Sed0001521 (gene) Chayote v1

Overview
NameSed0001521
Typegene
OrganismSechium edule (Chayote v1)
DescriptionProtein ELF4-LIKE
LocationLG08: 7578362 .. 7580688 (-)
RNA-Seq ExpressionSed0001521
SyntenySed0001521
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTCAATTCCTCTCTCAAGAATTTCAAAAAAAAAAAAAAAAAAAAAAAATCCTATCTGAAGGATTGGAGAGTGAGAGGGTAGGGGCCTGTTTGGGAGATTCGTTTGAAGCGGCGATCCCTTTTTTCTCTCTGGGTTTTTGTGTTTTTTTCCTTTTCCCCCTTTTCTTTTCACTGCTCCTCGTCCTTGGAAACCCCTCTTCTTTGTAAGGTCTCTTCATTTCAATCCCTCTGTATTCTTCTCTCCATCTATGATGTTCCAGATTTTCAAGGTACTTACTATTTACCACTCTCCCTGTACGATTGATTACATAAAGCAATGACTAATCATCATCAATCCATTATTATTTGCCTCTTTCTTGCTTTGTTTTTCCCTTTTCTTTTCATTTGGGACTTCCCCTTTTCAGGCTTTTGTGTTTGGTGGTATCTGATTCACCGATGTTCTGATTTGCTTTTGGAATTTGTGTTGTAATTTGACGTTTCTGGCTTATGGGTTGTGATTTTTTAACTGAATTGGTATCTGGGTTGTGATTGTTTGCAGGAGATTTCTGTGTTTTTTTTTTAATGAGTGTTGTAATTTGACGTTTCTGGCTTCTGGGTTGTGTTTATTGTTCTGTATTGGTATCTGGGTAGTTGATTGTTTGCAGGGGATTTGTGTTTGGTGTTGTTGAAAATTGCAATTGGGGTTCGAGTTTGTGTACATATTATGAATTTTGGGAGTTTGGAGAGTACTAAATCTGTAAATCCTTCCCAATCTCGAGATGGGTGTGAGCGAATTGGGGTTTGTTTGTTTAATTTGTTGATGAGTTTTAGGTTGAGTATGTGTTTGAGAGGATCCATAATGTTGTCTCTCTTTTGAGGAGCTCTCATGGGCTTATATTTCTGCATCATTGACTGATATTTTGGGTCTTTGGAATACTTGTTTGGAACTCTGAGCCTTAGGTGGGTGTGGGTGTTCTCTGAGCACATTCAAAAAAGGTTCCCTTTTAAGGAAATGCTTCTGCCTTTTCTCTATCTCATCATAAATCAATTTTAAAAAGAATTATATACACTCCATCTTTGTTATCTGACTCCTCTGTTTAAAACTGGATTGTGGTGCTCATGATTCCTTTCTACAGTTTTTGTCTCATGTGCTTAAATTTCTAATTAACAAAAAAGAAAAAGGAAAAAGAGAGCAACTATCTTACAAAATACCAAATGTTTCTGGTTTCTCCATCTCAAAATAATTTGGTGATAAGATAATTCACCCATCTTAGTTCGCTTTGGAGGTGTCACTTTAGGATAATTAATTTTGAATTGGATCCTAATTTTTTTTATATTAGATCGAATACTCCTTTGTGTTTTAATAGATTATGATAATATATTAGATAGGGTAAGATTCTATTTCAAAATCATTTTGGTAATGAGGAGAGTGGTTCATCTATCTTATAAATGCGCTAATAGTCCTCACTCTTTCTGGGATCTCGAGCACAGAATTACAAAGAGCCATTTTCTCTTTTGCATGATCTTCTTGTTCTTGTAAGTTCTTCATTTTGTTCTTCCATTTTCTGTTTCAGAGAGGGAGCTGATTTGATAGAATTCTCATCTGTAAAAGCATGGAGGGTGACACATTTTCTGGGATTGGGAGTAGTGCACAGATAGATGGCAGGGTTTTACAGACATTTCAAAAGAATTTTGTTCAAGTCCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAGTCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGAGCTTTTAAATCGGATGGAAAAGCAGGCCTGAAGAGAAACAGAGCTGCATAATCCACAAATTTCATCTTTCTCCATTCTTTTGGATCTGTGGGAGACAAGGAAAAAGCATTTCTCATCTCTGTCTAAAACAAGGCTGGTATATCAACAGATCTCTGTAACTTTCTTGTATTATTTTTAACTATCTAGTTTTACATTTACTTAGTTCTTCATTATCCCCTCTTTTTTTGCTAATTGGAGAGAAATAATTGTCCTGATTCTGTATTGAACTGCTTTCCTGCCTAACTGTGGACCGACTTGACCAAACTAAGCATCAAATTATCATCTGATTCCTGGTTTTGCTTCCAATTTGTATGCACTGTACTTGAAAGAATCTTGGGGTAGGTCTGATCACACTTGTTTCCTGTTTTAGTGATATATCTATTACTCATTTCCTGTTTTA

mRNA sequence

TCTTTCAATTCCTCTCTCAAGAATTTCAAAAAAAAAAAAAAAAAAAAAAAATCCTATCTGAAGGATTGGAGAGTGAGAGGGTAGGGGCCTGTTTGGGAGATTCGTTTGAAGCGGCGATCCCTTTTTTCTCTCTGGGTTTTTGTGTTTTTTTCCTTTTCCCCCTTTTCTTTTCACTGCTCCTCGTCCTTGGAAACCCCTCTTCTTTGTAAGGTCTCTTCATTTCAATCCCTCTGTATTCTTCTCTCCATCTATGATGTTCCAGATTTTCAAGAGAGGGAGCTGATTTGATAGAATTCTCATCTGTAAAAGCATGGAGGGTGACACATTTTCTGGGATTGGGAGTAGTGCACAGATAGATGGCAGGGTTTTACAGACATTTCAAAAGAATTTTGTTCAAGTCCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAGTCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGAGCTTTTAAATCGGATGGAAAAGCAGGCCTGAAGAGAAACAGAGCTGCATAATCCACAAATTTCATCTTTCTCCATTCTTTTGGATCTGTGGGAGACAAGGAAAAAGCATTTCTCATCTCTGTCTAAAACAAGGCTGGTATATCAACAGATCTCTGTAACTTTCTTGTATTATTTTTAACTATCTAGTTTTACATTTACTTAGTTCTTCATTATCCCCTCTTTTTTTGCTAATTGGAGAGAAATAATTGTCCTGATTCTGTATTGAACTGCTTTCCTGCCTAACTGTGGACCGACTTGACCAAACTAAGCATCAAATTATCATCTGATTCCTGGTTTTGCTTCCAATTTGTATGCACTGTACTTGAAAGAATCTTGGGGTAGGTCTGATCACACTTGTTTCCTGTTTTAGTGATATATCTATTACTCATTTCCTGTTTTA

Coding sequence (CDS)

ATGGAGGGTGACACATTTTCTGGGATTGGGAGTAGTGCACAGATAGATGGCAGGGTTTTACAGACATTTCAAAAGAATTTTGTTCAAGTCCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAGTCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGAGCTTTTAAATCGGATGGAAAAGCAGGCCTGAAGAGAAACAGAGCTGCATAA

Protein sequence

MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA
Homology
[Close]
BLAST of Sed0001521 vs. NCBI nr
Match: XP_022961237.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961239.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022987288.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987289.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987290.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023516901.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516902.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516903.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6590027.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023688.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.6 bits (527), Expect = 5.7e-50
Identity = 108/114 (94.74%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. NCBI nr
Match: XP_004144022.1 (protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450909.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450910.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_011660014.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736193.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736194.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_038878351.1 protein ELF4-LIKE 4 [Benincasa hispida] >XP_038878352.1 protein ELF4-LIKE 4 [Benincasa hispida] >KAA0055791.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa] >KGN66281.1 hypothetical protein Csa_007334 [Cucumis sativus] >TYK10042.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. NCBI nr
Match: XP_022933909.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933911.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022968596.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968604.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968613.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023529215.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023529216.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6588067.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-49
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGIGS+AQID ++LQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRA 114
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRA 113

[Close]
BLAST of Sed0001521 vs. NCBI nr
Match: KAG7021961.1 (Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-49
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGIGS+AQID ++LQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRA 114
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRA 113

[Close]
BLAST of Sed0001521 vs. NCBI nr
Match: XP_022147541.1 (protein ELF4-LIKE 4 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46
Identity = 101/112 (90.18%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GS AQIDG++LQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGA KSDGKAG KRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRA 114
           GLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  KSDGKA  KR R+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRS 113

[Close]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-34
Identity = 75/106 (70.75%), Postives = 88/106 (83.02%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD +SG G   Q+DG++LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKA 107
           GLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G  KSDGKA
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKA 110

[Close]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.7e-34
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GS  Q+DG++LQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61 VGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS 98
          VGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Sbjct: 61 VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 16  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVD 75
           D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 76  LYADLSCSFTRSMEVSSEGDSSG 99
           +Y+DL+ SF+        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

[Close]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 0 

Query: 2   EGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVG 61
           E D      S+A  D  V  T    F + Q  LDQN+ LI  +N+NH S+IPDN++RNVG
Sbjct: 20  ENDGEDVAASAAVEDVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVG 79

Query: 62  LIRELNNNIRRVVDLYADLSCSFTRSME----VSSEGDSS 98
           LI E+N NI +V+++Y+DLS +F +  +     + +GD++
Sbjct: 80  LINEINGNISQVMEIYSDLSLNFAKKFDQRRRTTKDGDTT 119

[Close]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match: A0A6J1JGF0 (protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 108/114 (94.74%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match: A0A6J1H9N1 (protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 108/114 (94.74%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match: A0A1S3BQA6 (protein ELF4-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103492357 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.1e-50
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match: A0A5D3CFE9 (Protein ELF4-LIKE 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001750 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.1e-50
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match: A0A0A0M235 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G595850 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.1e-50
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRAA 115
           GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA KSDGKAG KRNRAA
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAA 114

[Close]
BLAST of Sed0001521 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-37
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRA 114
           GLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  KSDGKA  KR R+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRS 113

[Close]
BLAST of Sed0001521 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-37
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKRNRA 114
           GLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  KSDGKA  KR R+
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRS 113

[Close]
BLAST of Sed0001521 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35
Identity = 75/106 (70.75%), Postives = 88/106 (83.02%), Query Frame = 0 

Query: 1   MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD +SG G   Q+DG++LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKA 107
           GLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G  KSDGKA
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKA 110

[Close]
BLAST of Sed0001521 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 144.4 bits (363), Expect = 5.5e-35
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GS  Q+DG++LQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61 VGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS 98
          VGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Sbjct: 61 VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]
BLAST of Sed0001521 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 16  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVD 75
           D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 76  LYADLSCSFTRSMEVSSEGDSSG 99
           +Y+DL+ SF+        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

The following BLAST results are available for this feature:
BLAST of Sed0001521 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961237.15.7e-5094.74protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE ... [more]
XP_004144022.11.3e-4993.86protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LI... [more]
XP_022933909.14.8e-4993.81protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE ... [more]
KAG7021961.14.8e-4993.81Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022147541.12.9e-4690.18protein ELF4-LIKE 4 [Momordica charantia][more]
BLAST of Sed0001521 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q570U62.8e-3669.91Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1[more]
Q94BS82.0e-3470.75Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1[more]
Q8S8F57.7e-3475.51Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1[more]
O042111.5e-1342.17Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1[more]
O808772.6e-1341.00Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1[more]
BLAST of Sed0001521 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JGF02.7e-5094.74protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1[more]
A0A6J1H9N12.7e-5094.74protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1[more]
A0A1S3BQA66.1e-5093.86protein ELF4-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103492357 PE=3 SV=1[more]
A0A5D3CFE96.1e-5093.86Protein ELF4-LIKE 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A0A0M2356.1e-5093.86Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G595850 PE=3 S... [more]
BLAST of Sed0001521 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G17455.12.0e-3769.91ELF4-like 4 [more]
AT1G17455.22.0e-3769.91ELF4-like 4 [more]
AT1G72630.11.4e-3570.75ELF4-like 2 [more]
AT2G06255.15.5e-3575.51ELF4-like 3 [more]
AT2G40080.11.1e-1442.17Protein of unknown function (DUF1313) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009741Protein EARLY FLOWERING 4 domainPFAMPF07011Elf4coord: 14..95
e-value: 1.8E-39
score: 133.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..114
NoneNo IPR availablePANTHERPTHR33469:SF16PROTEIN ELF4-LIKE 3coord: 1..113
IPR040462Protein EARLY FLOWERING 4PANTHERPTHR33469PROTEIN ELF4-LIKE 4coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001521.1Sed0001521.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0042753 positive regulation of circadian rhythm
cellular_component GO:0005634 nucleus