGAGATTAGTTGAATTTAAAAAATAATTAGAAAATACGGTCACTTTAAAAGTAATAATTTAGCAAAGATAATTATTGATATCAGTGAGTATTATCGCATACTTTCTTATAATACTGATATCGATGAGCATTCTTGCATAGTGGTATTAGTAAATATTTATAATATAATATATTGTTATTAATGAGTATTTAGAATACACCCAATACTTTAGAAGTTTTCTACCTTTATAATTACTTTGGGAGAAGAACTGATTTAGTACTATTTCCCTTTTTTACAATATAAAAAGGCATCTATATTTAATTTTGCTATTTGGTTTGGTTTGGTTTGGTTGATCTGTGTAGATTGTTGGTCTGTGTCAAGCTCTGAACGACATCTTGGATGGCAGTATGGCAAATAAAGGTGTCTCCCTTCCCGTATGATCTCTTGTGCTGTTTACGAGCCCAATCCTGTGATGATTTGTAATATCTCTAAAACTTTTATCTCCTTTTTTTTTTAACCATAGTTTGAGGCTATTTTAGTTTTTTTTTTATTTTTTATTTTTCCCTTTGGAGAGGTTGGAAATTATTATTCTTTTTAGCAGTGAGTTATTTTTCTGTCGAAACTCTTAAAAAAAGAAAAGCAAGCGAAAGAGGGATAGAGTTATGAAGCCATTGAGTCAAAAAATTTAGGTTAGAGTACATTTTTATTCCTTAGGTGTTTGTTTGGTTTCAATAATGCTCACTTTTAATTTATGAAACAACAAAATTGTTAATTACATTATTGATTAAAATGATGACTAGATAATTTTAAATTCTAATATATTGGTGAAATTGTTATTTTGGTTGTGACGAAAATTTAAAAGAAAATAA

mRNA sequence

AGATAATAGCTCCGATCTAGAACCGGAAAATAGAAGCAGTTCCGTCCATTACAGGGGGCGGGGTTGAGCTTGCGGAGGAGAGAAATTTCCGGCGGCTTAGGGTTTCCCGTTTCGAATCCGAAGGTTGAAGACGAAGCAGCGAAGAGCTATGGAGATCGCCTTTGCTAGCGCCTCTGCTATCTCTGACCAGAGGCAGAAGATCGAACAGTATAAGCATATTCTCCACAATGTTATGTCGTCAGACGATTCAGTTCAAGCCAAGAAGTTCATCGATCACACTCTGTCCGATGAAGTTCCGCTTGTGGTTTCGCGGCAGCTGTTGCAGACTCTTGCGCAAGAGTTGGGAAAGTTGGAGGGGGAGACTCAAAAGGAGATTGCGCATTATATCCTTGCCCAGATTCAGCCGCGCGTCGTCTCTTTCGAGGAGCAGGTGTTGATAATAAGAGAGAAGCTTGCCGAATTGTATGAATCTGAGCAGCAATGGTCAAAAGCCGCTCAGATGCTCAGTGGAATTGATCTAGACTCTGGAATGAGAGTGATCGACGAGTCATACCGGTTGTCAAAATGTGTTCAAATTGCTCGTTTATACCTTGAGGATGATGATGCTGTTAACGCTGAGGCTTTTATCAATAAAGCTTCATTCTTGGTTAGCAATAGTCAGCACGAAGTCCTTAATTTACAATACAAGGTTTGCTATGCTAGGATCTTAGACTTGAAAAGGAAGTTCTTGGAAGCTGCACTGCGTTATTATGATATATCTCAAATTGAAAAGAGACAAATTGGAGACGAAGAGATTGACGAAGAAGCATTGGAACAAGCTTTATCTGCTGCAGTGACATGTACAATATTGGCTGCTGCTGGTCCACAACGATCCCGAGTTCTTGCTACATTATACAAAGATGAGCGTTGCTCCAAGTTAAAAATCTACCCAATACTGCAAAAGGTTTACTTGGAGAGAATTTTGCGAAAACCAGAAATTGATGCATTTGCTGAGGAGCTAAAGCCTCACCAGCAAGCTCTTTTGCCCGATAATTTTACTGTGCTGGATCGTGCGATGATAGAGCATAATCTTCTCAGTGCAAGCAAACTTTACACAAATATCAGCTTTGAAGAATTAGGCACTTTGCTGGGTATTCCTCCTCATAAGGCTGAGAAGATAGCATCAAGAATGATCTGCGAGGACAGAATGAGGGGATCAATTGACCAGATCGAAGCTATCATCCATTTTGAGGACGATATTGAAGAGCTCCAGCAATGGGATCAACAGATTGTTGGTCTGTGTCAAGCTCTGAACGACATCTTGGATGGCAGTATGGCAAATAAAGGTGTCTCCCTTCCCGTATGATCTCTTGTGCTGTTTACGAGCCCAATCCTGTGATGATTTGTAATATCTCTAAAACTTTTATCTCCTTTTTTTTTTAACCATAGTTTGAGGCTATTTTAGTTTTTTTTTTATTTTTTATTTTTCCCTTTGGAGAGGTTGGAAATTATTATTCTTTTTAGCAGTGAGTTATTTTTCTGTCGAAACTCTTAAAAAAAGAAAAGCAAGCGAAAGAGGGATAGAGTTATGAAGCCATTGAGTCAAAAAATTTAGGTTAGAGTACATTTTTATTCCTTAGGTGTTTGTTTGGTTTCAATAATGCTCACTTTTAATTTATGAAACAACAAAATTGTTAATTACATTATTGATTAAAATGATGACTAGATAATTTTAAATTCTAATATATTGGTGAAATTGTTATTTTGGTTGTGACGAAAATTTAAAAGAAAATAA

Coding sequence (CDS)

ATGGAGATCGCCTTTGCTAGCGCCTCTGCTATCTCTGACCAGAGGCAGAAGATCGAACAGTATAAGCATATTCTCCACAATGTTATGTCGTCAGACGATTCAGTTCAAGCCAAGAAGTTCATCGATCACACTCTGTCCGATGAAGTTCCGCTTGTGGTTTCGCGGCAGCTGTTGCAGACTCTTGCGCAAGAGTTGGGAAAGTTGGAGGGGGAGACTCAAAAGGAGATTGCGCATTATATCCTTGCCCAGATTCAGCCGCGCGTCGTCTCTTTCGAGGAGCAGGTGTTGATAATAAGAGAGAAGCTTGCCGAATTGTATGAATCTGAGCAGCAATGGTCAAAAGCCGCTCAGATGCTCAGTGGAATTGATCTAGACTCTGGAATGAGAGTGATCGACGAGTCATACCGGTTGTCAAAATGTGTTCAAATTGCTCGTTTATACCTTGAGGATGATGATGCTGTTAACGCTGAGGCTTTTATCAATAAAGCTTCATTCTTGGTTAGCAATAGTCAGCACGAAGTCCTTAATTTACAATACAAGGTTTGCTATGCTAGGATCTTAGACTTGAAAAGGAAGTTCTTGGAAGCTGCACTGCGTTATTATGATATATCTCAAATTGAAAAGAGACAAATTGGAGACGAAGAGATTGACGAAGAAGCATTGGAACAAGCTTTATCTGCTGCAGTGACATGTACAATATTGGCTGCTGCTGGTCCACAACGATCCCGAGTTCTTGCTACATTATACAAAGATGAGCGTTGCTCCAAGTTAAAAATCTACCCAATACTGCAAAAGGTTTACTTGGAGAGAATTTTGCGAAAACCAGAAATTGATGCATTTGCTGAGGAGCTAAAGCCTCACCAGCAAGCTCTTTTGCCCGATAATTTTACTGTGCTGGATCGTGCGATGATAGAGCATAATCTTCTCAGTGCAAGCAAACTTTACACAAATATCAGCTTTGAAGAATTAGGCACTTTGCTGGGTATTCCTCCTCATAAGGCTGAGAAGATAGCATCAAGAATGATCTGCGAGGACAGAATGAGGGGATCAATTGACCAGATCGAAGCTATCATCCATTTTGAGGACGATATTGAAGAGCTCCAGCAATGGGATCAACAGATTGTTGGTCTGTGTCAAGCTCTGAACGACATCTTGGATGGCAGTATGGCAAATAAAGGTGTCTCCCTTCCCGTATGA

Protein sequence

MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV

Homology

[Close]

BLAST of Sed0001534 vs. NCBI nr
Match: XP_022138952.1 (COP9 signalosome complex subunit 4 [Momordica charantia])

HSP 1 Score: 734.6 bits (1895), Expect = 4.6e-208
Identity = 385/398 (96.73%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D++QAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEG+TQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. NCBI nr
Match: XP_004147790.1 (COP9 signalosome complex subunit 4 [Cucumis sativus] >XP_008466585.1 PREDICTED: COP9 signalosome complex subunit 4 [Cucumis melo] >KAA0041637.1 COP9 signalosome complex subunit 4 [Cucumis melo var. makuwa] >KAE8651324.1 hypothetical protein Csa_000877 [Cucumis sativus] >TYK19621.1 COP9 signalosome complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 734.2 bits (1894), Expect = 6.1e-208
Identity = 387/398 (97.24%), Postives = 393/398 (98.74%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D VQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDRVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGE Q+EIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGEIQREIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. NCBI nr
Match: XP_022975496.1 (COP9 signalosome complex subunit 4 [Cucurbita maxima] >XP_023535953.1 COP9 signalosome complex subunit 4 [Cucurbita pepo subsp. pepo] >KAG6591323.1 COP9 signalosome complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 732.6 bits (1890), Expect = 1.8e-207
Identity = 387/398 (97.24%), Postives = 394/398 (98.99%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYK+IL+NV+SS+DSVQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKNILYNVLSSNDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGETQK+IAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGETQKDIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEI+EEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EAIIHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAIIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDI D SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDIFD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. NCBI nr
Match: XP_038905934.1 (COP9 signalosome complex subunit 4 [Benincasa hispida])

HSP 1 Score: 731.9 bits (1888), Expect = 3.0e-207
Identity = 386/398 (96.98%), Postives = 393/398 (98.74%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D VQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDRVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGETQ+EIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGETQREIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFA+ELKPHQQALL DNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAKELKPHQQALLSDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. NCBI nr
Match: XP_022937018.1 (COP9 signalosome complex subunit 4 [Cucurbita moschata])

HSP 1 Score: 729.6 bits (1882), Expect = 1.5e-206
Identity = 385/395 (97.47%), Postives = 392/395 (99.24%), Query Frame = 0


Query: 4   AFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQTLAQ 63
           AFASASAISDQRQKIEQYK+IL+NV+SS+DSVQAKKFIDHTLSDEVPLVVSRQLLQTLAQ
Sbjct: 8   AFASASAISDQRQKIEQYKNILYNVLSSNDSVQAKKFIDHTLSDEVPLVVSRQLLQTLAQ 67

Query: 64  ELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGID 123
           ELGKLEGETQK+IAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGID
Sbjct: 68  ELGKLEGETQKDIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGID 127

Query: 124 LDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCY 183
           LDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCY
Sbjct: 128 LDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCY 187

Query: 184 ARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSR 243
           ARILDLKRKFLEAALRYYDISQIEKRQIGDEEI+EEALEQALSAAVTCTILAAAGPQRSR
Sbjct: 188 ARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQRSR 247

Query: 244 VLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAM 303
           VLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAM
Sbjct: 248 VLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAM 307

Query: 304 IEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDD 363
           IEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EAIIHFEDD
Sbjct: 308 IEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAIIHFEDD 367

Query: 364 IEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           IEELQQWDQQIVGLCQALNDI D SMANKGVSLPV
Sbjct: 368 IEELQQWDQQIVGLCQALNDIFD-SMANKGVSLPV 401

[Close]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot
Match: Q8L5U0 (COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CSN4 PE=1 SV=2)

HSP 1 Score: 637.1 bits (1642), Expect = 1.3e-181
Identity = 332/398 (83.42%), Postives = 366/398 (91.96%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           M+ A  +ASAI DQRQKIEQYK IL +V+SS+D +QA++FIDH LSD+VPLVVSRQLLQ+
Sbjct: 1   MDEALTNASAIGDQRQKIEQYKLILSSVLSSNDLLQAQRFIDHILSDDVPLVVSRQLLQS 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
            AQELG+LE ETQKEIA + L QIQPRVVSFEEQ L+IREKLA LYESEQ+WSKAAQMLS
Sbjct: 61  FAQELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMR +D++++LSKC+QIARLYLEDDDAVNAEAFINKASFLVSNSQ+EVLNLQYK
Sbjct: 121 GIDLDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILD+KRKFLEAALRYY ISQIE+RQIGDEEIDE ALEQALSAAVTCTILA AGPQ
Sbjct: 181 VCYARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQ+A LPD  TVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNI F+ELGTLL I P KAEKIA+ MI +DRMRGSIDQ EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDD+EELQQWDQQI GLCQALNDILDG MA KG+S+PV
Sbjct: 361 EDDVEELQQWDQQISGLCQALNDILDG-MAKKGMSVPV 397

[Close]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot
Match: Q54B82 (COP9 signalosome complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=csn4 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.2e-95
Identity = 191/378 (50.53%), Postives = 261/378 (69.05%), Query Frame = 0


Query: 9   SAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKL 68
           SA+SD + K E+YK IL  ++ S      K FI H   +  PLV+SR +L +       L
Sbjct: 14  SALSDHKTKTEKYKSILQQLVESKQVAPLKVFITHLTDESTPLVISRTILLSFTSSHKTL 73

Query: 69  EGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGM 128
             + Q E+  ++L +IQ RVV+FEEQV  IR  LA+LYE ++ W ++A+ L  I LDS  
Sbjct: 74  PEDIQMELGIFVLDRIQNRVVAFEEQVSEIRYNLAKLYERQENWRESARCLIAIPLDSSQ 133

Query: 129 RVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILD 188
           RVI   Y++   V+IARL+LE++++  AE +IN+AS  +   +++ L L +K C+ARI+D
Sbjct: 134 RVISPEYKVKIYVKIARLFLEEEESGQAETYINRASDSLHLVKNQKLILAHKTCFARIMD 193

Query: 189 LKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSRVLATL 248
            KR FL+A+LRYYD+SQ   +       D E +  ALS A+ C IL  AGPQRSR LATL
Sbjct: 194 YKRMFLKASLRYYDLSQCLPK-------DTERM-HALSCAIVCAILDKAGPQRSRTLATL 253

Query: 249 YKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNL 308
           YKDER  +L +Y  L+K++LERIL+K E+  FAE+LKPHQ ALL D  TVLDRA+IEHNL
Sbjct: 254 YKDERSQQLGVYTFLEKMFLERILKKTEVKKFAEQLKPHQMALLSDGNTVLDRAVIEHNL 313

Query: 309 LSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDDIEELQ 368
           LSASKLY NI+F+ELG+LL I   KAEK+AS+M+CE+R+ GSIDQIE +I FE+  + L 
Sbjct: 314 LSASKLYNNITFDELGSLLEIQAEKAEKVASKMVCEERLIGSIDQIERLIQFENVGDSLT 373

Query: 369 QWDQQIVGLCQALNDILD 387
           QWD++I GLC  +N+I++
Sbjct: 374 QWDKKIEGLCIHMNNIIE 383

[Close]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot
Match: Q68FS2 (COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-94
Identity = 193/370 (52.16%), Postives = 257/370 (69.46%), Query Frame = 0


Query: 20  QYKHILHNV--MSSDDSVQA-KKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEI 79
           +Y+ IL     +S  + ++A K F++  +++ V LV+SRQLL      L  L   T KE+
Sbjct: 25  KYRQILEKAIQLSGTEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEV 84

Query: 80  AHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYR 139
            H+ L ++QPRV+SFEEQV  IR++LA +YE E+ W  AAQ+L GI L++G +  +  Y+
Sbjct: 85  YHFTLEKVQPRVISFEEQVASIRQRLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYK 144

Query: 140 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEA 199
           L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204

Query: 200 ALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSK 259
           A RY ++S    + I  E    EAL+ AL     CTILA+AG QRSR+LATL+KDERC +
Sbjct: 205 AQRYNELSY---KTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQ 264

Query: 260 LKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYT 319
           L  Y IL+K+YL+RI+R  ++  FA  L PHQ+A   D  ++LDRA+IEHNLLSASKLY 
Sbjct: 265 LAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYN 324

Query: 320 NISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDDIEELQQWDQQIVG 379
           NI+FEELG LL IP  KAEKIAS+MI E RM G IDQI+ I+HFE   E L  WD+QI  
Sbjct: 325 NITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETR-EALPTWDKQIQS 384

Query: 380 LCQALNDILD 387
           LC  +N++L+
Sbjct: 385 LCFQVNNLLE 386

[Close]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot
Match: Q3SZA0 (COP9 signalosome complex subunit 4 OS=Bos taurus OX=9913 GN=COPS4 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.7e-94
Identity = 195/370 (52.70%), Postives = 256/370 (69.19%), Query Frame = 0


Query: 20  QYKHILHNV--MSSDDSVQA-KKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEI 79
           +Y+ IL     +S  + ++A K F++  +++ V LV+SRQLL      L  L   T KEI
Sbjct: 25  KYRQILEKAIQLSGAEQLEALKAFVESMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEI 84

Query: 80  AHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYR 139
            H+ L +IQPRV+SFEEQV  IR+ LA +YE E+ W  AAQ+L GI L++G +  +  Y+
Sbjct: 85  YHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVLVGIPLETGQKQYNVDYK 144

Query: 140 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEA 199
           L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204

Query: 200 ALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSK 259
           A RY ++S    + I  E    EAL+ AL     CTILA+AG QRSR+LATL+KDERC +
Sbjct: 205 AQRYNELSY---KTIVHESERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQ 264

Query: 260 LKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYT 319
           L  Y IL+K+YL+RI+R  ++  FA  L PHQ+A   D  ++LDRA+IEHNLLSASKLY 
Sbjct: 265 LAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYN 324

Query: 320 NISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDDIEELQQWDQQIVG 379
           NI+FEELG LL IP  KAEKIAS+MI E RM G IDQI+ I+HFE   E L  WD+QI  
Sbjct: 325 NITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETR-EALPTWDKQIQS 384

Query: 380 LCQALNDILD 387
           LC  +N++L+
Sbjct: 385 LCFQVNNLLE 386

[Close]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot
Match: Q6P0H6 (COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN=cops4 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.6e-94
Identity = 192/370 (51.89%), Postives = 254/370 (68.65%), Query Frame = 0


Query: 20  QYKHILHNVMSSDDSVQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEI 79
           +Y+ IL   +   D+ Q    K F++  +++ V LV+SRQLL      L  L  +  K +
Sbjct: 25  KYRQILEKALQFTDAEQLEALKAFVEAMVNENVSLVISRQLLTDFCAHLPNLPDDIAKVV 84

Query: 80  AHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYR 139
            H+ L +IQPRV+SFEEQV  IR+ LA +YE ++ W  AAQ+L GI L++G +  +  Y+
Sbjct: 85  CHFTLEKIQPRVISFEEQVASIRQHLATIYEKQEDWRNAAQVLVGIPLETGQKQYNVDYK 144

Query: 140 LSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEA 199
           L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EA
Sbjct: 145 LDTYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204

Query: 200 ALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSK 259
           A RY ++S    + I  E    EAL+ AL     CTILA+AG QRSR+LATL+KDERC +
Sbjct: 205 AQRYNELSY---KSIVHETERLEALKHALH----CTILASAGQQRSRMLATLFKDERCQQ 264

Query: 260 LKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYT 319
           L  Y IL+K+YL+RI+R  ++  FA  L PHQ+A   D  ++LDRA+IEHNLLSASKLY 
Sbjct: 265 LAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYN 324

Query: 320 NISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFEDDIEELQQWDQQIVG 379
           NI+FEELG LL IPP KAEKIAS+MI E RM G IDQI+ I+HFE   E L  WD+QI  
Sbjct: 325 NITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQIDGIVHFETR-EPLPTWDKQIQS 384

Query: 380 LCQALNDILD 387
           LC  +N++L+
Sbjct: 385 LCFQVNNLLE 386

[Close]

BLAST of Sed0001534 vs. ExPASy TrEMBL
Match: A0A6J1CCN1 (COP9 signalosome complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111010001 PE=4 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.2e-208
Identity = 385/398 (96.73%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D++QAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEG+TQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. ExPASy TrEMBL
Match: A0A5A7TJ03 (COP9 signalosome complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00070 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 2.9e-208
Identity = 387/398 (97.24%), Postives = 393/398 (98.74%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D VQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDRVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGE Q+EIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGEIQREIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. ExPASy TrEMBL
Match: A0A1S3CRN4 (COP9 signalosome complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103503958 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 2.9e-208
Identity = 387/398 (97.24%), Postives = 393/398 (98.74%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D VQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDRVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGE Q+EIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGEIQREIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. ExPASy TrEMBL
Match: A0A6J1IEE2 (COP9 signalosome complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111474891 PE=4 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.5e-208
Identity = 387/398 (97.24%), Postives = 394/398 (98.99%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYK+IL+NV+SS+DSVQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKNILYNVLSSNDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGETQK+IAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGETQKDIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEI+EEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EAIIHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAIIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDDIEELQQWDQQIVGLCQALNDI D SMANKGVSLPV
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDIFD-SMANKGVSLPV 397

[Close]

BLAST of Sed0001534 vs. ExPASy TrEMBL
Match: A0A0A0LG28 (PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G855380 PE=4 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.5e-208
Identity = 386/397 (97.23%), Postives = 392/397 (98.74%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           ME AFASASAISDQRQKIEQYKHIL+NV+SS+D VQAKKFIDHTLSDEVPLVVSRQLLQT
Sbjct: 1   MESAFASASAISDQRQKIEQYKHILYNVLSSNDRVQAKKFIDHTLSDEVPLVVSRQLLQT 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
           LAQELGKLEGE Q+EIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS
Sbjct: 61  LAQELGKLEGEIQREIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK
Sbjct: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ
Sbjct: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMI EDRMRGSIDQ+EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQVEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLP 398
           EDDIEELQQWDQQIVGLCQALNDILD SMANKGVSLP
Sbjct: 361 EDDIEELQQWDQQIVGLCQALNDILD-SMANKGVSLP 396

[Close]

BLAST of Sed0001534 vs. TAIR 10
Match: AT5G42970.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 637.1 bits (1642), Expect = 9.4e-183
Identity = 332/398 (83.42%), Postives = 366/398 (91.96%), Query Frame = 0


Query: 1   MEIAFASASAISDQRQKIEQYKHILHNVMSSDDSVQAKKFIDHTLSDEVPLVVSRQLLQT 60
           M+ A  +ASAI DQRQKIEQYK IL +V+SS+D +QA++FIDH LSD+VPLVVSRQLLQ+
Sbjct: 1   MDEALTNASAIGDQRQKIEQYKLILSSVLSSNDLLQAQRFIDHILSDDVPLVVSRQLLQS 60

Query: 61  LAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120
            AQELG+LE ETQKEIA + L QIQPRVVSFEEQ L+IREKLA LYESEQ+WSKAAQMLS
Sbjct: 61  FAQELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLS 120

Query: 121 GIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYK 180
           GIDLDSGMR +D++++LSKC+QIARLYLEDDDAVNAEAFINKASFLVSNSQ+EVLNLQYK
Sbjct: 121 GIDLDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYK 180

Query: 181 VCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEIDEEALEQALSAAVTCTILAAAGPQ 240
           VCYARILD+KRKFLEAALRYY ISQIE+RQIGDEEIDE ALEQALSAAVTCTILA AGPQ
Sbjct: 181 VCYARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQ 240

Query: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQQALLPDNFTVLD 300
           RSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQ+A LPD  TVLD
Sbjct: 241 RSRVLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLD 300

Query: 301 RAMIEHNLLSASKLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHF 360
           RAMIEHNLLSASKLYTNI F+ELGTLL I P KAEKIA+ MI +DRMRGSIDQ EA+IHF
Sbjct: 301 RAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHF 360

Query: 361 EDDIEELQQWDQQIVGLCQALNDILDGSMANKGVSLPV 399
           EDD+EELQQWDQQI GLCQALNDILDG MA KG+S+PV
Sbjct: 361 EDDVEELQQWDQQISGLCQALNDILDG-MAKKGMSVPV 397

[Close]

BLAST of Sed0001534 vs. TAIR 10
Match: AT5G64760.1 (regulatory particle non-ATPase subunit 5B )

HSP 1 Score: 55.8 bits (133), Expect = 8.9e-08
Identity = 87/353 (24.65%), Postives = 146/353 (41.36%), Query Frame = 0


Query: 36  QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQV 95
           QA ++ID TL  E  + + + L    A   GK+  E ++     +LA+I+       E  
Sbjct: 74  QAMQYIDQTLDIETRIELIKTLNNVAA---GKIYVEIERARLTKMLAKIKEEQGLIAEAA 133

Query: 96  LIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVN 155
            +++E   E + +  +  K A +L  + L    +    +  LS+ +   R++  D D   
Sbjct: 134 DLMQEVAVETFGAMAKTEKIAFILEQVRLCLDQKDFVRAQILSRKIN-PRVF--DADTTK 193

Query: 156 AEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYY-------DISQIEK 215
            +    +   +V  +  ++  L         L LKR + E  +RYY       +I +  K
Sbjct: 194 EKKKPKEGENMVEEAPADIPTL---------LVLKRIYYELMIRYYSHNNEYIEICRSYK 253

Query: 216 RQIGDEEIDEEALEQALSAAVTCTILAAA--GPQRSRVLATLYKDERCSKLKIYPILQK- 275
                  + E   +        C  LA A   P +S +L    +D++ S++  + +L K 
Sbjct: 254 AIYDIPSVKENPEQWIPVLRKICWFLALAPHDPMQSSLLNATLEDKKLSEIPDFKMLLKQ 313

Query: 276 -VYLERI----LRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYTNISF 335
            V +E I    L     D F  E      +L       L   +IEHN+L  SK Y+ I+F
Sbjct: 314 IVTMEVIQWTSLWNKYKDEFENEKNMIGGSLGDKAGEDLKLRIIEHNILVVSKYYSRITF 373

Query: 336 EELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFE---DDIEELQQW 371
           + L  LL +   +AEK  S M+    +   ID+   II F+   D  E L  W
Sbjct: 374 KRLAELLCLTTEEAEKHLSEMVVSKALIAKIDRPSGIICFQIVKDSNEILNSW 411

[Close]

BLAST of Sed0001534 vs. TAIR 10
Match: AT5G64760.2 (regulatory particle non-ATPase subunit 5B )

HSP 1 Score: 55.8 bits (133), Expect = 8.9e-08
Identity = 87/353 (24.65%), Postives = 146/353 (41.36%), Query Frame = 0


Query: 36  QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGETQKEIAHYILAQIQPRVVSFEEQV 95
           QA ++ID TL  E  + + + L    A   GK+  E ++     +LA+I+       E  
Sbjct: 74  QAMQYIDQTLDIETRIELIKTLNNVAA---GKIYVEIERARLTKMLAKIKEEQGLIAEAA 133

Query: 96  LIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVN 155
            +++E   E + +  +  K A +L  + L    +    +  LS+ +   R++  D D   
Sbjct: 134 DLMQEVAVETFGAMAKTEKIAFILEQVRLCLDQKDFVRAQILSRKIN-PRVF--DADTTK 193

Query: 156 AEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYY-------DISQIEK 215
            +    +   +V  +  ++  L         L LKR + E  +RYY       +I +  K
Sbjct: 194 EKKKPKEGENMVEEAPADIPTL---------LVLKRIYYELMIRYYSHNNEYIEICRSYK 253

Query: 216 RQIGDEEIDEEALEQALSAAVTCTILAAA--GPQRSRVLATLYKDERCSKLKIYPILQK- 275
                  + E   +        C  LA A   P +S +L    +D++ S++  + +L K 
Sbjct: 254 AIYDIPSVKENPEQWIPVLRKICWFLALAPHDPMQSSLLNATLEDKKLSEIPDFKMLLKQ 313

Query: 276 -VYLERI----LRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSASKLYTNISF 335
            V +E I    L     D F  E      +L       L   +IEHN+L  SK Y+ I+F
Sbjct: 314 IVTMEVIQWTSLWNKYKDEFENEKNMIGGSLGDKAGEDLKLRIIEHNILVVSKYYSRITF 373

Query: 336 EELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFE---DDIEELQQW 371
           + L  LL +   +AEK  S M+    +   ID+   II F+   D  E L  W
Sbjct: 374 KRLAELLCLTTEEAEKHLSEMVVSKALIAKIDRPSGIICFQIVKDSNEILNSW 411

[Close]

BLAST of Sed0001534 vs. TAIR 10
Match: AT5G09900.1 (26S proteasome regulatory subunit, putative (RPN5) )

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 78/319 (24.45%), Postives = 142/319 (44.51%), Query Frame = 0


Query: 98  IREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAE 157
           + +KLA++ E + Q ++AA ++  + +++    + ++ +++  ++  RL L+  D V A+
Sbjct: 112 LTKKLAKIKEEQGQIAEAADLMQEVAVET-FGAMAKTEKIAFILEQVRLCLDRQDFVRAQ 171

Query: 158 AFINKASFLVSNS----------QHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ-- 217
               K +  V ++          + + +  +       +L+LKR + E  +RYY  +   
Sbjct: 172 ILSRKINPRVFDADTKKDKKKPKEGDNMVEEAPADIPTLLELKRIYYELMIRYYSHNNEY 231

Query: 218 IE----KRQIGDEEIDEEALEQ---ALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLK 277
           IE     + I D    +E  EQ    L       +LA   P +S +L    +D+  S++ 
Sbjct: 232 IEICRSYKAIYDIPSVKETPEQWIPVLRKICWFLVLAPHDPMQSSLLNATLEDKNLSEIP 291

Query: 278 IYPIL--QKVYLERI----LRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSAS 337
            + +L  Q V +E I    L     D F +E      +L       L   +IEHN+L  S
Sbjct: 292 DFKMLLKQVVTMEVIQWTSLWNKYKDEFEKEKSMIGGSLGDKAGEDLKLRIIEHNILVVS 351

Query: 338 KLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFE---DDIEELQQ 389
           K Y  I+ + L  LL +   +AEK  S M+    +   ID+   I+ F+   D  E L  
Sbjct: 352 KYYARITLKRLAELLCLSMEEAEKHLSEMVVSKALIAKIDRPSGIVCFQIAKDSNEILNS 411

[Close]

BLAST of Sed0001534 vs. TAIR 10
Match: AT5G09900.2 (26S proteasome regulatory subunit, putative (RPN5) )

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 78/319 (24.45%), Postives = 142/319 (44.51%), Query Frame = 0


Query: 98  IREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAE 157
           + +KLA++ E + Q ++AA ++  + +++    + ++ +++  ++  RL L+  D V A+
Sbjct: 112 LTKKLAKIKEEQGQIAEAADLMQEVAVET-FGAMAKTEKIAFILEQVRLCLDRQDFVRAQ 171

Query: 158 AFINKASFLVSNS----------QHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQ-- 217
               K +  V ++          + + +  +       +L+LKR + E  +RYY  +   
Sbjct: 172 ILSRKINPRVFDADTKKDKKKPKEGDNMVEEAPADIPTLLELKRIYYELMIRYYSHNNEY 231

Query: 218 IE----KRQIGDEEIDEEALEQ---ALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLK 277
           IE     + I D    +E  EQ    L       +LA   P +S +L    +D+  S++ 
Sbjct: 232 IEICRSYKAIYDIPSVKETPEQWIPVLRKICWFLVLAPHDPMQSSLLNATLEDKNLSEIP 291

Query: 278 IYPIL--QKVYLERI----LRKPEIDAFAEELKPHQQALLPDNFTVLDRAMIEHNLLSAS 337
            + +L  Q V +E I    L     D F +E      +L       L   +IEHN+L  S
Sbjct: 292 DFKMLLKQVVTMEVIQWTSLWNKYKDEFEKEKSMIGGSLGDKAGEDLKLRIIEHNILVVS 351

Query: 338 KLYTNISFEELGTLLGIPPHKAEKIASRMICEDRMRGSIDQIEAIIHFE---DDIEELQQ 389
           K Y  I+ + L  LL +   +AEK  S M+    +   ID+   I+ F+   D  E L  
Sbjct: 352 KYYARITLKRLAELLCLSMEEAEKHLSEMVVSKALIAKIDRPSGIVCFQIAKDSNEILNS 411

The following BLAST results are available for this feature:

BLAST of Sed0001534 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138952.1	4.6e-208	96.73	COP9 signalosome complex subunit 4 [Momordica charantia]	[more]
XP_004147790.1	6.1e-208	97.24	COP9 signalosome complex subunit 4 [Cucumis sativus] >XP_008466585.1 PREDICTED: ...	[more]
XP_022975496.1	1.8e-207	97.24	COP9 signalosome complex subunit 4 [Cucurbita maxima] >XP_023535953.1 COP9 signa...	[more]
XP_038905934.1	3.0e-207	96.98	COP9 signalosome complex subunit 4 [Benincasa hispida]	[more]
XP_022937018.1	1.5e-206	97.47	COP9 signalosome complex subunit 4 [Cucurbita moschata]	[more]

BLAST of Sed0001534 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L5U0	1.3e-181	83.42	COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CSN4 PE=1 ...	[more]
Q54B82	4.2e-95	50.53	COP9 signalosome complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=csn4 ...	[more]
Q68FS2	2.1e-94	52.16	COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 S...	[more]
Q3SZA0	2.7e-94	52.70	COP9 signalosome complex subunit 4 OS=Bos taurus OX=9913 GN=COPS4 PE=2 SV=1	[more]
Q6P0H6	3.6e-94	51.89	COP9 signalosome complex subunit 4 OS=Danio rerio OX=7955 GN=cops4 PE=2 SV=1	[more]

BLAST of Sed0001534 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCN1	2.2e-208	96.73	COP9 signalosome complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC11101000...	[more]
A0A5A7TJ03	2.9e-208	97.24	COP9 signalosome complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CRN4	2.9e-208	97.24	COP9 signalosome complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103503958 PE=4 ...	[more]
A0A6J1IEE2	8.5e-208	97.24	COP9 signalosome complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111474891 P...	[more]
A0A0A0LG28	8.5e-208	97.23	PCI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G855380 PE=4 SV...	[more]

BLAST of Sed0001534 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42970.1	9.4e-183	83.42	Proteasome component (PCI) domain protein	[more]
AT5G64760.1	8.9e-08	24.65	regulatory particle non-ATPase subunit 5B	[more]
AT5G64760.2	8.9e-08	24.65	regulatory particle non-ATPase subunit 5B	[more]
AT5G09900.1	1.2e-07	24.45	26S proteasome regulatory subunit, putative (RPN5)	[more]
AT5G09900.2	1.2e-07	24.45	26S proteasome regulatory subunit, putative (RPN5)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 294..377 e-value: 3.2E-15 score: 66.6
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 268..361 e-value: 1.9E-17 score: 63.7
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 192..365 score: 19.795897
None	No IPR available	SMART	SM00753	PINT	coord: 294..377 e-value: 3.2E-15 score: 66.6
None	No IPR available	PANTHER	PTHR10855:SF5	COP9 SIGNALOSOME COMPLEX SUBUNIT 4-LIKE	coord: 1..398
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 291..368 e-value: 1.2E-32 score: 113.4
IPR040134	26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4	PANTHER	PTHR10855	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4	coord: 1..398
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 292..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001534.1	Sed0001534.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity