![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0001461 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCAAAAAAAAAAAAAAGATTTCTTAATTATTACATTAATTTGGGATACCCTAAAGAAAAGATTTCTTAATTATTATATTTGGTAAATGAAATGTTCATTTAATTTCAATTACAAGAGAAGCCACACACAAGTCACAGGTCTCGTTCTACGTTCTGATCCATTACAATCTTCAAGTCTCCGTTTCTGAGAAAATGAGCTCGGAAGACAAATCCGCCGCCGTGGGGGTCGTCGTCCACCACCACCACCAACCCGATTCCGGCCACCCTCACTACGGAACTTTCCAAGGCGTCGCCAACTATCCTCCCGTCGGATTTCCCCAGCCGACTCGCCCAGCCACTGCCTCCGACTCTTACGATCCTTCTCAAACTCAGCCCTACGCTCACACATATCAACCAATCCATGGTAATCTCCTCTTAATCTGGTGTTTTTTGTTTCTCGTTGACTATTCTGCGATTTCCTTGATCTATTGCTTTTCCGTTTGGTTTGAACGACCCTAGTATAGTTGATCTTATCACTTGAATAGCTTATGATTCACCAAATTATGATCTGGTGGACGAGTTTGTGCCAGACATGGTTTAGTTCTCATAAATTTGACTCTGTGTTTCAATTCGCATTTCACTTGGAGATTCGTACTAACCACCGGATGTTTGAGATTAGATCCTGCCTTTTTCTTGTTCTGTGAGTGTATTCAGGATCTCTTATCAATAAGTGAGGATAGATGGACTATTACTCCTCTCATCATCATCGTGGAATCTCATATTATCTAATAAACTGTTCGGTGTCTACTTCGAATTTTTTATTTCAAAATGGAAAAATAATTAGCTCATCAATTTCTAAGCCACTTTTAACTCATGATTAACAACGATGATCTCATTATGTTATAGTTTGTAAGTGTTGTTTAATTTGCAAATTTTTATCATAATTCATAACAAAAGCTCGACAAATAGTTTGGAAGGATTATCACTTAATAGCCACGAGATTCTCTATTGATTTTTTAAAAGCTTGGTTTTGGCTGTCATAGTTTTTATATATTTGGATGCAGCTTTTTTGTTATTTGTCTCATGTTCGTCACTATATCATATTAATCCCTTGTTTCTCTTGAAAAAGTATCATTTGAGATTTGTTGGTGTATGGGCAACTTTTTCTTAAATATATACTCTTTGGCTTTGCTTGATATATATCAGTACCAACGAATACAAAAGTAGTAGATCAGTGTTTTTGTTAATGAGAAATGTCCCTTATTTTTGTGTTCCTTTCCAGGATATGCTATCGCTGAAGGAAGACCAGTGAGAGAGCCGCGCCTTCCTTGCTGTGGTATTGGCTGTGGGTGGTTCCTGTAAGTTGTCATAATTGTTGGACCTCATCAACATTTGCTGAAAATTATAGAATTGTTATCAAGCCAGGCCATCATTATATTTATGTTCACATTAAGCATTTTAAATTTTCAGGGGTTACAGTTTCAATGAGTTATCAATTCAGAAGACGATTAGAATCGTACAGCTTCCATGTTATGAACTAAAACAGCCAACTTTTAAATTGGAATGATAGAATTGCTAGTTGTGTCCTGCCTACTCTTTATATCTTGCTATTTAAATGTTGTGACCAGATTTTTATGTCTGATATATGTGTTGACTGATCAACTAAATTACTAACTGCATTCTTCAGGTTCATATTTGGTTTCTTCCTAGCTGGTATCCCATGGTATTTAGGGGCATTTCTTGTACTATTTAGCAGGGTAGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGTGAGTAACTCTTATCCATTGTTCTTTTCGACTTCTTCAGCTTCATGAACATGTTCTCATATTTTCAATCTAGTTCCTTTTTTTTTAAATATTAAGGAAACGAAATGTTTCATGAATGAGTGAAAAAGTCACGAAATGTCCTATCGAAATTAATTACAATGGATGGAAACACCGAGTAAAAACAGATAGAAATGAACTTCATATGTTGATATAACTGTGGAGATACAAACAAAACAGACCATCCAAAAAACTAGAACTAGTTTTGCAATTCGATTCCATCACAAGAAGTTATCTTTCTGTTGTATTTTTTTTCAATTCACCAAACGAAGATTGGGCTGGGTTGGGTAGGAGGCCTTCGGAGTGGTGGGTGATTGTTATTTGTAGATAACTAGAACTCATTGTTTTTTAAGGGGCGTTTGGGGCAAAGAGAATAAAAATGATTATGATGGAATGAGAGTGCGAGGAGAACACGAGAAAAATAATTAACAGAGAGAATGATATATGTTAGGGTGAGGGAAATGATTATGGGAGAAATCGTTATTTTTGTTTGGGGTGCATGAAATAGGGGAAGCATTACCCGTGTTTGGGTGCAAAGAATGATCATTAGGAAACATAATAGTGAGTATGAGGAGAATGAAAAGTGGTTATTAGGGAATGAATATTGATTGTGGGAGAAATGATTATCGATGGCTCAAACATGGGTAAGTAAGTTATTCCCTCCATAATCATATTCTCATTCTCCTTGCCTCAACCACCCTTTAGTTTTAGTATGTTGAGTTCCCTCTTGAGAGTAGTTTTGTTTTGGAGCTTTCTGTTGAATTAAAATGGTTTACTTAAAATTTCTTTGTTTAGTTTTCCTTTAAAATTCATCAGCGGAGGATTAAGTTCGCCCAGTTTTCTCTTTTCTTCATGAAAAAATGTTAATTTTCTGAACATTGAACGCTAATATATTACGTTGTATATCAGGCTGTTCTTGTAACAGTTGCTGTGTTATTCGGTGCAACAAAGGGAGCTGATATCTGGTAACCAATCCTGAACCAAAAATATTGTATAGTTTGCAAATATGTATGAACACAACACAATCCACTAAATTTGAGCACATCATCTTCAAGCTAGTTCCATTAAAACCTGAATTTGTGAGACTTTTAGAGCCTATGGATATTCTGCAAAATAATGTTATTTATTTATTCTATGATTGTGTCCAAATATGTATTATGACTAACAATTTGTCTGAAACTCCTCTGTTGGATTGCACTCATCTTTTGGTAAATATATCTCTTCTTTGTTGTGTTGGAATGAACATTTGAATATCGAAACAGAAAACTGTTTTTCGCCGA CTTTCAAAAAAAAAAAAAAGATTTCTTAATTATTACATTAATTTGGGATACCCTAAAGAAAAGATTTCTTAATTATTATATTTGGTAAATGAAATGTTCATTTAATTTCAATTACAAGAGAAGCCACACACAAGTCACAGGTCTCGTTCTACGTTCTGATCCATTACAATCTTCAAGTCTCCGTTTCTGAGAAAATGAGCTCGGAAGACAAATCCGCCGCCGTGGGGGTCGTCGTCCACCACCACCACCAACCCGATTCCGGCCACCCTCACTACGGAACTTTCCAAGGCGTCGCCAACTATCCTCCCGTCGGATTTCCCCAGCCGACTCGCCCAGCCACTGCCTCCGACTCTTACGATCCTTCTCAAACTCAGCCCTACGCTCACACATATCAACCAATCCATGGATATGCTATCGCTGAAGGAAGACCAGTGAGAGAGCCGCGCCTTCCTTGCTGTGGTATTGGCTGTGGGTGGTTCCTGTTCATATTTGGTTTCTTCCTAGCTGGTATCCCATGGTATTTAGGGGCATTTCTTGTACTATTTAGCAGGGTAGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTCTTGTAACAGTTGCTGTGTTATTCGGTGCAACAAAGGGAGCTGATATCTGGTAACCAATCCTGAACCAAAAATATTGTATAGTTTGCAAATATGTATGAACACAACACAATCCACTAAATTTGAGCACATCATCTTCAAGCTAGTTCCATTAAAACCTGAATTTGTGAGACTTTTAGAGCCTATGGATATTCTGCAAAATAATGTTATTTATTTATTCTATGATTGTGTCCAAATATGTATTATGACTAACAATTTGTCTGAAACTCCTCTGTTGGATTGCACTCATCTTTTGGTAAATATATCTCTTCTTTGTTGTGTTGGAATGAACATTTGAATATCGAAACAGAAAACTGTTTTTCGCCGA ATGAGCTCGGAAGACAAATCCGCCGCCGTGGGGGTCGTCGTCCACCACCACCACCAACCCGATTCCGGCCACCCTCACTACGGAACTTTCCAAGGCGTCGCCAACTATCCTCCCGTCGGATTTCCCCAGCCGACTCGCCCAGCCACTGCCTCCGACTCTTACGATCCTTCTCAAACTCAGCCCTACGCTCACACATATCAACCAATCCATGGATATGCTATCGCTGAAGGAAGACCAGTGAGAGAGCCGCGCCTTCCTTGCTGTGGTATTGGCTGTGGGTGGTTCCTGTTCATATTTGGTTTCTTCCTAGCTGGTATCCCATGGTATTTAGGGGCATTTCTTGTACTATTTAGCAGGGTAGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTCTTGTAACAGTTGCTGTGTTATTCGGTGCAACAAAGGGAGCTGATATCTGGTAA MSSEDKSAAVGVVVHHHHQPDSGHPHYGTFQGVANYPPVGFPQPTRPATASDSYDPSQTQPYAHTYQPIHGYAIAEGRPVREPRLPCCGIGCGWFLFIFGFFLAGIPWYLGAFLVLFSRVDYREKPGYVACSIAAVLVTVAVLFGATKGADIW Homology
BLAST of Sed0001461 vs. NCBI nr
Match: XP_008452440.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo] >KAA0064318.1 60S ribosomal protein L18a-like protein [Cucumis melo var. makuwa] >TYK20268.1 60S ribosomal protein L18a-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63 Identity = 119/153 (77.78%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Sed0001461 vs. NCBI nr
Match: XP_038896754.1 (60S ribosomal protein L18a-like protein [Benincasa hispida]) HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62 Identity = 120/153 (78.43%), Postives = 127/153 (83.01%), Query Frame = 0
BLAST of Sed0001461 vs. NCBI nr
Match: XP_022135554.1 (60S ribosomal protein L18a-like protein [Momordica charantia]) HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62 Identity = 115/154 (74.68%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of Sed0001461 vs. NCBI nr
Match: XP_023536200.1 (60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248.1 bits (632), Expect = 5.1e-62 Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 0
BLAST of Sed0001461 vs. NCBI nr
Match: XP_022976878.1 (60S ribosomal protein L18a-like protein [Cucurbita maxima]) HSP 1 Score: 247.7 bits (631), Expect = 6.6e-62 Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy Swiss-Prot
Match: Q8L9S1 (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g29970 PE=2 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 9.1e-30 Identity = 71/145 (48.97%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy TrEMBL
Match: A0A5D3D9U1 (60S ribosomal protein L18a-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004080 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 7.6e-64 Identity = 119/153 (77.78%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy TrEMBL
Match: A0A1S3BUZ1 (60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103493475 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 7.6e-64 Identity = 119/153 (77.78%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy TrEMBL
Match: A0A6J1C1R6 (60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111007453 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.4e-63 Identity = 115/154 (74.68%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy TrEMBL
Match: A0A6J1INF5 (60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111477112 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.2e-62 Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 0
BLAST of Sed0001461 vs. ExPASy TrEMBL
Match: A0A0A0L1Y0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621210 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62 Identity = 116/153 (75.82%), Postives = 127/153 (83.01%), Query Frame = 0
BLAST of Sed0001461 vs. TAIR 10
Match: AT1G17080.1 (Ribosomal protein L18ae family ) HSP 1 Score: 169.5 bits (428), Expect = 2.1e-42 Identity = 85/140 (60.71%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of Sed0001461 vs. TAIR 10
Match: AT1G53560.1 (Ribosomal protein L18ae family ) HSP 1 Score: 144.1 bits (362), Expect = 9.6e-35 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of Sed0001461 vs. TAIR 10
Match: AT1G29970.1 (60S ribosomal protein L18A-1 ) HSP 1 Score: 131.3 bits (329), Expect = 6.4e-31 Identity = 71/145 (48.97%), Postives = 84/145 (57.93%), Query Frame = 0
BLAST of Sed0001461 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 ) HSP 1 Score: 117.5 bits (293), Expect = 9.6e-27 Identity = 64/126 (50.79%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Sed0001461 vs. TAIR 10
Match: AT3G14595.1 (Ribosomal protein L18ae family ) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25 Identity = 69/150 (46.00%), Postives = 87/150 (58.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|