Sed0001266 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTGATCAACCAAGCAAAGTTTGAGGACTTTTGGAACTCATCAGCAATACAATGTTTTATCACTTATAAATACCAACTTACAAGAAAAGAAAATGGCTCATAGGCATCTTCTTCTCCCATAGCCATTCTCCTTTTCACCATGGACATTCAAGTCATTCAGACAAAAGTTCTCCAACACAAAGACCAGATAACTGTTGTAGCAGCAGCTTCAGCGATTCTTTCGTTGTTCGTATACGCCGCCCCTCGGTTTCTAAGCATTCTAGCATTCTTTTGGCCTCTTTTTCTCTCGACAGCCGTACTCTTCGTGGTAATTACTGCTTTTGGAGGAGGTTTCCATGTTGGAACCGAAGGTCATGGCGTAAGAGCAGGTGAAAGGATCCTAGATTACGTAGCAGGGCGGCCTGAATACGCCGAATACCATTATAGGTACCAATAAGAGATCGTTTGTCGCTTGTTGGCCATAATTTAGACACCGATGACTCGAAATTCGTCTATGTCTGCTCACTTTGTATACTAAAGAATTTGTGATAAACACATGTATTCAATTCTAAAATGGTTGTGTAATGGTTGAGTGCTCAAGGAAGGGGAGGTTCCAAACTACCTCAAATACTTGAGTTATCTTGTAGTTTTCTTTTATCTCTTACCTTTCAATAAATTTGGGTTCTATTATAGAATCACAAGAAAGCAATGTGTTCAAGTATCAACCATTCAAACTTGTTGAATGGTTTATATGGGTTGGATAGTGTTGAGATATGTCTTCAATGCATTAATGCCCTACGATTAGTAGTTGGGGGTCTCACTGCCCGGTCAGCGAGCGGGGTGAATGAGAGTGTCCCCATTGCGCAAACAACTTTTCTCATTGCATACCATTGCTTCGCGCATAGCAGCAATGCAAGTCCAACCCACATTCGCACTCTACAATGCTAGCACTTCTGCATTATGTTGTGCGTTTTGCGTGTGATAGCGCATCTGCATTCTATTTAATACTTATGCATTCTGTAATAGGGTTTAATGAGAGTGCA GCTGATCAACCAAGCAAAGTTTGAGGACTTTTGGAACTCATCAGCAATACAATGTTTTATCACTTATAAATACCAACTTACAAGAAAAGAAAATGGCTCATAGGCATCTTCTTCTCCCATAGCCATTCTCCTTTTCACCATGGACATTCAAGTCATTCAGACAAAAGTTCTCCAACACAAAGACCAGATAACTGTTGTAGCAGCAGCTTCAGCGATTCTTTCGTTGTTCGTATACGCCGCCCCTCGGTTTCTAAGCATTCTAGCATTCTTTTGGCCTCTTTTTCTCTCGACAGCCGTACTCTTCGTGGTAATTACTGCTTTTGGAGGAGGTTTCCATGTTGGAACCGAAGGTCATGGCGTAAGAGCAGGTGAAAGGATCCTAGATTACGTAGCAGGGCGGCCTGAATACGCCGAATACCATTATAGGTACCAATAAGAGATCGTTTGTCGCTTGTTGGCCATAATTTAGACACCGATGACTCGAAATTCGTCTATGTCTGCTCACTTTGTATACTAAAGAATTTGTGATAAACACATGTATTCAATTCTAAAATGGTTGTGTAATGGTTGAGTGCTCAAGGAAGGGGAGGTTCCAAACTACCTCAAATACTTGAGTTATCTTGTAGTTTTCTTTTATCTCTTACCTTTCAATAAATTTGGGTTCTATTATAGAATCACAAGAAAGCAATGTGTTCAAGTATCAACCATTCAAACTTGTTGAATGGTTTATATGGGTTGGATAGTGTTGAGATATGTCTTCAATGCATTAATGCCCTACGATTAGTAGTTGGGGGTCTCACTGCCCGGTCAGCGAGCGGGGTGAATGAGAGTGTCCCCATTGCGCAAACAACTTTTCTCATTGCATACCATTGCTTCGCGCATAGCAGCAATGCAAGTCCAACCCACATTCGCACTCTACAATGCTAGCACTTCTGCATTATGTTGTGCGTTTTGCGTGTGATAGCGCATCTGCATTCTATTTAATACTTATGCATTCTGTAATAGGGTTTAATGAGAGTGCA ATGGACATTCAAGTCATTCAGACAAAAGTTCTCCAACACAAAGACCAGATAACTGTTGTAGCAGCAGCTTCAGCGATTCTTTCGTTGTTCGTATACGCCGCCCCTCGGTTTCTAAGCATTCTAGCATTCTTTTGGCCTCTTTTTCTCTCGACAGCCGTACTCTTCGTGGTAATTACTGCTTTTGGAGGAGGTTTCCATGTTGGAACCGAAGGTCATGGCGTAAGAGCAGGTGAAAGGATCCTAGATTACGTAGCAGGGCGGCCTGAATACGCCGAATACCATTATAGGTACCAATAA MDIQVIQTKVLQHKDQITVVAAASAILSLFVYAAPRFLSILAFFWPLFLSTAVLFVVITAFGGGFHVGTEGHGVRAGERILDYVAGRPEYAEYHYRYQ Homology
BLAST of Sed0001266 vs. NCBI nr
Match: KAG7012637.1 (hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.5 bits (415), Expect = 4.7e-37 Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of Sed0001266 vs. NCBI nr
Match: KAG6573520.1 (hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36 Identity = 84/98 (85.71%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of Sed0001266 vs. NCBI nr
Match: KAA0042343.1 (hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa] >TYK15467.1 hypothetical protein E5676_scaffold477G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 143.7 bits (361), Expect = 8.6e-31 Identity = 75/93 (80.65%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0001266 vs. NCBI nr
Match: KGN64996.1 (hypothetical protein Csa_022896 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Sed0001266 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-19 Identity = 63/95 (66.32%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of Sed0001266 vs. ExPASy TrEMBL
Match: A0A5D3CU44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00380 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31 Identity = 75/93 (80.65%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of Sed0001266 vs. ExPASy TrEMBL
Match: A0A0A0LYI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173160 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.4e-31 Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Sed0001266 vs. ExPASy TrEMBL
Match: A0A396J444 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0290401 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of Sed0001266 vs. ExPASy TrEMBL
Match: A0A151T6F9 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_017189 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.2e-15 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Sed0001266 vs. ExPASy TrEMBL
Match: A0A2N9EZM9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8190 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15 Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Sed0001266 vs. TAIR 10
Match: AT4G16400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 8.6e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of Sed0001266 vs. TAIR 10
Match: AT3G13175.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 6.6e-05 Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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