Sed0001334 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGTAGCCTCAGCGATTGCTATAGCTACTGTTTCTGTCCAAATTCAAACCAAGTTGTCTTTCATGTTTCATTTTTTGTCACTTGCGTTAATGATCTGCTTTTCTTTCACAGTCACAGCCAAACTCATTCACCATCAAAGCCAAAGGGTTTCTCAAATTCTCTACTGTATTGGTGGGTTTTGGTTTGTGACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAATTATAACCTTCGCCATCTATCTCACGTTTTTGTTTGCTTCTTTTATCTCCCATTTCACTTAG ATGGCGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGTAGCCTCAGCGATTGCTATAGCTACTGTTTCTGTCCAAATTCAAACCAAGTTGTCTTTCATGTTTCATTTTTTGTCACTTGCGTTAATGATCTGCTTTTCTTTCACAGTCACAGCCAAACTCATTCACCATCAAAGCCAAAGGGTTTCTCAAATTCTCTACTGTATTGGTGGGTTTTGGTTTGTGACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAATTATAACCTTCGCCATCTATCTCACGTTTTTGTTTGCTTCTTTTATCTCCCATTTCACTTAG ATGGCGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGTAGCCTCAGCGATTGCTATAGCTACTGTTTCTGTCCAAATTCAAACCAAGTTGTCTTTCATGTTTCATTTTTTGTCACTTGCGTTAATGATCTGCTTTTCTTTCACAGTCACAGCCAAACTCATTCACCATCAAAGCCAAAGGGTTTCTCAAATTCTCTACTGTATTGGTGGGTTTTGGTTTGTGACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAATTATAACCTTCGCCATCTATCTCACGTTTTTGTTTGCTTCTTTTATCTCCCATTTCACTTAG MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFLFASFISHFT Homology
BLAST of Sed0001334 vs. NCBI nr
Match: KAG6584385.1 (hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.7 bits (348), Expect = 3.3e-29 Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Sed0001334 vs. NCBI nr
Match: KAG6572911.1 (hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.1 bits (261), Expect = 4.0e-19 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Sed0001334 vs. NCBI nr
Match: KAE8652531.1 (hypothetical protein Csa_013077, partial [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12 Identity = 42/90 (46.67%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of Sed0001334 vs. NCBI nr
Match: KAF3947054.1 (hypothetical protein CMV_026761 [Castanea mollissima]) HSP 1 Score: 75.1 bits (183), Expect = 4.4e-10 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of Sed0001334 vs. NCBI nr
Match: KAF3947053.1 (hypothetical protein CMV_026760 [Castanea mollissima]) HSP 1 Score: 69.3 bits (168), Expect = 2.4e-08 Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 0
BLAST of Sed0001334 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 5.3e-17 Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of Sed0001334 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of Sed0001334 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.7e-12 Identity = 43/94 (45.74%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of Sed0001334 vs. ExPASy TrEMBL
Match: A0A7N2M5A3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.6e-11 Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of Sed0001334 vs. ExPASy TrEMBL
Match: A0A7N2R866 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.1e-10 Identity = 41/105 (39.05%), Postives = 69/105 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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