Sed0001228 (gene) Chayote v1

Overview


Name	Sed0001228
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	LG08: 28961187 .. 28964526 (-)
RNA-Seq Expression	Sed0001228
Synteny	Sed0001228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGTCAAAGCAGCCAATTTTTGCGCTTATCCTTCATCCTCGTGATAGGTTTTTGCTTTGTTGAAGACAACAATGGCGACCGGAATCCTGAAGAGGGCAATATGTAGGGTTTCTGCAACTCCACCTTCAAGATTCCTCCGAGTTCGATCCCACGCTTCGGAAGCCGAAGCCCAAAAGGCCGAGCCAAAAGCAGCCGTGTCTTCCACCCTCAAAACCTTCGCAATCTACCGATGGAACCCGGACAATCCATCATCCCCTTCGAAGCCAGTTCTTGAGGAATACGAGATCGATCTCAAAGAATGCGGTCCCATGGTGCTGGATGCCCTAATCAAAATCAAGAACGAAATCGACCCGACTCTCACCTTCCGCCGCTCCTGCCGGGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGACGGATGCAATGGCTTGGCCTGCTTGACCAAGATTCCCTCCGGTGCTTCGTCTTCCATTACGCCGCTGCCGCATATGTATGTGATCAAGGATCTGGTGGTGGACATGACCAACTTTTACAGCCAGTATAAGAGCATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGCCGGTGCCGGGGAAGGAGATTTTGCAGAGTAAGAAAGATAGGGCGAAGTTGGATGGGATGTATGAGTGTATACTGTGTGCTTGTTGCAGTACGTCCTGCCCTAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCTGCTTTGCTCCATGCCAATAGGTAATTTCTTTTCTCCACTTTGCTTGGTTTGGTTGTTCTTTGTTTTTCTGTTTGTTAGACATGAATAGAAAACAGGGGCTGTTTAGAGGGATTTAGAAGCTATTTGAAGGCTGTATTTGGGTTCTCGTGCTTATTCCTGAACTCTTGGGGATCCTGTACAGCCCGAACATGAGAGTTCTTGGACGCTCAGACCCCTTCTTACAATCATAAGTTGGATGTTCGAAATCCCAAGAATTAAGACTTGTTTTTTCCTTTGCTATCTCTTATATAATAGACTCTAATAATGACCCTCTCCTCTTGTAACAATAACATGTAATCAATGAAGCTGTTTTAGTTTCAATTCCTTAAAAAAAAAAATAGTTGGCAACAATAATTTGGAAAGTTGGGTATTCTGTTAGAGTAGCTAGGAAGCGTTTAAATGAAAAGCATGAAGATGATGCATCTACTTATCCAGCATATGGATGGATAGGGGAGATTATGAGGGTTTGTGTATATAATGTTGCTACTATAGAGAGTTTGATATCTATGATTGTCCACGCTAGCTTGTGTGTATCTCGACTATTCTCACGACACCTTGTGAATGACTCTAAAACATTTAGATGTCAAGGAAATCTGTAACTTTTTTTTAGTATATGTGATTGTTTGAGATACCTTGCATATACCTCGACTCGACTATGTCACGACACGTATTGTATGACTCTACAACATTTTGATGTCAAGAAAACTTGTAGGAAATTAATTTTTAAGAAGGTGACCACCATGGATTAAACCCATCACCTCTTAGTTCTTCAAAGCCCTCCTGACCCCTAGGTCACTCATATTGCTATTCAAACTAGAGAAAGGAAACTATTGAAATTTGAAGGTAAAAACAGCTGAAAACGAATGAAGATAACTTAACAAAAGAATGGACCTACAATACAACAAGCATATACCTCTTGCAGTCAAACAAATCAGTCATTTGAAATTTCACAAATCACAAGCTTGTACCTCATCAAGGATATAGTCAGGTTACGACAAGAGTGGATATATCCTCGGGGCGGGGTCAGGGAACACCAAAATTCATCCCCGTCCCCTTGAAAATTCCCATTTTTTTTTCTCGGGAATTCCCCGTGGGAATCGGGTTCTTCACAAGGATTTTTTCAATTAATTTAATTTTTCTATTTTTTTACATATTTTTTTGGACAATAATTTCAAATAATTAGAATTTCTTAGAAAATATCTATAAGTTTGAACTACATTGTTAATTATTAAAGAAAAATATTCACATGCATAGGTAATTTCACCCACAAATATATTTTTATTTAAATGGGGCGGAGATTGGGAAAACGGGGAAATGGGGATTGGGAATACATTCCCCGCCCCCTACCCTATTCCGTGCGGTTAAAATGGACATCTCTAAACAAGAGCAGTAGCTCAGCGGTATTAATGTACACCCAAAGACCAAGAAGTTATGGGTTCGAATACCCCCGCCCTCAATTGTTGTAATCTCAAAAAATATATATATATATATAGTCAGGTTACGTTGTCTCAGTTTTTAGAGGTTTTCATTCTTCTGCTCGTGAAATAGACCCTTGCAGGTGGTACTTTTACAAATTGATCGATTTATTTCCTATTGTATAAAAAATCAAGTAATTTCATTTGGTTGTTTTATCTATGTTCAACTAAGTCTTGATATCCAAAAAAATTACTCAATGATGTTATAGCCAACTCGATTGTGGTGACGTCTGAGAGCCAGGATTTAGGACATGATATGCTTCATACAACTATTAAGACCTTAACGTTTTATAAATTATATCTCAGGAGAATTTTCTTCAATATTTTACTGACATTGTACTAGATGGAGAAACTTGTACTTGTTCTATTTGGCATTGCATTTTTTAATGCATTGCAGTCGTAAGAGAACTTAAAATCAATAAATGCTGTGGATTGGGCTATGATTAATTTGGTATTGCAGTTGTATATTATATTATTATGTATAGTTTGATTAATTTGTTCCATTCTTTCACCATGACACATATGGCTATGATGTAATTGATTATGAAATTGCTCTTTATTGCCTGCAATGACTATTCTTTTCTTTTAATTTTTATCAAGGATACAATTTTTTTAATTGCAAAAGTGTCGTCTTGATTCCCATTTGTACAAGCAGGTGGATAAGCGATAGCCGTGATGAATACACGAAGGAGCGTCTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCGCCCGTGCCTGTCCAAAGGGCTTGAACCCTGGAAAACAGATCCAACATATCAAAAAGCTTCAGCTTGTGGGTTGAGAGCCTAAGTTTCTCTAGGTACAATAATGTTCTTTTAATTCAGTTAAGGAATGTCTTGTTGAGTAGTTCACTCATGAGCGATGTGATTTTGATCGAATAACATGTGGATCATTCACTTTTCCACCATGCTGTACCCATCATTGGGTTTTTTTAAAGTATTTATCTGTCCCCAAATAAATGTTGATAGAGAAACCTCTTGGCTTCATCTATAGTTCTGCTATCATCTATGATCATCCTTTATTGACATTATTTGATTAAAAATGGTGTTGATTTGT

mRNA sequence

ATTAGTCAAAGCAGCCAATTTTTGCGCTTATCCTTCATCCTCGTGATAGGTTTTTGCTTTGTTGAAGACAACAATGGCGACCGGAATCCTGAAGAGGGCAATATGTAGGGTTTCTGCAACTCCACCTTCAAGATTCCTCCGAGTTCGATCCCACGCTTCGGAAGCCGAAGCCCAAAAGGCCGAGCCAAAAGCAGCCGTGTCTTCCACCCTCAAAACCTTCGCAATCTACCGATGGAACCCGGACAATCCATCATCCCCTTCGAAGCCAGTTCTTGAGGAATACGAGATCGATCTCAAAGAATGCGGTCCCATGGTGCTGGATGCCCTAATCAAAATCAAGAACGAAATCGACCCGACTCTCACCTTCCGCCGCTCCTGCCGGGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGACGGATGCAATGGCTTGGCCTGCTTGACCAAGATTCCCTCCGGTGCTTCGTCTTCCATTACGCCGCTGCCGCATATGTATGTGATCAAGGATCTGGTGGTGGACATGACCAACTTTTACAGCCAGTATAAGAGCATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGCCGGTGCCGGGGAAGGAGATTTTGCAGAGTAAGAAAGATAGGGCGAAGTTGGATGGGATGTATGAGTGTATACTGTGTGCTTGTTGCAGTACGTCCTGCCCTAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCTGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATACACGAAGGAGCGTCTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCGCCCGTGCCTGTCCAAAGGGCTTGAACCCTGGAAAACAGATCCAACATATCAAAAAGCTTCAGCTTGTGGGTTGAGAGCCTAAGTTTCTCTAGGTACAATAATGTTCTTTTAATTCAGTTAAGGAATGTCTTGTTGAGTAGTTCACTCATGAGCGATGTGATTTTGATCGAATAACATGTGGATCATTCACTTTTCCACCATGCTGTACCCATCATTGGGTTTTTTTAAAGTATTTATCTGTCCCCAAATAAATGTTGATAGAGAAACCTCTTGGCTTCATCTATAGTTCTGCTATCATCTATGATCATCCTTTATTGACATTATTTGATTAAAAATGGTGTTGATTTGT

Coding sequence (CDS)

ATGGCGACCGGAATCCTGAAGAGGGCAATATGTAGGGTTTCTGCAACTCCACCTTCAAGATTCCTCCGAGTTCGATCCCACGCTTCGGAAGCCGAAGCCCAAAAGGCCGAGCCAAAAGCAGCCGTGTCTTCCACCCTCAAAACCTTCGCAATCTACCGATGGAACCCGGACAATCCATCATCCCCTTCGAAGCCAGTTCTTGAGGAATACGAGATCGATCTCAAAGAATGCGGTCCCATGGTGCTGGATGCCCTAATCAAAATCAAGAACGAAATCGACCCGACTCTCACCTTCCGCCGCTCCTGCCGGGAGGGGATCTGCGGCTCCTGTGCGATGAACATCGACGGATGCAATGGCTTGGCCTGCTTGACCAAGATTCCCTCCGGTGCTTCGTCTTCCATTACGCCGCTGCCGCATATGTATGTGATCAAGGATCTGGTGGTGGACATGACCAACTTTTACAGCCAGTATAAGAGCATTGAGCCGTGGTTGAAGAGGAAGAGCGAGGCGCCGGTGCCGGGGAAGGAGATTTTGCAGAGTAAGAAAGATAGGGCGAAGTTGGATGGGATGTATGAGTGTATACTGTGTGCTTGTTGCAGTACGTCCTGCCCTAGCTATTGGTGGAACCCGGAGTCTTATCTTGGACCAGCTGCTTTGCTCCATGCCAATAGGTGGATAAGCGATAGCCGTGATGAATACACGAAGGAGCGTCTTGAGGCAATAGATGATGAATTCAAGCTCTATCGCTGTCATACTATACTGAACTGCGCCCGTGCCTGTCCAAAGGGCTTGAACCCTGGAAAACAGATCCAACATATCAAAAAGCTTCAGCTTGTGGGTTGA

Protein sequence

MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG

Homology

[Close]

BLAST of Sed0001228 vs. NCBI nr
Match: KAG6588927.1 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.9 bits (1369), Expect = 3.2e-147
Identity = 256/280 (91.43%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSATPPSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELKEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS ASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. NCBI nr
Match: XP_022928182.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 531.6 bits (1368), Expect = 4.2e-147
Identity = 256/280 (91.43%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSATPPSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP LEEY+IDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS  SS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. NCBI nr
Match: XP_022983213.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 531.2 bits (1367), Expect = 5.5e-147
Identity = 252/280 (90.00%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MA+GIL+RAI RVSATPPSRF+R+R+HA+ AEAQ+ E KAA S+ LKTFAIYRWNPD   
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPSGASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE PVPGKEILQS
Sbjct: 121 ACLTKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0001228 vs. NCBI nr
Match: XP_023530873.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 7.2e-147
Identity = 255/280 (91.07%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSATPPSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS ASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. NCBI nr
Match: XP_022989559.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 530.4 bits (1365), Expect = 9.3e-147
Identity = 255/280 (91.07%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSAT PSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS ASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQHIK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-126
Identity = 219/283 (77.39%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 1   MATGILKRAICRVSA--TPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDN 60
           MA G++ R +   S+  +  +R +  R  ++ +EAQ         ++LKTF IYRWNPDN
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCN 120
              P KP L++Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCN
Sbjct: 61  ---PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCN 120

Query: 121 GLACLTKIPSGA-SSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEI 180
           GLACLTKI SG+  ++ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRK+ A VPGKEI
Sbjct: 121 GLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEI 180

Query: 181 LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER 240
           LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER
Sbjct: 181 LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER 240

Query: 241 LEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           LEAIDDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 LEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 448.0 bits (1151), Expect = 8.0e-125
Identity = 222/285 (77.89%), Postives = 241/285 (84.56%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPS------RFLRVRSHASEAEAQ-KAEPKAAVSSTLKTFAIYR 60
           MA+G++ R +     T PS      R +  R  ++ AEA+ KA       S LKTF IYR
Sbjct: 1   MASGLIGRLV----GTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDNPSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMN 120
           WNPDN   P KP L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMN
Sbjct: 61  WNPDN---PGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMN 120

Query: 121 IDGCNGLACLTKIPSGAS-SSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPV 180
           IDGCNGLACLTKI   AS ++ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRK+ A V
Sbjct: 121 IDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASV 180

Query: 181 PGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240
           P KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE
Sbjct: 181 PAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240

Query: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQ 278
           YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.9e-112
Identity = 198/281 (70.46%), Postives = 230/281 (81.85%), Query Frame = 0


Query: 2   ATGILKR---AICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDN 61
           A  +L+R   A   +S    SR +  + H+S + A    P  A ++T KTF+IYRW+PD+
Sbjct: 3   AAALLRRSPAARALLSPALSSRLVASKPHSS-SPAPPPPPSKAGANT-KTFSIYRWDPDS 62

Query: 62  PSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCN 121
           PS  +KP L++Y++DL +CGPMVLD L+KIKNE DP+LTFRRSCREGICGSCAMNIDG N
Sbjct: 63  PS--TKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRSCREGICGSCAMNIDGDN 122

Query: 122 GLACLTKIPSGAS-SSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEI 181
           GLACLTKI S +S S+I+PLPHM+VIKDLVVDMTNFY+QYKS+EPWLKRK   P PGKEI
Sbjct: 123 GLACLTKISSASSASTISPLPHMFVIKDLVVDMTNFYNQYKSVEPWLKRKDAPPQPGKEI 182

Query: 182 LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER 241
            Q+K DRAKLDGMYECILCACCSTSCPSYWWNPE YLGPAALLHANRWI DSRD++TKER
Sbjct: 183 PQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRWIQDSRDQFTKER 242

Query: 242 LEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQL 279
           L++I+DEFKLYRCHTI NC  ACPKGLNP K I  IKKLQL
Sbjct: 243 LDSINDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot
Match: P21914 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster OX=7227 GN=SdhB PE=2 SV=2)

HSP 1 Score: 355.5 bits (911), Expect = 5.4e-97
Identity = 170/274 (62.04%), Postives = 206/274 (75.18%), Query Frame = 0


Query: 7   KRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPSSPSKPV 66
           ++ + RV +      +R  S+ +    Q+A+PK A    +K F IYRWNPDN  +  KP 
Sbjct: 7   RQILSRVGSLVARNQMRAISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDN--AGEKPY 66

Query: 67  LEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI 126
           ++ YE+DL+ECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G N LAC++KI
Sbjct: 67  MQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKI 126

Query: 127 PSGASSS--ITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEA-PVPGK-EILQSKK 186
               S S  + PLPHMYV++DLV DM NFY QY++I+PWL+RK+EA    GK + LQS +
Sbjct: 127 DINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVE 186

Query: 187 DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAID 246
           DR+KLDG+YECILCACCSTSCPSYWWN E YLGPA L+ A RWI DSRDE + ERL  + 
Sbjct: 187 DRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLK 246

Query: 247 DEFKLYRCHTILNCARACPKGLNPGKQIQHIKKL 277
           D F +YRCHTI+NC R CPKGLNPG+ I  IKKL
Sbjct: 247 DPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKL 278

[Close]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot
Match: B0BM36 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis OX=8364 GN=sdhb PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.0e-95
Identity = 162/246 (65.85%), Postives = 192/246 (78.05%), Query Frame = 0


Query: 33  AQKAEPKAAVSSTLKTFAIYRWNPDNPSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEI 92
           A  A P +   + +K FAIYRW+PD P    KP ++ YE+DL ECG MVLDALIKIKNE+
Sbjct: 30  AAAAAPASQAEARIKKFAIYRWDPDKPG--DKPRMQTYEVDLNECGSMVLDALIKIKNEM 89

Query: 93  DPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGAS--SSITPLPHMYVIKDLVVDM 152
           DPTLTFRRSCREGICGSCAMNI+G N LAC  +I +  S  S I PLPHMYV+KDLV D+
Sbjct: 90  DPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDL 149

Query: 153 TNFYSQYKSIEPWLKRKSEAPVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNP 212
           +NFY+QYKSIEP+LK+K E+    ++ LQS +DR KLDG+YECILCACCSTSCPSYWWN 
Sbjct: 150 SNFYAQYKSIEPYLKKKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNA 209

Query: 213 ESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI 272
           + YLGPA L+ A RW+ DSRD+YT+ERL  + D F LYRCHTI+NC R CPKGLNPGK I
Sbjct: 210 DKYLGPAVLMQAYRWMIDSRDDYTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAI 269

Query: 273 QHIKKL 277
             IKK+
Sbjct: 270 AEIKKM 273

[Close]

BLAST of Sed0001228 vs. ExPASy TrEMBL
Match: A0A6J1EJ68 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435079 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 256/280 (91.43%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSATPPSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP LEEY+IDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS  SS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. ExPASy TrEMBL
Match: A0A6J1J748 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111481863 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.7e-147
Identity = 252/280 (90.00%), Postives = 269/280 (96.07%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MA+GIL+RAI RVSATPPSRF+R+R+HA+ AEAQ+ E KAA S+ LKTFAIYRWNPD   
Sbjct: 1   MASGILRRAIARVSATPPSRFVRIRAHAAAAEAQQVEQKAAASTNLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPSGASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE PVPGKEILQS
Sbjct: 121 ACLTKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0001228 vs. ExPASy TrEMBL
Match: A0A6J1JPN7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486619 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.5e-147
Identity = 255/280 (91.07%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+RAI RVSAT PSRFLR+R+HASEA AQK E KAAVSSTLKTFAIYRWNPD   
Sbjct: 1   MATGILRRAISRVSATSPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLK+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELKEYKIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPS ASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE  VPGKEILQS
Sbjct: 121 ACLTKIPSDASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           K+DRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEA
Sbjct: 181 KQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQHIK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKRLQLVG 277

[Close]

BLAST of Sed0001228 vs. ExPASy TrEMBL
Match: A0A6J1F9C7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111441997 PE=3 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 1.0e-146
Identity = 252/280 (90.00%), Postives = 268/280 (95.71%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MA+GIL+RAI RVSAT PSRF+R+R+HAS AEAQ+ E KAA S+ LKTFAIYRWNPD   
Sbjct: 1   MASGILRRAIARVSATSPSRFVRIRAHASAAEAQQVEQKAAASTNLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLKECGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPSGASS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE PVPGKEILQS
Sbjct: 121 ACLTKIPSGASSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQ+IK+LQLVG
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQNIKQLQLVG 277

[Close]

BLAST of Sed0001228 vs. ExPASy TrEMBL
Match: E5GCD7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.5e-146
Identity = 250/280 (89.29%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPS 60
           MATGIL+R + RVSA+ PSRF+R+R+HASEAEAQ+ E KA  SS LKTFAIYRWNPD   
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPD--- 60

Query: 61  SPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGL 120
           SPSKP L+EY+IDLKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61  SPSKPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGL 120

Query: 121 ACLTKIPSGASSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQS 180
           ACLTKIPSG SS+ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRKSE PVPGKEILQS
Sbjct: 121 ACLTKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPVPGKEILQS 180

Query: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240
           KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEA 240

Query: 241 IDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           I+DEFKLYRCHTILNCARACPKGLNPGKQIQHIK LQL+G
Sbjct: 241 INDEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQLLG 277

[Close]

BLAST of Sed0001228 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 453.8 bits (1166), Expect = 1.0e-127
Identity = 219/283 (77.39%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 1   MATGILKRAICRVSA--TPPSRFLRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDN 60
           MA G++ R +   S+  +  +R +  R  ++ +EAQ         ++LKTF IYRWNPDN
Sbjct: 1   MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60

Query: 61  PSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCN 120
              P KP L++Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCN
Sbjct: 61  ---PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCN 120

Query: 121 GLACLTKIPSGA-SSSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEI 180
           GLACLTKI SG+  ++ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRK+ A VPGKEI
Sbjct: 121 GLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEI 180

Query: 181 LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER 240
           LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER
Sbjct: 181 LQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKER 240

Query: 241 LEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQLVG 281
           LEAIDDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ  G
Sbjct: 241 LEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQKSG 280

[Close]

BLAST of Sed0001228 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-126
Identity = 222/285 (77.89%), Postives = 241/285 (84.56%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPS------RFLRVRSHASEAEAQ-KAEPKAAVSSTLKTFAIYR 60
           MA+G++ R +     T PS      R +  R  ++ AEA+ KA       S LKTF IYR
Sbjct: 1   MASGLIGRLV----GTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDNPSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMN 120
           WNPDN   P KP L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMN
Sbjct: 61  WNPDN---PGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMN 120

Query: 121 IDGCNGLACLTKIPSGAS-SSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPV 180
           IDGCNGLACLTKI   AS ++ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRK+ A V
Sbjct: 121 IDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASV 180

Query: 181 PGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240
           P KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE
Sbjct: 181 PAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240

Query: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQ 278
           YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0001228 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-126
Identity = 222/285 (77.89%), Postives = 241/285 (84.56%), Query Frame = 0


Query: 1   MATGILKRAICRVSATPPS------RFLRVRSHASEAEAQ-KAEPKAAVSSTLKTFAIYR 60
           MA+G++ R +     T PS      R +  R  ++ AEA+ KA       S LKTF IYR
Sbjct: 1   MASGLIGRLV----GTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYR 60

Query: 61  WNPDNPSSPSKPVLEEYEIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMN 120
           WNPDN   P KP L+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMN
Sbjct: 61  WNPDN---PGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMN 120

Query: 121 IDGCNGLACLTKIPSGAS-SSITPLPHMYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPV 180
           IDGCNGLACLTKI   AS ++ITPLPHM+VIKDLVVDMTNFY+QYKSIEPWLKRK+ A V
Sbjct: 121 IDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASV 180

Query: 181 PGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240
           P KEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE
Sbjct: 181 PAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDE 240

Query: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQIQHIKKLQ 278
           YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQI HIK+LQ
Sbjct: 241 YTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 278

[Close]

BLAST of Sed0001228 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 320.1 bits (819), Expect = 1.8e-87
Identity = 160/261 (61.30%), Postives = 186/261 (71.26%), Query Frame = 0


Query: 22  LRVRSHASEAEAQKAEPKAAVSSTLKTFAIYRWNPDNPSSPSKPVLEEYEIDLKECGPMV 81
           L+ +    E E Q  E K       K F IYRWNPD P+  SKP L+ + +DL  CGPMV
Sbjct: 49  LKSQDITKEKEGQHKEVK-------KEFKIYRWNPDKPN--SKPFLQSFFVDLSSCGPMV 108

Query: 82  LDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGAS--SSITPLPH 141
           LD L KIK E D +L++RRSCREGICGSC+MNIDG N +ACL  I    S  + ITPLPH
Sbjct: 109 LDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPH 168

Query: 142 MYVIKDLVVDMTNFYSQYKSIEPWLKRKSEAPVPGKEILQSKKDRAKLDGMYECILCACC 201
           MYVIKDLVVD+TNFY QYKS+EPWLK + + P  G+E  QS KDR KLDG+YECILCACC
Sbjct: 169 MYVIKDLVVDLTNFYQQYKSMEPWLKTR-KPPKDGREHRQSPKDRKKLDGLYECILCACC 228

Query: 202 STSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCAR 261
           +TSCPSYWWNPE + GPAALL A RWISDSRDEY +ERL+AI + E K+YRC  I NC  
Sbjct: 229 TTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTA 288

Query: 262 ACPKGLNPGKQIQHIKKLQLV 280
            CPKGLNP   I  +K   L+
Sbjct: 289 TCPKGLNPASAILKMKSKHLL 299

The following BLAST results are available for this feature:

BLAST of Sed0001228 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588927.1	3.2e-147	91.43	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, parti...	[more]
XP_022928182.1	4.2e-147	91.43	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
XP_022983213.1	5.5e-147	90.00	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucur...	[more]
XP_023530873.1	7.2e-147	91.07	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]
XP_022989559.1	9.3e-147	91.07	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [...	[more]

BLAST of Sed0001228 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB02	1.5e-126	77.39	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	8.0e-125	77.89	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]
Q9S827	5.9e-112	70.46	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
P21914	5.4e-97	62.04	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Droso...	[more]
B0BM36	3.0e-95	65.85	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenop...	[more]

BLAST of Sed0001228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ68	2.0e-147	91.43	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1J748	2.7e-147	90.00	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1JPN7	4.5e-147	91.07	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
A0A6J1F9C7	1.0e-146	90.00	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucur...	[more]
E5GCD7	8.5e-146	89.29	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Cucum...	[more]

BLAST of Sed0001228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40650.1	1.0e-127	77.39	succinate dehydrogenase 2-2	[more]
AT3G27380.1	5.7e-126	77.89	succinate dehydrogenase 2-1	[more]
AT3G27380.2	5.7e-126	77.89	succinate dehydrogenase 2-1	[more]
AT5G65165.1	1.8e-87	61.30	succinate dehydrogenase 2-3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 51..274 e-value: 2.6E-81 score: 270.3
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 48..154 e-value: 1.8E-31 score: 108.4
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 192..265 e-value: 2.7E-9 score: 37.5
None	No IPR available	PANTHER	PTHR11921:SF44	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIAL	coord: 16..277
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 16..277
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 150..276
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 150..279 e-value: 5.4E-52 score: 177.0
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 37..149 e-value: 7.2E-39 score: 134.1
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 102..110
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 193..204
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 183..213 score: 7.894782
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 63..140 score: 9.513311
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 68..115 e-value: 0.00506987 score: 33.5224
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 45..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001228.1	Sed0001228.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity