Sed0001468 (gene) Chayote v1

Overview
NameSed0001468
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG12: 1649238 .. 1652539 (+)
RNA-Seq ExpressionSed0001468
SyntenySed0001468
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAATTCTAGTATATAAAAACGAAGAAATCAAACAAAACAAGAAAGGGCAAAAACGTAATTTAACAAAAACTTATCGAGAAAGTGCAAATCACAGAGCTCGCGTACAGCAACGAACATCTCGACGACGATGCTTCTCCAAACTTCCGTTCATCGCCGCACAGTATCTCTCTCATCGTCAACCTCATATGCTCATCCATTCCTGCCTGCAGTTCAATCTCAGCCCATTCGCCAAAACCCGAATCATCGAAGCCTTCAACTCTGTGTAACCTGCTCCATTTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGCGGAGGCCTGTGGTGAAATGGAACGATATGTACAGGGGGATATCGCTGATGGAGAATCCCGAGCTAGGCTCTGCGAGTTTGCTGAACCGGTGGGAGAATGAGGGCAAGAAGCTTTCGAAATGGGAGCTTTCTCGAGTTGTTAAGGAGTTGAGGAAGTACAAGCGATATGAGAGGGCTTTGGAGGTAAAGTATAGGATTTTTTTTGGTGATTTTTTGATTTTCTGATGGGTTTTTGTTGGTGTATGTATTGGAGTTTATGAATTGGTTCGATTCGGTTGTGAATTTTGATGTTCGATTCGTTTTTTATTCCATTAATTTAGTAAGATATTAATGTCTATTTTTATTGTGTTTGTTTCTGGGAGTAAAGAGTGGAGTGGAAAAGAATTAAGTGGTTAATAATAGTTTAGAGTGGTTAACTACTAGTTTGGGGATTCAGGTTAATAATAGTGGAGTAATCAACTTGTTTGAAGATTGGGGTTAGTAGTGGTTGAATGATAGATTTGATGTAAAGTTTAATAAAATTTAATTTGAGATTTGATAAAGGAGTTGAAGAGGGGTTAAACAGTGATCAACAGTGATTGTTTATTACAAAAAACAAACGAGGGGTTTTTGAGGAGTGGTTATGTCCAAAAAAACAAATGCACCCTAGGTTTCTGTTATTTATTTATTTTTTAGTTTCACTCCAATGTACCCAGGGTATACATGTCCATCACGGACCCGAAAGTTAACAATAAAACTCACTTGTGGGTCTCGAACATGAGACTTGCAAAGAACCATGTCTCGAAAGCCCCAAGCTTCAACCAACACGGATGCCATTCGGGGATATATAGGTTTCTGTTAACTGATGTTTAGCTACCTGCCTTGCTTCTTTAGTAAGCATAACTCAATTAGCTAAAGTATATATACTCAATTAAAAGGTCAGACGTTCGAATAACCACTATGAAATATCATTGAACTTAGAAAAAAAAGTTTCTCTTCATCATAAAGCATGCTAACTTTGTATGAGTCATAATATAGACTTTGTCGATACTTTTCTGTTCGTTAATTGGGTAGCAATGATGCATTTCATTGAAGAACGTTTGATATCAACTTCTGAACATTTCCCTTTTTAGCTTTATTATATTCCTAACTCTTTGTTTATGATTGTTAAGGCCCCGTGTGATAACCATTTCGTGTTTTTGTTTTTGTTTTTAATATGTTTTCATCATTTAGCTGGGCTTGATGCTGGTTTATTGCTTTCAAACGGGGTGAGGACCGTTGTCCAATAATCTTACACCTGTAAATAATTTGTCTGTTAAAACATATGATGTCGGTCTTATAATTTGAGTCTGGTCGTATGATATTTTCTCAACTTCAAAATGATGGTGTGCAATAGTTCTGAATTTTGTAATTTGTTGCTTGATGGTATAAGATGTAGATTGTTGTAGCTGTTTAGACTCTAAAATATAATTCCTTTTGTAGATATATGATTGGATGAGCAATCGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCAATACAATTGGATCTTATATCGAAAGTCCGCGGCATTACGAGTGTTGAAGACTACTTCCTAAGGCTGCCAGATAATTTGAAGGACAGGAGATTATATGGGGCTCTTCTGAATGCCTATGTGAAAACAAGACAGAGAGAAAAGGCAGAAACTTTACTTGAGAAAATGAGAACTAAAGGTTTCGCGACTCACCCGCTTCCCTTCAATGTAATGATGACTCTCTACATGAACTTTAAAGAGTACAAGAAAGTCGAGTCGTTAGTATCGGAAATGATAGAAAAGAGCATTCAGCTTGACATATACTCGTATAATATTTGGCTATCATCTTGTGGATTACAAGGATCTACTGAGAAGATGGAAAAAGTGTATGAACAGATGAAACAAGATAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCCACAATGTACATTAAGATGGGACTGATCGAAAAAGCCGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTAGGCCGGGATCGAATACCCTATCATTATCTGATTAGTTTGTATGGTAGTGCCGGTAACAAAGAAGAAACTTATCGAGTGTGGAACATTTACAAAACCGTTTTCCCCACCGTTCCGAATTTGGGATACCATGCTATAATCTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGGGCTGAAAAAATTTATGAGGAATGGTTATCCGTTAAGATGACGTACGACCCTAGAATCACTAATCTTTTTATTGGGTGGTATGTTAAGGAAGGAAATGTGAGCAAAGCTGAGAGCTTCTTTGATCACTTGGTTGAAGTAGGGGGGAAGCCAAATTCGAGTACGTGGGAGACTCTCGCCGATGGGCATGAGAAAGAGGGTCGGGTTTCAGAGGCTTTAGCTAGTTGGAATGAAGCCTTTTCTGCTGAGGGTTCCAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTTGATCTGTGTGAGAAAGAAGGCCACAATGCCAGCAAGGATGTTCTAGTTGGATTGCTGAAGCAATCCAAATATCTCCAAGACAAATCATATGCATCGCTCATCGGTTTGTCAGATGAGACAATCGATAACGATGTGGTTTCGGTGAAAGGTAGCAGTATTGACGATGAAAGTGATAAAACCGAGTTGGAGTCTGACGATTCTGAGATGCTTCTCAACTTGTGATATTCAATGACATTGTCATCTATGGTTTCTGGAATTCGTAATCAGAAGTTTGAAACATATTTTATTATGTGCGTGCGGTCTCGGTCTCGGTCCGGACAGATGAGATTTATTTCTGTTACAGTTGCAGCCATCTCTGTCTCTTCTGTAGAATTAGATCTTTCTATGTATTTCTACTGTAATTTTCCCTGATAGAAATCTTTGCATATACTAAATAGAGTGAAATTTTGGTGCAATTTCTTCATGGCCGTCGATTTATAATTTCTTAAGCATGATTTAATAAA

mRNA sequence

TAAAATTCTAGTATATAAAAACGAAGAAATCAAACAAAACAAGAAAGGGCAAAAACGTAATTTAACAAAAACTTATCGAGAAAGTGCAAATCACAGAGCTCGCGTACAGCAACGAACATCTCGACGACGATGCTTCTCCAAACTTCCGTTCATCGCCGCACAGTATCTCTCTCATCGTCAACCTCATATGCTCATCCATTCCTGCCTGCAGTTCAATCTCAGCCCATTCGCCAAAACCCGAATCATCGAAGCCTTCAACTCTGTGTAACCTGCTCCATTTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGCGGAGGCCTGTGGTGAAATGGAACGATATGTACAGGGGGATATCGCTGATGGAGAATCCCGAGCTAGGCTCTGCGAGTTTGCTGAACCGGTGGGAGAATGAGGGCAAGAAGCTTTCGAAATGGGAGCTTTCTCGAGTTGTTAAGGAGTTGAGGAAGTACAAGCGATATGAGAGGGCTTTGGAGATATATGATTGGATGAGCAATCGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCAATACAATTGGATCTTATATCGAAAGTCCGCGGCATTACGAGTGTTGAAGACTACTTCCTAAGGCTGCCAGATAATTTGAAGGACAGGAGATTATATGGGGCTCTTCTGAATGCCTATGTGAAAACAAGACAGAGAGAAAAGGCAGAAACTTTACTTGAGAAAATGAGAACTAAAGGTTTCGCGACTCACCCGCTTCCCTTCAATGTAATGATGACTCTCTACATGAACTTTAAAGAGTACAAGAAAGTCGAGTCGTTAGTATCGGAAATGATAGAAAAGAGCATTCAGCTTGACATATACTCGTATAATATTTGGCTATCATCTTGTGGATTACAAGGATCTACTGAGAAGATGGAAAAAGTGTATGAACAGATGAAACAAGATAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCCACAATGTACATTAAGATGGGACTGATCGAAAAAGCCGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTAGGCCGGGATCGAATACCCTATCATTATCTGATTAGTTTGTATGGTAGTGCCGGTAACAAAGAAGAAACTTATCGAGTGTGGAACATTTACAAAACCGTTTTCCCCACCGTTCCGAATTTGGGATACCATGCTATAATCTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGGGCTGAAAAAATTTATGAGGAATGGTTATCCGTTAAGATGACGTACGACCCTAGAATCACTAATCTTTTTATTGGGTGGTATGTTAAGGAAGGAAATGTGAGCAAAGCTGAGAGCTTCTTTGATCACTTGGTTGAAGTAGGGGGGAAGCCAAATTCGAGTACGTGGGAGACTCTCGCCGATGGGCATGAGAAAGAGGGTCGGGTTTCAGAGGCTTTAGCTAGTTGGAATGAAGCCTTTTCTGCTGAGGGTTCCAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTTGATCTGTGTGAGAAAGAAGGCCACAATGCCAGCAAGGATGTTCTAGTTGGATTGCTGAAGCAATCCAAATATCTCCAAGACAAATCATATGCATCGCTCATCGGTTTGTCAGATGAGACAATCGATAACGATGTGGTTTCGGTGAAAGGTAGCAGTATTGACGATGAAAGTGATAAAACCGAGTTGGAGTCTGACGATTCTGAGATGCTTCTCAACTTGTGATATTCAATGACATTGTCATCTATGGTTTCTGGAATTCGTAATCAGAAGTTTGAAACATATTTTATTATGTGCGTGCGGTCTCGGTCTCGGTCCGGACAGATGAGATTTATTTCTGTTACAGTTGCAGCCATCTCTGTCTCTTCTGTAGAATTAGATCTTTCTATGTATTTCTACTGTAATTTTCCCTGATAGAAATCTTTGCATATACTAAATAGAGTGAAATTTTGGTGCAATTTCTTCATGGCCGTCGATTTATAATTTCTTAAGCATGATTTAATAAA

Coding sequence (CDS)

ATGCTTCTCCAAACTTCCGTTCATCGCCGCACAGTATCTCTCTCATCGTCAACCTCATATGCTCATCCATTCCTGCCTGCAGTTCAATCTCAGCCCATTCGCCAAAACCCGAATCATCGAAGCCTTCAACTCTGTGTAACCTGCTCCATTTCCCAAGTCCATAGCTATGGAACCGTGGACTTCGAGCGGAGGCCTGTGGTGAAATGGAACGATATGTACAGGGGGATATCGCTGATGGAGAATCCCGAGCTAGGCTCTGCGAGTTTGCTGAACCGGTGGGAGAATGAGGGCAAGAAGCTTTCGAAATGGGAGCTTTCTCGAGTTGTTAAGGAGTTGAGGAAGTACAAGCGATATGAGAGGGCTTTGGAGATATATGATTGGATGAGCAATCGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCAATACAATTGGATCTTATATCGAAAGTCCGCGGCATTACGAGTGTTGAAGACTACTTCCTAAGGCTGCCAGATAATTTGAAGGACAGGAGATTATATGGGGCTCTTCTGAATGCCTATGTGAAAACAAGACAGAGAGAAAAGGCAGAAACTTTACTTGAGAAAATGAGAACTAAAGGTTTCGCGACTCACCCGCTTCCCTTCAATGTAATGATGACTCTCTACATGAACTTTAAAGAGTACAAGAAAGTCGAGTCGTTAGTATCGGAAATGATAGAAAAGAGCATTCAGCTTGACATATACTCGTATAATATTTGGCTATCATCTTGTGGATTACAAGGATCTACTGAGAAGATGGAAAAAGTGTATGAACAGATGAAACAAGATAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCCACAATGTACATTAAGATGGGACTGATCGAAAAAGCCGAAGAATGCTTGAGGAGGGTCGAAAGTAGAATTGTAGGCCGGGATCGAATACCCTATCATTATCTGATTAGTTTGTATGGTAGTGCCGGTAACAAAGAAGAAACTTATCGAGTGTGGAACATTTACAAAACCGTTTTCCCCACCGTTCCGAATTTGGGATACCATGCTATAATCTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGGGCTGAAAAAATTTATGAGGAATGGTTATCCGTTAAGATGACGTACGACCCTAGAATCACTAATCTTTTTATTGGGTGGTATGTTAAGGAAGGAAATGTGAGCAAAGCTGAGAGCTTCTTTGATCACTTGGTTGAAGTAGGGGGGAAGCCAAATTCGAGTACGTGGGAGACTCTCGCCGATGGGCATGAGAAAGAGGGTCGGGTTTCAGAGGCTTTAGCTAGTTGGAATGAAGCCTTTTCTGCTGAGGGTTCCAAGAGTTGGAGGCCAAAGCCCTATAATGTGTTGGCTTACTTTGATCTGTGTGAGAAAGAAGGCCACAATGCCAGCAAGGATGTTCTAGTTGGATTGCTGAAGCAATCCAAATATCTCCAAGACAAATCATATGCATCGCTCATCGGTTTGTCAGATGAGACAATCGATAACGATGTGGTTTCGGTGAAAGGTAGCAGTATTGACGATGAAAGTGATAAAACCGAGTTGGAGTCTGACGATTCTGAGATGCTTCTCAACTTGTGA

Protein sequence

MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVDFERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLVGLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL
Homology
BLAST of Sed0001468 vs. NCBI nr
Match: XP_038903663.1 (pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida])

HSP 1 Score: 944.5 bits (2440), Expect = 4.0e-271
Identity = 473/537 (88.08%), Postives = 495/537 (92.18%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSLSSS SY+    P +QS+  RQN N+R L L V CSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSRKLPPLIQSEAFRQNVNYRRLPLSVNCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGKKL+KWELSRVVKELRKYKR+E 
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFEM 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYVK R REKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KVESLVSEM EKSIQL
Sbjct: 181 AYVKARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGSTEKME+VYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGS GNKEETYRVW IYKTVFPT+PNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWTIYKTVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKEG VSKAESFFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGTVSKAESFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADGH KEGRVS+ALASW EAFSAEGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           GLL+QSKYLQDKSY SLIGLSDETIDNDVV  K S+ID+E DKTE ESDDSEMLL L
Sbjct: 481 GLLRQSKYLQDKSYVSLIGLSDETIDNDVVLEKDSNIDEEIDKTEFESDDSEMLLKL 537

BLAST of Sed0001468 vs. NCBI nr
Match: XP_008438222.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] >KAA0049070.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17492.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 939.5 bits (2427), Expect = 1.3e-269
Identity = 467/537 (86.96%), Postives = 494/537 (91.99%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSL SS SY+  FLP +QSQP   N N+R L+L VTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGK L+KWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AY K RQREKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KV+SLVSEM EKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGST+KME+VYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LR+VESRIVGRDRIPYHYLISLYGS GNKEE YRVWNIYK VFPT+PNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKE N+SKAE FFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADGH KEGRVS+ALASW EAFS+EGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           G L+Q KYLQDKSYASLIGL DETIDND VS KGSSI+DE DKTE ESDDSEMLL L
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

BLAST of Sed0001468 vs. NCBI nr
Match: XP_022147061.1 (pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia])

HSP 1 Score: 931.4 bits (2406), Expect = 3.5e-267
Identity = 465/537 (86.59%), Postives = 492/537 (91.62%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSLSSS SY+      + +Q  R+N N R L L VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGKKL+KWELSRVVKELRKYKRYER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITS EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYV+ R REKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KVESLVSEM EK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGSTE MEKVYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGS GNK+ETYRVWNIYKTVFPT+PNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           +GDVEGAEKIYEEWLSVK TYDPRI NLFIGWYVKEGNVSKAESFFDH+VEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WETLADGH KEGRVS+A+ASW EAFSAEGSKSWRPKPYNVLAYFDLCEKEG   SK+VLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
            LL+QSKYLQDKSYASLIGLS++T+D+ VVS  GSSIDDE D TE ESDDSE+LL L
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

BLAST of Sed0001468 vs. NCBI nr
Match: XP_004133941.1 (pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN56639.1 hypothetical protein Csa_010401 [Cucumis sativus])

HSP 1 Score: 926.8 bits (2394), Expect = 8.6e-266
Identity = 462/537 (86.03%), Postives = 489/537 (91.06%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSL S  SY+  FLP +QSQP   N N+R L L VTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+ KWN +YR ISLMENPELGSAS+LN+WENEGK ++KWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S E+YFLRLP++LKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AY K RQREKAE LLEKMRTKGF THPLPFNVMMTLYMN KEY+KVESLVSEM E SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGSTEKME+VYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGS GNKEE YRVWNIYK VFPT+PNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKEGN SKAESFFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE L D H KEGRVS+ALASW EAFSAEGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           GLL+Q KYLQDK+YASLIGL DETIDN+ VS KGS+I+DE DKTE ESDDSEM L L
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of Sed0001468 vs. NCBI nr
Match: XP_022974155.1 (pentatricopeptide repeat-containing protein At1g02150 [Cucurbita maxima])

HSP 1 Score: 874.0 bits (2257), Expect = 6.6e-250
Identity = 433/537 (80.63%), Postives = 479/537 (89.20%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH   VSLSSSTSY+H   P +QSQ   +N N+R L L +TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGKK++KWE+ RV+KELRKY+RYER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI S EDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYVK RQREKAETLL KMRTKG+A H L FNVMMTLY+NFKEY+KVESLVSEMIEK I+L
Sbjct: 181 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIW+SS GLQGS EKME+VYE+MKQDRTINANWTTFSTMATMYIK GLIEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIP+HYL+SLYGS GNKEETYRVW +YKT+FPT+PNLG+HAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
            GD+EGAEKIYEEWLSVK  YDPRI NLF+GWYVKEG  SKAESFF+H+VE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADG  KEGRVS+ALASW EAFSAEGS++WRPK + VLA+F+LCEKEG  ASK+VLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           GLL+QSK LQDK+Y SLIGLSDETIDNDVVS +GS+IDDESDKT  ESDDSEMLL +
Sbjct: 481 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 537

BLAST of Sed0001468 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 642.5 bits (1656), Expect = 4.2e-183
Identity = 320/530 (60.38%), Postives = 405/530 (76.42%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQ +V  R V L+SS SY+   L   +S P+            + CSISQV+ YGTVD
Sbjct: 1   MLLQAAVQNRNVPLASSASYSR--LLRCRS-PVVSVAALSKKTAAIVCSISQVYGYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           +ERRP+V+WN +Y+ ISLME PELG+AS+LN+WE  G+KL+KWEL RVVKELRKYKR  +
Sbjct: 61  YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI   E++FL+LP+N KDRR+YG+LLN
Sbjct: 121 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYV+ + REKAE LL  MR KG+A HPLPFNVMMTLYMN +EY KV+++V EM +K I+L
Sbjct: 181 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKAE+ 
Sbjct: 241 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LR+VE+RI GR+RIPYHYL+SLYGS GNK+E YRVW++YK+V P++PNLGYHA++S+L+R
Sbjct: 301 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           +GD+EGAEK+YEEWL VK +YDPRI NL +  YVK   +  AE  FDH+VE+GGKP+SST
Sbjct: 361 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LA GH ++  +SEAL     AFSAEGS +WRPK   +  +F LCE+E    SK+ ++
Sbjct: 421 WEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVL 480

Query: 481 GLLKQSKYLQDKSYASLIGLSD-ETIDNDVVSVKGSSIDDESDKTELESD 530
            LL+QS  L+DKSY +LI + +  T++N  +       + ++  T+L+ D
Sbjct: 481 ELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAH----ETDALLTQLQDD 523

BLAST of Sed0001468 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.5e-68
Identity = 153/449 (34.08%), Postives = 248/449 (55.23%), Query Frame = 0

Query: 65  PVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYERALEI 124
           P+  ++ + R ++   +P      +L+ W ++G  +   EL  ++K LRK+ R+  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 125 YDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVK 184
            DWMS       ++  D AI+LDLI+KV G+   E +F  +P   ++  LYGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 185 TRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYS 244
            +   KAE + ++M+  GF    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 245 YNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 304
            N  L +  +    E MEK   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 305 ESRIVGRDR-IPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIRVGD 364
           E  +  + R   Y  L+S YG+AG KEE YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 365 VEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWET 424
           +E  EKI EEW +    +D RI +L I  Y K+G + KAE   + LV+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 425 LADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLVGLL 484
           LA G++  G++ +A+  W  A        WRP    +++  D  E +        ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 452

Query: 485 KQSKYLQDKSYASLI------GLSDETID 507
            +  ++   SY  L+      GLS + +D
Sbjct: 453 SERGHI---SYDQLLYDMNGAGLSWKIVD 475

BLAST of Sed0001468 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-67
Identity = 142/396 (35.86%), Postives = 223/396 (56.31%), Query Frame = 0

Query: 90  LNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           LN++    K + KWE+   +K+LR    Y  AL++ + M   E     T SD AI LDL+
Sbjct: 43  LNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--EERGMNKTVSDQAIHLDLV 102

Query: 150 SKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVKTRQREKAETLLEKMRTKGFATHPLP 209
           +K R IT+ E+YF+ LP+  K    YG+LLN Y K    EKAE LL KM+        + 
Sbjct: 103 AKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMS 162

Query: 210 FNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGSTEKMEKVYEQMK 269
           +N +MTLY    E +KV +++ E+  +++  D Y+YN+W+ +         +E+V E+M 
Sbjct: 163 YNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMN 222

Query: 270 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSAGNK 329
           +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   RD   Y +LI+LYG  G  
Sbjct: 223 RDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 282

Query: 330 EETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSVKMTYDPRITNLF 389
            E YR+W   +   P   N+ Y  +I  L+++ D+ GAE +++EW +   TYD RI N+ 
Sbjct: 283 TEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVL 342

Query: 390 IGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEALASWNEAFS--- 449
           IG Y +EG + KA    +     GGK N+ TWE   D + K G ++ AL   ++A S   
Sbjct: 343 IGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGK 402

Query: 450 AEGSKSWRPKPYNV---LAYFDLCEKEGHNASKDVL 480
            +G K W P P  V   ++YF+  +K+  N ++++L
Sbjct: 403 GDGGK-WLPSPETVRALMSYFE--QKKDVNGAENLL 433

BLAST of Sed0001468 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-66
Identity = 140/409 (34.23%), Postives = 239/409 (58.44%), Query Frame = 0

Query: 90  LNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           + +W+ EG  + K+EL+R+V+ELRK KRY+ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 150 SKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVKTRQREKAETLLEKMRTKGFATHPLP 209
           SK+RG+ S E +F  +PD ++      +LL++YV+ +  +KAE L EKM   GF    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 210 FNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGSTEKMEKVYEQMK 269
           +N M+++Y++  +++KV  L+ E+  ++   DI +YN+WL++       E  EKVY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 270 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSAGNK 329
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ + G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 330 EETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSVKMTYDPRITNLF 389
           +     W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW SV  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 390 IGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEALASWNEAFSAEG 449
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   + + L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 450 SKSWRPKPYNVLAYFDLCEKEGHNASKDVLVGLLKQSKYLQDKSYASLI 499
            K W      V       E++G+    + L+ LL+++ Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

BLAST of Sed0001468 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.5e-66
Identity = 139/393 (35.37%), Postives = 219/393 (55.73%), Query Frame = 0

Query: 82  PELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSD 141
           P     SLL    + G  +S  EL  + K L +  RY+ AL++ +WM N+++    +  D
Sbjct: 50  PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD-IEFSVYD 109

Query: 142 AAIQLDLISKVRGITSVEDYFLRLPDNLKDRRL----YGALLNAYVKTRQREKAETLLEK 201
            A++LDLI K  G+   E+YF +L  +    R+    Y  LL AYVK +  ++AE L+EK
Sbjct: 110 IALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEK 169

Query: 202 MRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGS 261
           +   GF   P PFN MM LY    +Y+KV  +VS M    I  ++ SYN+W+++C     
Sbjct: 170 LNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSG 229

Query: 262 TEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYH 321
              +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  +   +R+ Y 
Sbjct: 230 VAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYF 289

Query: 322 YLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSV 381
           +LI+LY S GNKE   R+W + K+V   +  + Y  ++S+L++ GD+E AE+++ EW + 
Sbjct: 290 FLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQ 349

Query: 382 KMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEA 441
              YD R++N+ +G YV+ G + KAES    ++E GG PN  TWE L +G  K   + +A
Sbjct: 350 CFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKA 409

Query: 442 LASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKE 471
           + + ++ F       WRP    V+A  +  EKE
Sbjct: 410 IDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKE 441

BLAST of Sed0001468 vs. ExPASy TrEMBL
Match: A0A5D3D0Y4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003570 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 6.2e-270
Identity = 467/537 (86.96%), Postives = 494/537 (91.99%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSL SS SY+  FLP +QSQP   N N+R L+L VTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGK L+KWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AY K RQREKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KV+SLVSEM EKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGST+KME+VYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LR+VESRIVGRDRIPYHYLISLYGS GNKEE YRVWNIYK VFPT+PNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKE N+SKAE FFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADGH KEGRVS+ALASW EAFS+EGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           G L+Q KYLQDKSYASLIGL DETIDND VS KGSSI+DE DKTE ESDDSEMLL L
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

BLAST of Sed0001468 vs. ExPASy TrEMBL
Match: A0A1S3AVV3 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN=LOC103483392 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 6.2e-270
Identity = 467/537 (86.96%), Postives = 494/537 (91.99%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSL SS SY+  FLP +QSQP   N N+R L+L VTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGK L+KWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AY K RQREKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KV+SLVSEM EKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGST+KME+VYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LR+VESRIVGRDRIPYHYLISLYGS GNKEE YRVWNIYK VFPT+PNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKE N+SKAE FFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADGH KEGRVS+ALASW EAFS+EGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           G L+Q KYLQDKSYASLIGL DETIDND VS KGSSI+DE DKTE ESDDSEMLL L
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

BLAST of Sed0001468 vs. ExPASy TrEMBL
Match: A0A6J1D178 (pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=3673 GN=LOC111016090 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.7e-267
Identity = 465/537 (86.59%), Postives = 492/537 (91.62%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSLSSS SY+      + +Q  R+N N R L L VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGKKL+KWELSRVVKELRKYKRYER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITS EDYFLRLPDNLKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYV+ R REKAE LL KMRTKG+ATHPLPFNVMMTLYMN KEY+KVESLVSEM EK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGSTE MEKVYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGS GNK+ETYRVWNIYKTVFPT+PNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           +GDVEGAEKIYEEWLSVK TYDPRI NLFIGWYVKEGNVSKAESFFDH+VEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WETLADGH KEGRVS+A+ASW EAFSAEGSKSWRPKPYNVLAYFDLCEKEG   SK+VLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
            LL+QSKYLQDKSYASLIGLS++T+D+ VVS  GSSIDDE D TE ESDDSE+LL L
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

BLAST of Sed0001468 vs. ExPASy TrEMBL
Match: A0A0A0L6I4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1)

HSP 1 Score: 926.8 bits (2394), Expect = 4.2e-266
Identity = 462/537 (86.03%), Postives = 489/537 (91.06%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH RTVSL S  SY+  FLP +QSQP   N N+R L L VTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+ KWN +YR ISLMENPELGSAS+LN+WENEGK ++KWELSRVVKELRKYKR+ER
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI S E+YFLRLP++LKDRR+YGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AY K RQREKAE LLEKMRTKGF THPLPFNVMMTLYMN KEY+KVESLVSEM E SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCGLQGSTEKME+VYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIPYHYLISLYGS GNKEE YRVWNIYK VFPT+PNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           VGDVEGAEKIYEEWL+VK TYDPRI NLFIGWYVKEGN SKAESFFDH+VEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE L D H KEGRVS+ALASW EAFSAEGSKSWRPKPYNVLAYFDLCEKEG  ASK+VLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           GLL+Q KYLQDK+YASLIGL DETIDN+ VS KGS+I+DE DKTE ESDDSEM L L
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

BLAST of Sed0001468 vs. ExPASy TrEMBL
Match: A0A6J1ID87 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita maxima OX=3661 GN=LOC111472746 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 3.2e-250
Identity = 433/537 (80.63%), Postives = 479/537 (89.20%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQTSVH   VSLSSSTSY+H   P +QSQ   +N N+R L L +TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           FERRP+VKWN +YR ISLMENPELGSAS+LN+WENEGKK++KWE+ RV+KELRKY+RYER
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI S EDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYVK RQREKAETLL KMRTKG+A H L FNVMMTLY+NFKEY+KVESLVSEMIEK I+L
Sbjct: 181 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIW+SS GLQGS EKME+VYE+MKQDRTINANWTTFSTMATMYIK GLIEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LRRVESRIVGRDRIP+HYL+SLYGS GNKEETYRVW +YKT+FPT+PNLG+HAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
            GD+EGAEKIYEEWLSVK  YDPRI NLF+GWYVKEG  SKAESFF+H+VE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LADG  KEGRVS+ALASW EAFSAEGS++WRPK + VLA+F+LCEKEG  ASK+VLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 481 GLLKQSKYLQDKSYASLIGLSDETIDNDVVSVKGSSIDDESDKTELESDDSEMLLNL 538
           GLL+QSK LQDK+Y SLIGLSDETIDNDVVS +GS+IDDESDKT  ESDDSEMLL +
Sbjct: 481 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 537

BLAST of Sed0001468 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 642.5 bits (1656), Expect = 3.0e-184
Identity = 320/530 (60.38%), Postives = 405/530 (76.42%), Query Frame = 0

Query: 1   MLLQTSVHRRTVSLSSSTSYAHPFLPAVQSQPIRQNPNHRSLQLCVTCSISQVHSYGTVD 60
           MLLQ +V  R V L+SS SY+   L   +S P+            + CSISQV+ YGTVD
Sbjct: 1   MLLQAAVQNRNVPLASSASYSR--LLRCRS-PVVSVAALSKKTAAIVCSISQVYGYGTVD 60

Query: 61  FERRPVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYER 120
           +ERRP+V+WN +Y+ ISLME PELG+AS+LN+WE  G+KL+KWEL RVVKELRKYKR  +
Sbjct: 61  YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 120

Query: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLN 180
           ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI   E++FL+LP+N KDRR+YG+LLN
Sbjct: 121 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 180

Query: 181 AYVKTRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQL 240
           AYV+ + REKAE LL  MR KG+A HPLPFNVMMTLYMN +EY KV+++V EM +K I+L
Sbjct: 181 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 240

Query: 241 DIYSYNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300
           DIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKAE+ 
Sbjct: 241 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 300

Query: 301 LRRVESRIVGRDRIPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIR 360
           LR+VE+RI GR+RIPYHYL+SLYGS GNK+E YRVW++YK+V P++PNLGYHA++S+L+R
Sbjct: 301 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 360

Query: 361 VGDVEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSST 420
           +GD+EGAEK+YEEWL VK +YDPRI NL +  YVK   +  AE  FDH+VE+GGKP+SST
Sbjct: 361 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 420

Query: 421 WETLADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLV 480
           WE LA GH ++  +SEAL     AFSAEGS +WRPK   +  +F LCE+E    SK+ ++
Sbjct: 421 WEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVL 480

Query: 481 GLLKQSKYLQDKSYASLIGLSD-ETIDNDVVSVKGSSIDDESDKTELESD 530
            LL+QS  L+DKSY +LI + +  T++N  +       + ++  T+L+ D
Sbjct: 481 ELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAH----ETDALLTQLQDD 523

BLAST of Sed0001468 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 3.2e-69
Identity = 153/449 (34.08%), Postives = 248/449 (55.23%), Query Frame = 0

Query: 65  PVVKWNDMYRGISLMENPELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYERALEI 124
           P+  ++ + R ++   +P      +L+ W ++G  +   EL  ++K LRK+ R+  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 125 YDWMSNREERFRLTTSDAAIQLDLISKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVK 184
            DWMS       ++  D AI+LDLI+KV G+   E +F  +P   ++  LYGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 185 TRQREKAETLLEKMRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYS 244
            +   KAE + ++M+  GF    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 245 YNIWLSSCGLQGSTEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 304
            N  L +  +    E MEK   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 305 ESRIVGRDR-IPYHYLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIRVGD 364
           E  +  + R   Y  L+S YG+AG KEE YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 365 VEGAEKIYEEWLSVKMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWET 424
           +E  EKI EEW +    +D RI +L I  Y K+G + KAE   + LV+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 425 LADGHEKEGRVSEALASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKEGHNASKDVLVGLL 484
           LA G++  G++ +A+  W  A        WRP    +++  D  E +        ++ LL
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 452

Query: 485 KQSKYLQDKSYASLI------GLSDETID 507
            +  ++   SY  L+      GLS + +D
Sbjct: 453 SERGHI---SYDQLLYDMNGAGLSWKIVD 475

BLAST of Sed0001468 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-68
Identity = 142/396 (35.86%), Postives = 223/396 (56.31%), Query Frame = 0

Query: 90  LNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           LN++    K + KWE+   +K+LR    Y  AL++ + M   E     T SD AI LDL+
Sbjct: 43  LNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--EERGMNKTVSDQAIHLDLV 102

Query: 150 SKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVKTRQREKAETLLEKMRTKGFATHPLP 209
           +K R IT+ E+YF+ LP+  K    YG+LLN Y K    EKAE LL KM+        + 
Sbjct: 103 AKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMS 162

Query: 210 FNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGSTEKMEKVYEQMK 269
           +N +MTLY    E +KV +++ E+  +++  D Y+YN+W+ +         +E+V E+M 
Sbjct: 163 YNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMN 222

Query: 270 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSAGNK 329
           +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   RD   Y +LI+LYG  G  
Sbjct: 223 RDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 282

Query: 330 EETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSVKMTYDPRITNLF 389
            E YR+W   +   P   N+ Y  +I  L+++ D+ GAE +++EW +   TYD RI N+ 
Sbjct: 283 TEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVL 342

Query: 390 IGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEALASWNEAFS--- 449
           IG Y +EG + KA    +     GGK N+ TWE   D + K G ++ AL   ++A S   
Sbjct: 343 IGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGK 402

Query: 450 AEGSKSWRPKPYNV---LAYFDLCEKEGHNASKDVL 480
            +G K W P P  V   ++YF+  +K+  N ++++L
Sbjct: 403 GDGGK-WLPSPETVRALMSYFE--QKKDVNGAENLL 433

BLAST of Sed0001468 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 255.8 bits (652), Expect = 7.9e-68
Identity = 140/409 (34.23%), Postives = 239/409 (58.44%), Query Frame = 0

Query: 90  LNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSDAAIQLDLI 149
           + +W+ EG  + K+EL+R+V+ELRK KRY+ ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 150 SKVRGITSVEDYFLRLPDNLKDRRLYGALLNAYVKTRQREKAETLLEKMRTKGFATHPLP 209
           SK+RG+ S E +F  +PD ++      +LL++YV+ +  +KAE L EKM   GF    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 210 FNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGSTEKMEKVYEQMK 269
           +N M+++Y++  +++KV  L+ E+  ++   DI +YN+WL++       E  EKVY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 270 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSAGNK 329
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ + G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 330 EETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSVKMTYDPRITNLF 389
           +     W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW SV  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 390 IGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEALASWNEAFSAEG 449
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   + + L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 450 SKSWRPKPYNVLAYFDLCEKEGHNASKDVLVGLLKQSKYLQDKSYASLI 499
            K W      V       E++G+    + L+ LL+++ Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

BLAST of Sed0001468 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 3.9e-67
Identity = 139/393 (35.37%), Postives = 219/393 (55.73%), Query Frame = 0

Query: 82  PELGSASLLNRWENEGKKLSKWELSRVVKELRKYKRYERALEIYDWMSNREERFRLTTSD 141
           P     SLL    + G  +S  EL  + K L +  RY+ AL++ +WM N+++    +  D
Sbjct: 50  PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD-IEFSVYD 109

Query: 142 AAIQLDLISKVRGITSVEDYFLRLPDNLKDRRL----YGALLNAYVKTRQREKAETLLEK 201
            A++LDLI K  G+   E+YF +L  +    R+    Y  LL AYVK +  ++AE L+EK
Sbjct: 110 IALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEK 169

Query: 202 MRTKGFATHPLPFNVMMTLYMNFKEYKKVESLVSEMIEKSIQLDIYSYNIWLSSCGLQGS 261
           +   GF   P PFN MM LY    +Y+KV  +VS M    I  ++ SYN+W+++C     
Sbjct: 170 LNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSG 229

Query: 262 TEKMEKVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYH 321
              +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  +   +R+ Y 
Sbjct: 230 VAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYF 289

Query: 322 YLISLYGSAGNKEETYRVWNIYKTVFPTVPNLGYHAIISALIRVGDVEGAEKIYEEWLSV 381
           +LI+LY S GNKE   R+W + K+V   +  + Y  ++S+L++ GD+E AE+++ EW + 
Sbjct: 290 FLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQ 349

Query: 382 KMTYDPRITNLFIGWYVKEGNVSKAESFFDHLVEVGGKPNSSTWETLADGHEKEGRVSEA 441
              YD R++N+ +G YV+ G + KAES    ++E GG PN  TWE L +G  K   + +A
Sbjct: 350 CFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKA 409

Query: 442 LASWNEAFSAEGSKSWRPKPYNVLAYFDLCEKE 471
           + + ++ F       WRP    V+A  +  EKE
Sbjct: 410 IDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKE 441

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903663.14.0e-27188.08pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida][more]
XP_008438222.11.3e-26986.96PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] ... [more]
XP_022147061.13.5e-26786.59pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia][more]
XP_004133941.18.6e-26686.03pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN5663... [more]
XP_022974155.16.6e-25080.63pentatricopeptide repeat-containing protein At1g02150 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q8LPS64.2e-18360.38Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
Q9SKU64.5e-6834.08Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
O227142.3e-6735.86Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
Q9SY071.1e-6634.23Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q3E9115.5e-6635.37Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3D0Y46.2e-27086.96Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AVV36.2e-27086.96pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1D1781.7e-26786.59pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=... [more]
A0A0A0L6I44.2e-26686.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1[more]
A0A6J1ID873.2e-25080.63pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT1G02150.13.0e-18460.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20710.13.2e-6934.08Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.11.6e-6835.86Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.17.9e-6834.23Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G27460.13.9e-6735.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 387..417
e-value: 5.4E-4
score: 17.9
coord: 174..203
e-value: 5.4E-5
score: 21.1
coord: 243..271
e-value: 4.4E-6
score: 24.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 175..203
e-value: 5.2E-4
score: 20.1
coord: 351..375
e-value: 0.066
score: 13.5
coord: 387..411
e-value: 0.074
score: 13.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 228..288
e-value: 5.4E-6
score: 26.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..271
score: 8.736214
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 171..205
score: 10.106377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 8.834866
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 251..342
e-value: 7.9E-11
score: 43.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 346..477
e-value: 1.8E-15
score: 59.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 79..250
e-value: 4.5E-17
score: 64.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 280..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..537
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 33..501
NoneNo IPR availablePANTHERPTHR45717:SF3OSJNBB0038F03.9 PROTEINcoord: 33..501

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001468.1Sed0001468.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding