Sed0001190 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATCTAGAAATTCGAGGTGCACAAAAGCTAACTTAGACAGTAAAAGATATCAATAAAAAAAAAATCAAATATAATGGAAAGAAAGGAAAATGAAGTAAAAATTAAAATATATCCATATATAAATTTAAAATAATGACGTGTCTGTGTTCATATCTAATGTCCGTGCTCGTTAGGTATCCAACCATTATGGCGGCCACATTCCGGCGGCTGAATATTTCATCACAAATATTGCATATAAAGATAGAACTAGAACATATAGACCAAATGCAAACAAAAAGGTGAAGAACAAAACTCTGAGAGAGACCGAGAACTTACAATCGGAACCGAAGTAGAAAACGGCAAGTCATTTTTTACTCATCGGAAGCCGTACGAGAAATTAACCTCTCCGATAAGTGAATTCGAGCGCCAATTGATGTTCATTCAAAAGGAGAGCCGTAAATCCGGCAATTCCATTCGGACAACGGCAACAAACAAAACCAGTAGACGGCGGCGGCGGCCAACGGCTTGATAAGAGAAAGGAAATTGAGCCGTTGCGGCGTTTCCACAACCATCACAGAGCCTTGTAACGGCGGCGGAGGAGAAACGAAATAGCCTCGTCGGAACCCTACGTCAATGAATCGATGGGCCAAATCACTTAATTGGGCCTTCGAGGCCCATTGGAGAAGCTGCGATGATGACAAATTCGTATCAGGATCCGACGGTTGTAATTTGAAGCGCCAGATGCTTTTTGATTCCTTGGACGATCACGATTCTCTTCCGCGGAGATCCAAAAAGGTCCAATAATATTCTCTTTTTCTTTCCTTTTGTCTTTTTCTTATCAAGATTGTTTTTCTTTTTTTTAAATAATTGTTTTTTTAAATTTGAAATGATCACTTTCGCTTTTTATCTTATCATAAAAGTGAAAATCAGTTGAACAAAAAAAAATTGTCGGGAAAAAAATAATATATTTTTATTTATATTTAGAAAGAATATAAATTTTGATGTTGACTACACTAAGAAATTGTGTGAGGGCAAATCTAAAAAATTCAAAATTTTGGTGTGCATATAAGTTCATGGATGTATATGTTTTTTTTTTTTTAATTTTATATAGAAATATTAGATGGAAAAAAAATATATATCAAACAATTTCTCAAAATTTGCAATCAACAAGGAAAGTTGGACCCAAATAAATACCATACTAACCCTCTTTCTAACTTACAAGGCTTCCTAATACATAGATTAAAAACTCATATTTCTCAAAAAAAAATAAAATAAATAAAAACTCGTAGATAAATATTATAATATATAAAAAAAAAACAAGAATGATACTTTTATCATAAATCGATAGATAATTCATAATGTAGTTGAGCTATATTTCATTTTTTACTTAAAATCAACTTAAGCTAGACTCCCTCCAAGAAAAAAAAAATTAACTAGACTCTCTTTAATAGTCGACACTACAAAAACACAAAATTTTTACTTTTTGTATTTCTTTATTTACTTTAACATTTTCTCTCTCTATCAATCAAAATAATTTTTTTTTTTCAAGTAAAAATATATAATTCTAAGATGAATTTATCAAGTATTACTAATAAAACAAATAATATGCTAATTTTGAATATTACAAACAAGTTCTAAAAATATCTGTCGTATTAATAATGCGTTGGAAATGTAATAATTACAAGCAACTCCAAAAATAAATTAGGGAATAAACAAAAAAAAAGATGGAGATTTATATAAATAATAAAACAACCAGCCAAACCAGTCTGACGAATGTCTACGAACTGGACGGGAAAATGACGTGGTCCTGGTAAACAAACAGGGTCCCATACAGCAGAGTTAACGGAAACCGACATGGATTTGTCACGGACTACTCCAGTTTATTTCTATCATTGTTTATTGGTATAAATTTTAAAGACGGAATAGATGGGTGGCGTGGTTGATCATCTGGTTTGATCTTAATCAATTTTTATTCTACGGTCACAGTTCAATATTTATAATCGGTATTTGTAATTTCTCTTTTCCTTTTCCAACTTTGATATAAAAAAAAAGGATGGTATAAAGTTTAAAGTCTTAAACTACATCTTTTTTATATAAAAAAAATGGTCCAAAACTACATATCAAAATAAAACAAAATTCAAACTTTAGAGTCAAGAAAATATTTTGACTTTTTTTTTACTATACAAAATAGTTTTCTGTAGCAGGTTTTCAATATCCTATGAAAAGCGTTAATTTCATATTAGTAGGTTAAATGTTTAGAATTATGATTTTGTTGACAATATATGTAAATAATTATGTTACAAATCAAAAATATTTTTTGAAATGAATAATAAGTTCAAATTAACTAAAATTTAATCTGAATTAATTTAAAATAAACTCATTATTTGTTTGTTTTTTTTTTGTGAGTTTTACCATTATTTAATCTAATCGTTAAATTTGTAACTCATAAAATTTAATTGTCTTGATAGGATTGTCACGTTTTTAGACACCCATAATCAATTTCTACGGTTATGCAGGTTATATTGTTGTGATGGGTAAGATAATCAAACCCGCAACCGATGGCTTTTTCGAAAAAGGAAACGGGAAACGTGGTTCATTATTTGTCACTTCGAGGCTTTTTGGCGATTTTCTATTTTAAAAAAGTATCCATTTTTAATTTCTATCTCTCTATTTTTTTTTCATTAAAAAAAGAAGAAGGTAAAAATCTAATTTGCACGGGGATATAGATTCATGACCGTCGAGTGAAATCGCCTGAAGTTTTTCTGTGGCTTAATTTTTCCGGGAAAGAAAAAAAAAAGAATTAATTTTCTTTCTTCTCCTTCGTTGCTGATTTCCGGTAAAGGATAGCCACCGAAACTTCCTTTAATTGGTCAAAAAATAATCAATTTCTTCAACAATTTATTCCGTGCAAGCAAAACCCAAATCGAAAACTCGTTTAAGAACCCAAAAGGGAAGGGAAAAAAAAAAGGAGAAATTTGCAAAAATGGATTTCTGGCCGGAATTTCTCGCTAAAAGTTGGGGAAAAGAGTTCGTCGCCGGCGGAATCGGCGGCGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATTCGACAACAAAGCTCCACCGCCGGCTCCGCCCTCACCGTCCTACGTGGCATCATGTCCAACGGCGGCCCCGCCGCCCTCTACCGGGGAATGGCCGCCCCACTCGCCTCCGTAACATTTCAGGTCAAAATCCGTTCATCTATTTCAAAATCCCCAATCAAAATTCCAAAACATGCCCAACATTCAAACACTCCCATTAAACAAAACCCATATCTTAATTTTTCCTGATTCGTTACTTTTCTTTGATTTATTTTTTAAATTTTGCAGAACGCCATTGTTTTTCAAACCAACGCCGTTCTCTGCAGAGCATTCGACCCGGCGGCGAGCGAAACCCGACCGCCATCGTACAAGGCGGTGGCATTAGGCGGGTTCGGTACCGGAGCACTACAGAGCCTAATTCTAACCCCTGTCGAACTCGTCAAAATCCGTCTCCAACTCCAAGAATCACCCAAATCCCCAAATTCAAACCCGGGTTCGAATCGGGTCGGGCCGATGCGGGTCGCGAAGAACATTTACAAATCAGAAGGATACAGAGGATTATACAGAGGATTAACAATCACAATGCTCAGAGACGCTCCATCACACTGTTTTTACTTTTTAACCTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGTAGAAACTCCGGCCAAGAATCGTTGAAAACGATGCTCGTCGCCGGCGGCCTCGCCGGCGTTGCTAGCTGGGTTTGCTGCTACCCGTTGGATGTTGTGAAAACCCGGCTTCAAGCTCAGTCCAAAATCTCGTTTCAAAAGTATAATGGGATTATGGATTGTTTTCAAAAATCCGTTAAGGAAGAAGGGTATAGCGTTTTGTGGCGTGGATTGGGAACCGCCGTTGCGAGAGCTTTTCTTGTTAATGGCGCCATTTTTACTGCTTATGAACTCAGCTTGAGATGTCTGTTCAATAATGGCGGATTTCATACTGAAAATATAATTTGAGATATGAAATTGGACGAAATGAGAAGGGGGATTTTTTTTTCCGGCCATTTTTGTAGCTTCCATGGATTGGAGTTGCAGAAGAAATTTGATGATGATGATGAAAAAATTATGGGGTTTTTTTTTTATGGGTATTATTTTTTTGTACAGGATTTTGCTGTTCCTGTTTGCAGTGCAAAGGGAGAACTAGATCTAGAAATTTCTGTTTCTGTTTTTTTTTTTTTTTAATTTCTTTTTTGTTGAATAATATGGAATTTGTGTAATAAGAC GTATCTAGAAATTCGAGGTGCACAAAAGCTAACTTAGACAGTAAAAGATATCAATAAAAAAAAAATCAAATATAATGGAAAGAAAGGAAAATGAAGTAAAAATTAAAATATATCCATATATAAATTTAAAATAATGACGTGTCTGTGTTCATATCTAATGTCCGTGCTCGTTAGGTATCCAACCATTATGGCGGCCACATTCCGGCGGCTGAATATTTCATCACAAATATTGCATATAAAGATAGAACTAGAACATATAGACCAAATGCAAACAAAAAGGTGAAGAACAAAACTCTGAGAGAGACCGAGAACTTACAATCGGAACCGAAGTAGAAAACGGCAAGTCATTTTTTACTCATCGGAAGCCGTACGAGAAATTAACCTCTCCGATAAGTGAATTCGAGCGCCAATTGATGTTCATTCAAAAGGAGAGCCGTAAATCCGGCAATTCCATTCGGACAACGGCAACAAACAAAACCAGTAGACGGCGGCGGCGGCCAACGGCTTGATAAGAGAAAGGAAATTGAGCCGTTGCGGCGTTTCCACAACCATCACAGAGCCTTGTAACGGCGGCGGAGGAGAAACGAAATAGCCTCGTCGGAACCCTACGTCAATGAATCGATGGGCCAAATCACTTAATTGGGCCTTCGAGGCCCATTGGAGAAGCTGCGATGATGACAAATTCGTATCAGGATCCGACGGTTGTAATTTGAAGCGCCAGATGCTTTTTGATTCCTTGGACGATCACGATTCTCTTCCGCGGAGATCCAAAAAGGTTATATTGTTGTGATGGGTAAGATAATCAAACCCGCAACCGATGGCTTTTTCGAAAAAGGAAACGGGAAACGTGGTTCATTATTTGTCACTTCGAGGCTTTTTGGCGATTTTCTATTTTAAAAAAGTATCCATTTTTAATTTCTATCTCTCTATTTTTTTTTCATTAAAAAAAGAAGAAGGTAAAAATCTAATTTGCACGGGGATATAGATTCATGACCGTCGAGTGAAATCGCCTGAAGTTTTTCTGTGGCTTAATTTTTCCGGGAAAGAAAAAAAAAAGAATTAATTTTCTTTCTTCTCCTTCGTTGCTGATTTCCGGTAAAGGATAGCCACCGAAACTTCCTTTAATTGGTCAAAAAATAATCAATTTCTTCAACAATTTATTCCGTGCAAGCAAAACCCAAATCGAAAACTCGTTTAAGAACCCAAAAGGGAAGGGAAAAAAAAAAGGAGAAATTTGCAAAAATGGATTTCTGGCCGGAATTTCTCGCTAAAAGTTGGGGAAAAGAGTTCGTCGCCGGCGGAATCGGCGGCGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATTCGACAACAAAGCTCCACCGCCGGCTCCGCCCTCACCGTCCTACGTGGCATCATGTCCAACGGCGGCCCCGCCGCCCTCTACCGGGGAATGGCCGCCCCACTCGCCTCCGTAACATTTCAGAACGCCATTGTTTTTCAAACCAACGCCGTTCTCTGCAGAGCATTCGACCCGGCGGCGAGCGAAACCCGACCGCCATCGTACAAGGCGGTGGCATTAGGCGGGTTCGGTACCGGAGCACTACAGAGCCTAATTCTAACCCCTGTCGAACTCGTCAAAATCCGTCTCCAACTCCAAGAATCACCCAAATCCCCAAATTCAAACCCGGGTTCGAATCGGGTCGGGCCGATGCGGGTCGCGAAGAACATTTACAAATCAGAAGGATACAGAGGATTATACAGAGGATTAACAATCACAATGCTCAGAGACGCTCCATCACACTGTTTTTACTTTTTAACCTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGTAGAAACTCCGGCCAAGAATCGTTGAAAACGATGCTCGTCGCCGGCGGCCTCGCCGGCGTTGCTAGCTGGGTTTGCTGCTACCCGTTGGATGTTGTGAAAACCCGGCTTCAAGCTCAGTCCAAAATCTCGTTTCAAAAGTATAATGGGATTATGGATTGTTTTCAAAAATCCGTTAAGGAAGAAGGGTATAGCGTTTTGTGGCGTGGATTGGGAACCGCCGTTGCGAGAGCTTTTCTTGTTAATGGCGCCATTTTTACTGCTTATGAACTCAGCTTGAGATGTCTGTTCAATAATGGCGGATTTCATACTGAAAATATAATTTGAGATATGAAATTGGACGAAATGAGAAGGGGGATTTTTTTTTCCGGCCATTTTTGTAGCTTCCATGGATTGGAGTTGCAGAAGAAATTTGATGATGATGATGAAAAAATTATGGGGTTTTTTTTTTATGGGTATTATTTTTTTGTACAGGATTTTGCTGTTCCTGTTTGCAGTGCAAAGGGAGAACTAGATCTAGAAATTTCTGTTTCTGTTTTTTTTTTTTTTTAATTTCTTTTTTGTTGAATAATATGGAATTTGTGTAATAAGAC ATGGATTTCTGGCCGGAATTTCTCGCTAAAAGTTGGGGAAAAGAGTTCGTCGCCGGCGGAATCGGCGGCGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATTCGACAACAAAGCTCCACCGCCGGCTCCGCCCTCACCGTCCTACGTGGCATCATGTCCAACGGCGGCCCCGCCGCCCTCTACCGGGGAATGGCCGCCCCACTCGCCTCCGTAACATTTCAGAACGCCATTGTTTTTCAAACCAACGCCGTTCTCTGCAGAGCATTCGACCCGGCGGCGAGCGAAACCCGACCGCCATCGTACAAGGCGGTGGCATTAGGCGGGTTCGGTACCGGAGCACTACAGAGCCTAATTCTAACCCCTGTCGAACTCGTCAAAATCCGTCTCCAACTCCAAGAATCACCCAAATCCCCAAATTCAAACCCGGGTTCGAATCGGGTCGGGCCGATGCGGGTCGCGAAGAACATTTACAAATCAGAAGGATACAGAGGATTATACAGAGGATTAACAATCACAATGCTCAGAGACGCTCCATCACACTGTTTTTACTTTTTAACCTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGTAGAAACTCCGGCCAAGAATCGTTGAAAACGATGCTCGTCGCCGGCGGCCTCGCCGGCGTTGCTAGCTGGGTTTGCTGCTACCCGTTGGATGTTGTGAAAACCCGGCTTCAAGCTCAGTCCAAAATCTCGTTTCAAAAGTATAATGGGATTATGGATTGTTTTCAAAAATCCGTTAAGGAAGAAGGGTATAGCGTTTTGTGGCGTGGATTGGGAACCGCCGTTGCGAGAGCTTTTCTTGTTAATGGCGCCATTTTTACTGCTTATGAACTCAGCTTGAGATGTCTGTTCAATAATGGCGGATTTCATACTGAAAATATAATTTGA MDFWPEFLAKSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQSSTAGSALTVLRGIMSNGGPAALYRGMAAPLASVTFQNAIVFQTNAVLCRAFDPAASETRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQESPKSPNSNPGSNRVGPMRVAKNIYKSEGYRGLYRGLTITMLRDAPSHCFYFLTYEFMREKLHPGCRNSGQESLKTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKISFQKYNGIMDCFQKSVKEEGYSVLWRGLGTAVARAFLVNGAIFTAYELSLRCLFNNGGFHTENII Homology
BLAST of Sed0001190 vs. NCBI nr
Match: XP_023526444.1 (mitochondrial arginine transporter BAC2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154 Identity = 268/309 (86.73%), Postives = 292/309 (94.50%), Query Frame = 0
BLAST of Sed0001190 vs. NCBI nr
Match: KAG6581896.1 (Mitochondrial arginine transporter BAC2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018330.1 Mitochondrial arginine transporter BAC2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 555.1 bits (1429), Expect = 3.9e-154 Identity = 268/309 (86.73%), Postives = 292/309 (94.50%), Query Frame = 0
BLAST of Sed0001190 vs. NCBI nr
Match: XP_022979287.1 (mitochondrial arginine transporter BAC2-like [Cucurbita maxima]) HSP 1 Score: 554.3 bits (1427), Expect = 6.7e-154 Identity = 268/309 (86.73%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. NCBI nr
Match: XP_022998748.1 (mitochondrial arginine transporter BAC2-like [Cucurbita maxima]) HSP 1 Score: 552.4 bits (1422), Expect = 2.5e-153 Identity = 264/309 (85.44%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. NCBI nr
Match: XP_022955406.1 (mitochondrial arginine transporter BAC2-like [Cucurbita moschata]) HSP 1 Score: 552.0 bits (1421), Expect = 3.3e-153 Identity = 267/309 (86.41%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy Swiss-Prot
Match: Q9CA93 (Mitochondrial arginine transporter BAC2 OS=Arabidopsis thaliana OX=3702 GN=BAC2 PE=1 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.1e-114 Identity = 204/300 (68.00%), Postives = 246/300 (82.00%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy Swiss-Prot
Match: Q08DK7 (Mitochondrial basic amino acids transporter OS=Bos taurus OX=9913 GN=SLC25A29 PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 4.3e-47 Identity = 110/285 (38.60%), Postives = 156/285 (54.74%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy Swiss-Prot
Match: Q8N413 (Solute carrier family 25 member 45 OS=Homo sapiens OX=9606 GN=SLC25A45 PE=2 SV=2) HSP 1 Score: 189.5 bits (480), Expect = 5.7e-47 Identity = 106/286 (37.06%), Postives = 161/286 (56.29%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy Swiss-Prot
Match: Q8CFJ7 (Solute carrier family 25 member 45 OS=Mus musculus OX=10090 GN=Slc25a45 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.4e-45 Identity = 106/286 (37.06%), Postives = 160/286 (55.94%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy Swiss-Prot
Match: Q55E85 (Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum OX=44689 GN=mcfD PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44 Identity = 105/326 (32.21%), Postives = 165/326 (50.61%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy TrEMBL
Match: A0A6J1INC9 (mitochondrial arginine transporter BAC2-like OS=Cucurbita maxima OX=3661 GN=LOC111479054 PE=3 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 3.2e-154 Identity = 268/309 (86.73%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy TrEMBL
Match: A0A6J1KHM4 (mitochondrial arginine transporter BAC2-like OS=Cucurbita maxima OX=3661 GN=LOC111493319 PE=3 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153 Identity = 264/309 (85.44%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy TrEMBL
Match: A0A6J1GTP3 (mitochondrial arginine transporter BAC2-like OS=Cucurbita moschata OX=3662 GN=LOC111457440 PE=3 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153 Identity = 267/309 (86.41%), Postives = 291/309 (94.17%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy TrEMBL
Match: A0A6J1GB69 (mitochondrial arginine transporter BAC2-like OS=Cucurbita moschata OX=3662 GN=LOC111452395 PE=3 SV=1) HSP 1 Score: 549.3 bits (1414), Expect = 1.0e-152 Identity = 264/309 (85.44%), Postives = 289/309 (93.53%), Query Frame = 0
BLAST of Sed0001190 vs. ExPASy TrEMBL
Match: A0A5D3CBJ9 (Mitochondrial arginine transporter BAC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001110 PE=3 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152 Identity = 266/309 (86.08%), Postives = 288/309 (93.20%), Query Frame = 0
BLAST of Sed0001190 vs. TAIR 10
Match: AT1G79900.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 412.9 bits (1060), Expect = 2.2e-115 Identity = 204/300 (68.00%), Postives = 246/300 (82.00%), Query Frame = 0
BLAST of Sed0001190 vs. TAIR 10
Match: AT5G46800.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 156.0 bits (393), Expect = 4.9e-38 Identity = 105/302 (34.77%), Postives = 157/302 (51.99%), Query Frame = 0
BLAST of Sed0001190 vs. TAIR 10
Match: AT2G33820.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 120.2 bits (300), Expect = 3.0e-27 Identity = 84/297 (28.28%), Postives = 141/297 (47.47%), Query Frame = 0
BLAST of Sed0001190 vs. TAIR 10
Match: AT4G39460.1 (S-adenosylmethionine carrier 1 ) HSP 1 Score: 110.5 bits (275), Expect = 2.4e-24 Identity = 91/290 (31.38%), Postives = 131/290 (45.17%), Query Frame = 0
BLAST of Sed0001190 vs. TAIR 10
Match: AT4G39460.2 (S-adenosylmethionine carrier 1 ) HSP 1 Score: 110.5 bits (275), Expect = 2.4e-24 Identity = 91/290 (31.38%), Postives = 131/290 (45.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|