Sed0001021 (gene) Chayote v1

Overview


Name	Sed0001021
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosomal RNA large subunit methyltransferase I isoform X1
Location	LG05: 42456038 .. 42459909 (+)
RNA-Seq Expression	Sed0001021
Synteny	Sed0001021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAGATTCAATCCCGCCTGATAAAGTCGGTCTGCGTTTCTTCTTCTTCGCCAGCCGCCACAACAATCCAAGAAATCGCCTCTGCTTGCCCTAAAGGTCAGTGTATGATTTAAATCCATAGCCATGAAACGAATGTACATTGTCCCAATCATGTTATGCTTGTTACCCATTTGTATTTCGAACGTTTTAGCTTCTGGGTTCGTCGAAATCCATGTCTATCGATGTAATCTGCAGCTTTTCATCGTAATTATGCTTTTGGTAATGGTCATTTTGATGGTGCACTGTTATTGAGTAGCTCTGATGCTACAAACCTGTTGGGAGATGGTTAATTATGGGGAGGATGTGAATTAGGAGAAGAATATGATTGGAGAATGAGTATCAAGGAGAATGATGGTCTCGATTTGGAATAAAGAAAATGATTATGGAGACGAACATTACTTGTGTTTGAAGGGTAGATAATAAAATAGTTTCAGAGGGGTGGCGTGGTGGTTGAAGGCTTAGACTTCAAGGTTCTAGGTTCGAGATTCACCTGTAACATTATTTTTTAGACATCTCCCGTGTCTCCATTACTTCGATGTCTCCTTGCTCCTGGCCTTAGGACGGACGTGGTTATCTCGGTTATAATGGTGCAAAGTTTTGATTTCTCAGTTAAAAAAAGAATAATGTAGAGAATAAAGCAGTTGTTGTATATGAAATTTGGTTAAGTTAGGATAAATAATAGTTATGGATAGAAAAAAAAAAGTTACGAAAAAATGACATAATGGAAAGAATGGTTCTCGATGGCTCAAACACACAGAAGCATATTCCTTCTATTTCTTTAAAAAATGAAGCCTTTCATTGATATATGAAATTGAATCATATTCCTTCCTGTTCTTGCCATTTGACCTCTTTGCCTCAAACCCCTCCTTAATGTCGATCATGTCAAACGATAGGTTTTGTTCTGTTAGATAACAAAATTGGGTTGAAATTGTGTTGATTTTGGGGTTAGTAGGTTTGGCAAAAGTTGTACTGAAAAAGGGCAAGGCACAGCTTTTTAAAGCTGGAAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTGCTGGTAGCTGATGGCACTGAAAAACCTATAGGGTGGGGCTTGTATAATTCTGCTTCCATGTTCTCTGTCAGATTGATGCAGTTGGAAGAGGAGGCAGCTAGGTACTGAACTGGCCAATGTTTTGAACTCTGTGCTTTAGATCACCTTCATTATCTGGTGCTAAGTTTCAAATTTATGCAATGCAGAGATCCTTCTTGCACATTGGACATGGAGAAACTGATTGAAACAAGGATTCATACTGCTAGACAATTACGAAAGAGCTTGGGACTTCCATCGGCCAGTACGAATGCGTATCGCCTTGTTAATAGTGAAGGAGACAGGTATTGGCCTTGAGTATTATGTTCATGTTTTTGTACACTATGCATCCCATATTTGTAAAATTGACTTAATTTTATCACCATCGTGCATCGAGCTTCATTCTTCAACTTCAACTATTTTTTATATCCGTGAGTATCTGGATCAGCTTATGCACACCTCGACTATTTTTACGGGACAAATGGGATCTACAATATTTGGTTGCTAGAAAAATAATTCATAAATAAGTGGTTGAACTCATAACCTCTTAGTTCTCTAAGATCCTCTTGACCAATACACCAACTATGATAATTTCTCAACTCCAAACTGTTAGTCTGTAAATTTTTCCACCAACTGTAAATTCTCCCCAAGGCCCAAACTTTCTTCTCTCTCTTGTGTTGCTTCAAATGTAATTTGATTGCACATTGGAACATGATCCAAATGTGTTTTTTTGTATCTTATTGCAGATTATCAGGACTGATCATTGACGTGTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAACCTGAAATTGAGGATTGTATCCGTGAAATGGACGAAATCAATCATGTGAAATGGAGGCCGTCGGTGGAAATCTTGAAAGAAGAAGGGATTGATATGTCTGAATTGAAGGATACAAATCCATCTACTTGTCCTGGAAGAGCAAAGGTAGTAAACCACTGCAACACCTGTCACTTGTACTGTACTATTTGAAGATATGTTCTTAAATATTCTTTTATGTGGCAAAACATAAAAGAAAGGAAAACTTACGAGATTAGTCAAATTCATAAAATAATTACAAATATAATCACTTTAAAAAAAAATTACTAACCATAGTCATAGACTCATAGGTATTAATAATAATACTGTATTTTAATATTACATACTAATGTATTAATGATAAATAATATTGTATTAATGAGTATTAATAATACAATATTAAAATGTATTAATGACTATGGATGCAAATATGTTGAAATTTTACTACATTGGTAATTATTTTGTTAGAATAGTTCATCCATTACAACTTCCCTAAAAGAAATCATTTTTTGGATTTTTCTGCAGTTGCGTTAGACATTTCTCTTGGTAAACAAAAATAATCAGCTTGATGCCATCAATAGTCATTTCCATGAAGGTGGCTCTTATGTGTAATGAATCACGTTTTAATGCTTGATGTAATATGAATAAAAACAACATAGAGTTCATTCTTCACCTCCAATTCCGTGAACGTGTATTTATCATGTTTATGGTCACTAATGGTTAAACATGTCGACTTCTTTTGATCTTACATGCTTTGATGATAAATCATCATTAATGAGTAAACCATCTTGAATTGGCATAGTGGTCAAGAGGGTCATATATAGGTTCAATTCATAGTGATCACTTAACTAAGAATTAGTTTCTTACGGATTTCTTTGACAACCAAATATTGTAGTCTCAGACAGCATTATGTGAGAATAGTCAAGGTGCACATAAGCACAAACCGGTCACTCACATATATTAAAAACAAAAATTATTAGGAGTAAATTTCAAAGATTTCTATATCTCCTCACTGAAATGTATTCTAGTGGTGGAAAATCTTGGTAACAAAAGAAGCAATCAGGCCATCATGTTAATGTAGAAGATACTTCTAAACTAATCTAATGATACTGTTCCAACTTCATGAGCAAATGCGTTCAACCAAGTTACCGACTAATCACATGAGATATTGATCATGCCTTATTCTGATAGGTAACGGAGAATGGAATTTTTTATGCCATTTCACTTGAAGGCCAGAAAACAGGGTTCTATGCTGATCAACGTGAAAATCGACATTTTATCTCGACTATTTCGGAGGGTCAGAAAGTTCTTGATCTTTGCTGCTACAGTGGTGGGTTTTCTCTAAATGCAGTACGTGGTAGAGCTACTTATGTCACTGGTATACATTTTATCTTCTGTGTATAATTGGAACTTGTTCACATTCGGGTATCATTGTCTTTTTAGTAAGGCTTTTTAGATCAAATGTTTAGAAGAGTATGCTGTGGAAAAGATACTTAAGATATACATGACTTTTCTTTATATCTTGAGTGTCCGGACCAGTTTGCGTGCATCTCAACTATTTTCACAGGATATACCATCTATACCTATAATATTTGGATGTTAAGAAAATTTGAAGGAAATTATTTTCTATGTAGGTTACCTACTTGAATTGGTGTTATCGCCTTTTGGAACCCCAATACTCTCTTTGACCACTAAACCCACGGGTTGGTCTACTTCGGATTTTTACTTAGAAATTCAAACTTTTGTGTCTTGTGTGTTGCTATCAGTTATCACATTAGCTCACTATCAGCAGAAGTGGCATTAATGCTTGTGAGAAGAGGATGGGAAATAATCAGGACCCTCTAACCTGAAGTACAATATTAGTATTAACTTCTCTTACAAGTTTGCTAATTACCAG

mRNA sequence

ATGCAGCAGATTCAATCCCGCCTGATAAAGTCGGTCTGCGTTTCTTCTTCTTCGCCAGCCGCCACAACAATCCAAGAAATCGCCTCTGCTTGCCCTAAAGGTTTGGCAAAAGTTGTACTGAAAAAGGGCAAGGCACAGCTTTTTAAAGCTGGAAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTGCTGGTAGCTGATGGCACTGAAAAACCTATAGGGTGGGGCTTGTATAATTCTGCTTCCATGTTCTCTGTCAGATTGATGCAGTTGGAAGAGGAGGCAGCTAGAGATCCTTCTTGCACATTGGACATGGAGAAACTGATTGAAACAAGGATTCATACTGCTAGACAATTACGAAAGAGCTTGGGACTTCCATCGGCCAGTACGAATGCGTATCGCCTTGTTAATAGTGAAGGAGACAGATTATCAGGACTGATCATTGACGTGTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAACCTGAAATTGAGGATTGTATCCGTGAAATGGACGAAATCAATCATGTGAAATGGAGGCCGTCGGTGGAAATCTTGAAAGAAGAAGGGATTGATATGTCTGAATTGAAGGATACAAATCCATCTACTTGTCCTGGAAGAGCAAAGGTAACGGAGAATGGAATTTTTTATGCCATTTCACTTGAAGGCCAGAAAACAGGGTTCTATGCTGATCAACGTGAAAATCGACATTTTATCTCGACTATTTCGGAGGGTCAGAAAGTTCTTGATCTTTGCTGCTACAGTGGTGGGTTTTCTCTAAATGCAGTACGTGGTAGAGCTACTTATGTCACTGGTTACCTACTTGAATTGGTGTTATCGCCTTTTGGAACCCCAATACTCTCTTTGACCACTAAACCCACGGGTTGGTCTACTTCGGATTTTTACTTAGAAATTCAAACTTTTGTGTCTTGTGTGTTGCTATCAGTTATCACATTAGCTCACTATCAGCAGAAGTGGCATTAATGCTTGTGAGAAGAGGATGGGAAATAATCAGGACCCTCTAACCTGAAGTACAATATTAGTATTAACTTCTCTTACAAGTTTGCTAATTACCAG

Coding sequence (CDS)

ATGCAGCAGATTCAATCCCGCCTGATAAAGTCGGTCTGCGTTTCTTCTTCTTCGCCAGCCGCCACAACAATCCAAGAAATCGCCTCTGCTTGCCCTAAAGGTTTGGCAAAAGTTGTACTGAAAAAGGGCAAGGCACAGCTTTTTAAAGCTGGAAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGGCCACCACCAAAAACTGGAGATGTTGTGCTGGTAGCTGATGGCACTGAAAAACCTATAGGGTGGGGCTTGTATAATTCTGCTTCCATGTTCTCTGTCAGATTGATGCAGTTGGAAGAGGAGGCAGCTAGAGATCCTTCTTGCACATTGGACATGGAGAAACTGATTGAAACAAGGATTCATACTGCTAGACAATTACGAAAGAGCTTGGGACTTCCATCGGCCAGTACGAATGCGTATCGCCTTGTTAATAGTGAAGGAGACAGATTATCAGGACTGATCATTGACGTGTTTGGAGATTTAGCAGTGGTAGCATCATCTGCTGCTTGGGTGGAGAAGTACAAACCTGAAATTGAGGATTGTATCCGTGAAATGGACGAAATCAATCATGTGAAATGGAGGCCGTCGGTGGAAATCTTGAAAGAAGAAGGGATTGATATGTCTGAATTGAAGGATACAAATCCATCTACTTGTCCTGGAAGAGCAAAGGTAACGGAGAATGGAATTTTTTATGCCATTTCACTTGAAGGCCAGAAAACAGGGTTCTATGCTGATCAACGTGAAAATCGACATTTTATCTCGACTATTTCGGAGGGTCAGAAAGTTCTTGATCTTTGCTGCTACAGTGGTGGGTTTTCTCTAAATGCAGTACGTGGTAGAGCTACTTATGTCACTGGTTACCTACTTGAATTGGTGTTATCGCCTTTTGGAACCCCAATACTCTCTTTGACCACTAAACCCACGGGTTGGTCTACTTCGGATTTTTACTTAGAAATTCAAACTTTTGTGTCTTGTGTGTTGCTATCAGTTATCACATTAGCTCACTATCAGCAGAAGTGGCATTAA

Protein sequence

MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTGYLLELVLSPFGTPILSLTTKPTGWSTSDFYLEIQTFVSCVLLSVITLAHYQQKWH

Homology

[Close]

BLAST of Sed0001021 vs. NCBI nr
Match: XP_038901472.1 (ribosomal RNA large subunit methyltransferase I isoform X2 [Benincasa hispida])

HSP 1 Score: 517.7 bits (1332), Expect = 7.7e-143
Identity = 260/291 (89.35%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQ +QSRL+KS+ + SS PAA+TIQEIAS CPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MQHLQSRLLKSLAI-SSPPAASTIQEIASTCPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAARD SCTL+MEK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDSSCTLNMEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRI+TAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRINTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+RE+DEINHVKWRPS++ILKEEGID SELKDTNPSTCP R KVTEN IFYAISL
Sbjct: 181 AEIEDCVREIDEINHVKWRPSMDILKEEGIDASELKDTNPSTCPERTKVTENDIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAIRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. NCBI nr
Match: XP_031743329.1 (uncharacterized protein LOC101215914 isoform X3 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-142
Identity = 260/291 (89.35%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQ +QSRLIKS+ + SSSPAA+TIQEIASACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MQLLQSRLIKSLSI-SSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETR+HTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELKDT+PSTCP R KV EN IFYAISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. NCBI nr
Match: XP_022985853.1 (uncharacterized protein LOC111483780 [Cucurbita maxima])

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-142
Identity = 261/291 (89.69%), Postives = 274/291 (94.16%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQQ+Q+RL+KS+ + SSSPAA+TIQEIAS+ PKGL+KVVLKKGK QLFK GSPMVYSGAV
Sbjct: 1   MQQLQARLLKSLSI-SSSPAASTIQEIASSRPKGLSKVVLKKGKTQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADG EKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTLDM+KL
Sbjct: 61  DRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLDMQKL 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIH AR+LRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHIARELRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R +DEINHVKWRPSVEILKEEGID+SELKDTNPS CP R KVTENGIFYAISL
Sbjct: 181 AEIEDCVRGIDEINHVKWRPSVEILKEEGIDVSELKDTNPSNCPERTKVTENGIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAARGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. NCBI nr
Match: XP_004139905.1 (uncharacterized protein LOC101215914 isoform X1 [Cucumis sativus] >KGN46803.2 hypothetical protein Csa_020727 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-142
Identity = 260/291 (89.35%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQ +QSRLIKS+ + SSSPAA+TIQEIASACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MQLLQSRLIKSLSI-SSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETR+HTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELKDT+PSTCP R KV EN IFYAISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. NCBI nr
Match: XP_011656973.1 (uncharacterized protein LOC101215914 isoform X2 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-142
Identity = 260/291 (89.35%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQ +QSRLIKS+ + SSSPAA+TIQEIASACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MQLLQSRLIKSLSI-SSSPAASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETR+HTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELKDT+PSTCP R KV EN IFYAISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot
Match: B4RRY8 (Ribosomal RNA large subunit methyltransferase I OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rlmI PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24
Identity = 85/257 (33.07%), Postives = 135/257 (52.53%), Query Frame = 0


Query: 36  AKVVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASM 95
           A+V+L+  + +  +   P V+  AV  + GR   + GD V V D     +G G Y+  S 
Sbjct: 3   AQVILQPSRDKSLRRKHPWVFESAVAELKGR--ARIGDTVDVFDDEGDWLGRGAYSPHSK 62

Query: 96  FSVRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRL 155
             VR+   +++ + D    L        R+ TA  LRK L  P+  TNA+R + SE D L
Sbjct: 63  IRVRMWTFKKDESIDNGFFL-------RRLETALALRKRLFDPN-KTNAFRWIASESDGL 122

Query: 156 SGLIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGID-MSE 215
            G+ ID++ ++AVV   +A  EK++ +I   I ++    HV  R  V++ K+EG++ ++ 
Sbjct: 123 PGVTIDLYDNVAVVQLLSAGGEKHRDKIVWAITKLMPDVHVYERSDVDVRKKEGLEPVTG 182

Query: 216 LKDTNPSTCPGRAKVTENGIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCY 275
           +    P   P +  V ENGI   + +E G KTGFY DQR++R   +  ++   VL+   Y
Sbjct: 183 VLHGQP---PTQVTVKENGINIVVDIESGHKTGFYLDQRDSRAAAAHYAKDADVLNCFSY 242

Query: 276 SGGFSLNAVRGRATYVT 291
           +G FS  A+ G A  VT
Sbjct: 243 TGTFSCYALSGGAKSVT 246

[Close]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot
Match: B2VDG5 (Ribosomal RNA large subunit methyltransferase I OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=rlmI PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 71/257 (27.63%), Postives = 136/257 (52.92%), Query Frame = 0


Query: 37  KVVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMF 96
           +++L KG+ +      P V+SGAV R+ G+  P  G+ + V D   K +    ++ +S  
Sbjct: 4   RLILAKGREKSLLRRHPWVFSGAVARLEGKAQP--GETIDVCDSQGKWLARAAWSPSSQI 63

Query: 97  SVRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLS 156
             R+   +++       ++D++  +  R++ A+QLR  L L   + ++YRL+  E D L 
Sbjct: 64  RARVWSWQQDE------SIDIDFFVR-RLNAAQQLRDWLALRD-NLDSYRLIAGESDGLP 123

Query: 157 GLIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGIDMSE-- 216
           G+ ID FG+  V+   +A  E  +  +   ++       +  R  V + K+EG+++++  
Sbjct: 124 GITIDRFGNFLVLQLLSAGAEYQRAALITALQRCYPDCAIYDRSDVSVRKKEGLELTQGV 183

Query: 217 -LKDTNPSTCPGRAKVTENGIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCC 276
            L D  P   P    +TE+G+   + ++ G KTG+Y DQR++R      ++G++VL+   
Sbjct: 184 VLGDAPPPLLP----ITEHGMKLLVDIQTGHKTGYYLDQRDSRQATRRYAQGRRVLNCFS 243

Query: 277 YSGGFSLNAVRGRATYV 290
           Y+GGF+++A+ G    V
Sbjct: 244 YTGGFAVSALMGNCKEV 246

[Close]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot
Match: Q3IKJ0 (Ribosomal RNA large subunit methyltransferase I OS=Pseudoalteromonas translucida (strain TAC 125) OX=326442 GN=rlmI PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-20
Identity = 73/255 (28.63%), Postives = 121/255 (47.45%), Query Frame = 0


Query: 38  VVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFS 97
           V L+ G+ +  K   P ++S A+ +I G+  P  GD V + D   K +    Y+  S   
Sbjct: 5   VYLQAGRDKSLKRKHPWLFSKAIKKIKGK--PGLGDTVTIHDSEGKFLATAAYSPHSQIR 64

Query: 98  VRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSG 157
            R+   +E+   D       +   E R+  A + R  + +       +RL  +E D L G
Sbjct: 65  ARVWSFDEKEVID-------QHFFERRLRRALEARSQV-IEEGGLTGFRLCAAESDFLPG 124

Query: 158 LIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGID-MSELK 217
           + ID F ++ V    +A  E++K EI   +  +     +  R  VE+  +EG++ +    
Sbjct: 125 VTIDKFDNVLVCQLLSAGAERHKGEIVGALMAIFPGMSIYERSDVEVRTKEGLEPIKGAL 184

Query: 218 DTNPSTCPGRAKVTENGIFYAIS-LEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSG 277
             N  T P    + ENG    +  ++G KTGFY DQR++R  +   S+ + VL+   Y+G
Sbjct: 185 WGNEPTAP--VLIAENGFKIEVDIIDGHKTGFYLDQRDSRAALERFSKDKTVLNCFSYTG 244

Query: 278 GFSLNAVRGRATYVT 291
            FSL A+RG   +VT
Sbjct: 245 TFSLYALRGGCKHVT 247

[Close]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot
Match: A8AIB0 (Ribosomal RNA large subunit methyltransferase I OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=rlmI PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-20
Identity = 69/249 (27.71%), Postives = 123/249 (49.40%), Query Frame = 0


Query: 37  KVVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMF 96
           ++VL KG+ +      P V+SGAV R+ G+     G+ + + D   K +  G Y+ AS  
Sbjct: 4   RLVLAKGREKSLLRRHPWVFSGAVARMEGK--ASLGETIDIVDHQGKWLARGAYSPASQI 63

Query: 97  SVRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLS 156
             R+   ++  + D +           R+H A+Q R  L       ++YRL+  E D L 
Sbjct: 64  RARVWTFDQAESIDIA-------FFTRRLHQAQQWRDWLA-KKDGLDSYRLIAGESDGLP 123

Query: 157 GLIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELK 216
           G+ ID FG+  V+   +A  E  +  +   ++       +  R  V + K+EG+++++  
Sbjct: 124 GITIDRFGNFLVLQLLSAGAEYQRAALISALQTQYPECAIYDRSDVAVRKKEGMELTQGP 183

Query: 217 DTNPSTCPGRAKVTENGIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCYSG 276
            T     P    + E+G+   + ++ G KTG+Y DQR++R       E Q+VL+   Y+G
Sbjct: 184 VTG-ELPPALLPIEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTG 241

Query: 277 GFSLNAVRG 285
           GF+++A+ G
Sbjct: 244 GFAVSALMG 241

[Close]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot
Match: B1LJ30 (Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=rlmI PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.9e-20
Identity = 70/254 (27.56%), Postives = 127/254 (50.00%), Query Frame = 0


Query: 37  KVVLKKGKAQLFKAGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMF 96
           ++VL KG+ +      P ++SGAV R+ G+     G+ + + D   K +  G Y+ AS  
Sbjct: 4   RLVLAKGREKSLLRRHPWIFSGAVARMEGK--ASLGETIDIVDHQGKWLARGAYSPASQI 63

Query: 97  SVRLMQLEEEAARDPSCTLDMEKLIETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLS 156
             R+         DPS ++D+      R+  A++ R  L       N+YRL+  E D L 
Sbjct: 64  RARVWTF------DPSESIDI-AFFTRRLQQAQKWRDWLA-QKDGLNSYRLIAGESDGLP 123

Query: 157 GLIIDVFGDLAVVASSAAWVEKYKPEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELK 216
           G+ ID FG+  V+   +A  E  +  +   ++ +     +  R  V + K+EG+++++  
Sbjct: 124 GITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGP 183

Query: 217 DTNPSTCPGRAKVTENGIFYAISLE-GQKTGFYADQRENRHFISTISEGQKVLDLCCYSG 276
            T     P    + E+G+   + ++ G KTG+Y DQR++R       E ++VL+   Y+G
Sbjct: 184 VTG-ELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTG 243

Query: 277 GFSLNAVRGRATYV 290
           GF+++A+ G  + V
Sbjct: 244 GFAVSALMGGCSQV 246

[Close]

BLAST of Sed0001021 vs. ExPASy TrEMBL
Match: A0A6J1JEU3 (uncharacterized protein LOC111483780 OS=Cucurbita maxima OX=3661 GN=LOC111483780 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.9e-143
Identity = 261/291 (89.69%), Postives = 274/291 (94.16%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQQ+Q+RL+KS+ + SSSPAA+TIQEIAS+ PKGL+KVVLKKGK QLFK GSPMVYSGAV
Sbjct: 1   MQQLQARLLKSLSI-SSSPAASTIQEIASSRPKGLSKVVLKKGKTQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADG EKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTLDM+KL
Sbjct: 61  DRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLDMQKL 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIH AR+LRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHIARELRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R +DEINHVKWRPSVEILKEEGID+SELKDTNPS CP R KVTENGIFYAISL
Sbjct: 181 AEIEDCVRGIDEINHVKWRPSVEILKEEGIDVSELKDTNPSNCPERTKVTENGIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAARGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. ExPASy TrEMBL
Match: A0A6J1FRU8 (uncharacterized protein LOC111448241 OS=Cucurbita moschata OX=3662 GN=LOC111448241 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.1e-142
Identity = 261/291 (89.69%), Postives = 274/291 (94.16%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           MQQ+Q+RL+KS+ + SSSPAA+TIQEIASA PKGL+KVVLKKGK QLFK GSPMVYSGA+
Sbjct: 1   MQQLQARLLKSLSI-SSSPAASTIQEIASARPKGLSKVVLKKGKTQLFKDGSPMVYSGAI 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADG EKPIGWGLYNS SMFSVRLMQLEEEAARDPSCTLDM+KL
Sbjct: 61  DRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLDMQKL 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIHTAR+LRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHTARELRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R +DEINHVKWRPSVEILKEEGID+SELKDTNPS C  R KVTENGIFYAISL
Sbjct: 181 AEIEDCVRGIDEINHVKWRPSVEILKEEGIDVSELKDTNPSICLERTKVTENGIFYAISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAARGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. ExPASy TrEMBL
Match: A0A1S3C2Z6 (ribosomal RNA large subunit methyltransferase I isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496280 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 257/291 (88.32%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           M  +QSRLIKS+ + SSSPAA+TIQEIA+ACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MLHLQSRLIKSLSI-SSSPAASTIQEIATACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAA DPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAASDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIHTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELK+T+PSTCP R KV ENGIFY ISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKETSPSTCPERTKVKENGIFYTISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. ExPASy TrEMBL
Match: A0A1S3C2G7 (ribosomal RNA large subunit methyltransferase I isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496280 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 257/291 (88.32%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           M  +QSRLIKS+ + SSSPAA+TIQEIA+ACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MLHLQSRLIKSLSI-SSSPAASTIQEIATACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAA DPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAASDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIHTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELK+T+PSTCP R KV ENGIFY ISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKETSPSTCPERTKVKENGIFYTISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. ExPASy TrEMBL
Match: A0A1S3C3K0 (ribosomal RNA large subunit methyltransferase I isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496280 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.1e-141
Identity = 257/291 (88.32%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   MQQIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAV 60
           M  +QSRLIKS+ + SSSPAA+TIQEIA+ACPKGLAKVVLKKGKAQLFK GSPMVYSGAV
Sbjct: 1   MLHLQSRLIKSLSI-SSSPAASTIQEIATACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 60

Query: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKL 120
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNS SMFSVRLMQLEEEAA DPSCTL++EK+
Sbjct: 61  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAASDPSCTLNVEKM 120

Query: 121 IETRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180
           IETRIHTAR+LRK+LGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK
Sbjct: 121 IETRIHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 180

Query: 181 PEIEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISL 240
            EIEDC+R ++EINHVKWRPSV+ILKEEGID+SELK+T+PSTCP R KV ENGIFY ISL
Sbjct: 181 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKETSPSTCPERTKVKENGIFYTISL 240

Query: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNA+RG A  VTG
Sbjct: 241 EGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNALRGGAINVTG 290

[Close]

BLAST of Sed0001021 vs. TAIR 10
Match: AT1G54310.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 418.3 bits (1074), Expect = 6.0e-117
Identity = 208/289 (71.97%), Postives = 241/289 (83.39%), Query Frame = 0


Query: 3   QIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAVDR 62
           Q+  RL  S+  SSS        +IAS+ P+G+AKVVLKKGK QLFK GSPMVYSGAVDR
Sbjct: 25  QLPCRLHHSLFYSSS--------QIASSRPQGVAKVVLKKGKTQLFKDGSPMVYSGAVDR 84

Query: 63  IIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKLIE 122
           IIG+PPP+TGDVV+VADGTE PIGWGLYNS SMF VRLMQL+ E+ RDPSC L++EKL++
Sbjct: 85  IIGKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALNIEKLLQ 144

Query: 123 TRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKPE 182
           TRI  A QLRKSL LPSA+TNAYRLVNSEGDRLSGLI+DVFGD+AVVASSAAW+EKY+ E
Sbjct: 145 TRIAEAVQLRKSLALPSANTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRIE 204

Query: 183 IEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKVTENGIFYAISLEG 242
           +E C+R +D INH+ WRPS+++LKE+G D+S LK T  ST P R+ V ENGI YAISLEG
Sbjct: 205 VESCLRSIDGINHINWRPSLDVLKEDGFDISSLKQTQSSTLPQRSMVVENGISYAISLEG 264

Query: 243 QKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAVRGRATYVTG 292
           QKTGFY DQRENRHFISTIS G++VLDLCCYSGGF+LNA RG AT V G
Sbjct: 265 QKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGATSVIG 305

[Close]

BLAST of Sed0001021 vs. TAIR 10
Match: AT1G54310.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 313.2 bits (801), Expect = 2.7e-85
Identity = 157/227 (69.16%), Postives = 187/227 (82.38%), Query Frame = 0


Query: 3   QIQSRLIKSVCVSSSSPAATTIQEIASACPKGLAKVVLKKGKAQLFKAGSPMVYSGAVDR 62
           Q+  RL  S+  SSS        +IAS+ P+G+AKVVLKKGK QLFK GSPMVYSGAVDR
Sbjct: 8   QLPCRLHHSLFYSSS--------QIASSRPQGVAKVVLKKGKTQLFKDGSPMVYSGAVDR 67

Query: 63  IIGRPPPKTGDVVLVADGTEKPIGWGLYNSASMFSVRLMQLEEEAARDPSCTLDMEKLIE 122
           IIG+PPP+TGDVV+VADGTE PIGWGLYNS SMF VRLMQL+ E+ RDPSC L++EKL++
Sbjct: 68  IIGKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALNIEKLLQ 127

Query: 123 TRIHTARQLRKSLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKPE 182
           TRI  A QLRKSL LPSA+TNAYRLVNSEGDRLSGLI+DVFGD+AVVASSAAW+EKY+ E
Sbjct: 128 TRIAEAVQLRKSLALPSANTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRIE 187

Query: 183 IEDCIREMDEINHVKWRPSVEILKEEGIDMSELKDTNPSTCPGRAKV 230
           +E C+R +D INH+ WRPS+++LKE+G D+S LK T  ST P R+ V
Sbjct: 188 VESCLRSIDGINHINWRPSLDVLKEDGFDISSLKQTQSSTLPQRSMV 226

The following BLAST results are available for this feature:

BLAST of Sed0001021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901472.1	7.7e-143	89.35	ribosomal RNA large subunit methyltransferase I isoform X2 [Benincasa hispida]	[more]
XP_031743329.1	1.0e-142	89.35	uncharacterized protein LOC101215914 isoform X3 [Cucumis sativus]	[more]
XP_022985853.1	1.0e-142	89.69	uncharacterized protein LOC111483780 [Cucurbita maxima]	[more]
XP_004139905.1	1.0e-142	89.35	uncharacterized protein LOC101215914 isoform X1 [Cucumis sativus] >KGN46803.2 hy...	[more]
XP_011656973.1	1.0e-142	89.35	uncharacterized protein LOC101215914 isoform X2 [Cucumis sativus]	[more]

BLAST of Sed0001021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B4RRY8	1.5e-24	33.07	Ribosomal RNA large subunit methyltransferase I OS=Alteromonas mediterranea (str...	[more]
B2VDG5	1.4e-22	27.63	Ribosomal RNA large subunit methyltransferase I OS=Erwinia tasmaniensis (strain ...	[more]
Q3IKJ0	1.0e-20	28.63	Ribosomal RNA large subunit methyltransferase I OS=Pseudoalteromonas translucida...	[more]
A8AIB0	3.0e-20	27.71	Ribosomal RNA large subunit methyltransferase I OS=Citrobacter koseri (strain AT...	[more]
B1LJ30	3.9e-20	27.56	Ribosomal RNA large subunit methyltransferase I OS=Escherichia coli (strain SMS-...	[more]

BLAST of Sed0001021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEU3	4.9e-143	89.69	uncharacterized protein LOC111483780 OS=Cucurbita maxima OX=3661 GN=LOC111483780...	[more]
A0A6J1FRU8	1.1e-142	89.69	uncharacterized protein LOC111448241 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A1S3C2Z6	2.1e-141	88.32	ribosomal RNA large subunit methyltransferase I isoform X4 OS=Cucumis melo OX=36...	[more]
A0A1S3C2G7	2.1e-141	88.32	ribosomal RNA large subunit methyltransferase I isoform X3 OS=Cucumis melo OX=36...	[more]
A0A1S3C3K0	2.1e-141	88.32	ribosomal RNA large subunit methyltransferase I isoform X1 OS=Cucumis melo OX=36...	[more]

BLAST of Sed0001021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54310.2	6.0e-117	71.97	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT1G54310.1	2.7e-85	69.16	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 36..116 e-value: 6.3E-11 score: 52.3
IPR019614	S-adenosylmethionine-dependent methyltransferase	PFAM	PF10672	Methyltrans_SAM	coord: 226..289 e-value: 7.3E-6 score: 25.3
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 227..292 e-value: 6.8E-18 score: 66.7
None	No IPR available	GENE3D	3.30.750.80	RNA methyltransferase domain (HRMD) like	coord: 117..217 e-value: 2.3E-22 score: 80.9
None	No IPR available	PANTHER	PTHR42873	RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE	coord: 20..291
None	No IPR available	PROSITE	PS50890	PUA	coord: 35..91 score: 9.052991
None	No IPR available	CDD	cd11572	RlmI_M_like	coord: 120..214 e-value: 1.92276E-26 score: 99.074
IPR041532	RlmI, PUA-like domain	PFAM	PF17785	PUA_3	coord: 38..101 e-value: 4.6E-12 score: 45.6
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10	PUA domain	coord: 35..106 e-value: 4.5E-20 score: 72.9
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 123..291
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 37..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001021.1	Sed0001021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding