Sed0001104 (gene) Chayote v1

Overview


Name	Sed0001104
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	LG08: 30605188 .. 30607134 (+)
RNA-Seq Expression	Sed0001104
Synteny	Sed0001104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATGTGGTCATCAATCCTCCACTTCCACAGCTCTCTCTCTCTCATTGAGAAATATGTTTCTTCTTCACTCATTTCCCGACCATGGCCTTCCCTCTCACTTCCGCCGCCGCCTCCGCCTCCGCCACCGTCTCCGCCGCTCTTCCACCTCCCCACCTCAACCTCCGCCACCGCCCACCCGGAGACATCGCATTGCCCCGCCGCTCCCTTCTCCTTCTCTCTACCTCCCTCTCTCTCTCCGCCGCCGCCGCCTCGGCCTCCCCGCCGCCCGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAGCCGCGACTCCCCCGACGACGGCGGCGACTCCTCCTTACTCTGCTCCGACTCCCTCCTCCTCGGCCGCCTCGTTCTCGGCCTCTACGGCCACATCGTTCCCATCACCGTTTCCAATTTCAAATCCATGTGTACCGGAACCTGCGGCTCTTCCTACAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGCCAAGGCCGCCGCGAAAAAGGCGAAGTCCGGCCGCCGCTGAAACTGCCGAGTAATACCGAAACCGTGAAGTCCGACTCGTTCCTGCTTTCGCATTCGAGAGGCGGCGTTGTTTCGCTTTGCCTTTCGGAGAACGACGACGACGACGATCTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCGAGCTCAATAGCAAGAACATTGTCTTCGGGACTGTTCTTGAAGGTACAAATTCAAAGCTATTTATCTCACAAATTGCTGCTATATCATGAATGTGATCCATATGATTCATTTCTGCTATACAGATGGACGATTTGTTAGGTCTTAGGAACTTAAACCTCACTACAATTGTTTGTTGTAGTTCAACAATTTCTGGGTGGAGTGGAATCGTCTAAATATGTGATGTTAATTGGTGTCTTATACAAAAAACTGTGTTTGGATTGCCAATTCATTAGCTCAATGTCTAGATAGAAAGTTGTCGTAGTACGAGTATGAGATCTGTGGAGGTTTAGTATGATATTAAATAAGATGAGAGCCAAATACTGATTTTTAGGATCGAATGCATGACCATGGATTTGAATTAGATTATAACCAATCAACCAAACGCATACACCACCCACCGTTTCAGTGGGGTTCTTGTTATACATAAGGAGGGTAATTTCTTAGAGGGGAGGATAATTTTAGTGCTACTGTTATATTGTAGTTTCTATTAGATGTATCATAGTTGGGGTCATTATTCAAATTTGACCATATCATAAGAACTAAACTAAAATCATATAATTACATGGTAAAACCAAGTTCAAACTGCACAAAGAACACATATCACATGGAAACTAAGCAAAGGGCTGAGATTAGTAATTTGACAATACCTAGCAATCATCTTGATCTTGGTTTTGGAAAATGCACTGGTTGCTGATGTGTGTATGAAATGTGGGGGTTTCAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGACAATTCAATGATTTTGCTGAGTTTTTAGGGGATGAAAGAGCCCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAACTAAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAAACACAAGGTTCCATTTCTTTGCCTTCTCATCTTTAGTTTTTGTTCATCTTCCGTGAAAATGAAAATTCCAACCCGGCCTCTGTTTTTGTTTTGACCATTATCTGTGTTCATACAATCGGAAATCTAATTTTGATGTCAATACTATCCATGTGTTTATATGCTAAAAGATACAAATTCGTTGTTGTTGGCTCATTGTTTTTGTTCTAAAGTTTATTTATGTCCA

mRNA sequence

GTATGTGGTCATCAATCCTCCACTTCCACAGCTCTCTCTCTCTCATTGAGAAATATGTTTCTTCTTCACTCATTTCCCGACCATGGCCTTCCCTCTCACTTCCGCCGCCGCCTCCGCCTCCGCCACCGTCTCCGCCGCTCTTCCACCTCCCCACCTCAACCTCCGCCACCGCCCACCCGGAGACATCGCATTGCCCCGCCGCTCCCTTCTCCTTCTCTCTACCTCCCTCTCTCTCTCCGCCGCCGCCGCCTCGGCCTCCCCGCCGCCCGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAGCCGCGACTCCCCCGACGACGGCGGCGACTCCTCCTTACTCTGCTCCGACTCCCTCCTCCTCGGCCGCCTCGTTCTCGGCCTCTACGGCCACATCGTTCCCATCACCGTTTCCAATTTCAAATCCATGTGTACCGGAACCTGCGGCTCTTCCTACAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGCCAAGGCCGCCGCGAAAAAGGCGAAGTCCGGCCGCCGCTGAAACTGCCGAGTAATACCGAAACCGTGAAGTCCGACTCGTTCCTGCTTTCGCATTCGAGAGGCGGCGTTGTTTCGCTTTGCCTTTCGGAGAACGACGACGACGACGATCTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCGAGCTCAATAGCAAGAACATTGTCTTCGGGACTGTTCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGACAATTCAATGATTTTGCTGAGTTTTTAGGGGATGAAAGAGCCCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAACTAAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAAACACAAGGTTCCATTTCTTTGCCTTCTCATCTTTAGTTTTTGTTCATCTTCCGTGAAAATGAAAATTCCAACCCGGCCTCTGTTTTTGTTTTGACCATTATCTGTGTTCATACAATCGGAAATCTAATTTTGATGTCAATACTATCCATGTGTTTATATGCTAAAAGATACAAATTCGTTGTTGTTGGCTCATTGTTTTTGTTCTAAAGTTTATTTATGTCCA

Coding sequence (CDS)

ATGGCCTTCCCTCTCACTTCCGCCGCCGCCTCCGCCTCCGCCACCGTCTCCGCCGCTCTTCCACCTCCCCACCTCAACCTCCGCCACCGCCCACCCGGAGACATCGCATTGCCCCGCCGCTCCCTTCTCCTTCTCTCTACCTCCCTCTCTCTCTCCGCCGCCGCCGCCTCGGCCTCCCCGCCGCCCGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAGCCGCGACTCCCCCGACGACGGCGGCGACTCCTCCTTACTCTGCTCCGACTCCCTCCTCCTCGGCCGCCTCGTTCTCGGCCTCTACGGCCACATCGTTCCCATCACCGTTTCCAATTTCAAATCCATGTGTACCGGAACCTGCGGCTCTTCCTACAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGCCAAGGCCGCCGCGAAAAAGGCGAAGTCCGGCCGCCGCTGAAACTGCCGAGTAATACCGAAACCGTGAAGTCCGACTCGTTCCTGCTTTCGCATTCGAGAGGCGGCGTTGTTTCGCTTTGCCTTTCGGAGAACGACGACGACGACGATCTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCGAGCTCAATAGCAAGAACATTGTCTTCGGGACTGTTCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGACAATTCAATGATTTTGCTGAGTTTTTAGGGGATGAAAGAGCCCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAACTAAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAA

Protein sequence

MAFPLTSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAAASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGELKVAKPSLSPTLP

Homology

[Close]

BLAST of Sed0001104 vs. NCBI nr
Match: XP_038889467.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Benincasa hispida])

HSP 1 Score: 526.2 bits (1354), Expect = 1.9e-145
Identity = 267/314 (85.03%), Postives = 288/314 (91.72%), Query Frame = 0


Query: 1   MAFPL--TSAAASASATVSAALPPPHLNLRHR-PPGDIALPRRSLLLLSTSLSLSAAA-- 60
           MAFPL  TS++A+A+ T +  LP  H + R R P GDIALPRRSLL LSTSLSLS A   
Sbjct: 1   MAFPLLFTSSSAAATTTTALLLPAHHHHHRRRLPSGDIALPRRSLLFLSTSLSLSTAVNP 60

Query: 61  --ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYG 120
             + ASPPPDTTITDRVFIDFSICPTNFLP+R+S DDGGD SLLCSDS+LLGRLV+GLYG
Sbjct: 61  PPSPASPPPDTTITDRVFIDFSICPTNFLPNRESTDDGGD-SLLCSDSVLLGRLVIGLYG 120

Query: 121 HIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTE 180
           H+VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KGEVRPPLKLP NTE
Sbjct: 121 HLVPITVTNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLKLPRNTE 180

Query: 181 TVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVF 240
           +VKSDSFLLSHSRGGVVSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+SKNIVF
Sbjct: 181 SVKSDSFLLSHSRGGVVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSKNIVF 240

Query: 241 GTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCG 300
           GTVLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCG
Sbjct: 241 GTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCG 300

Query: 301 ELKVAKPSLSPTLP 308
           ELKVAKP LSPTLP
Sbjct: 301 ELKVAKPLLSPTLP 313

[Close]

BLAST of Sed0001104 vs. NCBI nr
Match: XP_023545629.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.2 bits (1349), Expect = 7.3e-145
Identity = 261/311 (83.92%), Postives = 283/311 (91.00%), Query Frame = 0


Query: 1   MAFPLTSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA----A 60
           MAF L S  +S+++  +A L PPH + R RP GDIALPRRSLLLLSTSLSLS       +
Sbjct: 2   MAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPS 61

Query: 61  SASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHIV 120
            ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLYGH+V
Sbjct: 62  PASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETVK 180
           PITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGTV 240
           SDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+S+NIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLSPTLP 308
           VAKPSLSPTLP
Sbjct: 302 VAKPSLSPTLP 311

[Close]

BLAST of Sed0001104 vs. NCBI nr
Match: KAG7030345.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.3 bits (1344), Expect = 2.8e-144
Identity = 263/312 (84.29%), Postives = 284/312 (91.03%), Query Frame = 0


Query: 1   MAFPLTSAAASASAT-VSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA---- 60
           MAF L S   S+SA+  +A L PPH + R RP GDIALPRRSLLLLSTSLSLS A     
Sbjct: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60

Query: 61  ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHI 120
           + ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLYGH+
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLYGHL 120

Query: 121 VPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETV 180
           VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NTETV
Sbjct: 121 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 180

Query: 181 KSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGT 240
           KSDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+S+NIVFGT
Sbjct: 181 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 240

Query: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGEL 300
           VLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGEL
Sbjct: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 300

Query: 301 KVAKPSLSPTLP 308
           KVAKPSL+PTLP
Sbjct: 301 KVAKPSLTPTLP 311

[Close]

BLAST of Sed0001104 vs. NCBI nr
Match: XP_022946676.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >XP_022946677.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata])

HSP 1 Score: 522.3 bits (1344), Expect = 2.8e-144
Identity = 263/312 (84.29%), Postives = 284/312 (91.03%), Query Frame = 0


Query: 1   MAFPLTSAAASASAT-VSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA---- 60
           MAF L S   S+SA+  +A L PPH + R RP GDIALPRRSLLLLSTSLSLS A     
Sbjct: 2   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHI 120
           + ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLYGH+
Sbjct: 62  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLYGHL 121

Query: 121 VPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETV 180
           VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NTETV
Sbjct: 122 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 181

Query: 181 KSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGT 240
           KSDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+S+NIVFGT
Sbjct: 182 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 241

Query: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGEL 300
           VLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGEL
Sbjct: 242 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 301

Query: 301 KVAKPSLSPTLP 308
           KVAKPSL+PTLP
Sbjct: 302 KVAKPSLTPTLP 312

[Close]

BLAST of Sed0001104 vs. NCBI nr
Match: KAG6599358.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521.5 bits (1342), Expect = 4.8e-144
Identity = 263/315 (83.49%), Postives = 285/315 (90.48%), Query Frame = 0


Query: 1   MAFPL----TSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA- 60
           MAF L    TS++ASA+   +A L PPH + R  P GDIALPRRSLLLLSTSLSLS A  
Sbjct: 2   MAFSLVSTTTSSSASAATAATAVLLPPHHHHRRHPTGDIALPRRSLLLLSTSLSLSTAVD 61

Query: 61  ---ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLY 120
              + ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLY
Sbjct: 62  PPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLY 121

Query: 121 GHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNT 180
           GH+VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NT
Sbjct: 122 GHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNT 181

Query: 181 ETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIV 240
           ETVKSDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+S+NIV
Sbjct: 182 ETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIV 241

Query: 241 FGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDC 300
           FGTVLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDC
Sbjct: 242 FGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDC 301

Query: 301 GELKVAKPSLSPTLP 308
           GELKVAKPSL+PTLP
Sbjct: 302 GELKVAKPSLTPTLP 315

[Close]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot
Match: O65220 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP28 PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-98
Identity = 186/274 (67.88%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 37  LPRRSLLLLSTSLSLSAAAASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSL 96
           L RR+LLL +T  +++    +  P PD TITDRVF+DFS+CPT F   R  P     S+ 
Sbjct: 12  LTRRNLLLSTTIATVTPPPPAKPPSPDITITDRVFLDFSLCPTYF---RSDPSATLSSTT 71

Query: 97  LCSDSLLLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQ-- 156
            CSDS  LGR+VLGLYG  VPITVS FK MCT +  +SYK T VHKIFPGQ+FLAGRQ  
Sbjct: 72  PCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS-STSYKNTPVHKIFPGQYFLAGRQGG 131

Query: 157 GRREKGEVRPPLK-LPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVE 216
           GRR+  EV   L+ LP NT+ V S +FLL H+R GVVSLCLSENDDDDD++LDP+Y NVE
Sbjct: 132 GRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVE 191

Query: 217 FLITTGPGPCPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERA 276
           FLITTGPGP P+L+  NIVFGTVLEGLDVV +ISS PTYKPSE I+QFNDFAEFLGDERA
Sbjct: 192 FLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPTYKPSENIKQFNDFAEFLGDERA 251

Query: 277 QNARTIWNRPLKTVYISDCGELKVAKPSLSPTLP 308
           QNAR++WNRPLKTV+IS CGELKV  PSLSPTLP
Sbjct: 252 QNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16
Identity = 64/197 (32.49%), Postives = 93/197 (47.21%), Query Frame = 0


Query: 103 LLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEV 162
           L GR+V+GLYG  VP TV NF+++CTG  G  YKG+  H++    F + G  G  EKG  
Sbjct: 105 LAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNG 164

Query: 163 RPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGP 222
                +     T K ++F LSH   GV+S+              PN +  +F I T    
Sbjct: 165 TGGKSVYG--RTFKDENFKLSHVGPGVLSMA----------NAGPNTNGSQFFICT--IK 224

Query: 223 CPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNR 282
              L+ +++VFG V+EG++VV  I    T +               GD           R
Sbjct: 225 TSWLDGRHVVFGQVIEGMEVVKLIEEQETDR---------------GD-----------R 258

Query: 283 PLKTVYISDCGELKVAK 300
           P K V I+DCG+L +++
Sbjct: 285 PRKKVVIADCGQLPMSE 258

[Close]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.8e-16
Identity = 62/195 (31.79%), Postives = 90/195 (46.15%), Query Frame = 0


Query: 104 LGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVR 163
           LGR+VLGLYG +VP TV NF+++ TG  G  YK +  H++    F + G    R  G   
Sbjct: 43  LGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIK-DFMIQGGDFTRGDGTGG 102

Query: 164 PPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPC 223
             +      E    ++F L H+  G++S+  +  D +            +F ITT     
Sbjct: 103 KSI----YGERFADENFKLRHTGPGILSMANAGRDTNGS----------QFFITT--VTT 162

Query: 224 PELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRP 283
             L+ +++VFG V+EG+DVV AI +T T                 GD           RP
Sbjct: 163 SWLDGRHVVFGKVIEGMDVVTAIETTKTLP---------------GD-----------RP 194

Query: 284 LKTVYISDCGELKVA 299
              V I+DCGEL V+
Sbjct: 223 ATPVIIADCGELPVS 194

[Close]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot
Match: P0C1H9 (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=cyp8 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.7e-15
Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = 0


Query: 104 LGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVR 163
           LGR+VLGLYG  VP T  NFK + TG  G  YKG+  H++   +F + G       G   
Sbjct: 47  LGRIVLGLYGKTVPKTAENFKQLATGENGYGYKGSTFHRVIK-KFMIQGGDFTNHDGTGG 106

Query: 164 PPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPC 223
             +           ++F L HS  G++S+  +  D +            +F ITT     
Sbjct: 107 KSI----YGNRFADENFKLRHSTPGLLSMANAGRDTNGS----------QFFITT--VVT 166

Query: 224 PELNSKNIVFGTVLEGLDVVAAISSTPT 252
           P L+ K++VFG VLEG+DVV  I +TPT
Sbjct: 167 PWLDGKHVVFGRVLEGMDVVTKIENTPT 177

[Close]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot
Match: Q5B4R3 (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cpr2 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14
Identity = 71/249 (28.51%), Postives = 107/249 (42.97%), Query Frame = 0


Query: 49  LSLSAAAASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLV 108
           ++L  A  +AS P    IT++V+ D                  GD S        LGR+V
Sbjct: 15  VALGLALVNASEPRGPKITNKVYFDI---------------QHGDES--------LGRIV 74

Query: 109 LGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKL 168
           LGLYG  VP T  NF+++ TG  G  Y+G+  H++    F + G    R  G     +  
Sbjct: 75  LGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIK-DFMIQGGDFTRGDGTGGKSI-- 134

Query: 169 PSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNS 228
                  K ++F L H++ G++S+  +  D +            +F ITT     P L+ 
Sbjct: 135 --YGAKFKDENFKLRHTKTGLLSMANAGKDTNGS----------QFFITT--AVTPWLDG 194

Query: 229 KNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVY 288
           K++VFG VLEG D+V  I + P                     + +N     +RPLK V 
Sbjct: 195 KHVVFGEVLEGYDIVDKIQNVP---------------------KGRN-----DRPLKDVK 197

Query: 289 ISDCGELKV 298
           I   GEL++
Sbjct: 255 IVKSGELEM 197

[Close]

BLAST of Sed0001104 vs. ExPASy TrEMBL
Match: A0A0A0LFD1 (PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009340 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.6e-145
Identity = 265/311 (85.21%), Postives = 284/311 (91.32%), Query Frame = 0


Query: 1   MAFPLTSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA----A 60
           MAF L S ++SA+AT + AL PPH N R    GDI LPRRSLLLLSTSLSLS A     +
Sbjct: 1   MAFALLSTSSSAAAT-TVALLPPHHNHRRLRSGDITLPRRSLLLLSTSLSLSTAVNPPPS 60

Query: 61  SASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHIV 120
            ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD SLLCSDS+LLGRLV+GLYGH+V
Sbjct: 61  LASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGD-SLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETVK 180
           P T SNFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KGEVRPPL+LP NTE+VK
Sbjct: 121 PTTASNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGTV 240
           SDSFLLSHSRGGV+SLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCP+L+SKNIVFGTV
Sbjct: 181 SDSFLLSHSRGGVISLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300

Query: 301 VAKPSLSPTLP 308
           VAKPSLSPTLP
Sbjct: 301 VAKPSLSPTLP 309

[Close]

BLAST of Sed0001104 vs. ExPASy TrEMBL
Match: A0A6J1G4B4 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450670 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 263/312 (84.29%), Postives = 284/312 (91.03%), Query Frame = 0


Query: 1   MAFPLTSAAASASAT-VSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA---- 60
           MAF L S   S+SA+  +A L PPH + R RP GDIALPRRSLLLLSTSLSLS A     
Sbjct: 2   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHI 120
           + ASP PDTTITDRVFIDFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLYGH+
Sbjct: 62  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLYGHL 121

Query: 121 VPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETV 180
           VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NTETV
Sbjct: 122 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 181

Query: 181 KSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGT 240
           KSDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+S+NIVFGT
Sbjct: 182 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 241

Query: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGEL 300
           VLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGEL
Sbjct: 242 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 301

Query: 301 KVAKPSLSPTLP 308
           KVAKPSL+PTLP
Sbjct: 302 KVAKPSLTPTLP 312

[Close]

BLAST of Sed0001104 vs. ExPASy TrEMBL
Match: A0A5D3BI73 (Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00920 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.9e-144
Identity = 262/311 (84.24%), Postives = 282/311 (90.68%), Query Frame = 0


Query: 1   MAFPLTSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAA----AA 60
           MAF L S  +S++A ++ AL PPH N R    GD  LPRRSLLLLSTSLSLS A     +
Sbjct: 1   MAFALLSTYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPPS 60

Query: 61  SASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHIV 120
            ASP PDTTITDRVFIDFSICPTNFLP+R+S DDG D SLLCSDS+LLGRLV+GLYGH+V
Sbjct: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSD-SLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETVK 180
           PITVSNFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KGEVRPPL+LP NTE+VK
Sbjct: 121 PITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGTV 240
           SDSFLLSHSRGGVVSLCLSENDDDDDLKLDP+YHNVEFLITTGPGPCP+L+SKNIVFGTV
Sbjct: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYIS CGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELK 300

Query: 301 VAKPSLSPTLP 308
           VAKPSLSPTLP
Sbjct: 301 VAKPSLSPTLP 310

[Close]

BLAST of Sed0001104 vs. ExPASy TrEMBL
Match: A0A1S3C403 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496583 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.9e-144
Identity = 262/311 (84.24%), Postives = 282/311 (90.68%), Query Frame = 0


Query: 1   MAFPLTSAAASASATVSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAA----AA 60
           MAF L S  +S++A ++ AL PPH N R    GD  LPRRSLLLLSTSLSLS A     +
Sbjct: 1   MAFALLSTYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPPS 60

Query: 61  SASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHIV 120
            ASP PDTTITDRVFIDFSICPTNFLP+R+S DDG D SLLCSDS+LLGRLV+GLYGH+V
Sbjct: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSD-SLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETVK 180
           PITVSNFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KGEVRPPL+LP NTE+VK
Sbjct: 121 PITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGTV 240
           SDSFLLSHSRGGVVSLCLSENDDDDDLKLDP+YHNVEFLITTGPGPCP+L+SKNIVFGTV
Sbjct: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYIS CGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELK 300

Query: 301 VAKPSLSPTLP 308
           VAKPSLSPTLP
Sbjct: 301 VAKPSLSPTLP 310

[Close]

BLAST of Sed0001104 vs. ExPASy TrEMBL
Match: A0A6J1KIE5 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493528 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.7e-144
Identity = 261/312 (83.65%), Postives = 285/312 (91.35%), Query Frame = 0


Query: 1   MAFPLTSAAASASAT-VSAALPPPHLNLRHRPPGDIALPRRSLLLLSTSLSLSAAA---- 60
           MAF L S  +S+SA+  +A L PPH + R RP GDIALPRRSLLLLSTSLSLS A     
Sbjct: 2   MAFSLVSTTSSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  ASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSLLCSDSLLLGRLVLGLYGHI 120
           + ASP P+TTITDRVF+DFSICPTNFLP+R+S DDGGD S+LCSDS LLGRLVLGLYGH+
Sbjct: 62  SPASPSPNTTITDRVFLDFSICPTNFLPNRESADDGGD-SILCSDSALLGRLVLGLYGHL 121

Query: 121 VPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEVRPPLKLPSNTETV 180
           VPITV+NFKSMCTG+CGSSYKGTLVHKIFPGQFFLAGRQGRR+KG VRPP +LP NTETV
Sbjct: 122 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 181

Query: 181 KSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPELNSKNIVFGT 240
           KSDSFLLSHSRGG+VSLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCP+L+++NIVFGT
Sbjct: 182 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDNENIVFGT 241

Query: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNRPLKTVYISDCGEL 300
           VLEGLDVVAAISSTPTYKPSERIRQFND A+FLGDERAQNARTIWNRPL+TVYISDCGEL
Sbjct: 242 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 301

Query: 301 KVAKPSLSPTLP 308
           KVAKPSLSPTLP
Sbjct: 302 KVAKPSLSPTLP 312

[Close]

BLAST of Sed0001104 vs. TAIR 10
Match: AT5G35100.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-99
Identity = 186/274 (67.88%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 37  LPRRSLLLLSTSLSLSAAAASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSL 96
           L RR+LLL +T  +++    +  P PD TITDRVF+DFS+CPT F   R  P     S+ 
Sbjct: 12  LTRRNLLLSTTIATVTPPPPAKPPSPDITITDRVFLDFSLCPTYF---RSDPSATLSSTT 71

Query: 97  LCSDSLLLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQ-- 156
            CSDS  LGR+VLGLYG  VPITVS FK MCT +  +SYK T VHKIFPGQ+FLAGRQ  
Sbjct: 72  PCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS-STSYKNTPVHKIFPGQYFLAGRQGG 131

Query: 157 GRREKGEVRPPLK-LPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVE 216
           GRR+  EV   L+ LP NT+ V S +FLL H+R GVVSLCLSENDDDDD++LDP+Y NVE
Sbjct: 132 GRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVE 191

Query: 217 FLITTGPGPCPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERA 276
           FLITTGPGP P+L+  NIVFGTVLEGLDVV +ISS PTYKPSE I+QFNDFAEFLGDERA
Sbjct: 192 FLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPTYKPSENIKQFNDFAEFLGDERA 251

Query: 277 QNARTIWNRPLKTVYISDCGELKVAKPSLSPTLP 308
           QNAR++WNRPLKTV+IS CGELKV  PSLSPTLP
Sbjct: 252 QNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Sed0001104 vs. TAIR 10
Match: AT5G35100.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 306.2 bits (783), Expect = 2.9e-83
Identity = 162/271 (59.78%), Postives = 187/271 (69.00%), Query Frame = 0


Query: 37  LPRRSLLLLSTSLSLSAAAASASPPPDTTITDRVFIDFSICPTNFLPSRDSPDDGGDSSL 96
           L RR+LLL +T  +++    +  P PD TITDRVF+DFS+CPT F   R  P     S+ 
Sbjct: 12  LTRRNLLLSTTIATVTPPPPAKPPSPDITITDRVFLDFSLCPTYF---RSDPSATLSSTT 71

Query: 97  LCSDSLLLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGR 156
            CSDS  LGR+VLGLYG  VPITVS FK MCT +  +SYK T VHKIFPGQ+FLAGRQG 
Sbjct: 72  PCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS-STSYKNTPVHKIFPGQYFLAGRQGG 131

Query: 157 REKGEVRPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLI 216
             +                                   +ENDDDDD++LDP+Y NVEFLI
Sbjct: 132 GRRD---------------------------------TAENDDDDDIRLDPDYRNVEFLI 191

Query: 217 TTGPGPCPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNA 276
           TTGPGP P+L+  NIVFGTVLEGLDVV +ISS PTYKPSE I+QFNDFAEFLGDERAQNA
Sbjct: 192 TTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPTYKPSENIKQFNDFAEFLGDERAQNA 245

Query: 277 RTIWNRPLKTVYISDCGELKVAKPSLSPTLP 308
           R++WNRPLKTV+IS CGELKV  PSLSPTLP
Sbjct: 252 RSLWNRPLKTVFISGCGELKVTNPSLSPTLP 245

[Close]

BLAST of Sed0001104 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 64/197 (32.49%), Postives = 93/197 (47.21%), Query Frame = 0


Query: 103 LLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEV 162
           L GR+V+GLYG  VP TV NF+++CTG  G  YKG+  H++    F + G  G  EKG  
Sbjct: 105 LAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNG 164

Query: 163 RPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGP 222
                +     T K ++F LSH   GV+S+              PN +  +F I T    
Sbjct: 165 TGGKSVYG--RTFKDENFKLSHVGPGVLSMA----------NAGPNTNGSQFFICT--IK 224

Query: 223 CPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNR 282
              L+ +++VFG V+EG++VV  I    T +               GD           R
Sbjct: 225 TSWLDGRHVVFGQVIEGMEVVKLIEEQETDR---------------GD-----------R 258

Query: 283 PLKTVYISDCGELKVAK 300
           P K V I+DCG+L +++
Sbjct: 285 PRKKVVIADCGQLPMSE 258

[Close]

BLAST of Sed0001104 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 64/197 (32.49%), Postives = 93/197 (47.21%), Query Frame = 0


Query: 103 LLGRLVLGLYGHIVPITVSNFKSMCTGTCGSSYKGTLVHKIFPGQFFLAGRQGRREKGEV 162
           L GR+V+GLYG  VP TV NF+++CTG  G  YKG+  H++    F + G  G  EKG  
Sbjct: 101 LAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNG 160

Query: 163 RPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLKLDPNYHNVEFLITTGPGP 222
                +     T K ++F LSH   GV+S+              PN +  +F I T    
Sbjct: 161 TGGKSVYG--RTFKDENFKLSHVGPGVLSMA----------NAGPNTNGSQFFICT--IK 220

Query: 223 CPELNSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDFAEFLGDERAQNARTIWNR 282
              L+ +++VFG V+EG++VV  I    T +               GD           R
Sbjct: 221 TSWLDGRHVVFGQVIEGMEVVKLIEEQETDR---------------GD-----------R 254

Query: 283 PLKTVYISDCGELKVAK 300
           P K V I+DCG+L +++
Sbjct: 281 PRKKVVIADCGQLPMSE 254

[Close]

BLAST of Sed0001104 vs. TAIR 10
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-13
Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 0


Query: 38  PRRSLLLLSTSLSLSAAAASASPP------PDTTITDRVFIDFSICPTNFLPSRDSPDDG 97
           PR  LLL++ ++ L  A  +           D  IT+RVF+D  I               
Sbjct: 11  PRCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDI--------------- 70

Query: 98  GDSSLLCSDSLLLGRLVLGLYGHIVPITVSNFKSMCTGTCGSS-------YKGTLVHKIF 157
                   D   LGR+V+GLYG +VP TV NF+++CTG  G +       YKGT  H+I 
Sbjct: 71  --------DGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 130

Query: 158 PGQFFLAGRQGRREKGEVRPPLKLPSNTETVKSDSFLLSHSRGGVVSLCLSENDDDDDLK 217
            G F + G       G+    +       T   ++F + HS  G+V++            
Sbjct: 131 SG-FVIQGGDIIHGDGKSSDSI----YGGTFPDENFKIQHSHAGMVAMA----------N 190

Query: 218 LDPNYHNVEFLITTGPGPCPELNSKNIVFGTVLEGLDVVAAI---SSTPTYKPSERI 259
             P+ +  +F ITT       L  +++V G V++G+D V AI   + T + KP +++
Sbjct: 191 TGPDSNGSQFFITTVKASW--LEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKV 207

The following BLAST results are available for this feature:

BLAST of Sed0001104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889467.1	1.9e-145	85.03	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Benincasa hispida]	[more]
XP_023545629.1	7.3e-145	83.92	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. ...	[more]
KAG7030345.1	2.8e-144	84.29	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]
XP_022946676.1	2.8e-144	84.29	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >X...	[more]
KAG6599358.1	4.8e-144	83.49	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]

BLAST of Sed0001104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65220	1.4e-98	67.88	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana...	[more]
Q9ASS6	3.0e-16	32.49	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
Q01490	8.8e-16	31.79	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 ...	[more]
P0C1H9	5.7e-15	35.81	Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus delemar (strain RA 99-880 / A...	[more]
Q5B4R3	1.3e-14	28.51	Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans (strain FGSC A4 / A...	[more]

BLAST of Sed0001104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFD1	4.6e-145	85.21	PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A6J1G4B4	1.4e-144	84.29	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata O...	[more]
A0A5D3BI73	3.9e-144	84.24	Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C403	3.9e-144	84.24	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656...	[more]
A0A6J1KIE5	6.7e-144	83.65	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=...	[more]

BLAST of Sed0001104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35100.1	1.0e-99	67.88	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G35100.2	2.9e-83	59.78	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G13120.1	2.1e-17	32.49	cyclophilin 20-2	[more]
AT5G13120.2	2.1e-17	32.49	cyclophilin 20-2	[more]
AT4G34960.1	1.9e-13	28.27	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 140..152 score: 24.27 coord: 111..126 score: 40.84 coord: 228..243 score: 51.16
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 104..256 e-value: 2.0E-18 score: 67.1
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 104..294 score: 20.238064
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 59..266 e-value: 1.1E-27 score: 99.0
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 103..295
IPR044178	Peptidyl-prolyl cis-trans isomerase CYP28-like	PANTHER	PTHR47875	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC	coord: 14..307
None	No IPR available	CDD	cd00317	cyclophilin	coord: 115..259 e-value: 4.33186E-22 score: 88.0896

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001104.1	Sed0001104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity