Sed0001377 (gene) Chayote v1

Overview


Name	Sed0001377
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG14: 23798355 .. 23799675 (-)
RNA-Seq Expression	Sed0001377
Synteny	Sed0001377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACATATTACTCATAGAAGTGAGAATTCAGCCTAGTTTACTACACATATTATCTACACAGTAATGCCTAAAATAGCAAATGACAAGTAGGCATCCAATTCTCTCTAGATATTGGTGATATCAACAACACACGTGTCAAAATTTGATTGGAGAAAAGAGAAACCCATGAAGTTGCCTAAGATTTTTTGGCCTTGAAGGATAAGAGTGGCACAGAGAATGGCGCTTGGAGTAAGCCTGTAAAGAAACCATACAAATTTCAACCAATAAGAAAGCTGATATTGATTTTCCTGGATAACAACCCTACCCCAAAATCCATGTATATTAAGCTCCATCATTCTACTTCTTTCTCACCACAAAACACAATCTCCTCATCAATCAAACAGCTCATTCTAAGCTTCATCAATGGCTGCCTCAACAATGGCTCTCTCTTCCCCATCTCTGGCTGGCCAGGCCATCAAGCTCTCCCCCAATGCCTCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCGGCAGGAAGCCAGCTCCCTCCAGCTCCGGCAGCCCGTGGTACGGCCCCGACCGTGTCAAGTACTTGGGACCATTCTCTGGCGAGGCACCATCATACCTCACCGGTGAATTCCCTGGCGACTATGGCTGGGACACTGCTGGACTTTCCGCTGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTCTTGGCTGTGTCTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGAAACTCCAGCTTGGTCCATGCACAGAGCATTTTGGCCATCTGGGCCTGCCAGGTTGTGTTGATGGGTGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATCACCGACCCCATCTACCCCGGTGGAAGCTTTGACCCGTTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTCAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTTTGCCACCAACTTTGTCCCTGGAAAGTGAGGAATTGAAACATGTTAAAACGAGAGATTACATAGAGAGAGAGGGAGTTTCTATGGCGATGAATTATTATTGGTGTACATTAGTTGAAATTCAATGAAGTACTTTTGTGTGG

mRNA sequence

GGACATATTACTCATAGAAGTGAGAATTCAGCCTAGTTTACTACACATATTATCTACACAGTAATGCCTAAAATAGCAAATGACAAGTAGGCATCCAATTCTCTCTAGATATTGGTGATATCAACAACACACGTGTCAAAATTTGATTGGAGAAAAGAGAAACCCATGAAGTTGCCTAAGATTTTTTGGCCTTGAAGGATAAGAGTGGCACAGAGAATGGCGCTTGGAGTAAGCCTGTAAAGAAACCATACAAATTTCAACCAATAAGAAAGCTGATATTGATTTTCCTGGATAACAACCCTACCCCAAAATCCATGTATATTAAGCTCCATCATTCTACTTCTTTCTCACCACAAAACACAATCTCCTCATCAATCAAACAGCTCATTCTAAGCTTCATCAATGGCTGCCTCAACAATGGCTCTCTCTTCCCCATCTCTGGCTGGCCAGGCCATCAAGCTCTCCCCCAATGCCTCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCGGCAGGAAGCCAGCTCCCTCCAGCTCCGGCAGCCCGTGGTACGGCCCCGACCGTGTCAAGTACTTGGGACCATTCTCTGGCGAGGCACCATCATACCTCACCGGTGAATTCCCTGGCGACTATGGCTGGGACACTGCTGGACTTTCCGCTGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTCTTGGCTGTGTCTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGAAACTCCAGCTTGGTCCATGCACAGAGCATTTTGGCCATCTGGGCCTGCCAGGTTGTGTTGATGGGTGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATCACCGACCCCATCTACCCCGGTGGAAGCTTTGACCCGTTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTCAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTTTGCCACCAACTTTGTCCCTGGAAAGTGAGGAATTGAAACATGTTAAAACGAGAGATTACATAGAGAGAGAGGGAGTTTCTATGGCGATGAATTATTATTGGTGTACATTAGTTGAAATTCAATGAAGTACTTTTGTGTGG

Coding sequence (CDS)

ATGGCTGCCTCAACAATGGCTCTCTCTTCCCCATCTCTGGCTGGCCAGGCCATCAAGCTCTCCCCCAATGCCTCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCGGCAGGAAGCCAGCTCCCTCCAGCTCCGGCAGCCCGTGGTACGGCCCCGACCGTGTCAAGTACTTGGGACCATTCTCTGGCGAGGCACCATCATACCTCACCGGTGAATTCCCTGGCGACTATGGCTGGGACACTGCTGGACTTTCCGCTGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTCTTGGCTGTGTCTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGAAACTCCAGCTTGGTCCATGCACAGAGCATTTTGGCCATCTGGGCCTGCCAGGTTGTGTTGATGGGTGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATCACCGACCCCATCTACCCCGGTGGAAGCTTTGACCCGTTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTCAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTTTGCCACCAACTTTGTCCCTGGAAAGTGA

Protein sequence

MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

Homology

[Close]

BLAST of Sed0001377 vs. NCBI nr
Match: XP_008456347.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0054604.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK27568.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.0e-143
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP AS++ G GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. NCBI nr
Match: XP_038901990.1 (chlorophyll a-b binding protein of LHCII type 1 [Benincasa hispida])

HSP 1 Score: 516.9 bits (1330), Expect = 1.0e-142
Identity = 252/268 (94.03%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP AS++ G+GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGDGRITMRKTAG-KPKPISSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. NCBI nr
Match: XP_004145734.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN46826.1 hypothetical protein Csa_020847 [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 1.7e-142
Identity = 252/268 (94.03%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPS AGQA+KLSP AS++ G GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. NCBI nr
Match: KAG6570576.1 (hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.2 bits (1323), Expect = 6.6e-142
Identity = 251/268 (93.66%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP+AS++ G  RV+MRKT GR P P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPSASDILGESRVTMRKTGGR-PKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. NCBI nr
Match: XP_008439658.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0052560.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK13266.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 514.2 bits (1323), Expect = 6.6e-142
Identity = 250/268 (93.28%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSPSLAG+A+KLSPNA E+QG GR++MRKTA +   P SSGSPWYGPDRVKY
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATK---PVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.0e-142
Identity = 244/268 (91.04%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MA STMALSS + AG+A+KLSP++SE+ GNGRV+MRKTA  K  P+SSGSPWYGPDRVKY
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTA-TKAKPASSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.6e-141
Identity = 242/268 (90.30%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSPS AG+A+KLSP++SE+ GNG+V+MRKTA  K    SSGSPWYGPDRVKY
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTAS-KAKTVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 3.4e-141
Identity = 245/268 (91.42%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAA+TMALSSPS AGQA+KLSP+ASE+ GNGR++MRK A  K APSS  SPWYGPDRVKY
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRK-AVAKSAPSS--SPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot
Match: P12333 (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.5e-141
Identity = 242/268 (90.30%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MA+STMALSSPSLAG+A+KL P ASE+ G GR++MRKTAG KP    S SPWYGPDRVKY
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAG-KPKTVQSSSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQV+LMGAVEGYRIA
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAW FATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.8e-141
Identity = 240/268 (89.55%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAA+TMALSSPS AGQA+KLSP+A E+ GNGRVSMRKT  +   P +S SPWYGPDRVKY
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAK---PVASSSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0001377 vs. ExPASy TrEMBL
Match: A0A5D3DVR3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00410 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP AS++ G GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy TrEMBL
Match: A0A1S3C301 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496313 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 253/268 (94.40%), Postives = 260/268 (97.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP AS++ G GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy TrEMBL
Match: A0A0A0KGD7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G139750 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.5e-143
Identity = 252/268 (94.03%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPS AGQA+KLSP AS++ G GR++MRKTAG KP P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. ExPASy TrEMBL
Match: A0A5A7UBM9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008840 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 250/268 (93.28%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSPSLAG+A+KLSPNA E+QG GR++MRKTA +   P SSGSPWYGPDRVKY
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATK---PVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 PLENLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Sed0001377 vs. ExPASy TrEMBL
Match: A0A6J1FVQ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448911 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142
Identity = 251/268 (93.66%), Postives = 259/268 (96.64%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAAS+MALSSPSLAGQA+KLSP+AS++ G  RV+MRKT GR P P SSGSPWYGPDRVKY
Sbjct: 1   MAASSMALSSPSLAGQAVKLSPSASDILGESRVTMRKTGGR-PKPVSSGSPWYGPDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHAQSILAIWACQVVLMGAVEGYRIA
Sbjct: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIA 180

Query: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240
           GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWAFATNFVPGK 269
           PLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 481.9 bits (1239), Expect = 3.4e-136
Identity = 237/269 (88.10%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSP+ AG+A+KLSP ASEV G+GRV+MRKT  +   P  SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGP--SGSPWYGSDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN SLVHAQSILAIWA QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269
           GP+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-135
Identity = 236/269 (87.73%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSP+ AG+A+ LSP ASEV G+GRV+MRKT  +   P  SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGP--SGSPWYGSDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN SLVHAQSILAIWA QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269
           GP+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-135
Identity = 236/269 (87.73%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSP+ AG+A+ LSP ASEV G+GRV+MRKT  +   P  SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGP--SGSPWYGSDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE+PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN SLVHAQSILAIWA QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269
           GP+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Sed0001377 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-134
Identity = 237/269 (88.10%), Postives = 249/269 (92.57%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MAASTMALSSP+L G+A+KLSP ASEV G GR++MRK +  KP    SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKAS--KPT-GPSGSPWYGSDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN SLVHAQSILAIWA QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Sed0001377 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-133
Identity = 234/269 (86.99%), Postives = 248/269 (92.19%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKY 60
           MA+STMALSSP+ AG+A+K  P AS+V G+GRV+MRKT  +   P  SGSPWYG DRVKY
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGP--SGSPWYGSDRVKY 60

Query: 61  LGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGN SLVHAQSILAIWA QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 269
           GPLENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Sed0001377 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456347.1	6.0e-143	94.40	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]
XP_038901990.1	1.0e-142	94.03	chlorophyll a-b binding protein of LHCII type 1 [Benincasa hispida]	[more]
XP_004145734.1	1.7e-142	94.03	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN46826...	[more]
KAG6570576.1	6.6e-142	93.66	hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008439658.1	6.6e-142	93.28	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]

BLAST of Sed0001377 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P07369	4.0e-142	91.04	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27495	2.6e-141	90.30	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07370	3.4e-141	91.42	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P12333	4.5e-141	90.30	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1...	[more]
P27493	5.8e-141	89.55	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]

BLAST of Sed0001377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DVR3	2.9e-143	94.40	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C301	2.9e-143	94.40	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KGD7	8.5e-143	94.03	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7UBM9	3.2e-142	93.28	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1FVQ6	3.2e-142	93.66	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Sed0001377 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29930.1	3.4e-136	88.10	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.3e-135	87.73	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.3e-135	87.73	chlorophyll A/B-binding protein 2	[more]
AT2G34430.1	1.4e-134	88.10	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	3.5e-133	86.99	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 59..261 e-value: 4.8E-90 score: 302.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 68..234 e-value: 1.4E-49 score: 168.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..268
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 51..265
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001377.1	Sed0001377.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding