Sed0001424 (gene) Chayote v1

Overview
NameSed0001424
Typegene
OrganismSechium edule (Chayote v1)
DescriptionAlba domain-containing protein
LocationLG12: 33870958 .. 33873610 (+)
RNA-Seq ExpressionSed0001424
SyntenySed0001424
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTATTCATCTAAAATCCCAATAATAAAAATAATTTTTGGTAATTTTTTGCGTCTTGTGACTCCCGAAACACAAATAGGTGAGCTTTATCGAAAACCCTAATTTTGTGAAAGTCGCATTTTGAGTTTTAGGGTTTTAGGTTTGCGAAGCTCAATGGAAGAGATAACGGAGGGTGTAAGCGCCATCGCCTTGACTGCCGACTCCTCGCAGAAGAAGAATCGAATTCAGGTCTCCAACACCAAGAAGCCCCTCTTCTTCTATGTTAATCTCGCCAAGGTTCCTTTCCTTTTTCGCGAATTTGATATTTGGTTTCGATTGTGAAGTTTTTAAAGTTTTGGCTTGTGTCTTGTTTGTTTCTTTCGTTGTTCTAACCCTTTGGTTGTGGAATTTTTCGATTTTTGTAGAGGTATATGCAGCAGTATAATGAGGTCGAGCTTTCTGCTCTTGGAATGGGTACGTTTTCTGTACTGTTTTCGGGCTTAAAATTAAGATCCGTTTGATAAACATTTGGTTTTTTGTTTATGAAATTTAAGCTTATTTCTATTCAAATTTCCTATTATGTTCATCTTTCCTTAAAAAAGTAAGTGAATACTAACTAAATTTAAAAAAAAAAACAAGCTTTTGGAAACTTACTTTTTTTTTTTTTGGTTTCCAAATTTTGGTTTTGTTGCCTAAGATATATGTAAGATGTAGATATCCAGATAATAAAAAACGGTATGATAAGGTAGTTATTGTAGGCTTAAATTTCAAAAACAAAAAATGAAAAACAAAATGGTTATCAAAGTGGGCCTTAGATTTTGGTTTTTAGTTTTTGGAAATTAAGCTTACTACCACGGCTCCAACCTATGGGTTTTAAAAAAAAAAAACTTTGATATTGATATTAACGTTTTACCTATGTTTTTAAAAAATCAAACCAAAAACTGAAAACTAAAAGCAAAATTAGTTCCAAAAATTTGTTTTGATTTTTGAAATTTGATTAGAATTCTAAACTTCCTCAGAGTATTTGAGTGAAAACAAGCATACATTTCAAAAACCCAAATGGTTATCTAACATGGAGTTAAAGGATTTTCGATTTTGAGAAATGCGGATTAGCTTTGTGAGTTTAGTTTTTGTTATTATGTATGTTTAGTATTGTAACGTAGGGATGCGGTTGCTGTTTAATGCGCTCTCTTGATTGGAACTGGATTGTAAGGCAGATTTATTTACTTTTTTTTCATCTTTGATTGGTACTTCCTTTATTTGGGCGTTTCCTTTGTCTTGATGAAATAGAACAGTTTGTGCCCTCAGGACTTCTTAATTTTTCGGTCTTGTGCCTGTATGTGGTTCATTGATGTACTTGTTTTGCTGTTGATTGCTTTTGAGTAATCCAATTAAATATATCTTGTTCATGAGTGTTTTTCGTTTTGTCAACCGGTAGTATCAAAATACAGTTATTTTGTGATCTCGATTGACAAAAATGGGCTACTTAACTCAGGAATGCTTTTAAGCTAAAATATTCAGTTTAAGAACCTGGGTTCTTAAATTTAATCCTGCCATATACTTCATGGCCATCTATGTTTTGTTTAAGTTTGCAACATAGGCACTTGAATGCTGCATAAATGAAACACCATTACAAATGCGGAAACTGGAAAGTCAACTTGCCATTGGTTTTTATGCGACTGGTCAATAATTTTTCTACTTGCATATGTATGCAGTCAATTGATCCTTTTGCGATGCTGATTTGGGTTATTAATATGTTCAAATTTCTATGCATGGTTTTGCAGCCATTGCAACTGTTGTGTCTGTTGCAGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAGTAAATATCATCTTCTTTCCGCTTTAATACTATGCAATCGGGTTTATCGCTTGACACTCACGAAAATTGTCTTATATTCTTTAGAGATTATGACTTCCACCGTTGATATCAAGGATGATTCACGTGGAAGACCCGTTCAAAAGGCTAAGGTAATACTGTTTTATTAGTTTGGTTTCTTTTTAATGAATGAAAATTTGTAAGTTACCTCTCTCACATACATTTTTTGGCATATAAAATTATAATCTATTGTAAATTTTAATCCAACTTATTGCATTAATCAATTCTCTTTGTTTGACTCTAGAAATCATTGGTGCAGATAATAAAATGTTTATTCGCTGAGCGTGCAAATGAATAACCTGGACTGTGCAAAATTCTGTGTTTTCATTTGATTGGATGTGTCTTAACCCTAGTCATGGCTGGTTTTTACCTTTCAGATTGAGGTTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCCGCTGCGGAGGAAAGGGAAAAAGAAGATGGTGAAGAGCAGAGTTGAAAAGTTTTTTTTTATTTCCTTTGTTTTTCTTCTCTGTTCTTATCCTCCGTGTGGACGAGTCTGGTTATTTCGTTATATCTGGTCTCTTTGTTCTTAACTAACGTTAGTTACCAAGTGGTTTATTTCTGATTGTAGGCTTTTTAGTTGGGGAACCATTTACATGCCCTTTTTAGATTCCATGGGATATGATCGTTTAAGAGAGTGGAAACATAATCAAACTGAGTTGGTCTTCAAAATCAAGTTTATATTGCTAATTTTGCATTCAATAGATGTTCTGCTTCAGATATTATAACTGCA

mRNA sequence

AATTATTCATCTAAAATCCCAATAATAAAAATAATTTTTGGTAATTTTTTGCGTCTTGTGACTCCCGAAACACAAATAGGTGAGCTTTATCGAAAACCCTAATTTTGTGAAAGTCGCATTTTGAGTTTTAGGGTTTTAGGTTTGCGAAGCTCAATGGAAGAGATAACGGAGGGTGTAAGCGCCATCGCCTTGACTGCCGACTCCTCGCAGAAGAAGAATCGAATTCAGGTCTCCAACACCAAGAAGCCCCTCTTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTATAATGAGGTCGAGCTTTCTGCTCTTGGAATGGCCATTGCAACTGTTGTGTCTGTTGCAGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATTATGACTTCCACCGTTGATATCAAGGATGATTCACGTGGAAGACCCGTTCAAAAGGCTAAGATTGAGGTTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCCGCTGCGGAGGAAAGGGAAAAAGAAGATGGTGAAGAGCAGAGTTGAAAAGTTTTTTTTTATTTCCTTTGTTTTTCTTCTCTGTTCTTATCCTCCGTGTGGACGAGTCTGGTTATTTCGTTATATCTGGTCTCTTTGTTCTTAACTAACGTTAGTTACCAAGTGGTTTATTTCTGATTGTAGGCTTTTTAGTTGGGGAACCATTTACATGCCCTTTTTAGATTCCATGGGATATGATCGTTTAAGAGAGTGGAAACATAATCAAACTGAGTTGGTCTTCAAAATCAAGTTTATATTGCTAATTTTGCATTCAATAGATGTTCTGCTTCAGATATTATAACTGCA

Coding sequence (CDS)

ATGGAAGAGATAACGGAGGGTGTAAGCGCCATCGCCTTGACTGCCGACTCCTCGCAGAAGAAGAATCGAATTCAGGTCTCCAACACCAAGAAGCCCCTCTTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTATAATGAGGTCGAGCTTTCTGCTCTTGGAATGGCCATTGCAACTGTTGTGTCTGTTGCAGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATTATGACTTCCACCGTTGATATCAAGGATGATTCACGTGGAAGACCCGTTCAAAAGGCTAAGATTGAGGTTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCCGCTGCGGAGGAAAGGGAAAAAGAAGATGGTGAAGAGCAGAGTTGA

Protein sequence

MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAEEREKEDGEEQS
Homology
[Close]
BLAST of Sed0001424 vs. NCBI nr
Match: XP_022961070.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516864.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516865.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG6589857.1 hypothetical protein SDJN03_15280, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023529.1 hypothetical protein SDJN02_14555 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.0 bits (580), Expect = 4.6e-56
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++IALTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSIALTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. NCBI nr
Match: XP_004150019.1 (uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >XP_022144816.1 uncharacterized protein At2g34160-like [Momordica charantia] >XP_038878653.1 uncharacterized protein At2g34160-like [Benincasa hispida] >KAA0046788.1 Alba domain-containing protein [Cucumis melo var. makuwa] >KGN65316.1 hypothetical protein Csa_020079 [Cucumis sativus] >TYK29659.1 Alba domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++I LTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSITLTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. NCBI nr
Match: XP_022987902.1 (uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++IALTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSIALTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAA E
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAEE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. NCBI nr
Match: XP_022972044.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 3.0e-55
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++IALTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 4   MEEITEGVNSIALTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 63

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 64  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 123

Query: 121 EREKEDGEEQS 132
           ERE  DGEEQS
Sbjct: 124 ERENGDGEEQS 133

[Close]
BLAST of Sed0001424 vs. NCBI nr
Match: XP_022924689.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG7021810.1 hypothetical protein SDJN02_15538 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.3 bits (573), Expect = 3.0e-55
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++IALTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSIALTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE  DGEEQS
Sbjct: 121 ERENGDGEEQS 130

[Close]
BLAST of Sed0001424 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.3e-47
Identity = 103/131 (78.63%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEIT+GV+ + L  D SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIA
Sbjct: 1   MEEITDGVNNMNLATD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+V EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIE+ L K+E FDELMAAA E
Sbjct: 61  TVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANE 120

Query: 121 EREKEDGEEQS 132
           E+E  + + Q+
Sbjct: 121 EKEDAEAQVQN 130

[Close]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match: A0A6J1HAY2 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111461689 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++IALTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSIALTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match: A0A5A7TV88 (Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00010 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++I LTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSITLTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match: A0A0A0LZB6 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++I LTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSITLTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match: A0A6J1CUJ0 (uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC111014408 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++I LTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSITLTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match: A0A1S3B8Y2 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV++I LTAD SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA
Sbjct: 1   MEEITEGVNSITLTAD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIE+VLGKTENFDELMAAAAE
Sbjct: 61  TVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAE 120

Query: 121 EREKEDGEEQS 132
           ERE EDGEEQS
Sbjct: 121 ERENEDGEEQS 130

[Close]
BLAST of Sed0001424 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-49
Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEITEGV+ + L  D +QKKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIA
Sbjct: 1   MEEITEGVNNMNLAVD-TQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+VAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKIE+ L K+E FDELMAAA E
Sbjct: 61  TVVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANE 120

Query: 121 EREKEDGEEQS 132
           E+E  + +EQ+
Sbjct: 121 EKEAAEAQEQN 130

[Close]
BLAST of Sed0001424 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.8e-48
Identity = 103/131 (78.63%), Postives = 116/131 (88.55%), Query Frame = 0 

Query: 1   MEEITEGVSAIALTADSSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIA 60
           MEEIT+GV+ + L  D SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIA
Sbjct: 1   MEEITDGVNNMNLATD-SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIA 60

Query: 61  TVVSVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAE 120
           TVV+V EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIE+ L K+E FDELMAAA E
Sbjct: 61  TVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANE 120

Query: 121 EREKEDGEEQS 132
           E+E  + + Q+
Sbjct: 121 EKEDAEAQVQN 130

[Close]
BLAST of Sed0001424 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 148.3 bits (373), Expect = 4.4e-36
Identity = 75/109 (68.81%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 18  SQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVSVAEILKNNGLALE 77
           + KKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVV+++EILKNNGLA E
Sbjct: 34  THKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATE 93

Query: 78  KKIMTSTVDIKDDSRGRPVQKAKIEVVLGKTENFDELMAAAAEEREKED 127
           KK++TSTV +KD+++G+ VQKAKIE+VLGK++ FD L+      +  E+
Sbjct: 94  KKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEE 142

The following BLAST results are available for this feature:
BLAST of Sed0001424 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961070.14.6e-5695.42uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 unch... [more]
XP_004150019.11.4e-5594.66uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: u... [more]
XP_022987902.11.8e-5594.66uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 unchar... [more]
XP_022972044.13.0e-5594.66uncharacterized protein At2g34160-like [Cucurbita maxima][more]
XP_022924689.13.0e-5594.66uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 unch... [more]
BLAST of Sed0001424 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O229695.3e-4778.63Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P... [more]
BLAST of Sed0001424 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAY22.2e-5695.42uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
A0A5A7TV886.5e-5694.66Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0LZB66.5e-5694.66Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 S... [more]
A0A6J1CUJ06.5e-5694.66uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A1S3B8Y26.5e-5694.66uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 P... [more]
BLAST of Sed0001424 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G29250.12.0e-4980.15Alba DNA/RNA-binding protein [more]
AT2G34160.13.8e-4878.63Alba DNA/RNA-binding protein [more]
AT3G04620.14.4e-3668.81Alba DNA/RNA-binding protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 20..131
e-value: 3.9E-56
score: 189.9
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 21..116
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 22..75
e-value: 8.7E-13
score: 47.9
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPIRSFPIRSF030333UCP030333_Albacoord: 1..131
e-value: 1.4E-63
score: 211.3
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPANTHERPTHR31947DNA/RNA-BINDING PROTEIN ALBA 3coord: 1..131
NoneNo IPR availablePANTHERPTHR31947:SF32SUBFAMILY NOT NAMEDcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001424.1Sed0001424.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding