Sed0001451 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTCTTCGACAATCTACATCAATAGGAAATGGAGCATCGCAAAAGGCTGGAGACGTTCCAAAAGGCTACTTCATAGTTTATGTTGGTGAGGAACAAAAGAACCGTTTCGTCATCCAACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATCACCATCCAATGGGTGGTATCACAATTTCTTGCAGTGAAGAATTTTTTCTCAGTGTCACTCAGTGTTTAAATAACTCATGA ATGGGTTTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTCTTCGACAATCTACATCAATAGGAAATGGAGCATCGCAAAAGGCTGGAGACGTTCCAAAAGGCTACTTCATAGTTTATGTTGGTGAGGAACAAAAGAACCGTTTCGTCATCCAACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATCACCATCCAATGGGTGGTATCACAATTTCTTGCAGTGAAGAATTTTTTCTCAGTGTCACTCAGTGTTTAAATAACTCATGA ATGGGTTTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTCTTCGACAATCTACATCAATAGGAAATGGAGCATCGCAAAAGGCTGGAGACGTTCCAAAAGGCTACTTCATAGTTTATGTTGGTGAGGAACAAAAGAACCGTTTCGTCATCCAACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATCACCATCCAATGGGTGGTATCACAATTTCTTGCAGTGAAGAATTTTTTCTCAGTGTCACTCAGTGTTTAAATAACTCATGA MGFRLPRIVHAKQSLRQSTSIGNGASQKAGDVPKGYFIVYVGEEQKNRFVIQLSYLNQPSFQDLLSQAEEEFGYHHPMGGITISCSEEFFLSVTQCLNNS Homology
BLAST of Sed0001451 vs. NCBI nr
Match: XP_022135743.1 (auxin-induced protein 15A-like [Momordica charantia]) HSP 1 Score: 168.7 bits (426), Expect = 2.6e-38 Identity = 83/100 (83.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of Sed0001451 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 168.3 bits (425), Expect = 3.3e-38 Identity = 83/100 (83.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Sed0001451 vs. NCBI nr
Match: XP_008448014.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049691.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12181.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37 Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Sed0001451 vs. NCBI nr
Match: XP_011658575.1 (auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protein 15A [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 8.2e-37 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of Sed0001451 vs. NCBI nr
Match: XP_022969518.1 (auxin-induced protein X10A-like [Cucurbita maxima]) HSP 1 Score: 163.7 bits (413), Expect = 8.2e-37 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25 Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25 Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.4e-25 Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.7e-25 Identity = 61/98 (62.24%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.3e-24 Identity = 58/98 (59.18%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy TrEMBL
Match: A0A6J1C5R3 (auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007633 PE=3 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38 Identity = 83/100 (83.00%), Postives = 88/100 (88.00%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy TrEMBL
Match: A0A5A7U7Y6 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001220 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37 Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy TrEMBL
Match: A0A1S3BIR0 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490324 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.8e-37 Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy TrEMBL
Match: A0A6J1I180 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468494 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.0e-37 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of Sed0001451 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.0e-37 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 0
BLAST of Sed0001451 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26 Identity = 54/99 (54.55%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of Sed0001451 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21 Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Sed0001451 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.0 bits (245), Expect = 2.3e-21 Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of Sed0001451 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.8 bits (242), Expect = 5.2e-21 Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Sed0001451 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.8 bits (242), Expect = 5.2e-21 Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|