Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCTGAGAAAGATCGGCGTTAATTCAACTCAATTCTCTCGATTCTCAGCAATTAATGGATCCTAAAATCACCCAGATTTCAGGTATTGATCCGTTTTTGTTTTTTCATCTCGTTCATTTCTGCTAAATTTCATCACTGATTTCTCATAAATTTTCTTCAAGTTTTTTCATCTCATTCATTTCTGCTAAATTTCATCACCCATTTCTCATAAATTTTCTTCAAATCCGCAGTGAAAAAACCCGTTCCCTCTAAACCGAAATTCACCCGAAAGCCGTACTCCGAAGCTCCCCAAGTGGCCGCTCTTCAACCTCCAATTTCCAGGTATTGTTCTCAATTTCATTCTAAATTTCTTCGTCGAATTGTGTTCTTCTGTAGTAGAGTAAAGTTTGAATCTTGATGATACCATTAGGCAGAAGCGAGTTTTCGGAACTGTTCGTAGCACAAACATTCCAATCAAACCGCTAAATGAAAAGCCCTTAGCTAAGCCATTGATTGAGGCTGTTAAGAAACAGCCCAAATCAACCCGATTAGCTCAAGTTGCGGTTAATGCTGCTGCTGATCATAAGATTACTGAAAAATTGAATCCGAGGCTGAAGAAGAAGAGTCCTAGCAGTAGCACGAAACAGCTTGTTAGGGAAACGGCTATTAGGGATTTGCGCGTTCGGTCCGACGTCGTAGAGCCACAGACACCCGTAGCGAGGCCTCGTTTGTTGAAGTTGAAAAACGGTGGAACCCCGTATCATACTGCCGAAAAATGCAGTAAATGCCGTTTTGACAAAATGGAGACTTCTTCGTATTGGGTTTCTCAGATCAAATTGGCTGAATCCGTTGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGGTAGTCTAAATTTTATATGTGAACATTTTATCTTTGTCATTCATCATATCTAGACTAGAAGTGTTTTTAGAATTAGTAATGCTGGACAAAGTACTGTGATTCTTTAACCATTTTAGTAAAAATTGGTTAATGGCATGTCCTTGAAAACATTGTAGTTCTTAGATAGAACTAAGATGGTTAACAAAAGGTAGTTTGGACATAATTAGAACAGAGATTGTTGACAAAAGGAGAAACAAGAAGGTTAATTTCCAAAGTGAGCCTCCCCTCAACGTCCATGGTTCAAGACTCGTCTATGACATTAATTTATAGGCAAGACGGTGTCTCCATTCCTTCAATGTCTCTCGTGCCTGGCCTAGGGGTAGCATGGTTACCTTGGGAATAGCGGAGTGAACAAATGATTTCTGTTTCCAAAAATAGAAAAATGACAAACTGAGCCTAATGTTAATTGGCATATGTTTGATTAAAAAGTTAAAAGTTTGACACCTCAAAATGGTTGAACTAAGAAGAATTCTAGCAGCTAATTCCTTCCCAAACTATAGGAAAGAGAGATTCTTTCTATGTGAAACATTGAAGTGCCAATATGAATTTGGATTTTCCAGCAAAAAGATCTCATTTAATGACTGGGGAAGTCTTTTTTTCTTTTAGTGATGTTATGAATTTAAAGAGGATCTTGTCTAGTGTAACATCTAACTAGATAACTGACTAATACTTGGCAACAAGAACAAAGTCTTTCTAAAATTCTCTGCGATCTCTTTGGTCTGATCACAATTCTGTTTCTAGCTTCCATTTATATTGATATCTGGCTTTACTACAACAGCCGAACAGGAACCTCAAAGTGGAGCTAAAGCGATACTTGACTCGCCACGAACATCTCTCTACGAACACTGAATGGAAAGATGTGAGTCTTAGCTACGGCCTACTTGAAGATGACAACAATGGCAGCCCCCACAATCCGTACACTGAAATCTGTGACACTGAACTCAACAGCAAAGATAATGAGAATGCAGCTATCGAATCTCGGACGCCAGAAATCATCAGCAGTGAACTCAATAAAGATGAGATTGTGGGAACTGATGTTGGTGGGCTAGGAACCGAGACAAGCCAAAGATGGCCAAGTTCTTTGTCTATGGAACTGGGACAGACCATCAATGTTGACAGCCGAGTTTGATCTTTTGTAGCCTTAGTTCATTTGTGCTCGTGTGTATAATTGTATTGTCGTTTGTTCTTGGCATTGCCTTTTTCACACTCTATTTCCTTGGCTAGTCAAATGATTTGAAGATTGTTTGATGTTATTCAAACTATATATAAAATATATTATACGGATTTGTGTTTGA
mRNA sequence
CATCTGAGAAAGATCGGCGTTAATTCAACTCAATTCTCTCGATTCTCAGCAATTAATGGATCCTAAAATCACCCAGATTTCAGTGAAAAAACCCGTTCCCTCTAAACCGAAATTCACCCGAAAGCCGTACTCCGAAGCTCCCCAAGTGGCCGCTCTTCAACCTCCAATTTCCAGGCAGAAGCGAGTTTTCGGAACTGTTCGTAGCACAAACATTCCAATCAAACCGCTAAATGAAAAGCCCTTAGCTAAGCCATTGATTGAGGCTGTTAAGAAACAGCCCAAATCAACCCGATTAGCTCAAGTTGCGGTTAATGCTGCTGCTGATCATAAGATTACTGAAAAATTGAATCCGAGGCTGAAGAAGAAGAGTCCTAGCAGTAGCACGAAACAGCTTGTTAGGGAAACGGCTATTAGGGATTTGCGCGTTCGGTCCGACGTCGTAGAGCCACAGACACCCGTAGCGAGGCCTCGTTTGTTGAAGTTGAAAAACGGTGGAACCCCGTATCATACTGCCGAAAAATGCAGTAAATGCCGTTTTGACAAAATGGAGACTTCTTCGTATTGGGTTTCTCAGATCAAATTGGCTGAATCCGTTGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGCCGAACAGGAACCTCAAAGTGGAGCTAAAGCGATACTTGACTCGCCACGAACATCTCTCTACGAACACTGAATGGAAAGATGTGAGTCTTAGCTACGGCCTACTTGAAGATGACAACAATGGCAGCCCCCACAATCCGTACACTGAAATCTGTGACACTGAACTCAACAGCAAAGATAATGAGAATGCAGCTATCGAATCTCGGACGCCAGAAATCATCAGCAGTGAACTCAATAAAGATGAGATTGTGGGAACTGATGTTGGTGGGCTAGGAACCGAGACAAGCCAAAGATGGCCAAGTTCTTTGTCTATGGAACTGGGACAGACCATCAATGTTGACAGCCGAGTTTGATCTTTTGTAGCCTTAGTTCATTTGTGCTCGTGTGTATAATTGTATTGTCGTTTGTTCTTGGCATTGCCTTTTTCACACTCTATTTCCTTGGCTAGTCAAATGATTTGAAGATTGTTTGATGTTATTCAAACTATATATAAAATATATTATACGGATTTGTGTTTGA
Coding sequence (CDS)
ATGGATCCTAAAATCACCCAGATTTCAGTGAAAAAACCCGTTCCCTCTAAACCGAAATTCACCCGAAAGCCGTACTCCGAAGCTCCCCAAGTGGCCGCTCTTCAACCTCCAATTTCCAGGCAGAAGCGAGTTTTCGGAACTGTTCGTAGCACAAACATTCCAATCAAACCGCTAAATGAAAAGCCCTTAGCTAAGCCATTGATTGAGGCTGTTAAGAAACAGCCCAAATCAACCCGATTAGCTCAAGTTGCGGTTAATGCTGCTGCTGATCATAAGATTACTGAAAAATTGAATCCGAGGCTGAAGAAGAAGAGTCCTAGCAGTAGCACGAAACAGCTTGTTAGGGAAACGGCTATTAGGGATTTGCGCGTTCGGTCCGACGTCGTAGAGCCACAGACACCCGTAGCGAGGCCTCGTTTGTTGAAGTTGAAAAACGGTGGAACCCCGTATCATACTGCCGAAAAATGCAGTAAATGCCGTTTTGACAAAATGGAGACTTCTTCGTATTGGGTTTCTCAGATCAAATTGGCTGAATCCGTTGGGAAGCATTTTGTGTCAGCTGATTTCTTTCGCCTTGCTTATGTCTGCAATGCCGAGCCGAACAGGAACCTCAAAGTGGAGCTAAAGCGATACTTGACTCGCCACGAACATCTCTCTACGAACACTGAATGGAAAGATGTGAGTCTTAGCTACGGCCTACTTGAAGATGACAACAATGGCAGCCCCCACAATCCGTACACTGAAATCTGTGACACTGAACTCAACAGCAAAGATAATGAGAATGCAGCTATCGAATCTCGGACGCCAGAAATCATCAGCAGTGAACTCAATAAAGATGAGATTGTGGGAACTGATGTTGGTGGGCTAGGAACCGAGACAAGCCAAAGATGGCCAAGTTCTTTGTCTATGGAACTGGGACAGACCATCAATGTTGACAGCCGAGTTTGA
Protein sequence
MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNEKPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIRDLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESVGKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNGSPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSSLSMELGQTINVDSRV
Homology
BLAST of Sed0001336 vs. NCBI nr
Match:
XP_022944218.1 (uncharacterized protein LOC111448733 [Cucurbita moschata])
HSP 1 Score: 461.1 bits (1185), Expect = 7.8e-126
Identity = 239/312 (76.60%), Postives = 266/312 (85.26%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RKP EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
KPLAKPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ET ++
Sbjct: 61 KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETGLK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV++DVVEP TPV RPR LK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNDVVEPHTPVMRPRFLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWKDVSLSYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQRWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. NCBI nr
Match:
KAG6570771.1 (hypothetical protein SDJN03_29686, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 458.0 bits (1177), Expect = 6.6e-125
Identity = 239/312 (76.60%), Postives = 267/312 (85.58%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RK EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKSSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
KPLAKPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ETA++
Sbjct: 61 KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETALK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV+++VVEPQTPV RPRLLK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNEVVEPQTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWK VSLSYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKYVSLSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQRWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. NCBI nr
Match:
XP_022985821.1 (uncharacterized protein LOC111483750 [Cucurbita maxima])
HSP 1 Score: 457.6 bits (1176), Expect = 8.7e-125
Identity = 236/312 (75.64%), Postives = 265/312 (84.94%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RKP EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
PL KPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ETA++
Sbjct: 61 NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETALK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV++DVVEP TPV RPRLLK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAY+CNAEP RNL+VELKRYLTRHEHLS NTEWKDVS SYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQRWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. NCBI nr
Match:
XP_023513032.1 (uncharacterized protein LOC111777597 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 456.1 bits (1172), Expect = 2.5e-124
Identity = 239/312 (76.60%), Postives = 266/312 (85.26%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RKP EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
KPLAKPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKK S S KQ V ETA++
Sbjct: 61 KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKK--SHSIKQQVTETALK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV++DVVEPQTPV RPRLLK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNDVVEPQTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWKDV LSYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVRLSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQR P+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRCPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. NCBI nr
Match:
KAG7010618.1 (hypothetical protein SDJN02_27412 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 456.1 bits (1172), Expect = 2.5e-124
Identity = 238/312 (76.28%), Postives = 266/312 (85.26%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RK EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKSSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
KPLAKPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ETA++
Sbjct: 61 KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETALK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV+++VVEPQTPV RPRLLK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNEVVEPQTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWK VSLSYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKYVSLSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETS RWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSHRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. ExPASy TrEMBL
Match:
A0A6J1FXU3 (uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC111448733 PE=4 SV=1)
HSP 1 Score: 461.1 bits (1185), Expect = 3.8e-126
Identity = 239/312 (76.60%), Postives = 266/312 (85.26%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RKP EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
KPLAKPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ET ++
Sbjct: 61 KPLAKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETGLK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV++DVVEP TPV RPR LK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNDVVEPHTPVMRPRFLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWKDVSLSYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQRWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. ExPASy TrEMBL
Match:
A0A6J1J9A3 (uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750 PE=4 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 4.2e-125
Identity = 236/312 (75.64%), Postives = 265/312 (84.94%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+TQI K + SKPKF RKP EAP++ A QPPISRQKRVFGTVRS+NIPIKP+NE
Sbjct: 1 MDPKLTQIPAKS-LSSKPKFIRKPSYEAPKITAYQPPISRQKRVFGTVRSSNIPIKPVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
PL KPLI A+KKQPKSTRL Q+AVN AD KI EKLNPR KKKSP S KQ V ETA++
Sbjct: 61 NPLGKPLIGAIKKQPKSTRLPQIAVNVTADQKINEKLNPRPKKKSP--SIKQQVTETALK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV++DVVEP TPV RPRLLK KN GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 DLRVQNDVVEPHTPVIRPRLLKSKNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESA 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAY+CNAEP RNL+VELKRYLTRHEHLS NTEWKDVS SYGL++DD+NG
Sbjct: 181 GKHFVSADFFRLAYICNAEPIRNLRVELKRYLTRHEHLSMNTEWKDVSFSYGLIQDDDNG 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
P NP TEIC +E+N KD++ AA+ES TPEI SS+L+KDEIVG DVG LGTETSQRWP+S
Sbjct: 241 GPKNPSTEICGSEIN-KDHQIAAMESGTPEISSSKLDKDEIVGADVGELGTETSQRWPNS 300
Query: 301 LSMELGQTINVD 313
LS+E ++I D
Sbjct: 301 LSVEPDRSIKAD 308
BLAST of Sed0001336 vs. ExPASy TrEMBL
Match:
A0A6J1H140 (uncharacterized protein LOC111459426 OS=Cucurbita moschata OX=3662 GN=LOC111459426 PE=4 SV=1)
HSP 1 Score: 454.1 bits (1167), Expect = 4.6e-124
Identity = 240/308 (77.92%), Postives = 262/308 (85.06%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+++I V KPV SKPKF RKP E PQ+ LQPPISRQKRVFG VRS+NIPIK +NE
Sbjct: 1 MDPKLSRIPV-KPVSSKPKFIRKPACEGPQITPLQPPISRQKRVFGIVRSSNIPIKSVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAIR 120
PLAKPLI AVKKQPKSTRL Q+AVNA D KI+EKLNPR KKK S STKQ V ETAI+
Sbjct: 61 NPLAKPLIGAVKKQPKSTRLTQIAVNATTDQKISEKLNPRPKKK--SLSTKQQVMETAIK 120
Query: 121 DLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAESV 180
DLRV +DVVEPQTPVARPRL K++N GTPYHTAEKCS CRFDKMETSSYWV+QIKLAESV
Sbjct: 121 DLRVTNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAESV 180
Query: 181 GKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNNG 240
GKHFVSADFFRLAYVCNAEP +NLKVELKRYLTRHEHLS NTEWKDVSLSYGLL+D+N
Sbjct: 181 GKHFVSADFFRLAYVCNAEPIKNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENIS 240
Query: 241 SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPSS 300
PH+P T+ICD+ELN + N+ AIESRTPE SSE +KDEIVGTDVG LGTET QR PSS
Sbjct: 241 GPHDPSTKICDSELN-EGNQTTAIESRTPEFSSSEFDKDEIVGTDVGELGTETCQRCPSS 300
Query: 301 LSMELGQT 309
L ME QT
Sbjct: 301 LPMEPEQT 304
BLAST of Sed0001336 vs. ExPASy TrEMBL
Match:
A0A6J1K637 (uncharacterized protein LOC111491034 OS=Cucurbita maxima OX=3661 GN=LOC111491034 PE=4 SV=1)
HSP 1 Score: 449.5 bits (1155), Expect = 1.1e-122
Identity = 240/309 (77.67%), Postives = 262/309 (84.79%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKPLNE 60
MDPK+++I V KPV SKPKF RKP EAPQ+ ALQPPISRQKRVFG VRS+NIPIK +NE
Sbjct: 1 MDPKLSRIPV-KPVSSKPKFIRKPACEAPQITALQPPISRQKRVFGIVRSSNIPIKSVNE 60
Query: 61 KPLAKPLIEAVKKQPKSTRLAQVAVNAAADH-KITEKLNPRLKKKSPSSSTKQLVRETAI 120
PLAKPLI AVKKQPKSTRL Q+AVNA D KITEKLNP+ KKKSP STKQ AI
Sbjct: 61 NPLAKPLIGAVKKQPKSTRLTQIAVNATTDQKKITEKLNPKPKKKSP--STKQQFMGMAI 120
Query: 121 RDLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAES 180
+DLRV +DVVEPQTPVARPRL K++N GTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 KDLRVMNDVVEPQTPVARPRLHKMRNAGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES 180
Query: 181 VGKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNN 240
VGKHFVSADFFRLAYVC+AEP RNLKVELKRYLTRHEHLS NTEWKDVSLSYGLL+D+N
Sbjct: 181 VGKHFVSADFFRLAYVCSAEPFRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQDENI 240
Query: 241 GSPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWPS 300
PHNP T+ICD+EL+ +DN+ AIESRTPE SE +KDEIVGTDVG LGTET QR PS
Sbjct: 241 SGPHNPSTKICDSELD-QDNQATAIESRTPEFSGSEFDKDEIVGTDVGELGTETCQRCPS 300
Query: 301 SLSMELGQT 309
SL ME QT
Sbjct: 301 SLPMEPKQT 305
BLAST of Sed0001336 vs. ExPASy TrEMBL
Match:
A0A5A7SVQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00290 PE=4 SV=1)
HSP 1 Score: 422.9 bits (1086), Expect = 1.1e-114
Identity = 229/306 (74.84%), Postives = 254/306 (83.01%), Query Frame = 0
Query: 1 MDPKITQISVKKPVPSKPKFTRKPYSEAPQVAALQPPISRQKRVFGTVRSTNIPIKP-LN 60
MDPK+TQI KP+ SKPKFTRKP SEAPQ+ A QP ISRQKRVFGTVRS+NIPIKP +N
Sbjct: 1 MDPKLTQIPA-KPISSKPKFTRKP-SEAPQITAHQPQISRQKRVFGTVRSSNIPIKPVVN 60
Query: 61 EKPLAKPLIEAVKKQPKSTRLAQVAVNAAADHKITEKLNPRLKKKSPSSSTKQLVRETAI 120
EKPL KP+I VKKQPK RL Q++VNA D KI EKLNPRLKKKSP +Q V ETA+
Sbjct: 61 EKPLTKPVIGGVKKQPK-PRLPQISVNATVDRKINEKLNPRLKKKSP--GIQQQVTETAV 120
Query: 121 RDLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDKMETSSYWVSQIKLAES 180
+DLR DVVEPQTPVARPR LKLKNGGTPYHTAEKCS CRFDKMETSSYWV+QIKLAES
Sbjct: 121 KDLRDGDDVVEPQTPVARPRFLKLKNGGTPYHTAEKCSNCRFDKMETSSYWVAQIKLAES 180
Query: 181 VGKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTEWKDVSLSYGLLEDDNN 240
VGKHFVSADFFRLAYVCNAEP RNLKVELKRYLTRHEHLS NTEWKDVSLSYGLL++D N
Sbjct: 181 VGKHFVSADFFRLAYVCNAEPIRNLKVELKRYLTRHEHLSMNTEWKDVSLSYGLLQNDTN 240
Query: 241 G-SPHNPYTEICDTELNSKDNENAAIESRTPEIISSELNKDEIVGTDVGGLGTETSQRWP 300
G SPHNP TEI E+N +++ TPEI SS+L KDEIVGTDV +GTET+Q+W
Sbjct: 241 GASPHNPATEISGNEINK-------LQTVTPEISSSKLVKDEIVGTDVSEIGTETTQKWV 294
Query: 301 SSLSME 305
+S+S+E
Sbjct: 301 NSMSIE 294
BLAST of Sed0001336 vs. TAIR 10
Match:
AT5G62550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). )
HSP 1 Score: 63.2 bits (152), Expect = 4.4e-10
Identity = 53/180 (29.44%), Postives = 80/180 (44.44%), Query Frame = 0
Query: 104 KSPSSSTKQLVRETAIRDLRVRSDVVEPQTPVARPRLLKLKNGGTPYHTAEKCSKCRFDK 163
KS SSS L R V E TPV+ + ++ + +
Sbjct: 95 KSVSSSVTSLSEVKPKRSRIVPRSFNETTTPVSS-------------NLRSSVTRKKVED 154
Query: 164 METSSYWVSQIKLAESVGKHFVSADFFRLAYVCNAEPNRNLKVELKRYLTRHEHLSTNTE 223
+ +S+YW++ IKLAESV KH +S FF+LA EP +K ELK Y R+
Sbjct: 155 LSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCEPLDKMKEELKLYARRNNMDGLADA 214
Query: 224 WKDVSLSYGLLEDDNNGSPHNPYTEICDTELNSKDNENAAIES-RTP--EIISSELNKDE 281
K++S Y + E+ N + + + S +N+N S TP I+SE+ KD+
Sbjct: 215 MKELSELYNISEESNQVQVSETSSVVAEETAMSLNNDNDVQSSFSTPGNSNITSEITKDD 261
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022944218.1 | 7.8e-126 | 76.60 | uncharacterized protein LOC111448733 [Cucurbita moschata] | [more] |
KAG6570771.1 | 6.6e-125 | 76.60 | hypothetical protein SDJN03_29686, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022985821.1 | 8.7e-125 | 75.64 | uncharacterized protein LOC111483750 [Cucurbita maxima] | [more] |
XP_023513032.1 | 2.5e-124 | 76.60 | uncharacterized protein LOC111777597 [Cucurbita pepo subsp. pepo] | [more] |
KAG7010618.1 | 2.5e-124 | 76.28 | hypothetical protein SDJN02_27412 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FXU3 | 3.8e-126 | 76.60 | uncharacterized protein LOC111448733 OS=Cucurbita moschata OX=3662 GN=LOC1114487... | [more] |
A0A6J1J9A3 | 4.2e-125 | 75.64 | uncharacterized protein LOC111483750 OS=Cucurbita maxima OX=3661 GN=LOC111483750... | [more] |
A0A6J1H140 | 4.6e-124 | 77.92 | uncharacterized protein LOC111459426 OS=Cucurbita moschata OX=3662 GN=LOC1114594... | [more] |
A0A6J1K637 | 1.1e-122 | 77.67 | uncharacterized protein LOC111491034 OS=Cucurbita maxima OX=3661 GN=LOC111491034... | [more] |
A0A5A7SVQ9 | 1.1e-114 | 74.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT5G62550.1 | 4.4e-10 | 29.44 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |