Sed0001062 (gene) Chayote v1

Overview


Name	Sed0001062
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG12: 31375263 .. 31375796 (-)
RNA-Seq Expression	Sed0001062
Synteny	Sed0001062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCCACAATTCTCCCTAAATTAAATATGGCCTTCTCCACGCCGGAACGTCCTCCGCCACCCACCTCCGGCACGGCGGCCAAGACCTCATCCACCCGCCTGCTCCGGTCCGTCACAGCTCTTGTCGCTCTCTGCGCCAAAAAAGCCGGCCAAGTCACCAATAAGCTCAAGCCGAACCCGGGTCACCCGAGTCCGAGGTCGCCTCTGACTCGGCCGAAGAAGATGCTGAAAACCATCAGCCAATCGGCGATGGGTCTGGTTCACAAGAAAAAGACCGGCCGACCGGAGGAGGAGGAGGAAGTGGAAGAAGAGTGGGGCCATGGTGGAGTATGGCAGAGGGGGATCTTGATGGGTGACAAATGCCAGCCGTTGGATTTTCCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTTGTCAGAAAACCTGATGCCTTCACCGTCCCAAAACAGTGATTTTTTTTTTGTTTTACTTTTACCCGGT

mRNA sequence

ACCCCACAATTCTCCCTAAATTAAATATGGCCTTCTCCACGCCGGAACGTCCTCCGCCACCCACCTCCGGCACGGCGGCCAAGACCTCATCCACCCGCCTGCTCCGGTCCGTCACAGCTCTTGTCGCTCTCTGCGCCAAAAAAGCCGGCCAAGTCACCAATAAGCTCAAGCCGAACCCGGGTCACCCGAGTCCGAGGTCGCCTCTGACTCGGCCGAAGAAGATGCTGAAAACCATCAGCCAATCGGCGATGGGTCTGGTTCACAAGAAAAAGACCGGCCGACCGGAGGAGGAGGAGGAAGTGGAAGAAGAGTGGGGCCATGGTGGAGTATGGCAGAGGGGGATCTTGATGGGTGACAAATGCCAGCCGTTGGATTTTCCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTTGTCAGAAAACCTGATGCCTTCACCGTCCCAAAACAGTGATTTTTTTTTTGTTTTACTTTTACCCGGT

Coding sequence (CDS)

ATGGCCTTCTCCACGCCGGAACGTCCTCCGCCACCCACCTCCGGCACGGCGGCCAAGACCTCATCCACCCGCCTGCTCCGGTCCGTCACAGCTCTTGTCGCTCTCTGCGCCAAAAAAGCCGGCCAAGTCACCAATAAGCTCAAGCCGAACCCGGGTCACCCGAGTCCGAGGTCGCCTCTGACTCGGCCGAAGAAGATGCTGAAAACCATCAGCCAATCGGCGATGGGTCTGGTTCACAAGAAAAAGACCGGCCGACCGGAGGAGGAGGAGGAAGTGGAAGAAGAGTGGGGCCATGGTGGAGTATGGCAGAGGGGGATCTTGATGGGTGACAAATGCCAGCCGTTGGATTTTCCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTTGTCAGAAAACCTGATGCCTTCACCGTCCCAAAACAGTGA

Protein sequence

MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDAFTVPKQ

Homology

[Close]

BLAST of Sed0001062 vs. NCBI nr
Match: TYK28394.1 (hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-56
Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRS 60
           M FSTPE PP P SG +A T ST L RS+TAL ALCAKKA  +T KL  KP+  HPSPRS
Sbjct: 1   MLFSTPEHPPTPGSGRSANTPSTGLRRSLTALAALCAKKAALLTKKLKSKPSQDHPSPRS 60

Query: 61  PLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE-------WGHGGVWQRGILMGDK 120
           PL RPKKMLKTISQSAM LVHKK+TGR EEEEE EEE       WG GGVWQRGILMGDK
Sbjct: 61  PLARPKKMLKTISQSAMNLVHKKRTGRQEEEEEEEEEEVEEEEKWGQGGVWQRGILMGDK 120

Query: 121 CQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK 151
           CQPLDF GAIYYDSNG+KM+EPPLRSPRASPLPGYL+RK
Sbjct: 121 CQPLDFSGAIYYDSNGHKMDEPPLRSPRASPLPGYLLRK 159

[Close]

BLAST of Sed0001062 vs. NCBI nr
Match: KGN63795.1 (hypothetical protein Csa_013677 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56
Identity = 120/158 (75.95%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPS 60
           M FSTP+ PP P SG  AKT ST L  SV AL ALCAKKA  +T KLK      +P HPS
Sbjct: 1   MLFSTPDHPPTPDSGRTAKTPSTGLRGSVAALAALCAKKAALLTKKLKFKPSQDHPSHPS 60

Query: 61  PRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEVEEEWGHGGVWQRGILMGDKC 120
           PRSPL RPKKMLKTISQSAM LVHKK+TGRP   EEEEE EE+WG GGVWQRGILMGDKC
Sbjct: 61  PRSPLARPKKMLKTISQSAMSLVHKKRTGRPVEEEEEEEEEEKWGQGGVWQRGILMGDKC 120

Query: 121 QPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK 151
           QPLDF GAIYYDSNG KM+EPPLRSPRASPLPGYL+RK
Sbjct: 121 QPLDFSGAIYYDSNGQKMDEPPLRSPRASPLPGYLLRK 158

[Close]

BLAST of Sed0001062 vs. NCBI nr
Match: XP_038879173.1 (uncharacterized protein LOC120071149 [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 6.2e-55
Identity = 121/157 (77.07%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPS 60
           M FSTPE P    S TAAKT ST L RSVTAL   CAKKA  VT KLK      +P HPS
Sbjct: 1   MVFSTPETPHTADSDTAAKTPSTGLRRSVTALAVFCAKKAALVTKKLKLKPSHHHPSHPS 60

Query: 61  PRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEE-EVEEEWGHGGVWQRGILMGDKCQP 120
           P+SPL  PKKMLKTISQSAM LV KKKTGR EEEE E EEEWG GGVWQRGILMGDKCQP
Sbjct: 61  PKSPLACPKKMLKTISQSAMSLVQKKKTGRREEEEDEEEEEWGQGGVWQRGILMGDKCQP 120

Query: 121 LDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKP 152
           L+F GAIYYDSNGNKMNEPPLRSPRASPLPGYL+RKP
Sbjct: 121 LEFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKP 157

[Close]

BLAST of Sed0001062 vs. NCBI nr
Match: XP_023531310.1 (uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 108/158 (68.35%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPL 60
           MA STPERPP   S T   +  T LLRSV  LV LCAKKA  VT KLK     PSP + L
Sbjct: 1   MASSTPERPPFTNSCTVPNSLPTGLLRSVKVLVVLCAKKAAHVTKKLK---WKPSPGATL 60

Query: 61  TRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-EWGHGGVWQRGILMGDKCQPL 120
            RPK MLKT+S SAM L  KKKT     RPEEE++ EE EWG  GVWQRGILMGDKCQPL
Sbjct: 61  ARPKNMLKTVSLSAMTLFRKKKTSRRGVRPEEEDDEEEKEWGRVGVWQRGILMGDKCQPL 120

Query: 121 DFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA 154
           DFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Sbjct: 121 DFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155

[Close]

BLAST of Sed0001062 vs. NCBI nr
Match: XP_022973902.1 (uncharacterized protein LOC111472519 [Cucurbita maxima])

HSP 1 Score: 191.4 bits (485), Expect = 5.8e-45
Identity = 107/158 (67.72%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPL 60
           MA  TPERPP   S T   +  T LLRSV  LV LCAKKA  +T KLK     PSP + L
Sbjct: 1   MASPTPERPPFANSCTVPNSLPTGLLRSVKVLVVLCAKKAAHITKKLK---WKPSPGATL 60

Query: 61  TRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-EWGHGGVWQRGILMGDKCQPL 120
            RPK MLKTIS SAM L  KKKT     RPEEE++ EE EWG  GVWQRGILMGDKCQPL
Sbjct: 61  ARPKDMLKTISLSAMTLFRKKKTSRRGVRPEEEDDEEEKEWGRVGVWQRGILMGDKCQPL 120

Query: 121 DFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA 154
           DFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Sbjct: 121 DFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155

[Close]

BLAST of Sed0001062 vs. ExPASy TrEMBL
Match: A0A5D3DXW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00220 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.2e-57
Identity = 121/159 (76.10%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRS 60
           M FSTPE PP P SG +A T ST L RS+TAL ALCAKKA  +T KL  KP+  HPSPRS
Sbjct: 1   MLFSTPEHPPTPGSGRSANTPSTGLRRSLTALAALCAKKAALLTKKLKSKPSQDHPSPRS 60

Query: 61  PLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE-------WGHGGVWQRGILMGDK 120
           PL RPKKMLKTISQSAM LVHKK+TGR EEEEE EEE       WG GGVWQRGILMGDK
Sbjct: 61  PLARPKKMLKTISQSAMNLVHKKRTGRQEEEEEEEEEEVEEEEKWGQGGVWQRGILMGDK 120

Query: 121 CQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK 151
           CQPLDF GAIYYDSNG+KM+EPPLRSPRASPLPGYL+RK
Sbjct: 121 CQPLDFSGAIYYDSNGHKMDEPPLRSPRASPLPGYLLRK 159

[Close]

BLAST of Sed0001062 vs. ExPASy TrEMBL
Match: A0A0A0LPH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015870 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 120/158 (75.95%), Postives = 127/158 (80.38%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPS 60
           M FSTP+ PP P SG  AKT ST L  SV AL ALCAKKA  +T KLK      +P HPS
Sbjct: 1   MLFSTPDHPPTPDSGRTAKTPSTGLRGSVAALAALCAKKAALLTKKLKFKPSQDHPSHPS 60

Query: 61  PRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEVEEEWGHGGVWQRGILMGDKC 120
           PRSPL RPKKMLKTISQSAM LVHKK+TGRP   EEEEE EE+WG GGVWQRGILMGDKC
Sbjct: 61  PRSPLARPKKMLKTISQSAMSLVHKKRTGRPVEEEEEEEEEEKWGQGGVWQRGILMGDKC 120

Query: 121 QPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK 151
           QPLDF GAIYYDSNG KM+EPPLRSPRASPLPGYL+RK
Sbjct: 121 QPLDFSGAIYYDSNGQKMDEPPLRSPRASPLPGYLLRK 158

[Close]

BLAST of Sed0001062 vs. ExPASy TrEMBL
Match: A0A6J1I8S7 (uncharacterized protein LOC111472519 OS=Cucurbita maxima OX=3661 GN=LOC111472519 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.8e-45
Identity = 107/158 (67.72%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPL 60
           MA  TPERPP   S T   +  T LLRSV  LV LCAKKA  +T KLK     PSP + L
Sbjct: 1   MASPTPERPPFANSCTVPNSLPTGLLRSVKVLVVLCAKKAAHITKKLK---WKPSPGATL 60

Query: 61  TRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-EWGHGGVWQRGILMGDKCQPL 120
            RPK MLKTIS SAM L  KKKT     RPEEE++ EE EWG  GVWQRGILMGDKCQPL
Sbjct: 61  ARPKDMLKTISLSAMTLFRKKKTSRRGVRPEEEDDEEEKEWGRVGVWQRGILMGDKCQPL 120

Query: 121 DFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA 154
           DFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Sbjct: 121 DFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155

[Close]

BLAST of Sed0001062 vs. ExPASy TrEMBL
Match: A0A6J1EZ09 (uncharacterized protein LOC111440846 OS=Cucurbita moschata OX=3662 GN=LOC111440846 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-44
Identity = 105/158 (66.46%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPL 60
           MA STPERPP   S T      T LLRSV  LV LCAKKA  VT KLK     PSP + L
Sbjct: 1   MASSTPERPPFANSCTVPNRLPTGLLRSVKVLVVLCAKKAAHVTKKLK---WKPSPGTML 60

Query: 61  TRPKKMLKTISQSAMGLVHKKKTG----RPE-EEEEVEEEWGHGGVWQRGILMGDKCQPL 120
            RPK +LKT+S SAM L  KKKT     RPE +++E E+EWG  GVWQRGILMGDKCQPL
Sbjct: 61  ARPKNVLKTVSLSAMTLFRKKKTSRRGVRPEGDDDEEEKEWGRVGVWQRGILMGDKCQPL 120

Query: 121 DFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA 154
           DFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Sbjct: 121 DFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLRKPEA 155

[Close]

BLAST of Sed0001062 vs. ExPASy TrEMBL
Match: A0A6J1C108 (uncharacterized protein LOC111007369 OS=Momordica charantia OX=3673 GN=LOC111007369 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.8e-42
Identity = 96/150 (64.00%), Postives = 111/150 (74.00%), Query Frame = 0


Query: 1   MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPL 60
           M FST ER P   SG AAK+ ST LL S+TAL       A +++ KL+     PSPRSPL
Sbjct: 1   MGFSTAERVPTADSGAAAKSPSTGLLASITAL-------AARLSRKLRTKQASPSPRSPL 60

Query: 61  TRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGA 120
            RPK MLKTISQSA+ LVHKKK+   ++ +E EEEWGHGGVWQR ILMGDKCQPLDF GA
Sbjct: 61  ARPKHMLKTISQSAITLVHKKKSKPQKDHDEEEEEWGHGGVWQRAILMGDKCQPLDFSGA 120

Query: 121 IYYDSNGNKMNEPPLRSPRASPLPGYLVRK 151
           IYYD+ GNKM++ P RSPRASPLP YL+ K
Sbjct: 121 IYYDNYGNKMDQLPPRSPRASPLPAYLLAK 143

[Close]

BLAST of Sed0001062 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 68/166 (40.96%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 4   STPERPPPPTSGTAAKTSSTRLLRS-VTALVALCAKKAGQVTNKLKP------------- 63
           STPE    P        S  RL  S + +++ LCA+ A +++ KLK              
Sbjct: 4   STPEHNSSP--------SHKRLSVSFLVSMMVLCARHANRLSKKLKLKSKKRTCSGGEGG 63

Query: 64  ------NPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGGVWQ 123
                 N    S  SP  RPK++  T+S  AM +V +K    PEE+    EE    G+WQ
Sbjct: 64  GERFRWNMISSSMSSP--RPKELFTTLSNKAMTMVRRKNP--PEEKATAMEE--EHGLWQ 123

Query: 124 RGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVR 150
           R ILMG KC+PLDF G IYYDSNG  +NE P RSPR +PLP Y  R
Sbjct: 124 REILMGGKCEPLDFSGVIYYDSNGRLLNEVPPRSPRGTPLPSYPTR 155

[Close]

BLAST of Sed0001062 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-15
Identity = 62/178 (34.83%), Postives = 86/178 (48.31%), Query Frame = 0


Query: 7   ERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGH---------PSPR 66
           ER  P    +A K  S   L    +L+ LCA+ A +V+ KLKP              SP+
Sbjct: 2   ERSTPEHVSSAHKRISVSFL---VSLMVLCARHASRVSKKLKPKKTRKQTHLEDYLESPK 61

Query: 67  -----------------------SPL-TRPKKMLKTISQSAMGLVHKKK-------TGRP 126
                                  SP+  RPK++  T+S  AM +V +K        T + 
Sbjct: 62  SNGNGSEDGRGGGRFGWSPARTFSPMRVRPKELYTTLSNKAMTMVGRKNKAYDGGPTKKT 121

Query: 127 EEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLP 145
             E  +EE+    GVWQR ILMG KC+PLD+ G IYYD +G+++ + P RSPRAS +P
Sbjct: 122 AVEMVMEEDEEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRASLVP 176

[Close]

BLAST of Sed0001062 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 99  GGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRS 138
           G +WQ+ ILMG KCQ  DF G I YD++G  +  PP ++
Sbjct: 86  GPLWQKNILMGGKCQLPDFSGVILYDADGQVV--PPAKN 122

[Close]

BLAST of Sed0001062 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 5.3e-04
Identity = 18/36 (50.00%), Postives = 23/36 (63.89%), Query Frame = 0


Query: 101 VWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLR 137
           VWQR ILMG+KC+   F G I YD  G+  + P L+
Sbjct: 116 VWQRPILMGEKCELPRFSGLILYDECGHPRHHPQLQ 151

The following BLAST results are available for this feature:

BLAST of Sed0001062 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28394.1	1.5e-56	76.10	hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa]	[more]
KGN63795.1	2.5e-56	75.95	hypothetical protein Csa_013677 [Cucumis sativus]	[more]
XP_038879173.1	6.2e-55	77.07	uncharacterized protein LOC120071149 [Benincasa hispida]	[more]
XP_023531310.1	1.2e-45	68.35	uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]	[more]
XP_022973902.1	5.8e-45	67.72	uncharacterized protein LOC111472519 [Cucurbita maxima]	[more]

BLAST of Sed0001062 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0001062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXW4	7.2e-57	76.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LPH9	1.2e-56	75.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015870 PE=4 SV=1	[more]
A0A6J1I8S7	2.8e-45	67.72	uncharacterized protein LOC111472519 OS=Cucurbita maxima OX=3661 GN=LOC111472519...	[more]
A0A6J1EZ09	2.4e-44	66.46	uncharacterized protein LOC111440846 OS=Cucurbita moschata OX=3662 GN=LOC1114408...	[more]
A0A6J1C108	3.8e-42	64.00	uncharacterized protein LOC111007369 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Sed0001062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49000.1	4.5e-19	40.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18560.1	3.9e-15	34.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G71740.1	1.8e-04	48.72	unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G14760.1	5.3e-04	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..159
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 16..147
None	No IPR available	PANTHER	PTHR33237:SF26	OS06G0499100 PROTEIN	coord: 16..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001062.1	Sed0001062.1	mRNA