Sed0001434 (gene) Chayote v1

Overview


Name	Sed0001434
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CYSTM domain-containing protein
Location	LG05: 36725829 .. 36727575 (+)
RNA-Seq Expression	Sed0001434
Synteny	Sed0001434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTAGCCGCCCTTGGTCGGACCCTCTCTATATATACACCCACTCCACTCTCCCTAATTGCCTATCAAACTAATTAACAACATAAATACACTATTTCTAATTTTCCTTTCCTCATCTTCCTCTCCTCTCCTCCTCTCCTATTTTATTTTATTTCTTACATCAACATGAGTTCCGCTCAGCCTGCAGGTGATTTAATTTACTCATTTAATTACATATATATATATATATATATATTTCCAAATTCTATATATTATAAAACCCTTTTGTTTATTTGATTTTTGGGGAATTTGTGTGTACATACAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATTCAGCTCCGCCGCCGGCGGGGTATCCGATGAGAGACGGCGGCGACTTCTCCCAGCAACCCGCTCCTGTTCCTTCTCAAACTACCTCCAGAGGCGATGGCTTTTGGAAAGGCTGGTAATTATTATATCAAACCTTCCCTACCATTAATTATTATTATTTTTTTAATTTTACACATAAGTCTGTGTGTGTTTTTTTTTAAGAATTTAATTATAATCGGAATTCAAACTTTAAACAAATATTACTCTTTTTAGCGATAAATTTTCTTTCTAGTTGAAGATATATATTAATTAACTATAAGCTTGTTTTTTTTTAGAAATCTATTAAGTTTTAAGTGCATGGTTTTTGTTTGAAAAAAATTAGGAGGAGGTCTAAGATGTTTGATCTATGTTTCTAAGTAAAAAAAAAAAAAAAACTCAAAAGAAAATTAACTTTCTTAGCAAAGATAAATTTTCATTTTAATAATCATGATTATCTTGAGTAGCTTCAACTAATTTTGCTGCACATATTATTTGATTATATAATATTTAGATGAGAGGTTAAATAACGCTACAAAATTATTTTCTAGATAAATAATTACTATACATTGAATTTATCCTCTCTTAGATCCATATTAAAAGATTTTTTTTAAAAAAAATAAGAGTTATGTTTTTTAAGATATAATTTTTTTTTTAATAGTGCAACCATAACAATATTAGAAGATATGACATATGAACAAATAATTTTATAGTTTTTGGTTCCCTATCAAACAACTAAAAAAGATTAATGTTTCTATTTCTTTGAAAACTATGGTTGTTAGTCATGATGCTTATGTTTAATCTTTGTGAAGAAACTTAAATAATTTGAAAAAATAAACAGAAACTATAGTTTTTTTTTTTTTTTTTTAATGTGAATTCCTTTTTTGAATATGTTTCTAAAACATTTGAAAATGAGAAGAAAAAAAAACTTACAAAAATATGGTATAAATCCAACTGTTTATTTATTTATTTACATTTTTGTGCAGTTGTGCTGCGTTGTGTTGCTGCTGTGTATTGGATGCATGCTTCTAATCACCAGAAGTGAAGACAACAAATTCTTGAAGATCTATATGATCCATTTGCATATTTGTCATTTTAGTGTTTTTATTTTTATTTAATTTTTTGTGAATTTTTGGATTATTAATTATATGATGTTGTAATAATAAATTGGGTGTTGAATATTAGAAATCTTGCTGATGAAACCATATTGACTTGTGTGATTCATACCATATGTTTTTCTAGGGAGTGGTTGTAAGTTGGTTTGTTTTCATATCCTCATGACACGTGTGGTGAACTATTTTGTCACACGTGTGCATTATTGAGGGATAAGGATGAAAGAGGGAATTCGAATTCGAATTTTTTTTTGGCTTGCTTATTCAACTTGGTTACGCA

mRNA sequence

GGTTTAGCCGCCCTTGGTCGGACCCTCTCTATATATACACCCACTCCACTCTCCCTAATTGCCTATCAAACTAATTAACAACATAAATACACTATTTCTAATTTTCCTTTCCTCATCTTCCTCTCCTCTCCTCCTCTCCTATTTTATTTTATTTCTTACATCAACATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATTCAGCTCCGCCGCCGGCGGGGTATCCGATGAGAGACGGCGGCGACTTCTCCCAGCAACCCGCTCCTGTTCCTTCTCAAACTACCTCCAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTATTGGATGCATGCTTCTAATCACCAGAAGTGAAGACAACAAATTCTTGAAGATCTATATGATCCATTTGCATATTTGTCATTTTAGTGTTTTTATTTTTATTTAATTTTTTGTGAATTTTTGGATTATTAATTATATGATGTTGTAATAATAAATTGGGTGTTGAATATTAGAAATCTTGCTGATGAAACCATATTGACTTGTGTGATTCATACCATATGTTTTTCTAGGGAGTGGTTGTAAGTTGGTTTGTTTTCATATCCTCATGACACGTGTGGTGAACTATTTTGTCACACGTGTGCATTATTGAGGGATAAGGATGAAAGAGGGAATTCGAATTCGAATTTTTTTTTGGCTTGCTTATTCAACTTGGTTACGCA

Coding sequence (CDS)

ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATTCAGCTCCGCCGCCGGCGGGGTATCCGATGAGAGACGGCGGCGACTTCTCCCAGCAACCCGCTCCTGTTCCTTCTCAAACTACCTCCAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTATTGGATGCATGCTTCTAA

Protein sequence

MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCAALCCCCVLDACF

Homology

[Close]

BLAST of Sed0001434 vs. NCBI nr
Match: KAG6591814.1 (hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024679.1 hypothetical protein SDJN02_13497 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS QPA VYPPPST+PTSY+APPPAGYP RDGGDFS QPAPVP++T SRGDGFWKGCCA
Sbjct: 1  MSSGQPAAVYPPPSTMPTSYAAPPPAGYPTRDGGDFS-QPAPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. NCBI nr
Match: XP_022137938.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia])

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSSAQPA VYPPPST P SY+APPPAGYP RDGGDFS QP PVP++T SRGDGFWKGCCA
Sbjct: 1  MSSAQPAAVYPPPSTAPASYAAPPPAGYPTRDGGDFS-QPPPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          A+CCCCVLDACF
Sbjct: 61 AICCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. NCBI nr
Match: XP_031739667.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus] >KGN54976.1 hypothetical protein Csa_012002 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.4e-24
Identity = 63/74 (85.14%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1  MSSAQPAGV-YPPP-STVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGC 60
          MSSAQPAGV YPPP STVPTSYSAPPPAGYP R+GGDFS    PVP++T SRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS---TPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. NCBI nr
Match: KAF3972548.1 (hypothetical protein CMV_003960 [Castanea mollissima])

HSP 1 Score: 110.5 bits (275), Expect = 5.9e-21
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P +T SRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. NCBI nr
Match: KAF3953656.1 (hypothetical protein CMV_020922 [Castanea mollissima])

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P +T SRG+GFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGEGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04
Identity = 31/76 (40.79%), Postives = 34/76 (44.74%), Query Frame = 0


Query: 6  PAGVYPPPSTVPTSY--SAPPPAGYPMRDGGD-------FSQQPAPVPSQTTSRGDGFWK 65
          P   YPP    P  Y     PP GYP +             Q P P   Q      GF +
Sbjct: 23 PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLE 82

Query: 66 GCCAALCCCCVLDACF 73
          GC AALCCCC+LDACF
Sbjct: 83 GCLAALCCCCLLDACF 98

[Close]

BLAST of Sed0001434 vs. ExPASy TrEMBL
Match: A0A6J1CBQ4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111009227 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 61/72 (84.72%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSSAQPA VYPPPST P SY+APPPAGYP RDGGDFS QP PVP++T SRGDGFWKGCCA
Sbjct: 1  MSSAQPAAVYPPPSTAPASYAAPPPAGYPTRDGGDFS-QPPPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          A+CCCCVLDACF
Sbjct: 61 AICCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. ExPASy TrEMBL
Match: A0A7N2R3F7 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS++PA  YPPPSTVP  Y APPPAGYP +DG  + Q P P P +T SRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTVPAYYVAPPPAGYPTKDGSGYFQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. ExPASy TrEMBL
Match: A0A7N2LG73 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.4e-21
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P +T SRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCV+DACF
Sbjct: 61 ALCCCCVVDACF 71

[Close]

BLAST of Sed0001434 vs. ExPASy TrEMBL
Match: A0A7N2LJ98 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.4e-20
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCA 60
          MSS++PA  YPPPST PT Y A PPAGYP +DG  +SQ P P P +T SRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPTYYVAAPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCC LD CF
Sbjct: 61 ALCCCCALDVCF 71

[Close]

BLAST of Sed0001434 vs. ExPASy TrEMBL
Match: A0A7N2LI27 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 46/63 (73.02%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 10 YPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCAALCCCCVLD 69
          YPPPST P  Y APPPAGYP +DG  + Q   P P +T SRGDGFWKGCCAALCCCCVLD
Sbjct: 29 YPPPSTAPAYYVAPPPAGYPTKDGSGYPQN-LPPPVETKSRGDGFWKGCCAALCCCCVLD 88

Query: 70 ACF 73
          ACF
Sbjct: 89 ACF 90

[Close]

BLAST of Sed0001434 vs. TAIR 10
Match: AT3G22240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 9  VYPPPSTVPTSYSAPPPAGYPMRDG--GDFSQQPAPVPSQTTSRGDGFWKGCCAALCCCC 68
          V  P  T    Y++PPP GYP RD   GD    P     +T S+GDGFWKGCCAA+CCCC
Sbjct: 11 VEKPSQTSSGPYTSPPPIGYPTRDAMVGD----PPAAAVETKSKGDGFWKGCCAAICCCC 70

Query: 69 VLDACF 73
          VLDACF
Sbjct: 71 VLDACF 72

[Close]

BLAST of Sed0001434 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 36/71 (50.70%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 2  SSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCAA 61
          S  Q +G YP P      Y  PPP GYP  D           P +T S+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYMTPPPLGYPTSD----ISHATVAPVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. TAIR 10
Match: AT2G32210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-11
Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 2  SSAQPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCAA 61
          S  Q +G YP P      Y APPP GYP  D    +        +T S+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYVAPPPLGYPTND----TSHATVATVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of Sed0001434 vs. TAIR 10
Match: AT1G05340.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-09
Identity = 35/68 (51.47%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 5  QPAGVYPPPSTVPTSYSAPPPAGYPMRDGGDFSQQPAPVPSQTTSRGDGFWKGCCAALCC 64
          Q AG  PPP  + T  S PPP GYP       S     V  +T S+GDGF+KGC AA+CC
Sbjct: 8  QSAGANPPP-PMSTCTSPPPPIGYPTNQPSHGSVAQGKV--ETKSKGDGFFKGCLAAMCC 67

Query: 65 CCVLDACF 73
          CC LD CF
Sbjct: 68 CCALDICF 72

[Close]

BLAST of Sed0001434 vs. TAIR 10
Match: AT3G22235.1 (BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1); Has 122 Blast hits to 122 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07
Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 9  VYPPPSTVPTSYSAPPPAGYPMRDG--GDFSQQPAPVPSQTTSRGDGFWKGCCAALCCCC 68
          V  P  T    Y++PPP GYP RD   GD    P     +T S+G    +GCCAA+CCCC
Sbjct: 11 VQKPSETSSGPYTSPPPIGYPTRDAVVGD----PPAAAVETNSKGVN-PEGCCAAICCCC 70

Query: 69 VLDACF 73
          VLDACF
Sbjct: 71 VLDACF 71

The following BLAST results are available for this feature:

BLAST of Sed0001434 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591814.1	1.9e-27	87.50	hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022137938.1	2.1e-26	84.72	cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica c...	[more]
XP_031739667.1	4.4e-24	85.14	cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sat...	[more]
KAF3972548.1	5.9e-21	73.61	hypothetical protein CMV_003960 [Castanea mollissima]	[more]
KAF3953656.1	1.7e-20	72.22	hypothetical protein CMV_020922 [Castanea mollissima]	[more]

BLAST of Sed0001434 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	1.4e-04	40.79	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]

BLAST of Sed0001434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBQ4	1.0e-26	84.72	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]
A0A7N2R3F7	4.9e-21	73.61	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LG73	6.4e-21	72.22	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LJ98	5.4e-20	70.83	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LI27	1.9e-17	73.02	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Sed0001434 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22240.1	2.2e-13	57.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G32190.1	1.6e-11	50.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G32210.1	2.0e-11	50.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G05340.1	1.5e-09	51.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G22235.1	1.4e-07	50.00	BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 23..72 e-value: 2.8E-10 score: 40.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR31568:SF60	CYSTEINE-RICH/TRANSMEMBRANE DOMAIN A-LIKE PROTEIN	coord: 4..72
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 4..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001434.1	Sed0001434.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane