Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAACCACTTTTGTGGGTCAACACAATTAAGCCGGAGTCCGGGCCCGGCGTCGGTGATTTTGATTGGCCGGAGAAAGCATCAGACATTCCATCAAATCTGCAAACAAACAATCTTCAACCACAAAGGCCATAAACATTACAATTCATTTGCATATAAAATCCCTTTCTGTCTCTTCTGATTCTCAATCCTCTGTTTGTGATTTTGGAATCAGCAATGAGTTTCTCATCCAATCCACTCGCCCTCAGCGTTCCAGACCCGACCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGACCACCGCACCTCCGCCGCCGCCGCCACCGCCGCCTCTGCCCCCACCACACCCACCTGCTCCGCCCCTTTAGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCATCGGAACCCTTCTCTCTGTTTTCACTGTTAACCCCTTTTCTAAGCTCTCCACTGCGGATTTTTCTGGGCCGACCCCATCCTGGACTTCTGGGTTTGTTGGGTTTTTCGAGTCTTATTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTAAGAGTCCATGAGAATGCCAAACGCTATGCTCGCAACTACGTTTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCCTCTTTCTCTCTCGTTATTTGTGTTCATGGATGGGGGTTTGTGTTAGTGATATGTTGTTTTTCATGGGCGTTGCCAATTGGGTTATGTTTGGTTTTATGTGAATTTCGGGGAAGATTACAAGCTACGGGAAATTCGATTTGTTATATGCATTTGCTTTAGATACGGTGATGGGTTTAGTGGTTTGATTGGATTCTTGAAGTCTACTCTAATGGTGTTACTGGGTTGTTATGATGTTCATGTCCCCCTCTCTTTTAAGTTTAAATTGTTTTGCGGATAATTTTCAGGTACCAGATGCCTCTTTCCCTTCTTGGGTTGATATCATGTTTAGCACTTTGGGATGTTGTTAAGTTTTGTGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGCTTGGTTCGAATTGCTCAATGTGGTAAGTTATTGACGTTTTAAGTGAGACCATGTTCATTTACAGTTAATTACACATCTCAGAATATCTTCCAGATTCATCTTTTTAAACCCATGTACTAATTGAACCAATTTAGTTCCACCCACAGAAATTCACTTGAAAAATTTATACACCTACTTTCAGACATCAGTAGATATACTGAGTAATTGCTGCTTGTTGAATGGTTCTTGTTTTTTCTGGTTCCATTTTACAAGCTAAAGGCTATCGTTTCCTCAATTCAAGATGATTGATAACGTTAGCTCAGTTGTTCTGCATTTTGCGAATTGAGCCTATGTGTTAGTCCCCCAACGGGTAGCCTCGATGGTTGATGTTTGGGGCTTTCAAGGCATACTTACTTGGAGGTCTCAGGTTCAAGACCCACATAAGCTTAATTGTAAAATCTCTTGTTGTCTCTTGGGTCTGGAATAGATGCGGGTGCACCTATCTTAGGTATAGAGGCTCAAAGCTTCGATTTTCTGATTTAAAAAAAAAAAAAAATTGAGCCAATGTGTTGCCTGAGTGGGCAGCAGAAGCATAATAATGCCTGCATGACTGATCTTTTAAGAGTTTTACATACTACTTCAGATTGCTATTTCAACTTATTAGTTTTGGACCTAGTGTTGAAGGACTTTAACTAAGAGGTGATGAGTAATCCATGGTGGCCGCCTATTTAGGAATTAATTTCCTACGAGTTTCTTTGACATCCAAATTGTAGGGTTAAGCAGTTTGTCATGTGACAATAATCGAGGTGCACACAAGTTAGTCTAAATAGTCATGGATATAAAAAAAAAAAAAGTTTTAGATTCTTTTCGAGTCAGCTTCTGCTGGATCCTTCTATGTATTTATCAATCAATTCGCATGATCTTGCAATTGTTTGAAAAGCTATTCTTAGTTAATTACATTAGGAATCTTAATAAACCCAATTTTGATCCCAATACTTAAACAAGTATAATGTTTTGCAGTGACTGTCATCATCCTTATATTTTCCAACTTTCAAATGGCAATCTTCTATGCATTTGGCATTGGATATGCAGGTGATCCAAAACATTTCTATTCATAGATTTCAGAGTTCTTCTTATCAGTCTTTTCTTATCGTTTGAAATCTTGGCAGGCATGATTTTGCATGCTGCATTTCGAAAGCTGACTCTTGCGAAGCCCCCATCTACTGGAAGTCGAAAATAGCCAGCTAAAGACAACATATTTGTAATCTTCTATGTTCGAGCAAGCTTACTGCAAAGTATTATGTGACGAGACGAAAAAATGCTTGGTAATGCTATGCTCCTTTGAATGCTGTGCTTGCTTGAAAGCATGGCTGATGTCCTGCAAGGGGCACCATCCTATTGCCCAAGAGTTCCAGGTTTAATCTTCCTGTGTTAGAGCCAATTATAGCCAGTCAAGTTCAAATCATGTTGAATTAGTTTGTTCAGTTAGTTTCTTTGTATTAAGTGTGGGTAGTTTGTAGGTTATATTATTATTACATGATATTTAGTTTCAGTTTGCGACTTGTCGTGCTCACATTTTCGATTAGTGATAGTTCAACAAGTTGTAAGAGAGACCAGTTCATTACTTACTACTAGGCTTTATACTGACAATTTTATTCTTTGAAAGATTGAGCAATCTGAAGCATACCCCATTTTTCTTACTTCTAAAAGCATGTTATTGTTGAGCCTCTTCTTAAAGAATATACTCTTTGAAATTTGATTGGGGGTAAAGTTCATCACTTTTCTACCCTTC
mRNA sequence
AAGAAAACCACTTTTGTGGGTCAACACAATTAAGCCGGAGTCCGGGCCCGGCGTCGGTGATTTTGATTGGCCGGAGAAAGCATCAGACATTCCATCAAATCTGCAAACAAACAATCTTCAACCACAAAGGCCATAAACATTACAATTCATTTGCATATAAAATCCCTTTCTGTCTCTTCTGATTCTCAATCCTCTGTTTGTGATTTTGGAATCAGCAATGAGTTTCTCATCCAATCCACTCGCCCTCAGCGTTCCAGACCCGACCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGACCACCGCACCTCCGCCGCCGCCGCCACCGCCGCCTCTGCCCCCACCACACCCACCTGCTCCGCCCCTTTAGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCATCGGAACCCTTCTCTCTGTTTTCACTGTTAACCCCTTTTCTAAGCTCTCCACTGCGGATTTTTCTGGGCCGACCCCATCCTGGACTTCTGGGTTTGTTGGGTTTTTCGAGTCTTATTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTAAGAGTCCATGAGAATGCCAAACGCTATGCTCGCAACTACGTTTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTTCCCTTCTTGGGTTGATATCATGTTTAGCACTTTGGGATGTTGTTAAGTTTTGTGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGCTTGGTTCGAATTGCTCAATGTGTGACTGTCATCATCCTTATATTTTCCAACTTTCAAATGGCAATCTTCTATGCATTTGGCATTGGATATGCAGGCATGATTTTGCATGCTGCATTTCGAAAGCTGACTCTTGCGAAGCCCCCATCTACTGGAAGTCGAAAATAGCCAGCTAAAGACAACATATTTGTAATCTTCTATGTTCGAGCAAGCTTACTGCAAAGTATTATGTGACGAGACGAAAAAATGCTTGGTAATGCTATGCTCCTTTGAATGCTGTGCTTGCTTGAAAGCATGGCTGATGTCCTGCAAGGGGCACCATCCTATTGCCCAAGAGTTCCAGGTTTAATCTTCCTGTGTTAGAGCCAATTATAGCCAGTCAAGTTCAAATCATGTTGAATTAGTTTGTTCAGTTAGTTTCTTTGTATTAAGTGTGGGTAGTTTGTAGGTTATATTATTATTACATGATATTTAGTTTCAGTTTGCGACTTGTCGTGCTCACATTTTCGATTAGTGATAGTTCAACAAGTTGTAAGAGAGACCAGTTCATTACTTACTACTAGGCTTTATACTGACAATTTTATTCTTTGAAAGATTGAGCAATCTGAAGCATACCCCATTTTTCTTACTTCTAAAAGCATGTTATTGTTGAGCCTCTTCTTAAAGAATATACTCTTTGAAATTTGATTGGGGGTAAAGTTCATCACTTTTCTACCCTTC
Coding sequence (CDS)
ATGAGTTTCTCATCCAATCCACTCGCCCTCAGCGTTCCAGACCCGACCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGACCACCGCACCTCCGCCGCCGCCGCCACCGCCGCCTCTGCCCCCACCACACCCACCTGCTCCGCCCCTTTAGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCATCGGAACCCTTCTCTCTGTTTTCACTGTTAACCCCTTTTCTAAGCTCTCCACTGCGGATTTTTCTGGGCCGACCCCATCCTGGACTTCTGGGTTTGTTGGGTTTTTCGAGTCTTATTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTAAGAGTCCATGAGAATGCCAAACGCTATGCTCGCAACTACGTTTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTTCCCTTCTTGGGTTGATATCATGTTTAGCACTTTGGGATGTTGTTAAGTTTTGTGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGCTTGGTTCGAATTGCTCAATGTGTGACTGTCATCATCCTTATATTTTCCAACTTTCAAATGGCAATCTTCTATGCATTTGGCATTGGATATGCAGGCATGATTTTGCATGCTGCATTTCGAAAGCTGACTCTTGCGAAGCCCCCATCTACTGGAAGTCGAAAATAG
Protein sequence
MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTSAAAATAASAPTTPTCSAPLATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPVVWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK
Homology
BLAST of Sed0001385 vs. NCBI nr
Match:
KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 202/238 (84.87%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TP APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A G+GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. NCBI nr
Match:
XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 202/238 (84.87%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TPT APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A +GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALAVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. NCBI nr
Match:
XP_022976569.1 (PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976572.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976573.1 PRA1 family protein H-like [Cucurbita maxima])
HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 202/238 (84.87%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TPT APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A G+GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. NCBI nr
Match:
XP_022935725.1 (PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935727.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935728.1 PRA1 family protein H-like [Cucurbita moschata])
HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106
Identity = 201/238 (84.45%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TP APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A G+GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. NCBI nr
Match:
XP_038898448.1 (PRA1 family protein H [Benincasa hispida])
HSP 1 Score: 394.8 bits (1013), Expect = 5.1e-106
Identity = 202/238 (84.87%), Postives = 215/238 (90.34%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFS NPL+LSVPD FDSWLRDSGYLEILD RTS ++A AA+APT TP +APL
Sbjct: 1 MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFISLFSR+GTLLS+FT+NPF+KLS ADFSGPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGLISCLALWDVVKFCGDRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
+WQCLVRIAQCVTVIIL+F NFQMAIF A GIGY GMILHAAFRKLTL KPP+ SRK
Sbjct: 181 LWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTGMILHAAFRKLTLTKPPAAVSRK 238
BLAST of Sed0001385 vs. ExPASy Swiss-Prot
Match:
Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 5.5e-71
Identity = 135/240 (56.25%), Postives = 175/240 (72.92%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTSAAAATAASAPTTPTCSA-------- 60
M+FS NPL+LSVPDP F+SWLRDSGYLE+LDHRTSAAAA A+S+ + + +A
Sbjct: 1 MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60
Query: 61 ---PLATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSS 120
+ GFF SL SR+ T+ S+ T+NPFSKLS DFSG T WT+GF+G +SYSFPSS
Sbjct: 61 VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120
Query: 121 PAQARLRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGL 180
QAR+RVHEN KR+ARNY +LF++FF C LYQMPL+L+GL+ LALW++ K+C D+W
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180
Query: 181 DKYPVVWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTG 230
D++P + + + I QC T ++L F N QMA+F A I Y+ MILHA FRKLT +K P+ G
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPTRG 240
BLAST of Sed0001385 vs. ExPASy TrEMBL
Match:
A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 5.0e-107
Identity = 202/238 (84.87%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TPT APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A G+GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. ExPASy TrEMBL
Match:
A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 1.4e-106
Identity = 201/238 (84.45%), Postives = 217/238 (91.18%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS----AAAATAASAPT--TPTCSAPL 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS ++ATAA+APT TP APL
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60
Query: 61 ATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
ATGFFIS FSRIGTLLSVFT+NPF+KLS ADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61 ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120
Query: 121 LRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPV 180
LRVHENAKRYARNY SLFVLFFVCTLYQMPL+LLGL+SCLALWD+VKFCGDRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180
Query: 181 VWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VWQCLVRIAQCVTVIIL+FSNFQMAIF A G+GY GMILHAAFRKLTL +PPS+ +RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238
BLAST of Sed0001385 vs. ExPASy TrEMBL
Match:
A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)
HSP 1 Score: 390.6 bits (1002), Expect = 4.6e-105
Identity = 200/235 (85.11%), Postives = 210/235 (89.36%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTSAAAATAASAP---TTPTCSAPLATG 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS +++AP TPT +APLATG
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
Query: 61 FFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
FFISLFSRI TLLSVFT+NPFSKLS ADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61 FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
Query: 121 HENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPVVWQ 180
HENAKRYARNY SLFVLFFVCTLYQMPL+LLGLISCLALWD+VKFC DRWGLDKYPV+WQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
Query: 181 CLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
CLVRIAQC T IIL+FSNFQMAIF A GIGY GMILHAAFRKLT KPPST SRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235
BLAST of Sed0001385 vs. ExPASy TrEMBL
Match:
A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)
HSP 1 Score: 386.7 bits (992), Expect = 6.7e-104
Identity = 197/235 (83.83%), Postives = 210/235 (89.36%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTSAAAATAASAP---TTPTCSAPLATG 60
MSFSSNPL+LSVPD FDSWLRDSGYLEILD RTS +++AP TPT +APLATG
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
Query: 61 FFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
FFISLFSRI TLLS+FT+NPF+KLS ADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61 FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
Query: 121 HENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYPVVWQ 180
HENAKRYARNY SLFVLFFVCTLYQMPL+LLGLISCLALWD+VKFC DRWGLDKYPV+WQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
Query: 181 CLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
CLVRIAQC TVIIL+FSNFQMAIF A GIGY GMILHAAFRKLT KP ST SRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235
BLAST of Sed0001385 vs. ExPASy TrEMBL
Match:
A0A6J1FMA4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1)
HSP 1 Score: 386.7 bits (992), Expect = 6.7e-104
Identity = 198/239 (82.85%), Postives = 214/239 (89.54%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTS-----AAAATAASAPTTPTC--SAP 60
MSFS NPL+LSVPD FDSWLRDSGYLEI+D RTS ++AA AA+AP T T + P
Sbjct: 1 MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTP 60
Query: 61 LATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSSPAQA 120
LATGFFISLFSRI TLLS+FT+NPF+KLS ADFSGPTPSWTSGF+G FESYSFPSSPAQA
Sbjct: 61 LATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
Query: 121 RLRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGLDKYP 180
RLR HENAKRYARNY SLFVLFFVCTLYQMP++LLGLISC+ALWDVVKFC +RWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180
Query: 181 VVWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTGSRK 233
VVWQCLVR+AQCVTVIIL+FSNFQMAIF A GIGY GMILHAAFRKLTLAKPPSTGSRK
Sbjct: 181 VVWQCLVRVAQCVTVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTLAKPPSTGSRK 239
BLAST of Sed0001385 vs. TAIR 10
Match:
AT4G27540.1 (prenylated RAB acceptor 1.H )
HSP 1 Score: 268.9 bits (686), Expect = 3.9e-72
Identity = 135/240 (56.25%), Postives = 175/240 (72.92%), Query Frame = 0
Query: 1 MSFSSNPLALSVPDPTFDSWLRDSGYLEILDHRTSAAAATAASAPTTPTCSA-------- 60
M+FS NPL+LSVPDP F+SWLRDSGYLE+LDHRTSAAAA A+S+ + + +A
Sbjct: 1 MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60
Query: 61 ---PLATGFFISLFSRIGTLLSVFTVNPFSKLSTADFSGPTPSWTSGFVGFFESYSFPSS 120
+ GFF SL SR+ T+ S+ T+NPFSKLS DFSG T WT+GF+G +SYSFPSS
Sbjct: 61 VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120
Query: 121 PAQARLRVHENAKRYARNYVSLFVLFFVCTLYQMPLSLLGLISCLALWDVVKFCGDRWGL 180
QAR+RVHEN KR+ARNY +LF++FF C LYQMPL+L+GL+ LALW++ K+C D+W
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180
Query: 181 DKYPVVWQCLVRIAQCVTVIILIFSNFQMAIFYAFGIGYAGMILHAAFRKLTLAKPPSTG 230
D++P + + + I QC T ++L F N QMA+F A I Y+ MILHA FRKLT +K P+ G
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPTRG 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6591944.1 | 1.0e-106 | 84.87 | PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248... | [more] |
XP_023535020.1 | 1.0e-106 | 84.87 | PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 fam... | [more] |
XP_022976569.1 | 1.0e-106 | 84.87 | PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protei... | [more] |
XP_022935725.1 | 3.0e-106 | 84.45 | PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family prot... | [more] |
XP_038898448.1 | 5.1e-106 | 84.87 | PRA1 family protein H [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q8LFP1 | 5.5e-71 | 56.25 | PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IMK5 | 5.0e-107 | 84.87 | PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1 | [more] |
A0A6J1F5I6 | 1.4e-106 | 84.45 | PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1 | [more] |
A0A1S3CLE4 | 4.6e-105 | 85.11 | PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1 | [more] |
A0A0A0L4P4 | 6.7e-104 | 83.83 | PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1 | [more] |
A0A6J1FMA4 | 6.7e-104 | 82.85 | PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G27540.1 | 3.9e-72 | 56.25 | prenylated RAB acceptor 1.H | [more] |