Sed0001319 (gene) Chayote v1

Overview


Name	Sed0001319
Type	gene
Organism	Sechium edule (Chayote v1)
Description	plastid division protein PDV2
Location	LG10: 37240391 .. 37243617 (+)
RNA-Seq Expression	Sed0001319
Synteny	Sed0001319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCACAGAGTTTGTACCTAAGCTTGGCGCTTCTCTCAAACTCTTTTCTCCATTTTCAATACCCTAATCCCCTCAACAATTTCACACCAAAAAACCCTAATCCGCCATTTTTGTACCTCCAAAACCCCCCTCTTCAGTCATGGAAGAACAAAGCACGGCCATAATCCTAGCAAGAGCCATGGAGCTGCGGCTCAAGATTCGAAGCTCTGTTAACGCCACCACCGCCACCGCCATTCCGGATGATCGCTCCGCCCTGGATGGCGGTGCTTCACGGCGGAGTGAGGCGGCTGAGGGAGAGCTGGACGAGGAAGGGCTCCGGCTTTTGAATATTTGCGATGCGCTTGAGTCTCTTGAGAATCAGCTCTCTTCGCTGCAGGTTTGGTTTGCCGTTTTTGTTTTTTTTTTGTGCTGTTCATGTTGATCATTTCTGTGCTGTGTGTGATTGGTATTTTGACCTGGTTGATTCTGTTGATCGATGATTAGATTTATCTCTCGGTTCTTCCCGTAGCATTATCCATGGTAGTTTTGAGATGAATGCTAAGAGTAAGAGACCTATACGGAATTAATTAGAAAATAATCTAACCACCGCGGCTTAGTTTAGTGTTGTAGTCGTCACGATGGGTCTTAAGTAACTGTGAGTTGTGGGTTCAATCCGTGGTTGCACATACCTAGACATTAATGTTTTACGGTTTTTCTTGACAGTGTGGACAAGCTCACGAGAAAAAAAAAATCTAGTGGTTTTTTCTGAAGCATGTGAAGAAAAAGTTAACTTTGCGGTACGAGCTCCAAGATTGCGTAGTCATCTACTTAGAATATAAAACCAAATGTGTTTGGATCAAATAGTCGCCTTGCAAGAGTGCTCGAAGGTGCCTATAGCTAAGGCAATGTATGAAAGCTTCTTTTTTTTAAAACTGGAATTAGAGCTTTTCCCCCCACTTCACATTCAAGGGCACCTTTGCTCGCCCAAGGCCTAGACCCTGAAGATAAGAAGAGATTTTACCATTAAACTTATTCGTGAGTTTTGAATCTGAGACCTGATAGGGAGCATATTCGTGTGAGTATTAGTTATCACCCCAAGCCCCAATGGCCATCCTCTTTGATATGGAACAATTTCTTGATCTGAATCTGTTCCAAAACGTATATTAGAAGTCTGAAAGCTTTGATTTTGTATGCTGGTGCATCAATAGTCTACTGCTTCAGGTAATGCAACATATGGGTTTGTTAAAACCTTCAATGCCCGACTTCACTGGCTTGTGCATTGATATGGCTCGGATCTCTGTCTTTCAATGAGTTAGTATGAGTTATTTACCAATATATCTTACGTTCTGATGTCTCTATTCATTTGTCTCTGTGAACTTGTCCTCATTCATTATGACTATTGGTAGATTTCTTGTGGTATTAATCACCCAGCATGCTCCATGCCATCTTTTTGTCTCTTTGAATTGTGATAGGTGTATTAAATTCTCCGAAACCTGGTCCTTTACCGACAGTTGAATCTAGTGTTAAATGTTAAACTTCTAGGTGAGCTTGCCTGCATTAAGATATTGAAAAGATTATGTATATATATTAATAATCGGAAAAGGACCAGGGGAGTGGCCCAACCTGAACACAAAATGGAAAAAAAGTACAAGGGTAGTGAGGATAGGTTCTCGTCCACGGCTCCACTAAAGCATCACAAGGACCAACAAGAATAGCTCTCCAATTGGTTTCATAGGGGAAAAAAGATAAGAATAATTTAAAAGAATTAAACAGAGAGCTCTATTTACGAGCTAAAAATATATACTTTTCTTTTATATTAAAAAAAAGTATACTTGTTTTTGTTTATGTTAGAATCAGTTTACTGCTGATTGTCCTATCATGATTCAAGAAAAAGCTCTTTCACAGTATGGAATTACTTGTTGCCTTGTCATTGCGGCTAAAGATGTTTAGTGCATTCAAGTTTGGCAGGGTTTACTCAATTCAAATGCCTACAGCAGAAGCTGTTAATTTCTTTCTTCGTTTTGACCCTCCACGTTGTCTCTGCCCTCTGTTTGAAGTTTTAGTAGTCATTTTCAACATGAATCTGAAATTCAATATCAATAAAGTTTGTATAACCAACATAGTGGACCAAGAAAGTGAGAATAGTTAATAGTGTTGGTGCAGTGCAACAACGTTTGTAACACGGAGAGTATTATTCGATAGAGCATTGTAATGTAGTGGAAGCATGGATTCAACCTTCTAATATTTCTATCTTCTCCCTTCTACTTTGCAGGATTTACAGCAACGGCAAAGGTATGAGAAAGAAGCAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTTTACTGGATAAACTGAAGAAGTACAAAGGACAGGATTTGGAAGTGATACATGAGGCTGCAGCTTTTGCTGAGGAGACCGTGCAACACGACAAGGATTTCATGCTTCCATCATATCCAAACCATCCTGGTAATGGCTACTTACATCCTATCCCTTCTGGACACAAGTCTGTGACTAATGGCCATACGGATGCTTCGACAAATAAAGCCTCAAAGGAACTCACCGAATCAGATAGAAAACAATCAAAATCGGATTCAAGTAGCTCGAGGAATGGATTAGGAAATGTCATTAGCATAGCTGCAAAATCAGTGGTTACCGTTGTTGGCATAGTGTCCGTACTGCACTTGACTGGTCTCACTCCAAAGTTTTCTAGGAAAGTTGCTTCTTTGAGGTTTCTTGACCTTTTTCGCCAGTCTGCAGCTGGAAATAATGGATCACACAATGTATGTCCTCCAGGTAAGTTCCCCGTGATGGAAGGCGGTGAAACTCGATGCATAGTGAAAGAGAGAATCGAAGTTCCGTTTTCTTCAATTATTGCTAAACCAGATGTAAACTATGGAAGCGGGTAACGATTCAATCTCGCACGCTTGTGTGAGGCGTATTCTCCAAAAGGTCTTCAATTATGCACATTTTTCTCTTCAATAATTAGCTGCACTGCATAAATTTTTTTTCGTTGACCTTCTCACATTAGATGCAATAATAGATTTTCCAATTATCTACATTCATCCTCTACTAAAATTTTGGAAGAGTGTATGGACACAGTACAAAGATCATACAAAAAAGGATGTGCTAAACCTTTGGTCGGAACTGAAAGATTAGGGGAAGTAGGGAGAGCAACAACTCGTCGTTCTAATCATCGATGAAGACGATTGTGGACGAGACTACGACGTGTAGAACTAATAAACAGG

mRNA sequence

CCGCCACAGAGTTTGTACCTAAGCTTGGCGCTTCTCTCAAACTCTTTTCTCCATTTTCAATACCCTAATCCCCTCAACAATTTCACACCAAAAAACCCTAATCCGCCATTTTTGTACCTCCAAAACCCCCCTCTTCAGTCATGGAAGAACAAAGCACGGCCATAATCCTAGCAAGAGCCATGGAGCTGCGGCTCAAGATTCGAAGCTCTGTTAACGCCACCACCGCCACCGCCATTCCGGATGATCGCTCCGCCCTGGATGGCGGTGCTTCACGGCGGAGTGAGGCGGCTGAGGGAGAGCTGGACGAGGAAGGGCTCCGGCTTTTGAATATTTGCGATGCGCTTGAGTCTCTTGAGAATCAGCTCTCTTCGCTGCAGGATTTACAGCAACGGCAAAGGTATGAGAAAGAAGCAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTTTACTGGATAAACTGAAGAAGTACAAAGGACAGGATTTGGAAGTGATACATGAGGCTGCAGCTTTTGCTGAGGAGACCGTGCAACACGACAAGGATTTCATGCTTCCATCATATCCAAACCATCCTGGTAATGGCTACTTACATCCTATCCCTTCTGGACACAAGTCTGTGACTAATGGCCATACGGATGCTTCGACAAATAAAGCCTCAAAGGAACTCACCGAATCAGATAGAAAACAATCAAAATCGGATTCAAGTAGCTCGAGGAATGGATTAGGAAATGTCATTAGCATAGCTGCAAAATCAGTGGTTACCGTTGTTGGCATAGTGTCCGTACTGCACTTGACTGGTCTCACTCCAAAGTTTTCTAGGAAAGTTGCTTCTTTGAGGTTTCTTGACCTTTTTCGCCAGTCTGCAGCTGGAAATAATGGATCACACAATGTATGTCCTCCAGGTAAGTTCCCCGTGATGGAAGGCGGTGAAACTCGATGCATAGTGAAAGAGAGAATCGAAGTTCCGTTTTCTTCAATTATTGCTAAACCAGATGTAAACTATGGAAGCGGGTAACGATTCAATCTCGCACGCTTGTGTGAGGCGTATTCTCCAAAAGGTCTTCAATTATGCACATTTTTCTCTTCAATAATTAGCTGCACTGCATAAATTTTTTTTCGTTGACCTTCTCACATTAGATGCAATAATAGATTTTCCAATTATCTACATTCATCCTCTACTAAAATTTTGGAAGAGTGTATGGACACAGTACAAAGATCATACAAAAAAGGATGTGCTAAACCTTTGGTCGGAACTGAAAGATTAGGGGAAGTAGGGAGAGCAACAACTCGTCGTTCTAATCATCGATGAAGACGATTGTGGACGAGACTACGACGTGTAGAACTAATAAACAGG

Coding sequence (CDS)

ATGGAAGAACAAAGCACGGCCATAATCCTAGCAAGAGCCATGGAGCTGCGGCTCAAGATTCGAAGCTCTGTTAACGCCACCACCGCCACCGCCATTCCGGATGATCGCTCCGCCCTGGATGGCGGTGCTTCACGGCGGAGTGAGGCGGCTGAGGGAGAGCTGGACGAGGAAGGGCTCCGGCTTTTGAATATTTGCGATGCGCTTGAGTCTCTTGAGAATCAGCTCTCTTCGCTGCAGGATTTACAGCAACGGCAAAGGTATGAGAAAGAAGCAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTTTACTGGATAAACTGAAGAAGTACAAAGGACAGGATTTGGAAGTGATACATGAGGCTGCAGCTTTTGCTGAGGAGACCGTGCAACACGACAAGGATTTCATGCTTCCATCATATCCAAACCATCCTGGTAATGGCTACTTACATCCTATCCCTTCTGGACACAAGTCTGTGACTAATGGCCATACGGATGCTTCGACAAATAAAGCCTCAAAGGAACTCACCGAATCAGATAGAAAACAATCAAAATCGGATTCAAGTAGCTCGAGGAATGGATTAGGAAATGTCATTAGCATAGCTGCAAAATCAGTGGTTACCGTTGTTGGCATAGTGTCCGTACTGCACTTGACTGGTCTCACTCCAAAGTTTTCTAGGAAAGTTGCTTCTTTGAGGTTTCTTGACCTTTTTCGCCAGTCTGCAGCTGGAAATAATGGATCACACAATGTATGTCCTCCAGGTAAGTTCCCCGTGATGGAAGGCGGTGAAACTCGATGCATAGTGAAAGAGAGAATCGAAGTTCCGTTTTCTTCAATTATTGCTAAACCAGATGTAAACTATGGAAGCGGGTAA

Protein sequence

MEEQSTAIILARAMELRLKIRSSVNATTATAIPDDRSALDGGASRRSEAAEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLKKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGSG

Homology

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BLAST of Sed0001319 vs. NCBI nr
Match: XP_038889022.1 (plastid division protein PDV2-like [Benincasa hispida])

HSP 1 Score: 404.8 bits (1039), Expect = 6.1e-109
Identity = 226/302 (74.83%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP----DDRSALDGG----ASRRSE---- 60
           ME+QSTAIILARA ELRLKIRSSVN  T T+      DDR ++D       SRRSE    
Sbjct: 1   MEQQSTAIILARATELRLKIRSSVNTATTTSSAVTSRDDRFSVDENNGVVVSRRSEADAS 60

Query: 61  AAEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLK 120
           A E E DEE +RLLNICDALESLENQLSSLQ LQQRQRYEKE ALSEIE SRKILLDKLK
Sbjct: 61  AGEVEEDEEAVRLLNICDALESLENQLSSLQALQQRQRYEKEVALSEIEQSRKILLDKLK 120

Query: 121 KYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDAST 180
           KYKG DLEVIHEA+ F  ETVQH++D MLP YP+H GNGYLHP PSGHKSV+NG  DA+T
Sbjct: 121 KYKGGDLEVIHEASVFVGETVQHNQDLMLPPYPSHLGNGYLHPFPSGHKSVSNGLIDATT 180

Query: 181 NKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKV 240
           NKA+ EL ES+RKQSKSDS +S+NGLG  ISIAAKSVVT+VGIVS+LHLTG  PKF  KV
Sbjct: 181 NKATDELHESERKQSKSDSWNSKNGLGPFISIAAKSVVTIVGIVSILHLTGFRPKFIGKV 240

Query: 241 ASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYG 291
           A+L+  D+FRQSAAGNNGSHN CPPGKF VMEG E RCIVKERIEVPFSS++AKPDVNYG
Sbjct: 241 AALKVFDVFRQSAAGNNGSHNECPPGKFLVMEGEEARCIVKERIEVPFSSVVAKPDVNYG 300

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BLAST of Sed0001319 vs. NCBI nr
Match: XP_004137006.1 (plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypothetical protein Csa_017714 [Cucumis sativus])

HSP 1 Score: 402.9 bits (1034), Expect = 2.3e-108
Identity = 219/301 (72.76%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP----DDRSALDGG----ASRRSEA--- 60
           ME+QSTAIILARA ELRLKIRSSVN TT T       DDR ++D       SRRSEA   
Sbjct: 1   MEQQSTAIILARATELRLKIRSSVNTTTTTTSAVTSRDDRFSVDENNGVVGSRRSEADAS 60

Query: 61  AEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLKK 120
            E E DEE +RLLNICDALESLENQLSSLQDLQQRQRYEKE ALSEIEHSRKILLDKLKK
Sbjct: 61  GEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSRKILLDKLKK 120

Query: 121 YKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDASTN 180
           YKG DLEVIHE +AF  ETVQH++D MLP YP H GNGYL+PIPSGHKSV+NG  DA+ N
Sbjct: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180

Query: 181 KASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVA 240
           KA+ EL ES+RKQ KSDS  S+NG+G+ I +AAKSVVT+VGIVS+LHLTG  PKF++KVA
Sbjct: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240

Query: 241 SLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGS 291
           +L+  D+FR+SA+ NNG HN CPPGKF VME GE RC+VKERIEVPFSS++AKPDVNYGS
Sbjct: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300

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BLAST of Sed0001319 vs. NCBI nr
Match: XP_016901679.1 (PREDICTED: plastid division protein PDV2 [Cucumis melo] >KAA0031255.1 plastid division protein PDV2 [Cucumis melo var. makuwa] >TYK06706.1 plastid division protein PDV2 [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 4.4e-107
Identity = 217/305 (71.15%), Postives = 251/305 (82.30%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP--------DDRSALDGGA----SRRSE 60
           ME+Q+TAIILARA ELRLKIRSSVN TT T           DDR ++D  +    SRRSE
Sbjct: 1   MEQQNTAIILARATELRLKIRSSVNTTTTTTTTSTSAVTSRDDRFSVDENSGVVGSRRSE 60

Query: 61  A---AEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLD 120
           A    E E DEE +RLLNICDALESLENQLSSLQDLQQRQRYEKE ALSEIEHSR+ILLD
Sbjct: 61  ADASGEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSREILLD 120

Query: 121 KLKKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTD 180
           KLKKYKG DLEVIHEA+AFA ETVQH +D MLP YP H GNGYL+P PSGHKSV+NG  D
Sbjct: 121 KLKKYKGGDLEVIHEASAFAGETVQHKQDLMLPPYPTHFGNGYLYPFPSGHKSVSNGLID 180

Query: 181 ASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFS 240
           A+ NKA+ EL ES+RKQ KSDS +S+NG+G++I +AAKSVVT+VGIVS+LHLTG  PKF+
Sbjct: 181 ATENKATNELDESERKQPKSDSRNSKNGMGSLIRVAAKSVVTIVGIVSILHLTGFRPKFA 240

Query: 241 RKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDV 291
           +KVA+L+  D+FR+SA+ NNGS++ CPPGKF VME GE RC+VKERIEVPFSS++AKPDV
Sbjct: 241 KKVAALKVFDIFRRSASENNGSYDECPPGKFLVMEEGEARCVVKERIEVPFSSVVAKPDV 300

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BLAST of Sed0001319 vs. NCBI nr
Match: XP_023530122.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 plastid division protein PDV2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.6 bits (963), Expect = 4.0e-100
Identity = 206/293 (70.31%), Postives = 230/293 (78.50%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTA---TAIPDDRSALDGGASRRSEAAEGELDEE 60
           MEEQ TA+ILARA ELRLKIR SVN T     T I DDR A+D      S     E DEE
Sbjct: 1   MEEQGTAVILARATELRLKIRGSVNTTATSPETDIRDDRFAVDENNGVGSSGEAEEEDEE 60

Query: 61  GLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLKKYKGQDLEV 120
            +RLL ICDAL SLENQLSSLQDLQQRQRYEKE ALSEIEHSRKI+LDKLKKY+GQDLEV
Sbjct: 61  SVRLLKICDALASLENQLSSLQDLQQRQRYEKEVALSEIEHSRKIVLDKLKKYEGQDLEV 120

Query: 121 IHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDASTNKASKELTE 180
           IHEA+AF  ETVQH+KDF LP YP+HP   Y+HP PSGH+SVTNG TDA+TN  +KELTE
Sbjct: 121 IHEASAFVRETVQHNKDFTLPPYPSHPDKSYIHPFPSGHESVTNGLTDATTNIGTKELTE 180

Query: 181 SDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVASLRFLDLF 240
           S+RKQSKSDS +SRNGLG   S+AAKSVVTVV IVS+LH TGLTPK +RKV+SL+  ++F
Sbjct: 181 SERKQSKSDSRNSRNGLGTFASVAAKSVVTVVAIVSILHFTGLTPKLARKVSSLKVFNIF 240

Query: 241 RQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGSG 291
           R SA GNNGSHNVCPP +         +CIVKERIEVPFSS + KPDVNYG G
Sbjct: 241 RPSAVGNNGSHNVCPPVE-------AHQCIVKERIEVPFSSAVVKPDVNYGRG 286

[Close]

BLAST of Sed0001319 vs. NCBI nr
Match: KAG7011686.1 (Plastid division protein PDV2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.4 bits (960), Expect = 8.9e-100
Identity = 212/302 (70.20%), Postives = 243/302 (80.46%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAI------PDDRSALD---GGASRRSEAAE 60
           ME QSTAIILARA ELRLKIRSSVN TT ++        DDR A+D   G  SRRSEA  
Sbjct: 1   MEVQSTAIILARATELRLKIRSSVNTTTTSSAVISLENRDDRFAVDENNGVGSRRSEADA 60

Query: 61  GEL---DEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLK 120
            E+   DEE +RLLNIC ALESLENQLSSLQDLQQRQRYEKE ALSEIEHSR++LLDKLK
Sbjct: 61  IEVTEEDEEAVRLLNICGALESLENQLSSLQDLQQRQRYEKEVALSEIEHSREMLLDKLK 120

Query: 121 KYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDAST 180
           KY+G+DLEVIHEA+AF  ETVQH++D MLP YP+HPGNGYLHP PS  K V+     A+T
Sbjct: 121 KYEGEDLEVIHEASAFVGETVQHNQDLMLPPYPSHPGNGYLHPFPSALKFVS-----AAT 180

Query: 181 NKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKV 240
           NKA+KEL ES+RK SK DS +SRN LG+ ISIAAKSVVT+VGIVS+LHL G  PKF+ K+
Sbjct: 181 NKATKELNESERKHSKLDSRNSRNRLGSFISIAAKSVVTIVGIVSLLHLAGFRPKFAAKI 240

Query: 241 ASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYG 291
           A+L+ LD FR+SAA NN S + CPPGKF VME G+ RC+VKERIEVPFSS++AKPDVNYG
Sbjct: 241 AALKALDRFRRSAAVNNESRHGCPPGKFLVMENGKARCVVKERIEVPFSSVVAKPDVNYG 297

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BLAST of Sed0001319 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.9e-53
Identity = 130/311 (41.80%), Postives = 181/311 (58.20%), Query Frame = 0


Query: 2   EEQSTAIILARAMELRLKIRSSV--NATTATAIPDDRSALDGGASRRSE----------- 61
           +E+   +ILARA ELRLKI   +  ++TT +   D    L  G  R+SE           
Sbjct: 3   DEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFDS 62

Query: 62  -AAEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKL 121
            ++E   + E  RLL I DALE+LE+QL+SLQ+L+QRQ+YEK+ ALSEI++SRK+LL+KL
Sbjct: 63  ISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEKL 122

Query: 122 KKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHP--------GNGYLHPIPSGHKSV 181
           K+YKG+D EV+ E   FA E V ++ D +LP YP HP         NGYL  +PS  KS 
Sbjct: 123 KEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKSD 182

Query: 182 TNGHTDASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTG 241
            NG              E++ K     S  S +G+   +   AK V+ ++G++S+L  +G
Sbjct: 183 ANGFGSGHVR------NEAEAKSPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSASG 242

Query: 242 LTPKFSRKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSI 291
             P+  ++ ASL    L    A     + N CPPGK  V+E GE RC+VKER+E+PF S+
Sbjct: 243 YGPEMRKRGASLNLFGLLPHRATRGKRTPNQCPPGKVLVIEDGEARCLVKERVEIPFDSV 302

[Close]

BLAST of Sed0001319 vs. ExPASy TrEMBL
Match: A0A0A0K6S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 219/301 (72.76%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP----DDRSALDGG----ASRRSEA--- 60
           ME+QSTAIILARA ELRLKIRSSVN TT T       DDR ++D       SRRSEA   
Sbjct: 1   MEQQSTAIILARATELRLKIRSSVNTTTTTTSAVTSRDDRFSVDENNGVVGSRRSEADAS 60

Query: 61  AEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLKK 120
            E E DEE +RLLNICDALESLENQLSSLQDLQQRQRYEKE ALSEIEHSRKILLDKLKK
Sbjct: 61  GEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSRKILLDKLKK 120

Query: 121 YKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDASTN 180
           YKG DLEVIHE +AF  ETVQH++D MLP YP H GNGYL+PIPSGHKSV+NG  DA+ N
Sbjct: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180

Query: 181 KASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVA 240
           KA+ EL ES+RKQ KSDS  S+NG+G+ I +AAKSVVT+VGIVS+LHLTG  PKF++KVA
Sbjct: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240

Query: 241 SLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGS 291
           +L+  D+FR+SA+ NNG HN CPPGKF VME GE RC+VKERIEVPFSS++AKPDVNYGS
Sbjct: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300

[Close]

BLAST of Sed0001319 vs. ExPASy TrEMBL
Match: A0A5D3C8Q3 (Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00070 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 217/305 (71.15%), Postives = 251/305 (82.30%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP--------DDRSALDGGA----SRRSE 60
           ME+Q+TAIILARA ELRLKIRSSVN TT T           DDR ++D  +    SRRSE
Sbjct: 1   MEQQNTAIILARATELRLKIRSSVNTTTTTTTTSTSAVTSRDDRFSVDENSGVVGSRRSE 60

Query: 61  A---AEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLD 120
           A    E E DEE +RLLNICDALESLENQLSSLQDLQQRQRYEKE ALSEIEHSR+ILLD
Sbjct: 61  ADASGEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSREILLD 120

Query: 121 KLKKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTD 180
           KLKKYKG DLEVIHEA+AFA ETVQH +D MLP YP H GNGYL+P PSGHKSV+NG  D
Sbjct: 121 KLKKYKGGDLEVIHEASAFAGETVQHKQDLMLPPYPTHFGNGYLYPFPSGHKSVSNGLID 180

Query: 181 ASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFS 240
           A+ NKA+ EL ES+RKQ KSDS +S+NG+G++I +AAKSVVT+VGIVS+LHLTG  PKF+
Sbjct: 181 ATENKATNELDESERKQPKSDSRNSKNGMGSLIRVAAKSVVTIVGIVSILHLTGFRPKFA 240

Query: 241 RKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDV 291
           +KVA+L+  D+FR+SA+ NNGS++ CPPGKF VME GE RC+VKERIEVPFSS++AKPDV
Sbjct: 241 KKVAALKVFDIFRRSASENNGSYDECPPGKFLVMEEGEARCVVKERIEVPFSSVVAKPDV 300

[Close]

BLAST of Sed0001319 vs. ExPASy TrEMBL
Match: A0A1S4E0D9 (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 217/305 (71.15%), Postives = 251/305 (82.30%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAIP--------DDRSALDGGA----SRRSE 60
           ME+Q+TAIILARA ELRLKIRSSVN TT T           DDR ++D  +    SRRSE
Sbjct: 1   MEQQNTAIILARATELRLKIRSSVNTTTTTTTTSTSAVTSRDDRFSVDENSGVVGSRRSE 60

Query: 61  A---AEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLD 120
           A    E E DEE +RLLNICDALESLENQLSSLQDLQQRQRYEKE ALSEIEHSR+ILLD
Sbjct: 61  ADASGEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSREILLD 120

Query: 121 KLKKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTD 180
           KLKKYKG DLEVIHEA+AFA ETVQH +D MLP YP H GNGYL+P PSGHKSV+NG  D
Sbjct: 121 KLKKYKGGDLEVIHEASAFAGETVQHKQDLMLPPYPTHFGNGYLYPFPSGHKSVSNGLID 180

Query: 181 ASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFS 240
           A+ NKA+ EL ES+RKQ KSDS +S+NG+G++I +AAKSVVT+VGIVS+LHLTG  PKF+
Sbjct: 181 ATENKATNELDESERKQPKSDSRNSKNGMGSLIRVAAKSVVTIVGIVSILHLTGFRPKFA 240

Query: 241 RKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDV 291
           +KVA+L+  D+FR+SA+ NNGS++ CPPGKF VME GE RC+VKERIEVPFSS++AKPDV
Sbjct: 241 KKVAALKVFDIFRRSASENNGSYDECPPGKFLVMEEGEARCVVKERIEVPFSSVVAKPDV 300

[Close]

BLAST of Sed0001319 vs. ExPASy TrEMBL
Match: A0A6J1GM44 (plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111455497 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 7.3e-100
Identity = 212/302 (70.20%), Postives = 243/302 (80.46%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTATAI------PDDRSALD---GGASRRSEAAE 60
           ME QSTAIILARA ELRLKIRSSVN TT ++        DDR A+D   G  SRRSEA  
Sbjct: 1   MEVQSTAIILARATELRLKIRSSVNTTTTSSAVISLENRDDRFAVDENNGVGSRRSEADA 60

Query: 61  GEL---DEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLK 120
            E+   DEE +RLLNIC ALESLENQLSSLQDLQQRQRYEKE ALSEIEHSR++LLDKLK
Sbjct: 61  IEVTEEDEEEVRLLNICGALESLENQLSSLQDLQQRQRYEKEVALSEIEHSREMLLDKLK 120

Query: 121 KYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDAST 180
           KY+G+DLEVIHEA+AF  ETVQH++D MLP YP+HPGNGYLHP PS  K V+     A+T
Sbjct: 121 KYEGEDLEVIHEASAFVGETVQHNQDLMLPPYPSHPGNGYLHPFPSALKFVS-----AAT 180

Query: 181 NKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKV 240
           NKA+KEL ES+RK SK DS +SRN LG+ ISIAAKSVVT+VGIVS+LHL G  PKF+ K+
Sbjct: 181 NKATKELNESERKHSKLDSRNSRNRLGSFISIAAKSVVTIVGIVSLLHLAGFRPKFAAKI 240

Query: 241 ASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYG 291
           A+L+ LD FR+SAA NN S + CPPGKF VME G+ RC+VKERIEVPFSS++AKPDVNYG
Sbjct: 241 AALKALDRFRRSAAVNNESRHGCPPGKFLVMENGKARCVVKERIEVPFSSVVAKPDVNYG 297

[Close]

BLAST of Sed0001319 vs. ExPASy TrEMBL
Match: A0A6J1JIG6 (plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111486094 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99
Identity = 209/296 (70.61%), Postives = 234/296 (79.05%), Query Frame = 0


Query: 1   MEEQSTAIILARAMELRLKIRSSVNATTA---TAIPDDRSALDGGASRRSEAAEGELDEE 60
           MEEQ TAIILARA ELRLKIR SVN TT+   T I DDR A+D      S     E DEE
Sbjct: 1   MEEQGTAIILARATELRLKIRGSVNTTTSSPETDIRDDRFAVDENNGVGSSGEAEEEDEE 60

Query: 61  GLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKLKKYKGQDLEV 120
            +RLL ICDAL SLENQLSSLQDLQQRQRYEKE ALSEIEHSRKI+LDKLKKY+GQDLEV
Sbjct: 61  SVRLLKICDALASLENQLSSLQDLQQRQRYEKEVALSEIEHSRKIVLDKLKKYQGQDLEV 120

Query: 121 IHEAAAFAEETVQHDKDFMLPSYPNHPGNGYLHPIPSGHKSVTNGHTDASTNKASKELTE 180
           IHEA+AF  ETVQH+KDFMLP YP+HP   Y HP PSGH+SVTNG TD +TN A+KELTE
Sbjct: 121 IHEASAFVRETVQHNKDFMLPPYPSHPDKSYTHPFPSGHESVTNGLTDTTTNIATKELTE 180

Query: 181 SDRKQSKS---DSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVASLRFL 240
           S+RKQSKS   +S +SRNGLG   S+AAKSVVTVV IVS+LHLTGLTPKF+RKV+SL+  
Sbjct: 181 SERKQSKSHSRNSRNSRNGLGTFASVAAKSVVTVVAIVSILHLTGLTPKFARKVSSLKVF 240

Query: 241 DLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGSG 291
           ++FR SAAG+NGSHNVC P +         +CIVKERIEVPFSS + KPDVNYG G
Sbjct: 241 NIFRPSAAGSNGSHNVCSPVE-------AHQCIVKERIEVPFSSAVVKPDVNYGRG 289

[Close]

BLAST of Sed0001319 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 )

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-54
Identity = 130/311 (41.80%), Postives = 181/311 (58.20%), Query Frame = 0


Query: 2   EEQSTAIILARAMELRLKIRSSV--NATTATAIPDDRSALDGGASRRSE----------- 61
           +E+   +ILARA ELRLKI   +  ++TT +   D    L  G  R+SE           
Sbjct: 3   DEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFDS 62

Query: 62  -AAEGELDEEGLRLLNICDALESLENQLSSLQDLQQRQRYEKEAALSEIEHSRKILLDKL 121
            ++E   + E  RLL I DALE+LE+QL+SLQ+L+QRQ+YEK+ ALSEI++SRK+LL+KL
Sbjct: 63  ISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEKL 122

Query: 122 KKYKGQDLEVIHEAAAFAEETVQHDKDFMLPSYPNHP--------GNGYLHPIPSGHKSV 181
           K+YKG+D EV+ E   FA E V ++ D +LP YP HP         NGYL  +PS  KS 
Sbjct: 123 KEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKSD 182

Query: 182 TNGHTDASTNKASKELTESDRKQSKSDSSSSRNGLGNVISIAAKSVVTVVGIVSVLHLTG 241
            NG              E++ K     S  S +G+   +   AK V+ ++G++S+L  +G
Sbjct: 183 ANGFGSGHVR------NEAEAKSPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSASG 242

Query: 242 LTPKFSRKVASLRFLDLFRQSAAGNNGSHNVCPPGKFPVMEGGETRCIVKERIEVPFSSI 291
             P+  ++ ASL    L    A     + N CPPGK  V+E GE RC+VKER+E+PF S+
Sbjct: 243 YGPEMRKRGASLNLFGLLPHRATRGKRTPNQCPPGKVLVIEDGEARCLVKERVEIPFDSV 302

[Close]

BLAST of Sed0001319 vs. TAIR 10
Match: AT2G16070.1 (plastid division2 )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 94/220 (42.73%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 79  QDLQQRQRYEKEAALSEIEHSRKILLDKLKKYKGQDLEVIHEAAAFAEETVQHDKDFMLP 138
           Q+L+QRQ+YEK+ ALSEI++SRK+LL+KLK+YKG+D EV+ E   FA E V ++ D +LP
Sbjct: 11  QNLRQRQQYEKQLALSEIDYSRKMLLEKLKEYKGKDFEVLRETTTFAGERVDYENDLLLP 70

Query: 139 SYPNHP--------GNGYLHPIPSGHKSVTNGHTDASTNKASKELTESDRKQSKSDSSSS 198
            YP HP         NGYL  +PS  KS  NG              E++ K     S  S
Sbjct: 71  PYPVHPPLSLGLDNNNGYLSHLPSKKKSDANGFGSGHVR------NEAEAKSPNGGSGGS 130

Query: 199 RNGLGNVISIAAKSVVTVVGIVSVLHLTGLTPKFSRKVASLRFLDLFRQSAAGNNGSHNV 258
            +G+   +   AK V+ ++G++S+L  +G  P+  ++ ASL    L    A     + N 
Sbjct: 131 SHGVIRFLGSVAKIVLPIIGVISLLSASGYGPEMRKRGASLNLFGLLPHRATRGKRTPNQ 190

Query: 259 CPPGKFPVMEGGETRCIVKERIEVPFSSIIAKPDVNYGSG 291
           CPPGK  V+E GE RC+VKER+E+PF S++AK DV YG G
Sbjct: 191 CPPGKVLVIEDGEARCLVKERVEIPFDSVVAKRDVTYGYG 224

The following BLAST results are available for this feature:

BLAST of Sed0001319 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889022.1	6.1e-109	74.83	plastid division protein PDV2-like [Benincasa hispida]	[more]
XP_004137006.1	2.3e-108	72.76	plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypothetical protein...	[more]
XP_016901679.1	4.4e-107	71.15	PREDICTED: plastid division protein PDV2 [Cucumis melo] >KAA0031255.1 plastid di...	[more]
XP_023530122.1	4.0e-100	70.31	plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 ...	[more]
KAG7011686.1	8.9e-100	70.20	Plastid division protein PDV2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0001319 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XII1	2.9e-53	41.80	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]

BLAST of Sed0001319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6S0	1.1e-108	72.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1	[more]
A0A5D3C8Q3	2.1e-107	71.15	Plastid division protein PDV2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S4E0D9	2.1e-107	71.15	plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1	[more]
A0A6J1GM44	7.3e-100	70.20	plastid division protein PDV2-like OS=Cucurbita moschata OX=3662 GN=LOC111455497...	[more]
A0A6J1JIG6	1.6e-99	70.61	plastid division protein PDV2-like OS=Cucurbita maxima OX=3661 GN=LOC111486094 P...	[more]

BLAST of Sed0001319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16070.2	2.1e-54	41.80	plastid division2	[more]
AT2G16070.1	1.4e-42	42.73	plastid division2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..192
None	No IPR available	PANTHER	PTHR33600:SF3	PLASTID DIVISION PROTEIN PDV2	coord: 1..290
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	PLASTID DIVISION PROTEIN PDV2	coord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001319.1	Sed0001319.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005488	binding