Sed0001142 (gene) Chayote v1

Overview
NameSed0001142
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPrefoldin subunit 6
LocationLG10: 874378 .. 883438 (-)
RNA-Seq ExpressionSed0001142
SyntenySed0001142
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAGAACAGGTAGCGAAGAAAGTAACGAAGCAGCGAAGTTGCAGACCGGGATCCGTCACATATATCAGGAAGAAAATGCAGAGCGATCTCAAGGATCTCAGAAATTTGCAGAAAGGTAATGATCGTAACTTCTATCTTCCTCTCCTCCGATTCAGCCTTCACATTCTTGTAATTTCACTTTCAATCCTTCAAATTCCATGATTCTACGATTCTACGCATTTTCTTGTGAAATTTTTGGTTTAAACTTTGAAGATCGGATGTATGAATCGAAAATTCTGGTATGGTGAATGATTTTCCAGGCATTGCGAATAATGACGAAGCTGGATTGAAGTATGATACAGAGCTAGGCGAAAACAAGCTTGCTCCCCAGGTTATAGCATTTCTTCACTTGAATAACGATTTGCTTCTACTTCTTGCTTGATCTATGAGAAATTAACGGTGAATATGTATCTGTTTGAAGTTTTTTTTGTGTATTTCTTGTCAAATCGTTTCGTGTTCGTATCCGCTTCATGTATTCTTGTTGTTTGAGTCGATTCTGCGATTGTTTTTGCTACCGCACTGGAAATCAGTTCATCTATGTCTCGGAACACATGATATTTGCGTTTATGGTATTCGATTCATTGAAGCGAGTGAAATTTGTTGGTTAATTGTTTGCCTCTGTGTATATCAAGAAAGGAACTGTCGTGTTCTAATCTTCAGGTTGGAAACAAGTTTGTTTTCCAGGTTGTTGCATTAATTCACTTAAATCACTCTTTAATTCTACTTCTTGCTTGATTTATGAGAAATTATAGGTGCATATGAATCTGTTTGAAGTTTTTTTGTGCATTTCTCGTCAAATGGTTTCGTGTTCGACTCCGCTTCATGTTTATATGTTCTTTTCATAGTTTCTGCGATTGTTTTAGGTACCATTAGATTGATACCGCGCTGGAAATCAATTAAATTATGTCTCGAAACTCCTGATATTGCGTTTATTGTATTCAACTCTTTTTGGTTAATTGTTTGTCTCTGTGTATATCAAGAAAAGAGCTGTCGTGTTCTACTCTTCAAGTTGAATACGAGTTTGCTCCCGAAGTTGTAGCATTTATTCACTTAAACAACGCTTTACTTCTTCATAGATTTATGAGAAATTATGGGTGAATATGAATCTGTTTGAAGTTTTATTTGTATTTCTTGTCAAATCTTTTTGTGATCGACTCAGCTTCATGCCTACTTGTTATTTAAGTCAGATTCTGCAATTGTTATAGTGCACATTATATTGAGATTATTGTATATCAAGGAAGGAACTGTCGTGGTAGTCGTCGTTGCAAAGTCTGGGACGGTTGTTATACAGCGTCCAGGACTTATATCTTTAATTCTTGCATTCTTTTTGGCATAATGCAGGAGTTTGATTTGATGAAAGAGGTGTTGGGAATAAACACTATTCTAATATGGATCAATTATTCCCTCTCTTATGTTCCTAATGAAAAATCAGCAAGCATATAGCATGGTAGAAATATCAAGCACAACACAACGATTTTAACGTGGAAAAACCTCCTCAAGGCGAGGAGTAAAAAACCACGGACCGAAGTCGAATCTCCACTATAATCGATAATGGGCTACAACAAGTTCTCTCTAGTTACAACTAGAGGTATACAACACATAACAACTCAAGATAAACTAATCTTGGCAACAAACAACACAAATCAAGAGAGATAAATAGAAAGATCTCACAAAAATGTGGAACCGAATCGCCACTGGAATCTGGCTGTAGAAACCTCCAAATCCGATCTCCACCGTTCAGATTGAAGACCCTCGTGTCAAGAACACGCTGTCTAAATTTCAGCTCGATCCAACGGTGCAATTGATCGGAAACGCCAAAATACCGAAGCTGGGCAGAAACCTCTTCTCCTCTCTATTTACTTTCTCTCTCTAGGTTGTTTCTCTCTCTGGCTGCTGATTTCCAGCTCTCCCTTTGTTGTGTTCTTGTGTATTTTCTCTACCAAAGTGACAAAATGCACTTTAAAACACTTAGCCCTAATGGGCTTTATTTTATGGGCCTTCACAATGTGAATAAAAACCCAACAAATCTCCCCCTATTCACTGTGTGGAGGAACTTGCCATTCCCGCAGCGGAACGACAAAACTGAAGCTTCTCTCTTGGTAGATTCTTAGTCAGCATATCAGACCCATTATGATCTGTATGTACCTTCTCAAGCTCAAACAAGCCATCATTCAATGCATCTCTCATCCAGTGATACCTCACATCTATATGTTTAGTTATGGAATGAAATGTAGAGTTCTTACCAAGATGAATAGCACTCTGGTTGTCACAGAATATCACATACCGTTGTTGCTTAAAGCCAAGCTCATGTATAAACTGCTTCATCCACAACATCTCTTTGCACGCTTCTGCTGCAGCTATATATTCTGCTTCTGTAGTAGAAAGTGCAACGCACTTCTGTAGTCTTGACTGCCAAGACACTGCACCACCTGCAAACGTCATCAAATAACCCGAAGTAGACCGTCGGTTATCTAGATCTCCTGCCATATCTCGAATCAAGATAGCACAAGCAAGGGCTTTCCACTTCCAAATGTGAGCTTCAAACTGGAAGTGCCTCTCAAATATCTCATGATGCACTTGATCGCCTCCCAATGTCGTTTTTTCTGGATTGGACACAAATCGACTAACAACTCCAACAAAGCATGAGCAATATCAGTCTAGTACTCACCATGGCATACATCAAACTCCCAAGCTTCTTTGAAGCATATGGGACTTTCCTCATTTCTTCCTTCTCTTTATCATTAGAAGGACTCTGTTTGTTACTCAGTTTGAAATGACTGGAAAGAGGGGAGCTAACAACTTTAGCTTTGTCCATGTTAAATCTTTCAAGCACTTTCTCTATGTATTGCTCTGTGACATATATAACCTCTTGGATGCTCTATCTCGAACTATTCGAATTCCAAGAATCTTCTTTCTTTGGTCCCAAATCCTTCATGGCAAAGGATTTGCTCAACTGCTTTCTTCAACTGTCAATTCTAGAAACATTCCCGCCAACAATCAAAATGTCATCAACATAAAGCAATAGTATCACAAAATCATCATTAGAAAATTTTTGTACAAAGACACAATGGTGAAGTAGTCTTTTGTAGCCTTGCTCCCCATAACTCGACTCAAACTTCTTGTACCATTGCCTCGGTGCTTGTTTCAATCCATAAAGACTTTTCTTCAACTTGCACACAAGTTTCTCTTTGCCTTTCTCTTCAAAACCCTCAAGGTTGTTCCATATAGATTTCTTTATCTAAGTCTCCATGAAGAAATGCGGTCTTAACATCCATCCGCTCAACTTCTAAGTCAAGGCTAGTTTGCCAAACCCATAACAACTCGAATCGAAGACATCTTAACAACTGGAGCAAAAATTTCATCAAAGTCGATACCCTTTTTCTGACTGAACCCTTTAACAACTAGTCTCGCTTTATAACGCGGTCTTGAGGTGCTTTCTTGTTGTTTCACTCGATAAACTCACTTATTTTTCAGTGCGGTTTTCCCTTTAGGCAATTTAACAAGCTCAAAAGTGTGGTTCTCATGTAAAGATTTCATCTCATCTTTCATTGCATCAATCCACTCTCTTTTGTGCTCATCTTCTATAGCCTCTTCATAACTCTCAGGTTCTCCCCCGTCAGTCAATAACACATATTCATCAGCAGAATATCTTGTTGACTGACGACGATCTCTGATAGACCTTCTGAGTGGAACATCGATAGGAACTTCAGCTTCTGACAATTGTTCCTGAATATCACCATCTACCTCAACATGTTCATCACCTTCTATCTCATCTGAATTAACAAACTGATCATTATGAATTTCATTCTCAATCTGTGTAGAAGGTTGTGCCAAAGGAACTGTATCTAAGTCAATCAGATCATCACTAATCTCTGACTCTGTTTCATCAGTTTTATTAATGTCTTGTAAGGTTTGGTCTTCAACAAACACAACATCTCGACTTCTAATAAGCTTTTTCTTCACTGGATCATACAACCTGTAGCCAAACTCATCTTGACCATAGCCAAGGAACACACATGGTCTTGTCTTTGCATCAAGCTTCGATCTCTCATCTTTAGGAACATGAACGAAAGCTTTACAACCAAAGACGCGAAGATGACTATAAGATATGTCTTTCTTTGACCAAATTCTGTTAGGGACTTCATTTCCCAAAGGAACACATGGTGTGAGATTCAGAACATGTACAACTGTATTCAATGCTTCACCCCAAAACATTTTGGCTAACTGTGACTGTGAAAGCAAACATCTCACTCTTTCCACCAATGTCCTATTCATTCTCTCGGCCAACCCATTTAGCTGAGGAGTCTTAGGAGGCGTCTTTTGATGTCGAATACCATGATTTCTCGCAATACTCATCAAAAGGTCCAATATACTCTCCTCCATTATCGGTCCCGATGCACTTCAACTTTTACCAGTTTCTCTTTCAACAAGGGCATGAAAGCTGTTTAAACACTTGCAACACTGATCTTTGGACTTCAAGGTATAAACCCAAGTTTTTCTTGAGTGATCATCTATAAACGTCACAAAGTAGGACGCACCTCCAAGTGTTTTTGATTTCATCGGACCACACACATCGAGAATATACTATGTCAAGTACTTACGGTCTTCTTGAAGGTTGGGATGCTTTAAAAGAAACTCTTGTTTGCTTTCCGCTAAACAATGCTCACATCTCTTCAAGGACACATTCTTTACCCAGAAAGATGATTTTTCTTGGCTAGAATCATCAAACCCTTTTTTTTGATATGGTGAGTCTTTTATGCCAAAGCTCAACACTGCATTCTTCATCCCTTTGCATTGATATCACAATCAGTAGTCTTTGCTGCATAAAGTACAATGAAGAACACTTCTCCCCTTTGCTACCACCATTGAGCCTTTAGTAAGCTTCCATGTACCATTCTGGAAGGTATTACAAAACCTTCATCATCTAGCTTACTGTGGAGATTAAATTCATGCGAATATCGGGGATGTGCTTCACATTTTTCAAAATTAAGGTAGTACCATTCTTGGTCTCCAAATGCACATCTCCTATGCCAATTGCTTTTGCTAATCCATCATTACCCATCCTAACACTACCATAATCACGGATGTGTAGGATGTGAAGAATTCCTTCCTAGATGTAGCATGAATTGAGGCACCACTTTGTCAATCACCCAACTGCTCGTTCAGTAGCAAGGTTTACACTATCACCGTCGAATATAACGAAGAATTCTTGGTGGTCTGCGAGAATTCGGTCCGCATCATCATCAATCACTTTTTCTTTACCTTTATCGACTTTACTTTCTCTCTTGATTTTTACGCAATGCTTCTTTATATGACCTTTCAAGCCACAATGGAAACATTCAACATTAGAAAACCGGCCACTTTTGCTCTTGCTTACATCTCTGCTTTTTTGGACATTTGCTCGTACTCCTCCCCTTTCTTTCATTAATAAGTACATCGATCGTGAAGAAGAACCCCGTGACTTTCTTCTCATCTCTTCGTTACATACATCGCTTTTACCAAGTCCATACTTAGTACACCATTGGGTGAGTTCGACAAGGAAGTTCTAAAAGTCTCCCATGAATCGGTAATGAACCAAGAAGCCATAACCCATGTATCTCCTCATCAAACTTGATACTCATTCCAGCTAACTGATTAATAATACCTTGGAATGTATTCAAGTGATCTAACATAGACGTTCCTTCTTGATACTTTAAAGCCATCATTTGCTTAATCAAATACAATTTACTATTATCGGTTTTGGGGCATACAAAGACTCAAGCTTGTTCCACATAGACCGTGCATGATTTTCTTCACCAATATGATTTAGAATATTCTCTTCGACCCAAAGTCTAATCATGCCACATACTTTCCTATGACATATTTCCCATTCTAAATCGGTTTTATCAGTGGCTTCTCTAGTGAAAATACGGGAAGATATAAATCATTGACATATAAAATATCTTCCATTTTTCTTTTCCAAACTTGATAATTTGATCCATTCAAAAGAACCATTCTACCACCACTATGACTCTTTTCCATATTTAACACAAGGCCTCTAAATAAACTCAACCTCGGAGCTCTGATACCACTTGTTGGGAATAAACACTATTCTAATATGGATCAATTATTCCCTCTCTTATGTTCCTAATGAAAAATCAGCAAGCATATAGCATGGTAGAAATATCAAGCACAACACAACGATTTTAACGTGGAAAAACCTCCTCAAGGCGAGGAGTAAAAAACCACGGACCGAAGTCGAATCTCCACTATAATCGATAATGGGCTACAACAAGTTCTCTCTAGTTACAACTAGAGGTATACAACACATAACAACTCAAGATAAACTAATCTTGGCAACAAACAACACAAATCAAGAGAGATAAATAGAAAGATCTCACAAAAATGTGGAACCGAATCGCCACTGGAATCTGGCTGTAGAAACCTCCAAATCCGATCTCCACCGTTCAGATTGAAGACCCTCGTGTCAAGAACACGCTGTCTAAATTTCAGCTCGATCCAACGGTGCAATTGATCGGAAACGCCAAAATACCGAAGCTGGGCAGAAACCTCTTCTCCTCTCTATTTACTTTCTCTCTCTAGGTTGTTTCTCTCTCTGGCTGCTGATTTCCAGCTCTCCCTTTGTTGTGTTCTTGTGTATTTTCTCTACCAAAGTGACAAAATGCACTTTAAAACACTTAGCCCTAATGGGCTTTATTTTATGGGCCTTCACAATGTGAATAAAAACCCAACAAGAGGATGCACTTGTTTACAAATCTGTTGATCCTGTTCTTGTGAAGCAAGATCCAGAAGAGCTAAGAGCATTACTTTTGAAAAGATTGGGTTATCTCGGTGCTGAATTGTGAGTTTCTAACTTAGTTCTTTTCAGTATGTCGTGGATTTACATTGTGCTGACTAACTCTGTCCTAATGCATAGATTTCATTTACCTTATCCAGCCAAAAGCTAATGTGTATCGATCTAGAGGATTTTATCGACTGTTTAATTAGCATAAGTAATGAAAGTTACAGGAAAACTGGTACATTATATTTACAGCCATATGGCCCCACTTACTGCTTAATATCAAATAACTCAACTAGGCCAATAGTGTTTGATTTTAGACCAGATTAATACAAGGGATTGGTGATATCTGCATCGAACTAGAAATGAAAATCATGAGGCGTCATCATATAATTGGGGGGAAAAAATCAAATCAGTTCTTCATATTTATCATTTTCTTCCTTCTCGTGTTGCATTAATACTTTTGATTCGAATTGTCTGTACGTTGTAATGACTAGTTAGTTTCTTTCGATTCCAAACTGGTATTCTAGCTAGTAATTGGTTTGCTTAACTGATGCCATTCTTATGTTGAATTTTGTTTGAGTTTTTGTTAAATGCATGTATCCAAATGTTTATTTCAAATCTGTTAGGATATTCCACGTTGGAAAGTGGGAGAGTCCAACATCAATATAAAAGAGATATGGGTTACTCCCCTCATTGCCAGTTGGTTTTGAGGTGGAACCCCATATTCTCTAATATGATTCCCTTGCTCCGGAACCAGTGTAAGAGATGTTATAATGGAAACTGTAACCATCTTCTATTTCTAACAATTCAATGTTGCTGCAATTTGGTAATTAGCAATAATAAATAACATGATCAGTTCTTTGGTCATAATATTTTCTTTTGCATGTGAGCTATGAACTTTTTCTTGCATTCTTGTTCTTATCTATCCAACAATTCTCTTAAGTTTGATTCACCCTGGTTGCATCACTACTTATTTGTTCTAACAACCTATCTTGAAAATTGGTTTTCTTGAAATGTTTTTCATTTCTACGGTTGAGATTTTCCTTGAACTGTTTGATATCCTACGATTCCTTAGTCGGAATCACACTGTCCGAAACCTAAATGAAATATGTAATCGAGTTTCTGTTTTCATATGAGTTTTTATGCAATTGAGTCTTATATCTAATAGAGTTTAATTAGAGTGCACTATATGAACTTCCATTAAATCCTAGCCCCCATGATTGACATTATGGATTTTCGCTTTCTCCTTAATAAAATGCTTTCTCCTTTGCCCGTAGATTTAGTTAACACACGTTAATGGATCATGTAAATTTTGTGTGTTCTTCTCTGTTTTACGTTAGTGGATTCTTTATTGAAGGTTGATCAGTATCTTGTGTGGAATAGTTGTAATGAGCATGCGTTATATCTGACCACAAGAATTCTAATTTTTCAATACAGGGAGCGCTTTAATGCATTTTTCAGAGATTTGGGAGGGAAGATAATTAGAAAAAGAAAGGTCAGTATTATTGCTTTATTATGCATCTGAACATTGTAGTAATCATTGTTGCACAACAATAACGAGCGAGAGATTCAAATTTTTTATCTCTGGGTAGATGACATATAACTTTAACCAATTGAGCAATAAATCTTTTTTTTTTTTTAGATTACAATTGAGCAATAAATCTACACCTTCGGATTGAGTGTTCATTTTATTTGTTGGAAATTTTCTTTATGAGTGTTCATTTTATTTGTTGGAAATTGTCTTTACTCAAATTCTTTCCTGACGCTAAGTTCAAAGTATTGATGTTCACTTTGTTCTCTTGCAAAAAGAAATTAGTAACCTCACAAGTTTCACAGTTTCATATTTAAACTAATATTCAAGGATTAGTTCTAAGAACACTCACAATTATTGAAAGCGAAAAAAAAAGTCGAAAAAGTGCAAATTGAGTTGAACAATAATATATTATAGGTTAAAATAACATAGGAACTAAAATAGCTAATCATGAACATTTTAAAATCTATGGACTAAACTGAAACAACTATCAAAGTCTATGAAACAAAATTATATATATATATAAAAAATAATAATAATAATTTGAACTAGAATGGTATTTTAATTATGTCTTTCTCTTGGTTTGCATGTGATACATGCCATAGATGCATATTAATCAGTTCTAATAATTTGTTGTATCGGTCTGGCAGAAGATTTCCTTAGAGCGAAGGCTTCGAACTCTCACGCTTAAGGAGACAAAATAG

mRNA sequence

ATGGCAGAAGAACAGGTAGCGAAGAAAGTAACGAAGCAGCGAAGTTGCAGACCGGGATCCGTCACATATATCAGGAAGAAAATGCAGAGCGATCTCAAGGATCTCAGAAATTTGCAGAAAGGTAATGATCGTAACTTCTATCTTCCTCTCCTCCGATTCAGCCTTCACATTCTTGATGCACTTGTTTACAAATCTGTTGATCCTGTTCTTGTGAAGCAAGATCCAGAAGAGCTAAGAGCATTACTTTTGAAAAGATTGGGTTATCTCGGTGCTGAATTGGAGCGCTTTAATGCATTTTTCAGAGATTTGGGAGGGAAGATAATTAGAAAAAGAAAGATTTCCTTAGAGCGAAGGCTTCGAACTCTCACGCTTAAGGAGACAAAATAG

Coding sequence (CDS)

ATGGCAGAAGAACAGGTAGCGAAGAAAGTAACGAAGCAGCGAAGTTGCAGACCGGGATCCGTCACATATATCAGGAAGAAAATGCAGAGCGATCTCAAGGATCTCAGAAATTTGCAGAAAGGTAATGATCGTAACTTCTATCTTCCTCTCCTCCGATTCAGCCTTCACATTCTTGATGCACTTGTTTACAAATCTGTTGATCCTGTTCTTGTGAAGCAAGATCCAGAAGAGCTAAGAGCATTACTTTTGAAAAGATTGGGTTATCTCGGTGCTGAATTGGAGCGCTTTAATGCATTTTTCAGAGATTTGGGAGGGAAGATAATTAGAAAAAGAAAGATTTCCTTAGAGCGAAGGCTTCGAACTCTCACGCTTAAGGAGACAAAATAG

Protein sequence

MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKISLERRLRTLTLKETK
Homology
[Close]
BLAST of Sed0001142 vs. NCBI nr
Match: RXH86418.1 (hypothetical protein DVH24_017471 [Malus domestica])

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04
Identity = 37/128 (28.91%), Postives = 68/128 (53.12%), Query Frame = 0 

Query: 1   MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDA 60
           + +++  K +  +      ++  +++++++   DL  +QKG     Y+ +    L   DA
Sbjct: 36  LKKKKKKKAIAAKSMASSSAIRELQRELEAKANDLSKIQKGKSYT-YIYIYELDLLSEDA 95

Query: 61  LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKISLERRLR 120
            V+K + PVLVKQD  E RA + KR+ Y+ AEL+R +A  +DL  K   K++   + + R
Sbjct: 96  NVFKLIGPVLVKQDLAEARANVRKRIEYISAELKRLDATLQDLEEKQNSKKETIFKLQQR 155

Query: 121 TLTLKETK 129
              L+  K
Sbjct: 156 AQALQAGK 162

[Close]
BLAST of Sed0001142 vs. NCBI nr
Match: XP_031443024.1 (prefoldin subunit 6 [Clupea harengus])

HSP 1 Score: 55.5 bits (132), Expect = 4.0e-04
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LDA  +VYK + PVL
Sbjct: 5   IQKKLQSELEKYQGIQKDVSKSMSARQKLEAQLTENNIVKEELGLLDAQNIVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD +E +A + KRL Y+  E++R+    +D+  K  + R++
Sbjct: 65  VKQDLDEAKATVAKRLEYINGEIQRYETLLKDMERKSEQHREV 107

[Close]
BLAST of Sed0001142 vs. NCBI nr
Match: ACI68967.1 (Prefoldin subunit 6 [Salmo salar])

HSP 1 Score: 55.5 bits (132), Expect = 4.0e-04
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVL
Sbjct: 5   IQKKLQSELEKYQQMQKDVSKSMSARQKLEAQVTENNIVKEELDLLDTQNTVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD EE +A + KRL Y+  E++R+    +D+  K  ++R++
Sbjct: 65  VKQDLEEAKATVAKRLEYINGEIQRYETLLKDMEKKSDQRREV 107

[Close]
BLAST of Sed0001142 vs. NCBI nr
Match: ACO08333.1 (Prefoldin subunit 6 [Oncorhynchus mykiss])

HSP 1 Score: 55.1 bits (131), Expect = 5.3e-04
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVL
Sbjct: 5   IQKKLQSELEKYQQMQKDVSKSMSARQKLEAQVTENNIVKEELDLLDTQNTVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD EE +A ++KRL Y+  E++R+    +D+  K  + R++
Sbjct: 65  VKQDLEEAKATVVKRLEYINGEIQRYETLLKDMEKKSDQHREV 107

[Close]
BLAST of Sed0001142 vs. NCBI nr
Match: KAG7518781.1 (prefoldin subunit 6 [Solea senegalensis])

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-04
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK++++L+    +QK   ++               +++  L ILD+   VYK + PVL
Sbjct: 5   IQKKLKAELEKYTQMQKDVSKSMGARQKLETQLTENNIVKEELDILDSANTVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQDP+E +A + KRL Y+  E+ R+    +DL  K  ++R++
Sbjct: 65  VKQDPDEAKATVAKRLEYINGEIHRYETLLKDLEKKSEQQREL 107

[Close]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match: Q17Q89 (Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDL 104
           VKQ+  E RA + KRL Y+ AE++R+ +  RDL
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDL 97

[Close]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match: Q5TJE6 (Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDL 104
           VKQ+  E RA + KRL Y+ AE++R+ +  RDL
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDL 97

[Close]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match: O15212 (Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDL 104
           VKQ+  E RA + KRL Y+ AE++R+ +  RDL
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDL 97

[Close]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match: Q03958 (Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDL 104
           VKQ+  E RA + KRL Y+ AE++R+ +  RDL
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDL 97

[Close]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match: A8Y197 (Probable prefoldin subunit 6 OS=Caenorhabditis briggsae OX=6238 GN=pfd-6 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-04
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 59  DALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKR 112
           D+ VYK + PVLV+QD EE R+ + KRL ++ +E++R  A   D+  K I +R
Sbjct: 51  DSKVYKLMGPVLVRQDLEEARSTVEKRLEFIESEIKRVEASITDVNKKSIEQR 103

[Close]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match: A0A498ISJ7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017471 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 37/128 (28.91%), Postives = 68/128 (53.12%), Query Frame = 0 

Query: 1   MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDA 60
           + +++  K +  +      ++  +++++++   DL  +QKG     Y+ +    L   DA
Sbjct: 36  LKKKKKKKAIAAKSMASSSAIRELQRELEAKANDLSKIQKGKSYT-YIYIYELDLLSEDA 95

Query: 61  LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKISLERRLR 120
            V+K + PVLVKQD  E RA + KR+ Y+ AEL+R +A  +DL  K   K++   + + R
Sbjct: 96  NVFKLIGPVLVKQDLAEARANVRKRIEYISAELKRLDATLQDLEEKQNSKKETIFKLQQR 155

Query: 121 TLTLKETK 129
              L+  K
Sbjct: 156 AQALQAGK 162

[Close]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match: A0A6P8GUZ8 (prefoldin subunit 6 OS=Clupea harengus OX=7950 GN=pfdn6 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LDA  +VYK + PVL
Sbjct: 5   IQKKLQSELEKYQGIQKDVSKSMSARQKLEAQLTENNIVKEELGLLDAQNIVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD +E +A + KRL Y+  E++R+    +D+  K  + R++
Sbjct: 65  VKQDLDEAKATVAKRLEYINGEIQRYETLLKDMERKSEQHREV 107

[Close]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match: B5XDP7 (Prefoldin subunit 6 OS=Salmo salar OX=8030 GN=PFD6 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVL
Sbjct: 5   IQKKLQSELEKYQQMQKDVSKSMSARQKLEAQVTENNIVKEELDLLDTQNTVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD EE +A + KRL Y+  E++R+    +D+  K  ++R++
Sbjct: 65  VKQDLEEAKATVAKRLEYINGEIQRYETLLKDMEKKSDQRREV 107

[Close]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match: C1BH30 (Prefoldin subunit 6 OS=Oncorhynchus mykiss OX=8022 GN=PFD6 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04
Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVL 83
           I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVL
Sbjct: 5   IQKKLQSELEKYQQMQKDVSKSMSARQKLEAQVTENNIVKEELDLLDTQNTVYKLIGPVL 64

Query: 84  VKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRKI 114
           VKQD EE +A ++KRL Y+  E++R+    +D+  K  + R++
Sbjct: 65  VKQDLEEAKATVVKRLEYINGEIQRYETLLKDMEKKSDQHREV 107

[Close]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match: A0A565AWW3 (Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS3470 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04
Identity = 39/113 (34.51%), Postives = 63/113 (55.75%), Query Frame = 0 

Query: 24  IRKKMQSDLKDLRNLQKG------NDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEE 83
           +++ +++   DL  +QKG      +D+   L LL       DA VYK + PVLVKQD  E
Sbjct: 10  LQRDIENKANDLGKIQKGKYSEESSDKEEELDLLE-----EDANVYKMIGPVLVKQDLAE 69

Query: 84  LRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRK--ISLERRLRTLTLKETK 129
             A + KR+ Y+ AEL+R +A  +D+  K I KR   + L++R++++     K
Sbjct: 70  ANANVRKRIEYISAELKRLDAILQDMEEKQISKRDAIVKLQQRVQSIQAGNAK 117

[Close]
BLAST of Sed0001142 vs. TAIR 10
Match: AT1G29990.1 (prefoldin 6 )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 41/124 (33.06%), Postives = 67/124 (54.03%), Query Frame = 0 

Query: 20  SVTYIRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHIL--DALVYKSV 79
           +V  +++ +++   DL  +QK   +N  L            L+   L +L  DA VYK +
Sbjct: 5   TVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKLI 64

Query: 80  DPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRK--ISLERRLRTLTL 129
            PVLVKQD  E  A + KR+ Y+ AEL+R +A  +D+  K   KR+  + L++RL+T+  
Sbjct: 65  GPVLVKQDLAEANANVRKRIEYISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQTIQA 124

The following BLAST results are available for this feature:
BLAST of Sed0001142 vs. NCBI nr
Match NameE-valueIdentityDescription
RXH86418.12.4e-0428.91hypothetical protein DVH24_017471 [Malus domestica][more]
XP_031443024.14.0e-0432.04prefoldin subunit 6 [Clupea harengus][more]
ACI68967.14.0e-0432.04Prefoldin subunit 6 [Salmo salar][more]
ACO08333.15.3e-0432.04Prefoldin subunit 6 [Oncorhynchus mykiss][more]
KAG7518781.16.9e-0432.04prefoldin subunit 6 [Solea senegalensis][more]
BLAST of Sed0001142 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q17Q893.2e-0433.33Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1[more]
Q5TJE63.2e-0433.33Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1[more]
O152123.2e-0433.33Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1[more]
Q039583.2e-0433.33Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1[more]
A8Y1975.5e-0443.40Probable prefoldin subunit 6 OS=Caenorhabditis briggsae OX=6238 GN=pfd-6 PE=3 SV... [more]
BLAST of Sed0001142 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A498ISJ71.1e-0428.91Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017471 PE=3 SV=1[more]
A0A6P8GUZ82.0e-0432.04prefoldin subunit 6 OS=Clupea harengus OX=7950 GN=pfdn6 PE=3 SV=1[more]
B5XDP72.0e-0432.04Prefoldin subunit 6 OS=Salmo salar OX=8030 GN=PFD6 PE=2 SV=1[more]
C1BH302.5e-0432.04Prefoldin subunit 6 OS=Oncorhynchus mykiss OX=8022 GN=PFD6 PE=2 SV=1[more]
A0A565AWW34.3e-0434.51Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS3470 PE=3 SV=... [more]
BLAST of Sed0001142 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G29990.11.9e-0733.06prefoldin 6 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009053PrefoldinGENE3D1.10.287.370coord: 19..127
e-value: 1.6E-6
score: 29.9
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 59..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001142.1Sed0001142.1mRNA