Sed0001231 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACGGTTTTACCCTTTATTTCTTTCACTCATATTCATCAAAGGGTCCGCCAGTTCGTCAAAGTCGCGATCGTCTTTTCCAATCTCTCTGCAAATCGGATTCGAAAATGGTAAAACCCTAAATTTCTTCAGATTTGTAGCTTGGATTCTTCTCTTACGCTTAGTTTTTACGTTTGATTAGGTTTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCTGTCGTCAACGCTCTGCCTGTTCTGTTCTACATAATTATGGTATGCTAATATGATTCAATTCCCTTTAGGATCTAATATTTTTGTCTGTTCGTCAAATTCGCTTCATGATTTGGGTTTTCTGTACCATTGAAGGGAATTTTTGCTGATATTTATTTTTCCCCCTTTTTGGTTTTTCTTCAATTTTCTGCTAGGGCAAAATTTATGGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTGCCGCCGGCTTGTCCTTATCGCCCTGCTGCTAAGCAAAATAGCAATGTGAGTGTCCTGTTATTGCTTGCTTCTACGTTATTTCTGATTTCCATTTGATTTAAGGCTGCTCATTGTGATGATAGTTTTCAAAAGCAATGAATGGAGTCTTTGCACCTGCTGTATGTGTTTGTTTATTGATTCCTCAACTATCATTTCAATTGTTTGAGCATACTGAGGATTTTTTACAGGGTTGTGCTGGGTTGTTTTTGTTGTGTCTACTAGCTCGGTCTTTGTTCTTGATCTTCTTATTTATGATTTTCTTCATGTTGAATGAATGCTTGTTGATATTTGCTACGGTAGTTTTCAAAAGCAAATAGGTATCTTCTATCGAGTTTAGATTTTGGGCAGTGATAGGATATTCTATTCTCTTTGGTATGTGGAGGTAGATACATGTTTCCAGTTTACTAGATCAGGGATAAAAGTCAATTCCCTTTAGGACATCATAAAAAAATGATATGCATGTTTGAAATAATATTTAGCTATGGTCCCCCAGGGGTGCTGCAATAGTTGAAGACTTGGACTTTGAGGGTATGTTCCCCTCAAGGTCCCGGGTTTGAGACTCATTTGTGACATTACTCCTTCGATATCTATGGTGCCAGACTTAGGGACGGGCTTGGTTACCTTGTTTCAAAAAAAAAAAAATGATATTTAGCCATGATTATAAATTTAGATCATAATGTTGATTAGGTACTTGTGAGTCTGTGACCAGTATGTTTTCATGGTAGGATAGTTTTAGATTAGTAATGACAACTTAAACAGGTTCAATTTTAGAGGTCATAATATTTTTCGTTCTTGAGTTATGAGGTGGTTTTTGGAAAAAAGATTACAAGATAACCATTCAAAGGTTTTCTTAAGCTGATGCCTGAGGCTCACTCTGTGGACTGTGGCAATGTTCTAATGTAGGTTTGAGATTTTCTCCTTGACAATAAGAGGGTTATGGCCCATGAAAATGTACTAAGGCTCAAAATTGATTAAAATAATACTATTAAAATATCCCATTCTTAAAAAATATGAAGGTTCCTTTGTAATGGTAATATTAATATATGAATGGGAGCAATTCAACCTATTACTAATTTTACTATCCCGCCTCTAAAAACATCGAAGAAAAATTCATGGAATAAGTCTATTCTACACATGATAATAGTGGTAAGGTTAAGAATCACCTAATAAAATTTAGCCTTTTAAAATATTGGCACAGGGTCTTAGGACCTGCCGGAATCGCTCTTTCAATTTGATGACATTCATATATTTTTCTCCTCCACCAATTTTCTGTACCTTAAACTGATAATGATTCCATGAGTATACTCAAGCTACAGAAAAACTTCAAAGATTCATTGCAAACTAACCCTGAGAATAAGGAGTATGGACATAACTATATGTGTTTTCACCTGTGTAAACGAGGTGTTTATTTGTATTTGTTTGTATTTTGGTGTTTTCTTATGTCAGGCTTGTTAACAACATATATGTGGGGTGTTCGATATTAGACCTATCGTTTTGTGGTTTTATTTTGCAAGGTTTGCTCCTCTGGCTGCTTGAATGTAACAAGCTTTTTCTTAATCTTAACAGGAAGAGTTAGAACCTCTAGCTGGTCAGCAACATCCACAACCTCCAAAAGCCGTGGATGCAAAGCAAGATTGAATCTGGAAATATCTGTTGTACATAGCTGTCAGCCAGAACGAAAGATCTTTGTGGCCCTGAAAGCAGTGGACTCTGTCGATTTTAGGAAGCTATGATTTCCAATCGGTCAGATAAAATATATTTTATATTCTCGTTATTAATAGCATCAATACAGTTTATCTTTTCAGTGCATGCTTTCTGAATAACATCATTATAGACATTGTGTTTATGCTTTCTGAATAATTTAGCTGCATGGCTTGGATA GACGGTTTTACCCTTTATTTCTTTCACTCATATTCATCAAAGGGTCCGCCAGTTCGTCAAAGTCGCGATCGTCTTTTCCAATCTCTCTGCAAATCGGATTCGAAAATGGTTTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCTGTCGTCAACGCTCTGCCTGTTCTGTTCTACATAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTGCCGCCGGCTTGTCCTTATCGCCCTGCTGCTAAGCAAAATAGCAATGAAGAGTTAGAACCTCTAGCTGGTCAGCAACATCCACAACCTCCAAAAGCCGTGGATGCAAAGCAAGATTGAATCTGGAAATATCTGTTGTACATAGCTGTCAGCCAGAACGAAAGATCTTTGTGGCCCTGAAAGCAGTGGACTCTGTCGATTTTAGGAAGCTATGATTTCCAATCGGTCAGATAAAATATATTTTATATTCTCGTTATTAATAGCATCAATACAGTTTATCTTTTCAGTGCATGCTTTCTGAATAACATCATTATAGACATTGTGTTTATGCTTTCTGAATAATTTAGCTGCATGGCTTGGATA ATGGTTTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCTGTCGTCAACGCTCTGCCTGTTCTGTTCTACATAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATATAGAAAACCACAGAGGGTGCCGCCGGCTTGTCCTTATCGCCCTGCTGCTAAGCAAAATAGCAATGAAGAGTTAGAACCTCTAGCTGGTCAGCAACATCCACAACCTCCAAAAGCCGTGGATGCAAAGCAAGATTGA MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD Homology
BLAST of Sed0001231 vs. NCBI nr
Match: XP_038903023.1 (uncharacterized protein LOC120089725 [Benincasa hispida]) HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32 Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Sed0001231 vs. NCBI nr
Match: XP_008442719.1 (PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo] >XP_011651967.1 uncharacterized protein LOC105434961 [Cucumis sativus] >KGN58993.1 hypothetical protein Csa_002586 [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Sed0001231 vs. NCBI nr
Match: XP_023538875.1 (uncharacterized protein LOC111799671 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31 Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Sed0001231 vs. NCBI nr
Match: XP_022983172.1 (uncharacterized protein LOC111481805 [Cucurbita maxima]) HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Sed0001231 vs. NCBI nr
Match: KAG6596489.1 (hypothetical protein SDJN03_09669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.1 bits (362), Expect = 5.5e-31 Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of Sed0001231 vs. ExPASy TrEMBL
Match: A0A0A0LB44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.4e-32 Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Sed0001231 vs. ExPASy TrEMBL
Match: A0A1S3B744 (uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.4e-32 Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Sed0001231 vs. ExPASy TrEMBL
Match: A0A6J1IYJ1 (uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Sed0001231 vs. ExPASy TrEMBL
Match: A0A6J1CU80 (uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014385 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.3e-30 Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of Sed0001231 vs. ExPASy TrEMBL
Match: A0A6J1F5U6 (uncharacterized protein LOC111442415 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442415 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-30 Identity = 73/82 (89.02%), Postives = 74/82 (90.24%), Query Frame = 0
BLAST of Sed0001231 vs. TAIR 10
Match: AT5G03460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 2.2e-14 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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