Sed0001349 (gene) Chayote v1

Overview
NameSed0001349
Typegene
OrganismSechium edule (Chayote v1)
DescriptionEthylene-responsive transcription factor
LocationLG09: 3089837 .. 3091074 (+)
RNA-Seq ExpressionSed0001349
SyntenySed0001349
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAAAATTCGAGTGGAAATAGATTTAAATTTCAAAAACAAAAAATAAAAAACCAAATAGTTATCAAACTTGGGTCTAAATTATCATCGAACAATGAAACCATATATTAATCACATTTGTAATTTATTCTAAATATTAAAAATAAATGTAAGGAGGAGAAACATCGAGCGCTGTTTGTTTGGCATCTTTAGGTAGAATTTAGTTTTAGGATTTATTAACTCCTCCTCGAAAACCTACATCCAAACGAGATTTTATTAACTCTCCTATTTTTACTTTTAAAAATAACACTCATTTCTAACCATTCATTTTTAATCATTCATTTATAATTACCCAATTATTTATAACCACTCATTTTTAATCATTTGTTTCATATCAATCAAAATAACTCATTTTTAACGGTTCATTTTTAATAATGTCTTTTTTTAACTACTAAAAATAACTACTCATTTTTAAATCTACCTCCAAACAAGATTTTGACTCTAACTCTTCTACATAAAAACTACATTCAAAGTGAGTGTTTGACATAAATCTTAATTTTTAATTACTCAGTATAACTCTTTAATATAACTTCTTAACCCAACCTAAATATTACTTAAATATGTCAAACAAATAGCTCCTGGATCTGTCCCTATATATAGATATAGTAGCACAGGCTCTTGCACATGCACTCATTGAATTATATTCCAATTGAGCAAAAACTTAGAATTAATTCTCCCACCAATTTTCATCTCCCTTTTATCTCATAATCCACAGAAATTATTTTCATATAATGTCAGAAGATGCAGGGAGGAAGCCACATTACAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCAGCCGAGATTCGCGACCCGAAGAAAGCCGCTCGAGTCTGGCTCGGCACTTTCGAAACCGCCGAGGCTGCAGCCATTGCCTACGACAATGCCGCATTGAGGTTCAAAGGCACCAAAGCCAAGCTCAATTTCCCCGAGCGGGTTCAATTCAGCCCTACTGCCGCCGCCGCCGCTGCCCCGCCTGCTGTGGCGCCGCTGCAGTTGTCGCCCGAAGAAGGCTTCCCTGGACTTGAGCAGTACGCTCAACTTCTTTCGGGCAACGACGCGGATTTCGCGTATTACTGTTCTACTCTTCTTCATCAACAACCTCATTACGATTTCTCTTCTTCCTCGAGCCAGCAGCACCAAGATCATAGCCATTATGGAAATGATTTTGGTGCTGGTGGCTCAAGCTATTGA

mRNA sequence

ATGGTAGAAAATTCGAGTGGAAATAGATTTAAATTTCAAAAACAAAAAATAAAAAACCAAATAGTTATCAAACTTGGGAAGCCACATTACAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCAGCCGAGATTCGCGACCCGAAGAAAGCCGCTCGAGTCTGGCTCGGCACTTTCGAAACCGCCGAGGCTGCAGCCATTGCCTACGACAATGCCGCATTGAGGTTCAAAGGCACCAAAGCCAAGCTCAATTTCCCCGAGCGGGTTCAATTCAGCCCTACTGCCGCCGCCGCCGCTGCCCCGCCTGCTGTGGCGCCGCTGCAGTTGTCGCCCGAAGAAGGCTTCCCTGGACTTGAGCAGTACGCTCAACTTCTTTCGGGCAACGACGCGGATTTCGCGTATTACTGTTCTACTCTTCTTCATCAACAACCTCATTACGATTTCTCTTCTTCCTCGAGCCAGCAGCACCAAGATCATAGCCATTATGGAAATGATTTTGGTGCTGGTGGCTCAAGCTATTGA

Coding sequence (CDS)

ATGGTAGAAAATTCGAGTGGAAATAGATTTAAATTTCAAAAACAAAAAATAAAAAACCAAATAGTTATCAAACTTGGGAAGCCACATTACAGAGGCGTGAGACAAAGACCATGGGGGAAATGGGCAGCCGAGATTCGCGACCCGAAGAAAGCCGCTCGAGTCTGGCTCGGCACTTTCGAAACCGCCGAGGCTGCAGCCATTGCCTACGACAATGCCGCATTGAGGTTCAAAGGCACCAAAGCCAAGCTCAATTTCCCCGAGCGGGTTCAATTCAGCCCTACTGCCGCCGCCGCCGCTGCCCCGCCTGCTGTGGCGCCGCTGCAGTTGTCGCCCGAAGAAGGCTTCCCTGGACTTGAGCAGTACGCTCAACTTCTTTCGGGCAACGACGCGGATTTCGCGTATTACTGTTCTACTCTTCTTCATCAACAACCTCATTACGATTTCTCTTCTTCCTCGAGCCAGCAGCACCAAGATCATAGCCATTATGGAAATGATTTTGGTGCTGGTGGCTCAAGCTATTGA

Protein sequence

MVENSSGNRFKFQKQKIKNQIVIKLGKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPERVQFSPTAAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGNDADFAYYCSTLLHQQPHYDFSSSSSQQHQDHSHYGNDFGAGGSSY
Homology
[Close]
BLAST of Sed0001349 vs. NCBI nr
Match: XP_022991755.1 (ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima])

HSP 1 Score: 214.2 bits (544), Expect = 9.2e-52
Identity = 119/165 (72.12%), Postives = 125/165 (75.76%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 83  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 142

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQ----------LSPEEGFPGLEQYAQLLSGN 146
           ERVQ +P        T  AAAAP  VA L           L  EE FPGL+QYAQLLS  
Sbjct: 143 ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSVALLPPLPQEEAFPGLQQYAQLLSST 202

Query: 147 DADFAYYCSTLLHQQPHYDFSSSSSQ-QHQDHSHYGNDFGAGGSS 173
           DADF YY STLL+QQPHY FSSS S  + QDH HYG DFGAGGS+
Sbjct: 203 DADFPYYSSTLLNQQPHYPFSSSPSHPRQQDHDHYGKDFGAGGST 247

[Close]
BLAST of Sed0001349 vs. NCBI nr
Match: KAG7014616.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-51
Identity = 119/169 (70.41%), Postives = 124/169 (73.37%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 7   KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 66

Query: 87  ERVQFSP--------TAAAAAAPPAVAPL--------------QLSPEEGFPGLEQYAQL 146
           ERVQ +P        T  AAAAP  VA L              +L  EE FPGL QYAQL
Sbjct: 67  ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPRLPQEEAFPGLHQYAQL 126

Query: 147 LSGNDADFAYYCSTLLHQQPHYDFSSSSSQQH-QDHSHYGNDFGAGGSS 173
           LS  DADF YY STLL+QQPHY FSSS S  H QDH HYG DFG GGS+
Sbjct: 127 LSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGST 175

[Close]
BLAST of Sed0001349 vs. NCBI nr
Match: KAG6576097.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-51
Identity = 119/169 (70.41%), Postives = 123/169 (72.78%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 14  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 73

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQ--------------LSPEEGFPGLEQYAQL 146
           ERVQ +P        T  AAAAP  VA L               L  EE FPGL QYAQL
Sbjct: 74  ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSVALVPPLPQEEAFPGLHQYAQL 133

Query: 147 LSGNDADFAYYCSTLLHQQPHYDFSSSSSQQH-QDHSHYGNDFGAGGSS 173
           LS  DADF YY STLL+QQPHY FSSS S  H QDH HYG DFG GGS+
Sbjct: 134 LSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGPGGST 182

[Close]
BLAST of Sed0001349 vs. NCBI nr
Match: XP_022953884.1 (ethylene-responsive transcription factor ERF113-like [Cucurbita moschata])

HSP 1 Score: 211.5 bits (537), Expect = 5.9e-51
Identity = 119/170 (70.00%), Postives = 123/170 (72.35%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 63  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 122

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQLSPE---------------EGFPGLEQYAQ 146
           ERVQ +P        T  AAAAP  VA L  S                 E FPGL QYAQ
Sbjct: 123 ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSSVALLPPLPQGEAFPGLHQYAQ 182

Query: 147 LLSGNDADFAYYCSTLLHQQPHYDFSSSSSQQH-QDHSHYGNDFGAGGSS 173
           LLS  DADF YY STLL+QQPHY FSSS S  H QDH HYG DFGAGGS+
Sbjct: 183 LLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGAGGST 232

[Close]
BLAST of Sed0001349 vs. NCBI nr
Match: XP_023548873.1 (ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-50
Identity = 119/168 (70.83%), Postives = 123/168 (73.21%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 14  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 73

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQ-------------LSPEEGFPGLEQYAQLL 146
           ERVQ +P        T  AAAAP  VA L              L  EE FPGL QYAQLL
Sbjct: 74  ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSISLLPPLPQEEAFPGLHQYAQLL 133

Query: 147 SGNDADFAYYCSTLLHQQPHYDFSSSSSQQ-HQDHSHYGNDFGAGGSS 173
           S  DADF YY STLL+QQPHY FSSS S    QDH HYG DFGAGGS+
Sbjct: 134 SSTDADFPYYSSTLLNQQPHYPFSSSPSHPLPQDHDHYGKDFGAGGST 181

[Close]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.9e-33
Identity = 87/144 (60.42%), Postives = 95/144 (65.97%), Query Frame = 0 

Query: 29  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPER 88
           HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE AA+AYD AAL+FKGTKAKLNFPER
Sbjct: 38  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPER 97

Query: 89  VQF-SPTAAAAAAPPAVAPLQLS--PEEGFPG-------------LEQYAQLL-SGNDAD 148
           VQ  + T   + AP  V+    S  P  G P              + QYAQLL S N+ D
Sbjct: 98  VQGPTTTTTISHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLTSNNEVD 157

Query: 149 FAYYCSTLLHQQPHYDFSSSSSQQ 156
            +YY STL  Q      SSSSS Q
Sbjct: 158 LSYYTSTLFSQPFSTPSSSSSSSQ 181

[Close]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 25  LGKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLN 84
           L K HYRGVRQRPWGKWAAEIRDP+KAARVWLGTFETAEAAA+AYDNAAL+FKG+KAKLN
Sbjct: 87  LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLN 146

Query: 85  FPERVQFSPTAAAAAAPP 103
           FPER Q +   +    PP
Sbjct: 147 FPERAQLASNTSTTTGPP 164

[Close]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 25  LGKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLN 84
           L + HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE+AA+AYD AAL+FKG+KAKLN
Sbjct: 85  LRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLN 144

Query: 85  FPERVQFSPTAAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGND 130
           FPERVQ    +   ++       Q+ P +  P   QY    S  D
Sbjct: 145 FPERVQLGSNSTYYSSNQIP---QMEP-QSIPNYNQYYHDASSGD 185

[Close]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match: P93007 (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 69/143 (48.25%), Postives = 81/143 (56.64%), Query Frame = 0 

Query: 29  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPER 88
           +YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE AA+AYD AA  F+G KAKLNFPE 
Sbjct: 69  NYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEH 128

Query: 89  VQFSPT--------------AAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGNDADFAY 148
           ++ +PT                  + PP +AP  L        L+QY    S +    A 
Sbjct: 129 IRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDIL--------LDQYGHFQSRSSDSSAN 188

Query: 149 YCSTLLHQQPHYDFSSSSSQQHQ 158
               +L        SSSSS  HQ
Sbjct: 189 LSMNMLS-------SSSSSLNHQ 196

[Close]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.8e-24
Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K  YRGVRQRPWGKWAAEIRDP +AARVWLGTF+TAEAAA AYD AALRF+G KAKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 87  ERVQFSPTAAAAAAPPA 104
           E V+  P        PA
Sbjct: 134 EDVRILPPPPPLLRSPA 150

[Close]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match: A0A6J1JTV1 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661 GN=LOC111488287 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.4e-52
Identity = 119/165 (72.12%), Postives = 125/165 (75.76%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 83  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 142

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQ----------LSPEEGFPGLEQYAQLLSGN 146
           ERVQ +P        T  AAAAP  VA L           L  EE FPGL+QYAQLLS  
Sbjct: 143 ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSVALLPPLPQEEAFPGLQQYAQLLSST 202

Query: 147 DADFAYYCSTLLHQQPHYDFSSSSSQ-QHQDHSHYGNDFGAGGSS 173
           DADF YY STLL+QQPHY FSSS S  + QDH HYG DFGAGGS+
Sbjct: 203 DADFPYYSSTLLNQQPHYPFSSSPSHPRQQDHDHYGKDFGAGGST 247

[Close]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match: A0A6J1GR63 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=3662 GN=LOC111456288 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-51
Identity = 119/170 (70.00%), Postives = 123/170 (72.35%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 63  KIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 122

Query: 87  ERVQFSP--------TAAAAAAPPAVAPLQLSPE---------------EGFPGLEQYAQ 146
           ERVQ +P        T  AAAAP  VA L  S                 E FPGL QYAQ
Sbjct: 123 ERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSSSVALLPPLPQGEAFPGLHQYAQ 182

Query: 147 LLSGNDADFAYYCSTLLHQQPHYDFSSSSSQQH-QDHSHYGNDFGAGGSS 173
           LLS  DADF YY STLL+QQPHY FSSS S  H QDH HYG DFGAGGS+
Sbjct: 183 LLSSTDADFPYYSSTLLNQQPHYPFSSSPSHPHQQDHDHYGKDFGAGGST 232

[Close]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match: A0A0A0K9G5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.3e-47
Identity = 114/167 (68.26%), Postives = 121/167 (72.46%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 24  KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 83

Query: 87  ERVQFSPT-------AAAAAAPPAVA--------PLQLSPEEGFPGLEQYAQLLSGNDAD 146
           ERVQ +P        A+ AA PP  A        P  LS EE FPGL QYAQLLS +DAD
Sbjct: 84  ERVQANPAEFGFLSPASIAAPPPPTAVSSPSVSLPPPLSHEEAFPGLHQYAQLLSSSDAD 143

Query: 147 FAYYCSTLL--HQQPHYDF----SSSSSQQHQDHSHYGNDFGAGGSS 173
           F YY S+LL   QQ HY F    SSSS QQ +D   YG DFG GGS+
Sbjct: 144 FPYYSSSLLFNQQQSHYPFFSSSSSSSQQQQEDQDRYGEDFGTGGSN 190

[Close]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match: A0A5D3DLW8 (Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001920 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.3e-47
Identity = 111/167 (66.47%), Postives = 120/167 (71.86%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 10  KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 69

Query: 87  ERVQFSPTAAAAAAPPAVA---------------PLQLSPEEGFPGLEQYAQLLSGNDAD 146
           ERVQ +P      +PP++A               P  LS EE FPGL QYAQLLS +DAD
Sbjct: 70  ERVQANPAEFGFLSPPSIAAPPPPTAVSSPSVSLPPPLSHEEVFPGLHQYAQLLSSSDAD 129

Query: 147 FAYYCSTLL--HQQPHYDF----SSSSSQQHQDHSHYGNDFGAGGSS 173
           F YY S+LL   QQ HY F    SSSS QQ +D   YG DFG GGS+
Sbjct: 130 FPYYSSSLLFNQQQSHYPFFSSSSSSSQQQQEDQDRYGEDFGTGGSN 176

[Close]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match: E5GB56 (AP2 domain transcription factor RAP2 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.3e-47
Identity = 111/167 (66.47%), Postives = 120/167 (71.86%), Query Frame = 0 

Query: 27  KPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFP 86
           K HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAEAAAIAYDNAALRFKGTKAKLNFP
Sbjct: 85  KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFP 144

Query: 87  ERVQFSPTAAAAAAPPAVA---------------PLQLSPEEGFPGLEQYAQLLSGNDAD 146
           ERVQ +P      +PP++A               P  LS EE FPGL QYAQLLS +DAD
Sbjct: 145 ERVQANPAEFGFLSPPSIAAPPPPTAVSSPSVSLPPPLSHEEVFPGLHQYAQLLSSSDAD 204

Query: 147 FAYYCSTLL--HQQPHYDF----SSSSSQQHQDHSHYGNDFGAGGSS 173
           F YY S+LL   QQ HY F    SSSS QQ +D   YG DFG GGS+
Sbjct: 205 FPYYSSSLLFNQQQSHYPFFSSSSSSSQQQQEDQDRYGEDFGTGGSN 251

[Close]
BLAST of Sed0001349 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 141.4 bits (355), Expect = 7.0e-34
Identity = 87/144 (60.42%), Postives = 95/144 (65.97%), Query Frame = 0 

Query: 29  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPER 88
           HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE AA+AYD AAL+FKGTKAKLNFPER
Sbjct: 38  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPER 97

Query: 89  VQF-SPTAAAAAAPPAVAPLQLS--PEEGFPG-------------LEQYAQLL-SGNDAD 148
           VQ  + T   + AP  V+    S  P  G P              + QYAQLL S N+ D
Sbjct: 98  VQGPTTTTTISHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLTSNNEVD 157

Query: 149 FAYYCSTLLHQQPHYDFSSSSSQQ 156
            +YY STL  Q      SSSSS Q
Sbjct: 158 LSYYTSTLFSQPFSTPSSSSSSSQ 181

[Close]
BLAST of Sed0001349 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 25  LGKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLN 84
           L K HYRGVRQRPWGKWAAEIRDP+KAARVWLGTFETAEAAA+AYDNAAL+FKG+KAKLN
Sbjct: 87  LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLN 146

Query: 85  FPERVQFSPTAAAAAAPP 103
           FPER Q +   +    PP
Sbjct: 147 FPERAQLASNTSTTTGPP 164

[Close]
BLAST of Sed0001349 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 25  LGKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLN 84
           L + HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE+AA+AYD AAL+FKG+KAKLN
Sbjct: 85  LRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLN 144

Query: 85  FPERVQFSPTAAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGND 130
           FPERVQ    +   ++       Q+ P +  P   QY    S  D
Sbjct: 145 FPERVQLGSNSTYYSSNQIP---QMEP-QSIPNYNQYYHDASSGD 185

[Close]
BLAST of Sed0001349 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 69/143 (48.25%), Postives = 81/143 (56.64%), Query Frame = 0 

Query: 29  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPER 88
           +YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE AA+AYD AA  F+G KAKLNFPE 
Sbjct: 69  NYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEH 128

Query: 89  VQFSPT--------------AAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGNDADFAY 148
           ++ +PT                  + PP +AP  L        L+QY    S +    A 
Sbjct: 129 IRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDIL--------LDQYGHFQSRSSDSSAN 188

Query: 149 YCSTLLHQQPHYDFSSSSSQQHQ 158
               +L        SSSSS  HQ
Sbjct: 189 LSMNMLS-------SSSSSLNHQ 196

[Close]
BLAST of Sed0001349 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 69/143 (48.25%), Postives = 81/143 (56.64%), Query Frame = 0 

Query: 29  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAIAYDNAALRFKGTKAKLNFPER 88
           +YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE AA+AYD AA  F+G KAKLNFPE 
Sbjct: 69  NYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEH 128

Query: 89  VQFSPT--------------AAAAAAPPAVAPLQLSPEEGFPGLEQYAQLLSGNDADFAY 148
           ++ +PT                  + PP +AP  L        L+QY    S +    A 
Sbjct: 129 IRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDIL--------LDQYGHFQSRSSDSSAN 188

Query: 149 YCSTLLHQQPHYDFSSSSSQQHQ 158
               +L        SSSSS  HQ
Sbjct: 189 LSMNMLS-------SSSSSLNHQ 196

The following BLAST results are available for this feature:
BLAST of Sed0001349 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022991755.19.2e-5272.12ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima][more]
KAG7014616.12.7e-5170.41Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
KAG6576097.13.5e-5170.41Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022953884.15.9e-5170.00ethylene-responsive transcription factor ERF113-like [Cucurbita moschata][more]
XP_023548873.11.0e-5070.83ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Sed0001349 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LYU39.9e-3360.42Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LY291.7e-2978.21Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9FH541.6e-2761.90Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ... [more]
P930072.9e-2448.25Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ... [more]
Q70II33.8e-2472.73Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Sed0001349 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JTV14.4e-5272.12ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1GR632.9e-5170.00ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=36... [more]
A0A0A0K9G53.3e-4768.26AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=... [more]
A0A5D3DLW87.3e-4766.47Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var... [more]
E5GB567.3e-4766.47AP2 domain transcription factor RAP2 OS=Cucumis melo subsp. melo OX=412675 PE=4 ... [more]
BLAST of Sed0001349 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G13330.17.0e-3460.42related to AP2 6l [more]
AT5G07310.11.2e-3078.21Integrase-type DNA-binding superfamily protein [more]
AT5G61890.11.2e-2861.90Integrase-type DNA-binding superfamily protein [more]
AT2G33710.12.1e-2548.25Integrase-type DNA-binding superfamily protein [more]
AT2G33710.22.1e-2548.25Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..41
score: 76.67
coord: 52..68
score: 69.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 29..92
e-value: 3.1E-37
score: 139.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 28..78
e-value: 3.4E-14
score: 52.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 29..86
score: 24.81621
IPR001471AP2/ERF domainCDDcd00018AP2coord: 28..87
e-value: 3.64305E-24
score: 87.7123
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 29..88
e-value: 1.1E-27
score: 97.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..173
NoneNo IPR availablePANTHERPTHR31190:SF262ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110coord: 18..159
IPR044808Ethylene-responsive transcription factorPANTHERPTHR31190DNA-BINDING DOMAINcoord: 18..159
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 29..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001349.1Sed0001349.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0097196 Shu complex
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003677 DNA binding