Sed0001160 (gene) Chayote v1

Overview


Name	Sed0001160
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DEAD-box ATP-dependent RNA helicase 21
Location	LG08: 38326090 .. 38327956 (+)
RNA-Seq Expression	Sed0001160
Synteny	Sed0001160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATCATGGCGTTGCCAACGACTTGGCCGCTGGTTTTTCATCTTCCAAGTATTTACAGGTCGTCATTGATTTCAAACCAGTCTTCTCAACTAAAGCTCAACGCCAACAATTAGCTTTTCAAAGACGTACATCGTCATTTGATTCTGCTGATAACCACAAACCATATAACGTAGATAGCAGAGACCGAGACCGAGATCGATACCGAGACCGCGAGGAAGAAGAAGCAGAGAGTGCCCGCACAAAGCGACAACGTGACAAAGAGTTTGATGCCAATAAAGAACACTACCTCGGCACCAAGAAACCTAAGAAACGTGTTGTTAAACCTACTGACAAATTCCACTTCTCATTCGATTGGGATAAAGCTGATGATACTTCAAGAGATATGAATTTGCTTTACCAATATCCTCATGAAGCCCAACTCCTGTTTGGACGAGGGTTCCGTGCCAGCATGGATCGACGAGAGCAAAAGAACCTTATGAGGGTTGATCCACATTGGAGTGAGAAGAAATTGGAGGAGATGACTGAGAGGGATTGGAGAATTTTCAAAGAGGATTTCAATATATCCTACAAGGGATTGAAACTCCCTCGCCCAATGAGAAGATGGACCGAGAGTAAGCTGCCGACCGAACTTCGTAAGGCTGTCGATAGGGCCCGTTACAAGACGCCCTCTCCCATTCAAATGGCTGAGCATTCCGCTCGGCTTACAACAACGCGATGTGATTGGCATTGCCGAGACTGGTTCGGGTAAGACGGCTGCATTTGTTCTTCCCATGCTTGCTTACGTTGCGAGGTTGCCTCGCATCAACGAAGAGAATGAGGCGGACGGGCCTTATGCGGTAGTGATGGCTCCCACTCGCGAGCTCGCACAACAAATCGAGGACGAGACGAAGAAGTTCTCTCATTATTTGCATACTAGAGTGGTTTCAATAGTTGGAGGTCAATCAATTGAGGAGCAAGGATTTAAGATCAGGCAGGGTTGTGAGATTATCATTGCCACTCCAGGTCGTTTGCTGGATTGTTTGGAAAGACGTTACGTTGTGCTTAATCAATGTAATTATGTTGTTCTAGACGAGGCTGATAGGATGATAGATATGGGATTCGGGCCTCAAGTTAAGGGTGTTTTAGATGTAATGCCTTCGAGCAATCTTAAACCCGAAAATGAGAATGAAGAACTTGACGAGAAGAAAATATATCGAACTACGTACATGTTCAGCGCTACCATGTCACCTGCTGTGGAGAGGCTCGCGAGAAAGTATTTAAGAAATCCGGTTGTCGTTACCATTGGAACAGAAGGAAAAGCAACTGACTTGATCTCTCAACATGTTATTATGAAGAAAGAAACAGATATATTTTATAGATTGCAGAATTTGCTTGATAACTTGGGTCACAGAACAGCCATTGTTTTTGTTAACACCAAGAAGAATGTTGACTATGTTGCTAAAAGTTTGGACAAGGCAGGGCATTGTGTTGCAACCTTGCATGGTGGGAAGTCACAAGAGCAAAGGGAAATTAGTCTTGAAGGCTTTAGAACCAAGCAGTATAAAGTCCTTGTTGCTACAAATGTTGCTGGTCGTGGAATAGATATTCCTGATGTTGCTCATGTAGTAAACTATGATATGCCCAGTAACATCGAAATGTATACGCATCGAATTGGGCGTACCGGCCGTGCAGGGAAAACTGGAGTGGCTACGACGTTCTTGACTTTACGAGACTCGGACGTCTTTTACGACCTCAAGCAAAAGCTTATCGAAAGCAATAGTCCTGTGCCTCCTGAATTGGCTAGGCACGAGGCGTCTAAGTTCAAGCCTGGGTGTATTCCTAGTAGACCTCCTCGGCATAATGAAACTCTTTTTGTACATTGA

mRNA sequence

ATGGAAAATCATGGCGTTGCCAACGACTTGGCCGCTGGTTTTTCATCTTCCAAGTATTTACAGGTCGTCATTGATTTCAAACCAGTCTTCTCAACTAAAGCTCAACGCCAACAATTAGCTTTTCAAAGACGTACATCGTCATTTGATTCTGCTGATAACCACAAACCATATAACGTAGATAGCAGAGACCGAGACCGAGATCGATACCGAGACCGCGAGGAAGAAGAAGCAGAGAGTGCCCGCACAAAGCGACAACGTGACAAAGAGTTTGATGCCAATAAAGAACACTACCTCGGCACCAAGAAACCTAAGAAACGTGTTGTTAAACCTACTGACAAATTCCACTTCTCATTCGATTGGGATAAAGCTGATGATACTTCAAGAGATATGAATTTGCTTTACCAATATCCTCATGAAGCCCAACTCCTGTTTGGACGAGGGTTCCGTGCCAGCATGGATCGACGAGAGCAAAAGAACCTTATGAGGGTTGATCCACATTGGAGTGAGAAGAAATTGGAGGAGATGACTGAGAGGGATTGGAGAATTTTCAAAGAGGATTTCAATATATCCTACAAGGGATTGAAACTCCCTCGCCCAATGAGAAGATGGACCGAGAGGCCCGTTACAAGACGCCCTCTCCCATTCAAATGGCTGAGCATTCCGCTCGGCTTACAACAACGCGATGTGATTGGCATTGCCGAGACTGGTTCGGGTAAGACGGCTGCATTTGTTCTTCCCATGCTTGCTTACGTTGCGAGGTTGCCTCGCATCAACGAAGAGAATGAGGCGGACGGGCCTTATGCGGTAGTGATGGCTCCCACTCGCGAGCTCGCACAACAAATCGAGGACGAGACGAAGAAGTTCTCTCATTATTTGCATACTAGAGTGGTTTCAATAGTTGGAGGTCAATCAATTGAGGAGCAAGGATTTAAGATCAGGCAGGGTTGTGAGATTATCATTGCCACTCCAGGTCGTTTGCTGGATTGTTTGGAAAGACGTTACGTTGTGCTTAATCAATGTAATTATGTTGTTCTAGACGAGGCTGATAGGATGATAGATATGGGATTCGGGCCTCAAGTTAAGGGTGTTTTAGATGTAATGCCTTCGAGCAATCTTAAACCCGAAAATGAGAATGAAGAACTTGACGAGAAGAAAATATATCGAACTACGTACATGTTCAGCGCTACCATGTCACCTGCTGTGGAGAGGCTCGCGAGAAAGTATTTAAGAAATCCGGTTGTCGTTACCATTGGAACAGAAGGAAAAGCAACTGACTTGATCTCTCAACATGTTATTATGAAGAAAGAAACAGATATATTTTATAGATTGCAGAATTTGCTTGATAACTTGGGTCACAGAACAGCCATTGTTTTTGTTAACACCAAGAAGAATGTTGACTATGTTGCTAAAAGTTTGGACAAGGCAGGGCATTGTGTTGCAACCTTGCATGGTGGGAAGTCACAAGAGCAAAGGGAAATTAGTCTTGAAGGCTTTAGAACCAAGCAGTATAAAGTCCTTGTTGCTACAAATGTTGCTGGTCGTGGAATAGATATTCCTGATGTTGCTCATGTAGTAAACTATGATATGCCCAGTAACATCGAAATGTATACGCATCGAATTGGGCGTACCGGCCGTGCAGGGAAAACTGGAGTGGCTACGACGTTCTTGACTTTACGAGACTCGGACGTCTTTTACGACCTCAAGCAAAAGCTTATCGAAAGCAATAGTCCTGTGCCTCCTGAATTGGCTAGGCACGAGGCGTCTAAGTTCAAGCCTGGGTGTATTCCTAGTAGACCTCCTCGGCATAATGAAACTCTTTTTGTACATTGA

Coding sequence (CDS)

ATGGAAAATCATGGCGTTGCCAACGACTTGGCCGCTGGTTTTTCATCTTCCAAGTATTTACAGGTCGTCATTGATTTCAAACCAGTCTTCTCAACTAAAGCTCAACGCCAACAATTAGCTTTTCAAAGACGTACATCGTCATTTGATTCTGCTGATAACCACAAACCATATAACGTAGATAGCAGAGACCGAGACCGAGATCGATACCGAGACCGCGAGGAAGAAGAAGCAGAGAGTGCCCGCACAAAGCGACAACGTGACAAAGAGTTTGATGCCAATAAAGAACACTACCTCGGCACCAAGAAACCTAAGAAACGTGTTGTTAAACCTACTGACAAATTCCACTTCTCATTCGATTGGGATAAAGCTGATGATACTTCAAGAGATATGAATTTGCTTTACCAATATCCTCATGAAGCCCAACTCCTGTTTGGACGAGGGTTCCGTGCCAGCATGGATCGACGAGAGCAAAAGAACCTTATGAGGGTTGATCCACATTGGAGTGAGAAGAAATTGGAGGAGATGACTGAGAGGGATTGGAGAATTTTCAAAGAGGATTTCAATATATCCTACAAGGGATTGAAACTCCCTCGCCCAATGAGAAGATGGACCGAGAGGCCCGTTACAAGACGCCCTCTCCCATTCAAATGGCTGAGCATTCCGCTCGGCTTACAACAACGCGATGTGATTGGCATTGCCGAGACTGGTTCGGGTAAGACGGCTGCATTTGTTCTTCCCATGCTTGCTTACGTTGCGAGGTTGCCTCGCATCAACGAAGAGAATGAGGCGGACGGGCCTTATGCGGTAGTGATGGCTCCCACTCGCGAGCTCGCACAACAAATCGAGGACGAGACGAAGAAGTTCTCTCATTATTTGCATACTAGAGTGGTTTCAATAGTTGGAGGTCAATCAATTGAGGAGCAAGGATTTAAGATCAGGCAGGGTTGTGAGATTATCATTGCCACTCCAGGTCGTTTGCTGGATTGTTTGGAAAGACGTTACGTTGTGCTTAATCAATGTAATTATGTTGTTCTAGACGAGGCTGATAGGATGATAGATATGGGATTCGGGCCTCAAGTTAAGGGTGTTTTAGATGTAATGCCTTCGAGCAATCTTAAACCCGAAAATGAGAATGAAGAACTTGACGAGAAGAAAATATATCGAACTACGTACATGTTCAGCGCTACCATGTCACCTGCTGTGGAGAGGCTCGCGAGAAAGTATTTAAGAAATCCGGTTGTCGTTACCATTGGAACAGAAGGAAAAGCAACTGACTTGATCTCTCAACATGTTATTATGAAGAAAGAAACAGATATATTTTATAGATTGCAGAATTTGCTTGATAACTTGGGTCACAGAACAGCCATTGTTTTTGTTAACACCAAGAAGAATGTTGACTATGTTGCTAAAAGTTTGGACAAGGCAGGGCATTGTGTTGCAACCTTGCATGGTGGGAAGTCACAAGAGCAAAGGGAAATTAGTCTTGAAGGCTTTAGAACCAAGCAGTATAAAGTCCTTGTTGCTACAAATGTTGCTGGTCGTGGAATAGATATTCCTGATGTTGCTCATGTAGTAAACTATGATATGCCCAGTAACATCGAAATGTATACGCATCGAATTGGGCGTACCGGCCGTGCAGGGAAAACTGGAGTGGCTACGACGTTCTTGACTTTACGAGACTCGGACGTCTTTTACGACCTCAAGCAAAAGCTTATCGAAAGCAATAGTCCTGTGCCTCCTGAATTGGCTAGGCACGAGGCGTCTAAGTTCAAGCCTGGGTGTATTCCTAGTAGACCTCCTCGGCATAATGAAACTCTTTTTGTACATTGA

Protein sequence

MENHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSFDSADNHKPYNVDSRDRDRDRYRDREEEEAESARTKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNLMRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVTRRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARHEASKFKPGCIPSRPPRHNETLFVH

Homology

[Close]

BLAST of Sed0001160 vs. NCBI nr
Match: XP_038883557.1 (DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883631.1 DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883699.1 DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883781.1 DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883856.1 DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883933.1 DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida])

HSP 1 Score: 936.4 bits (2419), Expect = 1.2e-268
Identity = 504/712 (70.79%), Postives = 541/712 (75.98%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRR------------------ 62
           N GV N   +G SSSK L  V+D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--LSGSSSSKPLHAVVDNKPVFLTKAQREQLALQRRQDEISLQRRRQDQLLLSN 63

Query: 63  --TSSFDSADNHKPYNVDSRD--------RDRDRYRDRE----------------EEEAE 122
               SFDS DNHK  + D RD        RDRDR RDRE                EEEA+
Sbjct: 64  SQNPSFDSVDNHKSSDYDRRDRDRGRDRERDRDRTRDRERDRDRDLERRNREKEREEEAK 123

Query: 123 SAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRDMN 182
           +          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRDMN
Sbjct: 124 ARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN 183

Query: 183 LLYQYPHEAQLLFGRGFRASMDRREQKNL------------------------------- 242
           LLYQ PHEAQLLFGRGFRA MDRREQK L                               
Sbjct: 184 LLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQKLK 243

Query: 243 -----------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVT 302
                      MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  +T
Sbjct: 244 EKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLT 303

Query: 303 ------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLPRI 362
                       + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP I
Sbjct: 304 TELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPI 363

Query: 363 NEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQGCE 422
           NEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQGCE
Sbjct: 364 NEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGCE 423

Query: 423 IIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPENE 482
           ++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPENE
Sbjct: 424 VVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENE 483

Query: 483 NEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKKET 542
           +EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM KE+
Sbjct: 484 DEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKES 543

Query: 543 DIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISLEG 602
           + FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISLEG
Sbjct: 544 EKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISLEG 603

Query: 603 FRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 610
           FRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT
Sbjct: 604 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 663

[Close]

BLAST of Sed0001160 vs. NCBI nr
Match: XP_004145628.1 (DEAD-box ATP-dependent RNA helicase 21 [Cucumis sativus])

HSP 1 Score: 934.1 bits (2413), Expect = 6.1e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--VSGSSSSKPLHAAVDSKPVFLTKAQREQLALQRRQDEISHQRRRQDQLLLSN 63

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 64  SQKPLSDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 123

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 124 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 183

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 184 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 243

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 244 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 303

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 304 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 363

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 364 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 423

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 424 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 483

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 484 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 543

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 544 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 603

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 604 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 663

[Close]

BLAST of Sed0001160 vs. NCBI nr
Match: KAE8650563.1 (hypothetical protein Csa_010381 [Cucumis sativus])

HSP 1 Score: 934.1 bits (2413), Expect = 6.1e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 93  NPGVEN--VSGSSSSKPLHAAVDSKPVFLTKAQREQLALQRRQDEISHQRRRQDQLLLSN 152

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 153 SQKPLSDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 212

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 213 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 272

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 273 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 332

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 333 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 392

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 393 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 452

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 453 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 512

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 513 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 572

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 573 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 632

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 633 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 692

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 693 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 752

[Close]

BLAST of Sed0001160 vs. NCBI nr
Match: KAA0048485.1 (DEAD-box ATP-dependent RNA helicase 21 [Cucumis melo var. makuwa] >TYK28277.1 DEAD-box ATP-dependent RNA helicase 21 [Cucumis melo var. makuwa])

HSP 1 Score: 933.7 bits (2412), Expect = 8.0e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--VSGSSSSKPLHAAVDNKPVFLTKAQREQLALQRRQDEISLQRRRQDQLLLSN 63

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 64  SQKPLPDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 123

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 124 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 183

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 184 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 243

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 244 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 303

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 304 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 363

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 364 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 423

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 424 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 483

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 484 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 543

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 544 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 603

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 604 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 663

[Close]

BLAST of Sed0001160 vs. NCBI nr
Match: XP_022137940.1 (DEAD-box ATP-dependent RNA helicase 21 [Momordica charantia] >XP_022137941.1 DEAD-box ATP-dependent RNA helicase 21 [Momordica charantia])

HSP 1 Score: 933.7 bits (2412), Expect = 8.0e-268
Identity = 505/712 (70.93%), Postives = 538/712 (75.56%), Query Frame = 0


Query: 6   VANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTS------------------- 65
           V  D  AG SSSK L    D KPVF TKAQR+QLA QRR                     
Sbjct: 5   VGADDLAGSSSSKSLHAATDNKPVFLTKAQREQLALQRRQEEISLQRNRQDQLLSNSQKP 64

Query: 66  SFDSADNHKPYNVD------------SRDRDRDRYRDRE----------------EEEA- 125
           S DS DNHKP + D             RDRDRDR RDRE                EEEA 
Sbjct: 65  SSDSVDNHKPSDFDRRDRDRGREREKDRDRDRDRTRDRERDRDRDLDRRNREKEREEEAK 124

Query: 126 --ESAR----TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRDMN 185
             E AR     +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRDMN
Sbjct: 125 ARERARLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN 184

Query: 186 LLYQYPHEAQLLFGRGFRASMDRREQKNL------------------------------- 245
           LLYQ PHEAQLLFGRGFRA MDRREQK L                               
Sbjct: 185 LLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQKLK 244

Query: 246 -----------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVT 305
                      MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  +T
Sbjct: 245 EKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLT 304

Query: 306 ------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLPRI 365
                       + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP I
Sbjct: 305 TELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPI 364

Query: 366 NEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQGCE 425
           NEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQGCE
Sbjct: 365 NEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGCE 424

Query: 426 IIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPENE 485
           ++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPENE
Sbjct: 425 VVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENE 484

Query: 486 NEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKKET 545
           +EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM KE+
Sbjct: 485 DEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKES 544

Query: 546 DIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISLEG 605
           + FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISLEG
Sbjct: 545 EKFYRLQNLLDNLGDKTAIVFVNTKKNADNVAKNLDKAGYRVTTLHGGKSQEQREISLEG 604

Query: 606 FRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 610
           FRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT
Sbjct: 605 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 664

[Close]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot
Match: P93008 (DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana OX=3702 GN=RH21 PE=2 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 9.2e-243
Identity = 429/615 (69.76%), Postives = 487/615 (79.19%), Query Frame = 0


Query: 60  DSRDRDRD---RYRDREEEEAESARTK--------RQRDKEFDANKEHYLGTKKPKKRVV 119
           D R+RDR+   R R++E EE   AR K        R+++KE DA KE YLG KKPKKRV+
Sbjct: 119 DRRERDREPDRRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVI 178

Query: 120 KPTDKFHFSFDWDKADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNL-------- 179
           +P++KF FSFDW+  +DTSRDMN+LYQ PHEAQLLFGRGFRA MDRREQK          
Sbjct: 179 RPSEKFRFSFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEM 238

Query: 180 ----------------------------------MRVDPHWSEKKLEEMTERDWRIFKED 239
                                             MRVD HWS+K+LEEMTERDWRIF+ED
Sbjct: 239 RDEIRKKDGIVEKPEEAAAQRVREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFRED 298

Query: 240 FNISYKGLKLPRPMRRWTERPVT------------RRPLPFKWLSIPLGLQQRDVIGIAE 299
           FNISYKG ++PRPMR W E  +T            ++P P +  +IPLGLQQRDVIGIAE
Sbjct: 299 FNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358

Query: 300 TGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHT 359
           TGSGKTAAFVLPMLAY++RLP ++EENE +GPYAVVMAPTRELAQQIE+ET KF+HYL  
Sbjct: 359 TGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGF 418

Query: 360 RVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDM 419
           RV SIVGGQSIEEQG KI QGCEI+IATPGRL+DCLERRY VLNQCNYVVLDEADRMIDM
Sbjct: 419 RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 478

Query: 420 GFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVV 479
           GF PQV GVLD MPSSNLKPENE EELDEKKIYRTTYMFSATM P VERLARKYLRNPVV
Sbjct: 479 GFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVV 538

Query: 480 VTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDK 539
           VTIGT GK TDLISQHVIM KE++ F+RLQ LLD LG +TAIVFVNTKKN D +AK+LDK
Sbjct: 539 VTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDK 598

Query: 540 AGHCVATLHGGKSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIE 599
           AG+ V TLHGGKSQEQREISLEGFR K+Y VLVAT+V GRGIDIPDVAHV+NYDMP +IE
Sbjct: 599 AGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIE 658

Query: 600 MYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARHEASKFKPGC 610
           MYTHRIGRTGRAGK+GVAT+FLTL D++VFYDLKQ L++SNS VPPELARHEAS+FKPG 
Sbjct: 659 MYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGT 718

[Close]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot
Match: Q53RK8 (DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708600 PE=2 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 5.6e-232
Identity = 417/620 (67.26%), Postives = 481/620 (77.58%), Query Frame = 0


Query: 49  DSADNHKPYNVDSRDRDRDRY---RDREEEEAESAR----TKRQRDKEFDANKEHYLGTK 108
           DS+   +      RDRDRDR    RDRE  + E  R     +R+R+KE DA KE YLG+K
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGDREKDRLEKMAEREREKELDAIKEQYLGSK 173

Query: 109 KPKKRVVKPTDKFHFSFDWDKADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNL- 168
           KPKKRV+KP++KF FSFDW+  +DTSRDMN LYQ PHEA+LL+GRGF A +DRREQK + 
Sbjct: 174 KPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQSPHEARLLYGRGFLAGIDRREQKKVA 233

Query: 169 -----------------------------------------MRVDPHWSEKKLEEMTERD 228
                                                    MRVD HW++K L+EMTERD
Sbjct: 234 AAHEKETRAEQRRKAGLDDRPEDDAVDKKEADAAAKYDAFDMRVDRHWTQKSLDEMTERD 293

Query: 229 WRIFKEDFNISYKGLKLPRPMRRWTERPV------------TRRPLPFKWLSIPLGLQQR 288
           WRIF+EDFNISYKG K+PRPMR+W+E  +             + P P +  SIPLGLQQR
Sbjct: 294 WRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQR 353

Query: 289 DVIGIAETGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVMAPTRELAQQIEDETKK 348
           DVIGIAETGSGKTAAFVLPML+Y+ RLP I+EENEA+GPYAVVMAPTRELAQQIE+ET K
Sbjct: 354 DVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 413

Query: 349 FSHYLHTRVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDE 408
           F+ YL  +VVSIVGGQSIEEQGFKIRQGCE++IATPGRLLDCLERRY VLNQCNYVVLDE
Sbjct: 414 FATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDE 473

Query: 409 ADRMIDMGFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTYMFSATMSPAVERLARK 468
           ADRMIDMGF PQV GVLD MPSSNLKPENE+EELD K IYRTTYMFSATM PAVERLARK
Sbjct: 474 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPAVERLARK 533

Query: 469 YLRNPVVVTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDY 528
           YLRNPVVVTIGT GKATDLI+Q+VIM KE++   RLQ +L +LG + AIVF NTKK+ D 
Sbjct: 534 YLRNPVVVTIGTAGKATDLITQNVIMTKESEKMSRLQKILTDLGDKPAIVFCNTKKSADA 593

Query: 529 VAKSLDKAGHCVATLHGGKSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNY 588
            AK LDKAG  V TLHGGKSQEQRE SL+GFR +++ VLVAT+VAGRGIDIPDVAHV+NY
Sbjct: 594 RAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINY 653

Query: 589 DMPSNIEMYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARHEA 608
           +MPS+I+ YTHRIGRTGRAGK G+AT+FLTL ++D+F+DLKQ LI+SNSPVPPELARHEA
Sbjct: 654 EMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLIQSNSPVPPELARHEA 713

[Close]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot
Match: Q9FZ92 (Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis thaliana OX=3702 GN=RH44 PE=5 SV=2)

HSP 1 Score: 712.2 bits (1837), Expect = 4.9e-204
Identity = 391/629 (62.16%), Postives = 460/629 (73.13%), Query Frame = 0


Query: 13  GFSSSKYLQVVIDF----KPVFSTKAQRQQLAFQR----------------RTSSFDSAD 72
           GF  +   +  +DF    KPVF TKA R++LA +R                  S+ D+ D
Sbjct: 7   GFMKTAMEKKTLDFDNLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQISRSNSDNDD 66

Query: 73  NHKPYNVD-----SRDRDRDRYRDREEEEAE-SARTKR----QRDKEFDANKEHYLGTKK 132
            ++P +V      S D DR+R  DRE  E E  AR ++    +R+KE +A KE YLGT K
Sbjct: 67  GNRPRDVKRERHRSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTK 126

Query: 133 PKKRVVKPTDKFHFSFDWDKADDT-SRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNLM 192
           PKKRV+    K +F FDW+  +DT S +MN+LYQ PHEAQ LFGRG RA +DRREQK LM
Sbjct: 127 PKKRVIMKPSK-NFRFDWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLM 186

Query: 193 ----------RVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVTRR 252
                       D HWSEKKLEEM ERDWRIFKEDFNISY+G K+P PMR W E      
Sbjct: 187 TGKHEREKREEEDKHWSEKKLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEE------ 246

Query: 253 PLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVM 312
                  +IPLGL+QRDVIGI+ TGSGKTAAFVLPMLAY++RLP + EEN+ +GPYA+VM
Sbjct: 247 -------TIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVM 306

Query: 313 APTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLE 372
            PTRELA QIE+ET KFS YL  + VSI G +SIE+Q  K+ QGCEI+IATPGRLLDCLE
Sbjct: 307 VPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLE 366

Query: 373 RRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTY 432
           RRYVVLNQCNY+VLDEADRMIDM F PQV  VLDVMP SNLKPE E+EEL+EKKIYRTTY
Sbjct: 367 RRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTY 426

Query: 433 MFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLG 492
           MFSATM  +VERLARK+LRNPVVVTI   G+ T  I+Q VIM KE+D F RL+ L+D+LG
Sbjct: 427 MFSATMLLSVERLARKFLRNPVVVTI---GETTKFITQQVIMTKESDKFSRLKKLIDDLG 486

Query: 493 -HRTAIVFVNTKKNVDYVAKSLDKAGHC-VATLHGGKSQEQREISLEGFRTKQYKVLVAT 552
             +TAIVFVNT+  VDY+ K+L+K G C V TLH GKSQEQR+ SLE F+ K++ VLV T
Sbjct: 487 DDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTT 546

Query: 553 NVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQ 599
           +V GRG+DI D+A V+NYDMP+ +++YTHRIGRTGRAGKTGVATTFLTL D DVFY LKQ
Sbjct: 547 DVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQ 606

[Close]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot
Match: Q9BUQ8 (Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens OX=9606 GN=DDX23 PE=1 SV=3)

HSP 1 Score: 530.8 bits (1366), Expect = 2.0e-149
Identity = 308/663 (46.46%), Postives = 409/663 (61.69%), Query Frame = 0


Query: 27  KPVFSTKAQRQQLAFQRRTSSFDS---------------ADNHKPYNVDSRDRDRDRYRD 86
           KP F +KA+R+  A +RR    +                 D  +    D ++R+R   R+
Sbjct: 160 KPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRE 219

Query: 87  R---------EEEEAESARTKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDK 146
           R         +EE  +  R ++ + KE  A KE YLG  K ++R     D+  F F+WD 
Sbjct: 220 RMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFEWDA 279

Query: 147 ADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQK--------NLMRV----------- 206
           ++DTS D N LY+  H+ QLL GRGF A +D ++QK        +LM             
Sbjct: 280 SEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEE 339

Query: 207 ----------------DPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 266
                           D HWS+KKL+EMT+RDWRIF+ED++I+ KG K+P P+R W +  
Sbjct: 340 ARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS 399

Query: 267 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 326
           +             + P P +  +IP+GLQ RD+IG+AETGSGKTAAF++P+L ++  LP
Sbjct: 400 LPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLP 459

Query: 327 RINEENEAD-GPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQ 386
           +I+   E+D GPYA+++APTRELAQQIE+ET KF   L  R V+++GG S E+QGF++R 
Sbjct: 460 KIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 519

Query: 387 GCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKP 446
           GCEI+IATPGRL+D LE RY+VL++C YVVLDEADRMIDMGF P V+ +L+ MP SN KP
Sbjct: 520 GCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKP 579

Query: 447 ENENEELDEKKI---------YRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATD 506
           + +  E  EK +         YR T MF+ATM PAVERLAR YLR P VV IG+ GK  +
Sbjct: 580 DTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHE 639

Query: 507 LISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGG 566
            + Q V +  E++   +L  +L+       I+FVN KK  D +AKSL+K G+   TLHGG
Sbjct: 640 RVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGG 699

Query: 567 KSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGR 608
           K QEQRE +L   +     +LVAT+VAGRGIDI DV+ VVNYDM  NIE Y HRIGRTGR
Sbjct: 700 KGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGR 759

[Close]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot
Match: Q5RC67 (Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii OX=9601 GN=DDX23 PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.3e-148
Identity = 307/663 (46.30%), Postives = 408/663 (61.54%), Query Frame = 0


Query: 27  KPVFSTKAQRQQLAFQRRTSSFDS---------------ADNHKPYNVDSRDRDRDRYRD 86
           KP F +KA+R+  A +RR    +                 D  +    D ++R+R   R+
Sbjct: 160 KPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRE 219

Query: 87  R---------EEEEAESARTKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDK 146
           R         +EE  +  R ++ + KE  A KE YLG  K ++R     D+  F F+WD 
Sbjct: 220 RMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFEWDA 279

Query: 147 ADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQK--------NLMRV----------- 206
           ++DTS D N LY+  H+ QLL GRGF A +D ++QK        +LM             
Sbjct: 280 SEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEE 339

Query: 207 ----------------DPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 266
                           D HWS+KKL+EMT+RDWRIF+ED++I+ KG K+P P+R W +  
Sbjct: 340 ARFRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS 399

Query: 267 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 326
           +             + P P +  +IP+GLQ RD+IG+AETGSGKTAAF++P+L ++  LP
Sbjct: 400 LPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLP 459

Query: 327 RINEENEAD-GPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQ 386
           +I+   E+D GPYA+++APTRELAQQIE+ET KF   L  R V+++GG S E+QGF++R 
Sbjct: 460 KIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRM 519

Query: 387 GCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKP 446
           GCEI+IATPGRL+D LE RY+V ++C YVVLDEADRMIDMGF P V+ +L+ MP SN KP
Sbjct: 520 GCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKP 579

Query: 447 ENENEELDEKKI---------YRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATD 506
           + +  E  EK +         YR T MF+ATM PAVERLAR YLR P VV IG+ GK  +
Sbjct: 580 DTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHE 639

Query: 507 LISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGG 566
            + Q V +  E++   +L  +L+       I+FVN KK  D +AKSL+K G+   TLHGG
Sbjct: 640 RVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGG 699

Query: 567 KSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGR 608
           K QEQRE +L   +     +LVAT+VAGRGIDI DV+ VVNYDM  NIE Y HRIGRTGR
Sbjct: 700 KGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGR 759

[Close]

BLAST of Sed0001160 vs. ExPASy TrEMBL
Match: A0A0A0L7D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257080 PE=3 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 3.0e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--VSGSSSSKPLHAAVDSKPVFLTKAQREQLALQRRQDEISHQRRRQDQLLLSN 63

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 64  SQKPLSDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 123

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 124 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 183

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 184 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 243

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 244 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 303

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 304 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 363

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 364 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 423

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 424 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 483

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 484 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 543

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 544 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 603

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 604 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 663

[Close]

BLAST of Sed0001160 vs. ExPASy TrEMBL
Match: A0A6J1C876 (DEAD-box ATP-dependent RNA helicase 21 OS=Momordica charantia OX=3673 GN=LOC111009232 PE=3 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.9e-268
Identity = 505/712 (70.93%), Postives = 538/712 (75.56%), Query Frame = 0


Query: 6   VANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTS------------------- 65
           V  D  AG SSSK L    D KPVF TKAQR+QLA QRR                     
Sbjct: 5   VGADDLAGSSSSKSLHAATDNKPVFLTKAQREQLALQRRQEEISLQRNRQDQLLSNSQKP 64

Query: 66  SFDSADNHKPYNVD------------SRDRDRDRYRDRE----------------EEEA- 125
           S DS DNHKP + D             RDRDRDR RDRE                EEEA 
Sbjct: 65  SSDSVDNHKPSDFDRRDRDRGREREKDRDRDRDRTRDRERDRDRDLDRRNREKEREEEAK 124

Query: 126 --ESAR----TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRDMN 185
             E AR     +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRDMN
Sbjct: 125 ARERARLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN 184

Query: 186 LLYQYPHEAQLLFGRGFRASMDRREQKNL------------------------------- 245
           LLYQ PHEAQLLFGRGFRA MDRREQK L                               
Sbjct: 185 LLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQKLK 244

Query: 246 -----------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVT 305
                      MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  +T
Sbjct: 245 EKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLT 304

Query: 306 ------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLPRI 365
                       + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP I
Sbjct: 305 TELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPI 364

Query: 366 NEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQGCE 425
           NEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQGCE
Sbjct: 365 NEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGCE 424

Query: 426 IIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPENE 485
           ++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPENE
Sbjct: 425 VVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENE 484

Query: 486 NEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKKET 545
           +EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM KE+
Sbjct: 485 DEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKES 544

Query: 546 DIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISLEG 605
           + FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISLEG
Sbjct: 545 EKFYRLQNLLDNLGDKTAIVFVNTKKNADNVAKNLDKAGYRVTTLHGGKSQEQREISLEG 604

Query: 606 FRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 610
           FRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT
Sbjct: 605 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLT 664

[Close]

BLAST of Sed0001160 vs. ExPASy TrEMBL
Match: A0A5D3DWS5 (DEAD-box ATP-dependent RNA helicase 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00870 PE=3 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.9e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--VSGSSSSKPLHAAVDNKPVFLTKAQREQLALQRRQDEISLQRRRQDQLLLSN 63

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 64  SQKPLPDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 123

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 124 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 183

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 184 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 243

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 244 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 303

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 304 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 363

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 364 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 423

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 424 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 483

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 484 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 543

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 544 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 603

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 604 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 663

[Close]

BLAST of Sed0001160 vs. ExPASy TrEMBL
Match: A0A1S3CFF8 (DEAD-box ATP-dependent RNA helicase 21 OS=Cucumis melo OX=3656 GN=LOC103500123 PE=3 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.9e-268
Identity = 502/714 (70.31%), Postives = 539/714 (75.49%), Query Frame = 0


Query: 3   NHGVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTSSF-------------- 62
           N GV N   +G SSSK L   +D KPVF TKAQR+QLA QRR                  
Sbjct: 4   NPGVEN--VSGSSSSKPLHAAVDNKPVFLTKAQREQLALQRRQDEISLQRRHQDQLLLSN 63

Query: 63  ------DSADNHKPYNVD----------SRDRDRDRYRDRE----------------EEE 122
                 DS DNHKP + D           RDRDRDR RDRE                EEE
Sbjct: 64  SQKPLPDSVDNHKPSDSDRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEE 123

Query: 123 AESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSRD 182
           A++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSRD
Sbjct: 124 AKARERTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 183

Query: 183 MNLLYQYPHEAQLLFGRGFRASMDRREQKNL----------------------------- 242
           MNLLYQ PHEAQLLFGRGFRA MDRREQK L                             
Sbjct: 184 MNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQK 243

Query: 243 -------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERP 302
                        MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG K+PRPMR WTE  
Sbjct: 244 LKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESK 303

Query: 303 VT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 362
           +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RLP
Sbjct: 304 LTTELLKAVERAGYKSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLP 363

Query: 363 RINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQG 422
            INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQG
Sbjct: 364 PINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQG 423

Query: 423 CEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKPE 482
           CE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKPE
Sbjct: 424 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 483

Query: 483 NENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMKK 542
           NE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVVTIGT GKATDLISQHVIM K
Sbjct: 484 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMK 543

Query: 543 ETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREISL 602
           E++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREISL
Sbjct: 544 ESEKFYRLQNLLDNLGDKTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISL 603

Query: 603 EGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATTF 610
           EGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATTF
Sbjct: 604 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTF 663

[Close]

BLAST of Sed0001160 vs. ExPASy TrEMBL
Match: A0A6J1J6T0 (DEAD-box ATP-dependent RNA helicase 21 OS=Cucurbita maxima OX=3661 GN=LOC111481886 PE=3 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.2e-266
Identity = 500/715 (69.93%), Postives = 538/715 (75.24%), Query Frame = 0


Query: 5   GVANDLAAGFSSSKYLQVVIDFKPVFSTKAQRQQLAFQRRTS------------------ 64
           GV N   AG SSSK L   +D KPVF TKAQR+QLA QRR                    
Sbjct: 6   GVEN--LAGSSSSKPLVAAVDNKPVFLTKAQREQLALQRRQEEISLQRRRQDQLLSSSQK 65

Query: 65  -SFDSADNHKPYNVDSRDRD--------------RDRYRDRE----------------EE 124
            S+DS DNHKP + D RDRD              RDR RDRE                EE
Sbjct: 66  PSYDSVDNHKPSDSDRRDRDRGRDRERDRDRDRERDRARDRERDRDRDLERRNREKEREE 125

Query: 125 EAESAR-------TKRQRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDWDKADDTSR 184
           EA++          +R+RDKE DA KE YLG+KKPKKRV+KP++KF FSFDW+  +DTSR
Sbjct: 126 EAKAREHTRLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSR 185

Query: 185 DMNLLYQYPHEAQLLFGRGFRASMDRREQKNL---------------------------- 244
           DMNLLYQ PHEAQLLFGRGFRA MDRREQK L                            
Sbjct: 186 DMNLLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQ 245

Query: 245 --------------MRVDPHWSEKKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTER 304
                         MRVD HWSEKKLEEMTERDWRIF+EDFNISYKG ++PRPMR W E 
Sbjct: 246 KLKEKAADLYDSFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRSWNES 305

Query: 305 PVT------------RRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARL 364
            +T            + P P +  +IPLGLQQRDVIGIAETGSGKTAAFVLPMLAY+ RL
Sbjct: 306 KLTTELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRL 365

Query: 365 PRINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIRQ 424
           P INEENEA+GPYAVVMAPTRELAQQIEDET KFSHYL  +VVSIVGGQSIEEQGFKIRQ
Sbjct: 366 PPINEENEAEGPYAVVMAPTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQ 425

Query: 425 GCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLKP 484
           GCE++IATPGRLLDCLERRY VLNQCNYVVLDEADRMIDMGF PQV GVLD MPSSNLKP
Sbjct: 426 GCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKP 485

Query: 485 ENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIMK 544
           ENE+EELDEKKIYRTTYMFSATM PAVERLARKYLRNPVVV IGT GKATDLISQHVIM 
Sbjct: 486 ENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVNIGTAGKATDLISQHVIMM 545

Query: 545 KETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQEQREIS 604
           KE++ FYRLQNLLDNLG +TAIVFVNTKKN D VAK+LDKAG+ V TLHGGKSQEQREIS
Sbjct: 546 KESEKFYRLQNLLDNLGDKTAIVFVNTKKNADNVAKNLDKAGYRVTTLHGGKSQEQREIS 605

Query: 605 LEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGKTGVATT 610
           LEGFRTK+Y VLVAT+VAGRGIDIPDVAHV+NYDMPSNIEMYTHRIGRTGRAGKTGVATT
Sbjct: 606 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATT 665

[Close]

BLAST of Sed0001160 vs. TAIR 10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 840.9 bits (2171), Expect = 6.6e-244
Identity = 429/615 (69.76%), Postives = 487/615 (79.19%), Query Frame = 0


Query: 60  DSRDRDRD---RYRDREEEEAESARTK--------RQRDKEFDANKEHYLGTKKPKKRVV 119
           D R+RDR+   R R++E EE   AR K        R+++KE DA KE YLG KKPKKRV+
Sbjct: 119 DRRERDREPDRRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVI 178

Query: 120 KPTDKFHFSFDWDKADDTSRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNL-------- 179
           +P++KF FSFDW+  +DTSRDMN+LYQ PHEAQLLFGRGFRA MDRREQK          
Sbjct: 179 RPSEKFRFSFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEM 238

Query: 180 ----------------------------------MRVDPHWSEKKLEEMTERDWRIFKED 239
                                             MRVD HWS+K+LEEMTERDWRIF+ED
Sbjct: 239 RDEIRKKDGIVEKPEEAAAQRVREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFRED 298

Query: 240 FNISYKGLKLPRPMRRWTERPVT------------RRPLPFKWLSIPLGLQQRDVIGIAE 299
           FNISYKG ++PRPMR W E  +T            ++P P +  +IPLGLQQRDVIGIAE
Sbjct: 299 FNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAE 358

Query: 300 TGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVMAPTRELAQQIEDETKKFSHYLHT 359
           TGSGKTAAFVLPMLAY++RLP ++EENE +GPYAVVMAPTRELAQQIE+ET KF+HYL  
Sbjct: 359 TGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGF 418

Query: 360 RVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDM 419
           RV SIVGGQSIEEQG KI QGCEI+IATPGRL+DCLERRY VLNQCNYVVLDEADRMIDM
Sbjct: 419 RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 478

Query: 420 GFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVV 479
           GF PQV GVLD MPSSNLKPENE EELDEKKIYRTTYMFSATM P VERLARKYLRNPVV
Sbjct: 479 GFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVV 538

Query: 480 VTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLGHRTAIVFVNTKKNVDYVAKSLDK 539
           VTIGT GK TDLISQHVIM KE++ F+RLQ LLD LG +TAIVFVNTKKN D +AK+LDK
Sbjct: 539 VTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDK 598

Query: 540 AGHCVATLHGGKSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIE 599
           AG+ V TLHGGKSQEQREISLEGFR K+Y VLVAT+V GRGIDIPDVAHV+NYDMP +IE
Sbjct: 599 AGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIE 658

Query: 600 MYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARHEASKFKPGC 610
           MYTHRIGRTGRAGK+GVAT+FLTL D++VFYDLKQ L++SNS VPPELARHEAS+FKPG 
Sbjct: 659 MYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGT 718

[Close]

BLAST of Sed0001160 vs. TAIR 10
Match: AT1G28180.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 710.3 bits (1832), Expect = 1.3e-204
Identity = 387/611 (63.34%), Postives = 453/611 (74.14%), Query Frame = 0


Query: 27  KPVFSTKAQRQQLAFQR----------------RTSSFDSADNHKPYNVD-----SRDRD 86
           KPVF TKA R++LA +R                  S+ D+ D ++P +V      S D D
Sbjct: 17  KPVFLTKAHRKELALKRCQDEIADRDRRSIVQISRSNSDNDDGNRPRDVKRERHRSHDHD 76

Query: 87  RDRYRDREEEEAE-SARTKR----QRDKEFDANKEHYLGTKKPKKRVVKPTDKFHFSFDW 146
           R+R  DRE  E E  AR ++    +R+KE +A KE YLGT KPKKRV+    K +F FDW
Sbjct: 77  RNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSK-NFRFDW 136

Query: 147 DKADDT-SRDMNLLYQYPHEAQLLFGRGFRASMDRREQKNLM----------RVDPHWSE 206
           +  +DT S +MN+LYQ PHEAQ LFGRG RA +DRREQK LM            D HWSE
Sbjct: 137 ENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKREEEDKHWSE 196

Query: 207 KKLEEMTERDWRIFKEDFNISYKGLKLPRPMRRWTERPVTRRPLPFKWLSIPLGLQQRDV 266
           KKLEEM ERDWRIFKEDFNISY+G K+P PMR W E             +IPLGL+QRDV
Sbjct: 197 KKLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEE-------------TIPLGLEQRDV 256

Query: 267 IGIAETGSGKTAAFVLPMLAYVARLPRINEENEADGPYAVVMAPTRELAQQIEDETKKFS 326
           IGI+ TGSGKTAAFVLPMLAY++RLP + EEN+ +GPYA+VM PTRELA QIE+ET KFS
Sbjct: 257 IGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFS 316

Query: 327 HYLHTRVVSIVGGQSIEEQGFKIRQGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEAD 386
            YL  + VSI G +SIE+Q  K+ QGCEI+IATPGRLLDCLERRYVVLNQCNY+VLDEAD
Sbjct: 317 RYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEAD 376

Query: 387 RMIDMGFGPQVKGVLDVMPSSNLKPENENEELDEKKIYRTTYMFSATMSPAVERLARKYL 446
           RMIDM F PQV  VLDVMP SNLKPE E+EEL+EKKIYRTTYMFSATM  +VERLARK+L
Sbjct: 377 RMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFL 436

Query: 447 RNPVVVTIGTEGKATDLISQHVIMKKETDIFYRLQNLLDNLG-HRTAIVFVNTKKNVDYV 506
           RNPVVVTI   G+ T  I+Q VIM KE+D F RL+ L+D+LG  +TAIVFVNT+  VDY+
Sbjct: 437 RNPVVVTI---GETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYI 496

Query: 507 AKSLDKAGHC-VATLHGGKSQEQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNY 566
            K+L+K G C V TLH GKSQEQR+ SLE F+ K++ VLV T+V GRG+DI D+A V+NY
Sbjct: 497 VKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINY 556

Query: 567 DMPSNIEMYTHRIGRTGRAGKTGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARHEA 599
           DMP+ +++YTHRIGRTGRAGKTGVATTFLTL D DVFY LKQKL E NS VPPELARHEA
Sbjct: 557 DMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEA 610

[Close]

BLAST of Sed0001160 vs. TAIR 10
Match: AT3G58510.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-77
Identity = 169/457 (36.98%), Postives = 263/457 (57.55%), Query Frame = 0


Query: 153 DRREQKNLMRVDPHWSEKKLEEM-TERDWRIFK----EDFNISYKGLKLPRPMRRWTE-- 212
           DRRE++    V+P   + +LE + TE++         ED  +   G  +P P+  + +  
Sbjct: 102 DRRERE----VNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 161

Query: 213 ----------RPVTRRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 272
                     R    RP P +  +IP+ L +RD++  A+TGSGKTAAF  P+++ + +  
Sbjct: 162 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 221

Query: 273 RINEE--NEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIR 332
            +     + A  P+AV+++PTRELA QI DE KKFS+    +VV   GG  I +Q  ++ 
Sbjct: 222 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 281

Query: 333 QGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLK 392
           +GC+I++ATPGRL D LER  V +    ++ LDEADRM+DMGF PQ++ +++ M   ++ 
Sbjct: 282 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQM---DMP 341

Query: 393 PENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIM 452
           P             R T +FSAT    ++RLA  ++ N + + +G  G +TDLI+Q V  
Sbjct: 342 PRG----------VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEF 401

Query: 453 KKETDIFYRLQNLL-----DNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQ 512
            +E+D    L +LL             +VFV TK+  D +   L        ++HG ++Q
Sbjct: 402 VQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQ 461

Query: 513 EQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGK 572
           ++RE++L  F+T +  +LVAT+VA RG+DIP VAHVVN+D+P++I+ Y HRIGRTGRAGK
Sbjct: 462 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 521

Query: 573 TGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARH 586
           +G+AT F    ++ +   L + + E+N  VP  L R+
Sbjct: 522 SGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541

[Close]

BLAST of Sed0001160 vs. TAIR 10
Match: AT3G58510.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-77
Identity = 169/457 (36.98%), Postives = 263/457 (57.55%), Query Frame = 0


Query: 153 DRREQKNLMRVDPHWSEKKLEEM-TERDWRIFK----EDFNISYKGLKLPRPMRRWTE-- 212
           DRRE++    V+P   + +LE + TE++         ED  +   G  +P P+  + +  
Sbjct: 102 DRRERE----VNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 161

Query: 213 ----------RPVTRRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 272
                     R    RP P +  +IP+ L +RD++  A+TGSGKTAAF  P+++ + +  
Sbjct: 162 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 221

Query: 273 RINEE--NEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIR 332
            +     + A  P+AV+++PTRELA QI DE KKFS+    +VV   GG  I +Q  ++ 
Sbjct: 222 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 281

Query: 333 QGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLK 392
           +GC+I++ATPGRL D LER  V +    ++ LDEADRM+DMGF PQ++ +++ M   ++ 
Sbjct: 282 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQM---DMP 341

Query: 393 PENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIM 452
           P             R T +FSAT    ++RLA  ++ N + + +G  G +TDLI+Q V  
Sbjct: 342 PRG----------VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEF 401

Query: 453 KKETDIFYRLQNLL-----DNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQ 512
            +E+D    L +LL             +VFV TK+  D +   L        ++HG ++Q
Sbjct: 402 VQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQ 461

Query: 513 EQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGK 572
           ++RE++L  F+T +  +LVAT+VA RG+DIP VAHVVN+D+P++I+ Y HRIGRTGRAGK
Sbjct: 462 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 521

Query: 573 TGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARH 586
           +G+AT F    ++ +   L + + E+N  VP  L R+
Sbjct: 522 SGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541

[Close]

BLAST of Sed0001160 vs. TAIR 10
Match: AT3G58510.3 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-77
Identity = 169/457 (36.98%), Postives = 263/457 (57.55%), Query Frame = 0


Query: 153 DRREQKNLMRVDPHWSEKKLEEM-TERDWRIFK----EDFNISYKGLKLPRPMRRWTE-- 212
           DRRE++    V+P   + +LE + TE++         ED  +   G  +P P+  + +  
Sbjct: 102 DRRERE----VNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 161

Query: 213 ----------RPVTRRPLPFKWLSIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYVARLP 272
                     R    RP P +  +IP+ L +RD++  A+TGSGKTAAF  P+++ + +  
Sbjct: 162 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 221

Query: 273 RINEE--NEADGPYAVVMAPTRELAQQIEDETKKFSHYLHTRVVSIVGGQSIEEQGFKIR 332
            +     + A  P+AV+++PTRELA QI DE KKFS+    +VV   GG  I +Q  ++ 
Sbjct: 222 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 281

Query: 333 QGCEIIIATPGRLLDCLERRYVVLNQCNYVVLDEADRMIDMGFGPQVKGVLDVMPSSNLK 392
           +GC+I++ATPGRL D LER  V +    ++ LDEADRM+DMGF PQ++ +++ M   ++ 
Sbjct: 282 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQM---DMP 341

Query: 393 PENENEELDEKKIYRTTYMFSATMSPAVERLARKYLRNPVVVTIGTEGKATDLISQHVIM 452
           P             R T +FSAT    ++RLA  ++ N + + +G  G +TDLI+Q V  
Sbjct: 342 PRG----------VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEF 401

Query: 453 KKETDIFYRLQNLL-----DNLGHRTAIVFVNTKKNVDYVAKSLDKAGHCVATLHGGKSQ 512
            +E+D    L +LL             +VFV TK+  D +   L        ++HG ++Q
Sbjct: 402 VQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQ 461

Query: 513 EQREISLEGFRTKQYKVLVATNVAGRGIDIPDVAHVVNYDMPSNIEMYTHRIGRTGRAGK 572
           ++RE++L  F+T +  +LVAT+VA RG+DIP VAHVVN+D+P++I+ Y HRIGRTGRAGK
Sbjct: 462 QEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 521

Query: 573 TGVATTFLTLRDSDVFYDLKQKLIESNSPVPPELARH 586
           +G+AT F    ++ +   L + + E+N  VP  L R+
Sbjct: 522 SGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541

The following BLAST results are available for this feature:

BLAST of Sed0001160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883557.1	1.2e-268	70.79	DEAD-box ATP-dependent RNA helicase 21 [Benincasa hispida] >XP_038883631.1 DEAD-...	[more]
XP_004145628.1	6.1e-268	70.31	DEAD-box ATP-dependent RNA helicase 21 [Cucumis sativus]	[more]
KAE8650563.1	6.1e-268	70.31	hypothetical protein Csa_010381 [Cucumis sativus]	[more]
KAA0048485.1	8.0e-268	70.31	DEAD-box ATP-dependent RNA helicase 21 [Cucumis melo var. makuwa] >TYK28277.1 DE...	[more]
XP_022137940.1	8.0e-268	70.93	DEAD-box ATP-dependent RNA helicase 21 [Momordica charantia] >XP_022137941.1 DEA...	[more]

BLAST of Sed0001160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93008	9.2e-243	69.76	DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana OX=3702 GN=RH21 P...	[more]
Q53RK8	5.6e-232	67.26	DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FZ92	4.9e-204	62.16	Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9BUQ8	2.0e-149	46.46	Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens OX=9606 GN=DDX23 PE=1 ...	[more]
Q5RC67	1.3e-148	46.30	Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii OX=9601 GN=DDX23 PE=2 ...	[more]

BLAST of Sed0001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7D0	3.0e-268	70.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257080 PE=3 SV=1	[more]
A0A6J1C876	3.9e-268	70.93	DEAD-box ATP-dependent RNA helicase 21 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3DWS5	3.9e-268	70.31	DEAD-box ATP-dependent RNA helicase 21 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CFF8	3.9e-268	70.31	DEAD-box ATP-dependent RNA helicase 21 OS=Cucumis melo OX=3656 GN=LOC103500123 P...	[more]
A0A6J1J6T0	1.2e-266	69.93	DEAD-box ATP-dependent RNA helicase 21 OS=Cucurbita maxima OX=3661 GN=LOC1114818...	[more]

BLAST of Sed0001160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33730.1	6.6e-244	69.76	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G28180.1	1.3e-204	63.34	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G58510.1	2.1e-77	36.98	DEA(D/H)-box RNA helicase family protein	[more]
AT3G58510.2	2.1e-77	36.98	DEA(D/H)-box RNA helicase family protein	[more]
AT3G58510.3	2.1e-77	36.98	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 466..547 e-value: 3.0E-35 score: 133.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 443..547 e-value: 4.5E-31 score: 107.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 442..586 score: 23.679443
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 208..430 e-value: 1.3E-55 score: 200.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 220..415 score: 29.924574
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 421..602 e-value: 6.6E-52 score: 177.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 163..419 e-value: 1.9E-75 score: 255.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 264..569
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 218..403 e-value: 1.8E-47 score: 161.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..98
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 158..602
None	No IPR available	PANTHER	PTHR47958:SF46	SUBFAMILY NOT NAMED	coord: 158..602
None	No IPR available	CDD	cd17945	DEADc_DDX23	coord: 211..416 e-value: 1.33917E-133 score: 387.831
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 427..556 e-value: 1.46226E-57 score: 187.715
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 344..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001160.1	Sed0001160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding