Sed0001128 (gene) Chayote v1

Overview


Name	Sed0001128
Type	gene
Organism	Sechium edule (Chayote v1)
Description	outer envelope protein 61-like
Location	LG05: 9237732 .. 9239873 (-)
RNA-Seq Expression	Sed0001128
Synteny	Sed0001128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGGAGCAGATGAGTCGTCGCATGGCCCCTGCCGACACCGCCAAACTCGAACAGCAGGTGTCTTTTCATTCGTTTTTTCTTTCAAGATTTTAATTATTGGTTTTGATATGACGATGAAGGGAACTTTTGAATTTCGTGAAGCCTTGCTCAGCTTTACCTTGTTCCCATTTGGATTCTCCACTTTGGAAGTTTCTTGAATCCTTTCATTCCATATGTTCAGGTGATGTCCAATCCAGACTTGGTCAAGATGGGCGATGAATTGAGATATGCTGCTGAAATGTTGAAGACACAGGTAATATTTCTTCTAGGCTTTGATTCAAACACTACTCTGCGAACACATGCCACAAGTTGCTCTTTTTGTTCGATCGAGAAGGCTTGAGATGATACCCCCCGCCTTAATATAATATATATTTATTCTATCTCAATTACAAAAATAGTATTTTTATGATTTCTTACGATCCCTTGTTTGGATGAAGTTTTTTTGTAGAGGAGTTATATAGGGAAAAACTCGTTTGGATGAAAATTTTAGAAGAGGGGTTATATGTTGATTTTTTTTTACTATTTTATTTATATAGATAATTTATATCATTTTTTTTTGTTCATTTATACAACATCTCTCATTTTTATTAATATTTGTCAATTTGTCTCTTCTAATTATCTTGCTTTGAAAATTATATAAATTTCTAAATTATTCAAATAATATTAAAATAGTGTATTTTGTATGTTTTATTTTAGCCTAAAGTATAAAAATATCCATAGATTATGAAGTTTGTATTAAACATACCCCTAAACTTTAATTTTTTTTAAAAGTACCCATGAACTTTGAAAAATGTTTCAAAAATACGTTTGCGGTTAATTTTGGATGGAACTTTTTCCAATAATTGTTTTTAACATTTTTTTCGGTTAAGAAACTTTTTGAAACTTTTTTAAAATTGATGATTTAAAAAAAAAAAAAAAACTTTAACGGTAAGGCATTGATATTTTTCGAAGTTCAAGGATACTTTTGAAACCTTTCAAAGTTTTAGAACATATTTGTCACGAGCTCCATAATTCAATAGTATGTTTTATAATTTAACCTTAATTCTAATTAAATTTTATAAAAAAATAGAAAATTTTTAAATAAAAATAAATAATACTCAATCTTTTTTGAATAATTATATTTTTTATTTTTTAAATAAAACATATAGAATGTCAACAAAAAAATAATTATTATTTTAATTTGAAAATATCATTGAAAACCTGGTTTTGAAAGTCTCTTTTTTGCAATGATTACAATAACTCGTTTGGATTAGTTTTTTGAAGAGGGATTGAAAAACTTATTTTGAAAACCTAGTTGAAAACCTCCGTCCAAACACTCCTTGAACTTTTATTTTATTTTGAACTGAACTACTCCATTAATTTTTATTTTTCTTTCTTGTAAATAAAAAAACTGAATCTTTCTTCCGTAAGCTAAATGTTTTGTTTGAAATTTGTTCAAAAAAAAAAAAAATTGTTTGAAAAATGAAAAATTGACTTGTTCAACTGCCAGTTAATTATCCACAATATGCAATATATTTTATTTTTTTGTATTAGTCCACGCACTTTGCTGCTTAGATCTAAGGATTAGCCCCTTCACATGCAATGTCTAATTAACATGCAATGTTTTCAAGTACACGTGAATAGCTGCTATTACTTATTCCATCTTACAATTATGTGGAACAAGAATTTGTAGTGGATATTTGGATAATATACTTTGAAATAACACGCCTAGGAGCATTTACTATCCTACTTCTATGTCGTGCTGTGATATTTTCCCTTCATCAATGTATTTAATTCTATTGTGATTGCTGTGATCTGTAAATCAATACGTAGGGGAACAAGCTTCACACTCAGGGAAGGTTCAATGATGCCATGGAAAAATATTTGCTTGTGAGTACAGTAAACTCCTTAGATCATATTCCTTCACTCTTTTTAATCTTCAGCTATTGAAATTCTTAGGCTAAGAAAAACCTCAAGGGGATTTCATCTTCCAAAGGAAGAACACTTCTGTTGGCTTGCTCACTCAATTTGATGTCATGTTACTTGAAAACAAAACAGTACCACGACTGCATAAGGGATGGTTCTGAGGTAACACATATTTTCTTTTTTCCTTTCTAA

mRNA sequence

ATGGATCCGGAGCAGATGAGTCGTCGCATGGCCCCTGCCGACACCGCCAAACTCGAACAGCAGGTGATGTCCAATCCAGACTTGGTCAAGATGGGCGATGAATTGAGATATGCTGCTGAAATGTTGAAGACACAGGGGAACAAGCTTCACACTCAGGGAAGGTTCAATGATGCCATGGAAAAATATTTGCTTGCTAAGAAAAACCTCAAGGGGATTTCATCTTCCAAAGGAAGAACACTTCTGTTGGCTTGCTCACTCAATTTGATGTCATGTTACTTGAAAACAAAACAGTACCACGACTGCATAAGGGATGGTTCTGAGGTAACACATATTTTCTTTTTTCCTTTCTAA

Coding sequence (CDS)

ATGGATCCGGAGCAGATGAGTCGTCGCATGGCCCCTGCCGACACCGCCAAACTCGAACAGCAGGTGATGTCCAATCCAGACTTGGTCAAGATGGGCGATGAATTGAGATATGCTGCTGAAATGTTGAAGACACAGGGGAACAAGCTTCACACTCAGGGAAGGTTCAATGATGCCATGGAAAAATATTTGCTTGCTAAGAAAAACCTCAAGGGGATTTCATCTTCCAAAGGAAGAACACTTCTGTTGGCTTGCTCACTCAATTTGATGTCATGTTACTTGAAAACAAAACAGTACCACGACTGCATAAGGGATGGTTCTGAGGTAACACATATTTTCTTTTTTCCTTTCTAA

Protein sequence

MDPEQMSRRMAPADTAKLEQQVMSNPDLVKMGDELRYAAEMLKTQGNKLHTQGRFNDAMEKYLLAKKNLKGISSSKGRTLLLACSLNLMSCYLKTKQYHDCIRDGSEVTHIFFFPF

Homology

[Close]

BLAST of Sed0001128 vs. NCBI nr
Match: XP_022944455.1 (outer envelope protein 61-like [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.9e-33
Identity = 92/167 (55.09%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANTSPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. NCBI nr
Match: XP_022986076.1 (outer envelope protein 61-like [Cucurbita maxima])

HSP 1 Score: 151.4 bits (381), Expect = 4.9e-33
Identity = 91/167 (54.49%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANASPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. NCBI nr
Match: KAG7010220.1 (Outer envelope protein 61 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 91/167 (54.49%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANASPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. NCBI nr
Match: KAG6570326.1 (Outer envelope protein 61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-33
Identity = 91/167 (54.49%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANASPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. NCBI nr
Match: XP_038902154.1 (outer envelope protein 61 [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 8.3e-33
Identity = 90/167 (53.89%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AK++QQVM+NP+L+KM          D+ RY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKIQQQVMANPELMKMASESMKNMRPDDFRYAAEQLKNT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRF+DA+EK
Sbjct: 62  RPEDMAKIGEKMANVSPEEIATMRSRVDAQANYELNAAEMLKTQGNKLHNQGRFSDALEK 121

[Close]

BLAST of Sed0001128 vs. ExPASy Swiss-Prot
Match: B7ZWR6 (Outer envelope protein 61 OS=Arabidopsis thaliana OX=3702 GN=OEP61 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.7e-25
Identity = 73/168 (43.45%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MDPE-------QMSRRMAPADTAKLEQQVMSNPDLVKM----------------GDELRY 60
           MDPE       QMS RM PAD A+++QQ+MSNPDL+ M                 ++L++
Sbjct: 6   MDPEMIRLAQDQMS-RMTPADFARIQQQMMSNPDLMNMATESMKNMRPEDLKQAAEQLKH 65

Query: 61  -------------------------------------AAEMLKTQGNKLHTQGRFNDAME 109
                                                AA+MLK QGN+LH++G F+DA E
Sbjct: 66  TRPEDMAEISEKMAKASPEDIAAMRAHADAQFTYQINAAQMLKKQGNELHSRGNFSDAAE 125

[Close]

BLAST of Sed0001128 vs. ExPASy TrEMBL
Match: A0A6J1FYN9 (outer envelope protein 61-like OS=Cucurbita moschata OX=3662 GN=LOC111448905 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 92/167 (55.09%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANTSPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. ExPASy TrEMBL
Match: A0A6J1JA25 (outer envelope protein 61-like OS=Cucurbita maxima OX=3661 GN=LOC111483935 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 91/167 (54.49%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AKL+QQVM+NP+LVKM          D+LRY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKLQQQVMANPELVKMASDSMKNMRPDDLRYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH QGRFNDA+EK
Sbjct: 62  RPEDMAKIGEKMANASPEEIATMRTCADAQVNHEFNAAEMLKTQGNKLHNQGRFNDALEK 121

[Close]

BLAST of Sed0001128 vs. ExPASy TrEMBL
Match: A0A6J1K8C3 (outer envelope protein 61-like OS=Cucurbita maxima OX=3661 GN=LOC111491572 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.0e-33
Identity = 89/167 (53.29%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AK++QQVM+NPDL+KM          D+L+Y        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKIQQQVMANPDLIKMASESMKGIRPDDLKYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH+QGRF+DA+EK
Sbjct: 62  SPEDMAKLSEKMANASPEELATMHTRADALANYELNAAEMLKTQGNKLHSQGRFSDALEK 121

[Close]

BLAST of Sed0001128 vs. ExPASy TrEMBL
Match: A0A6J1GZU5 (outer envelope protein 61-like OS=Cucurbita moschata OX=3662 GN=LOC111459128 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.0e-33
Identity = 89/167 (53.29%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AK++QQVM+NPDL+KM          D+L+Y        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKIQQQVMANPDLIKMASESMKGMRPDDLKYAAEQLKHT 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH+QGRF+DA+EK
Sbjct: 62  SPEDMAKLSEKMANASPEELATMRTRADALANYELNAAEMLKTQGNKLHSQGRFSDALEK 121

[Close]

BLAST of Sed0001128 vs. ExPASy TrEMBL
Match: A0A5D3DDF5 (Outer envelope protein 61 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00680 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32
Identity = 87/167 (52.10%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MDPEQM------SRRMAPADTAKLEQQVMSNPDLVKMG---------DELRY-------- 60
           MDPE M        RM+PAD AK++QQ+M+NP+L+KM          D+ RY        
Sbjct: 2   MDPELMRLAQEQMSRMSPADFAKIQQQMMANPELMKMASESMKSMRPDDFRYAAEQLKHA 61

Query: 61  ------------------------------------AAEMLKTQGNKLHTQGRFNDAMEK 109
                                               AAEMLKTQGNKLH+QG+FNDA+EK
Sbjct: 62  RPEDMAKIGEKMANASPEEIATMRTRVDAQANYELNAAEMLKTQGNKLHSQGKFNDALEK 121

[Close]

BLAST of Sed0001128 vs. TAIR 10
Match: AT5G21990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-26
Identity = 73/168 (43.45%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MDPE-------QMSRRMAPADTAKLEQQVMSNPDLVKM----------------GDELRY 60
           MDPE       QMS RM PAD A+++QQ+MSNPDL+ M                 ++L++
Sbjct: 6   MDPEMIRLAQDQMS-RMTPADFARIQQQMMSNPDLMNMATESMKNMRPEDLKQAAEQLKH 65

Query: 61  -------------------------------------AAEMLKTQGNKLHTQGRFNDAME 109
                                                AA+MLK QGN+LH++G F+DA E
Sbjct: 66  TRPEDMAEISEKMAKASPEDIAAMRAHADAQFTYQINAAQMLKKQGNELHSRGNFSDAAE 125

The following BLAST results are available for this feature:

BLAST of Sed0001128 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944455.1	2.9e-33	55.09	outer envelope protein 61-like [Cucurbita moschata]	[more]
XP_022986076.1	4.9e-33	54.49	outer envelope protein 61-like [Cucurbita maxima]	[more]
KAG7010220.1	6.4e-33	54.49	Outer envelope protein 61 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570326.1	6.4e-33	54.49	Outer envelope protein 61, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038902154.1	8.3e-33	53.89	outer envelope protein 61 [Benincasa hispida]	[more]

BLAST of Sed0001128 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B7ZWR6	8.7e-25	43.45	Outer envelope protein 61 OS=Arabidopsis thaliana OX=3702 GN=OEP61 PE=1 SV=1	[more]

BLAST of Sed0001128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYN9	1.4e-33	55.09	outer envelope protein 61-like OS=Cucurbita moschata OX=3662 GN=LOC111448905 PE=...	[more]
A0A6J1JA25	2.4e-33	54.49	outer envelope protein 61-like OS=Cucurbita maxima OX=3661 GN=LOC111483935 PE=4 ...	[more]
A0A6J1K8C3	9.0e-33	53.29	outer envelope protein 61-like OS=Cucurbita maxima OX=3661 GN=LOC111491572 PE=4 ...	[more]
A0A6J1GZU5	9.0e-33	53.29	outer envelope protein 61-like OS=Cucurbita moschata OX=3662 GN=LOC111459128 PE=...	[more]
A0A5D3DDF5	1.5e-32	52.10	Outer envelope protein 61 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Sed0001128 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21990.1	6.2e-26	43.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 30..111 e-value: 1.5E-12 score: 49.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 38..108
None	No IPR available	PANTHER	PTHR43811:SF15	OUTER ENVELOPE PROTEIN 61	coord: 2..108
None	No IPR available	PANTHER	PTHR43811	FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001128.1	Sed0001128.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding